Cucsa.017020.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAAAAGAAAATAAGGAGCAAAATAGCACTTGAAAAAAAGATATTAGAAATGAAATGGATTTGTCGAAATGAAATTTGTCAGTGAAAGCATAGTGTGATTGATGAGAAGAGGGCGATAGACGAACTTTTTTGGAGCCGAAAATTGCAGTGAGTTTCACGTTTGATTGTTTGCTGGAGATTGCCGATTAGACAGGTATTCTACACCTTGAGATCTAATTTTACCCTTCATTCAAACTTCTTCTTTGGAGCTTCAGATTTTGTTTCCATTCAATTCACTCACTGAAGGATTCCCAAATTTGAAaCCCCATTtCCCCTTTTGATCTTCCCTCTTTTGTGGGTCATTTCGTTTCTCGTCCCTTCTTGGCTGCAGATTTTGTTGATTTTCTCTTGTGGGTATGGTCTATTTCTCTCTCACTCTCTTGATTAGTCAATTGTTTTGTCTTTTGATTTTTCATCTTCTGTTGATCAATGAATGATATTtCTTTTTGGATTTTCGTTTTTTGCTTTTGGTGGGTTCTTTTGGAATTTCTTTTGCTCTTCTGAAGTGATTGATGATTTGCTTGTTTCTTCTTTGGCACATCGTTTGAATGTCTTTGAGTACCGTTTTTCGATTATGTCTTCTTTGGTTGGAGCTAATTTACTCTTGTTGTTGATGTGATGTTGAAGCAGATATATTTTTTAATGTTGATTTGAATGCCTTTTGAGATTTTTAATTGAAGTGGGATTTGCTTTTGTTTGCTTTACAATGTTCGTGGATAACTTCTAATCTTAACTGAATCTTATCAACTGTGTGGGgTAGGGGGTGAAGATATAGGAAACATGAGAGTTAAGCAATAACACTGTCCTTTCAGAATTCGGGCTATGGTGTTGTTCCTTGAAACTGGCGCTTTGTGGTATAAGATTATGGTTAGAAAGTTATTCTCGTTGCATAGATGCCCATTTCGTTGGCAAGGGCATCGATAGAAATTTGTGGAAAATGATCCTCAATTATTTGCACCATTTTCTTCAATTTGTTACTCTTTCAAGTTTCTCGAAATAGACCCTTGGTGAATGCTTTTCTGACCTCTACCATATTTCCTTCCAAAAAACTCCTCCATTTCCGATTTCATCAATACATTGGATGCCTTGGCTCATATGATATCCATTTTAGAAAGGACCTTTTTTTTtGTATAAAGAAAGGACCTTATTTGATCCTAAGCTATTTAAACTTTATTGTATTGTCTTCCATTCAGGGAGTCTGTTCAGATCTATTTTTCAAGCATAAGCTTGTCTGGTCTCTTGATTCCTTAGATTTTTTCCTTGTCAAATCTTTATCTGGTCAGTTGCCACCACCAGTTTCATAATGCTTCTCCCTTGTTCACAAAACTAAGGAAAATTTTCATTCATAAGAAGGCAAAAGTTCTTTGCTTGGCATGTCTCTTGGAGGGTGGATTAATAGCTACAATGTCATCTAGTGATCTGTTCTTTTTTGTGTTTGTTGTATGCAAATGTGAGAATAAGGATTTAACTAAGTGTGGGAAATATAGCAATTTGTttttttAATAACTTGAAGAGTTTTGCAATTGTTCCCAGTTTAATTTGTCCCTTTGGGCTTTTGGTCCCAAGTTTTCTTTCTTGAGATTTTTCATTCTTTCCTTATAAGCTATTGGAGCCCCTTCCTGTAATTATTATTAGTTGTATATTTTTTAAGGCTCCTACATTTTGTTTCATGTTAGCAATTTGCTTTTCAGGAAACAGTTTAACCATTCCATTCTGTCTCATGAACTCGTTAAGAGTCTCCTTCTCCCCATACGATTCTGGGTGAATTGATTATGAAATTGATATTTCAGATTTTCAAAAAGAGGACAGGATTCATGCTTAGTTTTTAATATTTATTATCTACTTCTTACCAAAATAATAATAATAATAATAATAATAATAATAATAATTTATCCACTTAGAAAATAATCAACGCCAATCTGCCGGCACCCCGTTATTCTTATCATTTTTCTACTTTTTTCAGGTGATGATATGGTAACGAATTGTTAAATTACTTGATTCTTTTtCCTTTTATTCAGCGGCAAGTATTGAAGATCTTCAGTCCTTTGGAGAAACTTGCTTATCTAACAAAAACATGGTTCAGAAACTGCAACCCATCAAAGGTGGTGGAGGATCCGTTAAGGTTGGAGCCACTGGAACTATTAGCTCTCTAATGATGAGGGAATTAGAGTCAATGAGATCTGCCTCCAAGAAGCCGGTAACTTCCAAAAACAAATCTTCATCTGCTGCTACTACTACTACTGTTTCTTCTGCTGCTTCCATTCCTAAACGACTAGGACAAAGTAAATCGTTTGTAGAGGTAAGTGATAGAAGATATAATAGTGTTAATAACAGAAGCTTTGGGAACTCTCATAATGCTACTAAAACTGGTTCGAGGGATGTCCATCGAATGCCAATGCTTAGCTCTAATGATGTTTATACTGATGGAAATAGTTATAGAGAGAAACCAGAAAGGAAAGGACTTAGAGCAGTTGCAATTGTGGATGTAAAGTGCAATAACCCTGATAGAGCTTGGGCTAGCCGCCCTCTATCAAGTCGTCTCAGAAAACTCGGTTTTTCAAAGCTATCTGAAACCTTTGCTTGATTCACATCATACACGACTTCTAGGCTGCTTTCTATCTGAATCTTTGTTATTTAGGAGCTTGCTGCCCCCTCAAGGTTTCTTATAGTTAGTTATAGGGTTTCAAATGATGTATAGAAAGAATGTCGTGTAAGGCTGTAATGGACCTGGGAGGTCAGTAGTCTCATTGACCTGAAATCGATGATGCTATAACAGATGATACACTGCCTTGGATCCCCCTTCATCGGGAGGCTGGCTGTCATTCAGGTATCCTCTAGGTAATTTAGCTGGATTTTAGGCAATTTGGCCATTTCATTTCCTTAGTCTAAAGTGAAAGAAAGCTAGCTTGGCTTTATTATTTGATATGTTATATTTGTTCTCTTCCCATATTTGACATGTTTGTATCCAAAAC TGAAAAAGAAAATAAGGAGCAAAATAGCACTTGAAAAAAAGATATTAGAAATGAAATGGATTTGTCGAAATGAAATTTGTCAGTGAAAGCATAGTGTGATTGATGAGAAGAGGGCGATAGACGAACTTTTTTGGAGCCGAAAATTGCAGTGAGTTTCACGTTTGATTGTTTGCTGGAGATTGCCGATTAGACAGGTATTCTACACCTTGAGATCTAATTTTACCCTTCATTCAAACTTCTTCTTTGGAGCTTCAGATTTTGTTTCCATTCAATTCACTCACTGAAGGATTCCCAAATTTGAAACCCCATTTCCCCTTTTGATCTTCCCTCTTTTGTGGGTCATTTCGTTTCTCGTCCCTTCTTGGCTGCAGATTTTGTTGATTTTCTCTTGTGGGTGATGATATGGTAACGAATTGTTAAATTACTTGATTCTTTTTCCTTTTATTCAGCGGCAAGTATTGAAGATCTTCAGTCCTTTGGAGAAACTTGCTTATCTAACAAAAACATGGTTCAGAAACTGCAACCCATCAAAGGTGGTGGAGGATCCGTTAAGGTTGGAGCCACTGGAACTATTAGCTCTCTAATGATGAGGGAATTAGAGTCAATGAGATCTGCCTCCAAGAAGCCGGTAACTTCCAAAAACAAATCTTCATCTGCTGCTACTACTACTACTGTTTCTTCTGCTGCTTCCATTCCTAAACGACTAGGACAAAGTAAATCGTTTGTAGAGGTAAGTGATAGAAGATATAATAGTGTTAATAACAGAAGCTTTGGGAACTCTCATAATGCTACTAAAACTGGTTCGAGGGATGTCCATCGAATGCCAATGCTTAGCTCTAATGATGTTTATACTGATGGAAATAGTTATAGAGAGAAACCAGAAAGGAAAGGACTTAGAGCAGTTGCAATTGTGGATGTAAAGTGCAATAACCCTGATAGAGCTTGGGCTAGCCGCCCTCTATCAAGTCGTCTCAGAAAACTCGGTTTTTCAAAGCTATCTGAAACCTTTGCTTGATTCACATCATACACGACTTCTAGGCTGCTTTCTATCTGAATCTTTGTTATTTAGGAGCTTGCTGCCCCCTCAAGGTTTCTTATAGTTAGTTATAGGGTTTCAAATGATGTATAGAAAGAATGTCGTGTAAGGCTGTAATGGACCTGGGAGGTCAGTAGTCTCATTGACCTGAAATCGATGATGCTATAACAGATGATACACTGCCTTGGATCCCCCTTCATCGGGAGGCTGGCTGTCATTCAGGTATCCTCTAGGTAATTTAGCTGGATTTTAGGCAATTTGGCCATTTCATTTCCTTAGTCTAAAGTGAAAGAAAGCTAGCTTGGCTTTATTATTTGATATGTTATATTTGTTCTCTTCCCATATTTGACATGTTTGTATCCAAAAC ATGGTTCAGAAACTGCAACCCATCAAAGGTGGTGGAGGATCCGTTAAGGTTGGAGCCACTGGAACTATTAGCTCTCTAATGATGAGGGAATTAGAGTCAATGAGATCTGCCTCCAAGAAGCCGGTAACTTCCAAAAACAAATCTTCATCTGCTGCTACTACTACTACTGTTTCTTCTGCTGCTTCCATTCCTAAACGACTAGGACAAAGTAAATCGTTTGTAGAGGTAAGTGATAGAAGATATAATAGTGTTAATAACAGAAGCTTTGGGAACTCTCATAATGCTACTAAAACTGGTTCGAGGGATGTCCATCGAATGCCAATGCTTAGCTCTAATGATGTTTATACTGATGGAAATAGTTATAGAGAGAAACCAGAAAGGAAAGGACTTAGAGCAGTTGCAATTGTGGATGTAAAGTGCAATAACCCTGATAGAGCTTGGGCTAGCCGCCCTCTATCAAGTCGTCTCAGAAAACTCGGTTTTTCAAAGCTATCTGAAACCTTTGCTTGA MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATTTTVSSAASIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGNSYREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSETFA*
BLAST of Cucsa.017020.1 vs. TrEMBL
Match: A0A0A0LAQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G426360 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 1.2e-87 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1
BLAST of Cucsa.017020.1 vs. TrEMBL
Match: B9SAH6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0586940 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 4.7e-31 Identity = 81/167 (48.50%), Postives = 109/167 (65.27%), Query Frame = 1
BLAST of Cucsa.017020.1 vs. TrEMBL
Match: A0A061F5X8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030966 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 8.0e-31 Identity = 81/169 (47.93%), Postives = 111/169 (65.68%), Query Frame = 1
BLAST of Cucsa.017020.1 vs. TrEMBL
Match: A0A067L3L4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00847 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 3.0e-30 Identity = 80/168 (47.62%), Postives = 112/168 (66.67%), Query Frame = 1
BLAST of Cucsa.017020.1 vs. TrEMBL
Match: A0A0B2PW17_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_019911 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 5.7e-29 Identity = 82/169 (48.52%), Postives = 107/169 (63.31%), Query Frame = 1
BLAST of Cucsa.017020.1 vs. TAIR10
Match: AT5G54850.1 (AT5G54850.1 unknown protein) HSP 1 Score: 118.6 bits (296), Expect = 3.7e-27 Identity = 76/203 (37.44%), Postives = 111/203 (54.68%), Query Frame = 1
BLAST of Cucsa.017020.1 vs. NCBI nr
Match: gi|449462896|ref|XP_004149171.1| (PREDICTED: uncharacterized protein LOC101215948 [Cucumis sativus]) HSP 1 Score: 330.5 bits (846), Expect = 1.7e-87 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1
BLAST of Cucsa.017020.1 vs. NCBI nr
Match: gi|659109039|ref|XP_008454516.1| (PREDICTED: uncharacterized protein LOC103494914 isoform X1 [Cucumis melo]) HSP 1 Score: 322.4 bits (825), Expect = 4.8e-85 Identity = 166/170 (97.65%), Postives = 167/170 (98.24%), Query Frame = 1
BLAST of Cucsa.017020.1 vs. NCBI nr
Match: gi|659109041|ref|XP_008454517.1| (PREDICTED: uncharacterized protein LOC103494914 isoform X2 [Cucumis melo]) HSP 1 Score: 322.4 bits (825), Expect = 4.8e-85 Identity = 166/170 (97.65%), Postives = 167/170 (98.24%), Query Frame = 1
BLAST of Cucsa.017020.1 vs. NCBI nr
Match: gi|1009111006|ref|XP_015898740.1| (PREDICTED: uncharacterized protein LOC107432175 [Ziziphus jujuba]) HSP 1 Score: 145.6 bits (366), Expect = 8.0e-32 Identity = 77/167 (46.11%), Postives = 112/167 (67.07%), Query Frame = 1
BLAST of Cucsa.017020.1 vs. NCBI nr
Match: gi|1000957478|ref|XP_015577133.1| (PREDICTED: uncharacterized protein LOC8260804 [Ricinus communis]) HSP 1 Score: 142.5 bits (358), Expect = 6.7e-31 Identity = 81/167 (48.50%), Postives = 109/167 (65.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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