CsaV3_UNG230090.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGATGCATTTTGGGAACATAATACTTCTCTTCTCGATTGTATGGTTGGACTGTGCCTCAGGGGCATCGATTCCTTTATTCGTATGGGGACAACATCCTTCTTTGCAGTTATATGGTTCTCCATTCTTTCAACGATTGCCATGGTTGGATTTCTTAAATTCCTTGTTGTCTTGGTAAGCTCTTGAAATACTCTTGCATTGGTGTCACTTCCTATCTCGTTTTATCTTGTTTATGTGTAACAACATCCATGAGTTTTTTTTTTTTTTTTTTGTTTGGCTTGTCGGTGTTAGTGCTATTTTATGAGATCTTTGGTGTGAGAGAAACATCCACTGTTAAGAAGGGTGGAGAGGTCTAAAGGAGGATGTGTAGTCTCTCTTCAATAAAACGGAGGACGTAGTCCTTGTTAGGCTTCATATTTCCTTTGGGGCTTCAGCATATAAGTTTTTTGCTACTATCCTTAGTTCTCTTAGTTTACTTGATTGAAACCATTTTTTTATTGGGCTTCCTTTTGTTAATATTTTATTTCTATATGTCCATGTAATCTTTCATTTGTTCTCAATGAAAATTTAATTACTCTTAGAAAAGAAAGGCATCAACGAGTCGTTTGTCCTATGTTAGTTGTGTAGATTTGTGATACAGTTCCCAACTGGTGCAATGCTTTGTAGTTTGTATTACTTGATTGACAAATTTGATACAAAAAGGTGTTGGTATGAAATTGACTATTGAGATAGCCATGTATTGATTATGCTGAAATACCCCATGTTGACTCGTAAATAATTTATGGATCAGGTAGCAGCTGCTTCCTTGGAATTTTTGTCGGGTTTGCTTTTGCTATTTTGGTCATCGCCATCTCTGGAGCAGCTTTCCTTTGGTTCTACGGAAACTTTTGGATGACAATGCTGATTATCTTCCTTGGAGGTAATTTCTTTACCTTTGGAACGTGCACAATTTTTCCGTTTATGCCAACATCATGTCAAGGCTTATTCATTGAGGTATCACAACAATTTTCAGGATTGGCCTTTATATTGAGCCACGAAAGAGTTGCACTTTCGATCACCACTTTATATTCGGTTTATTGTGCATGGGTATGCACTGGATGGCTTGGTTTGCTTTTGGGCCTGAATTTGTCATTTATTTCAAGCGATGCACTGATTTATGTCCTAAAGAACAACATGAATGAGCATAGGAGATCAAACAGATATCCTGAACAAACAACTGGGATGCAAGATCAGTCTAGCTTCTCTCATGATGATCCATGCAGACATCATCTTCTGAATTTAGCGGAACAGGTTTTGCTGCTGATCGGTGTCCAGGCACACCCAACCAGTGGAGCTGATTCTGAGATATCTTCCGAAGATGAAGTTGTTCGTTTGCTGAATTGTTCAGATCACTATGCAGCTTTGGGATTGTCTCGGTATGAGAATATAGATACTTCCTACTCAAGAAGGAGTATAGGAAAAAGGTGA ATGGATGATGCATTTTGGGAACATAATACTTCTCTTCTCGATTGTATGGTTGGACTGTGCCTCAGGGGCATCGATTCCTTTATTCGTATGGGGACAACATCCTTCTTTGCAGTTATATGGTTCTCCATTCTTTCAACGATTGCCATGGTTGGATTTCTTAAATTCCTTGTTGTCTTGTTCCCAACTGGTGCAATGCTTTGTAGTTTGTATTACTTGATTGACAAATTTGATACAAAAAGCAGCTGCTTCCTTGGAATTTTTGTCGGGTTTGCTTTTGCTATTTTGGTCATCGCCATCTCTGGAGCAGCTTTCCTTTGGTTCTACGGAAACTTTTGGATGACAATGCTGATTATCTTCCTTGGAGGATTGGCCTTTATATTGAGCCACGAAAGAGTTGCACTTTCGATCACCACTTTATATTCGGTTTATTGTGCATGGGTATGCACTGGATGGCTTGGTTTGCTTTTGGGCCTGAATTTGTCATTTATTTCAAGCGATGCACTGATTTATGTCCTAAAGAACAACATGAATGAGCATAGGAGATCAAACAGATATCCTGAACAAACAACTGGGATGCAAGATCAGTCTAGCTTCTCTCATGATGATCCATGCAGACATCATCTTCTGAATTTAGCGGAACAGGTTTTGCTGCTGATCGGTGTCCAGGCACACCCAACCAGTGGAGCTGATTCTGAGATATCTTCCGAAGATGAAGTTGTTCGTTTGCTGAATTGTTCAGATCACTATGCAGCTTTGGGATTGTCTCGGTATGAGAATATAGATACTTCCTACTCAAGAAGGAGTATAGGAAAAAGGTGA ATGGATGATGCATTTTGGGAACATAATACTTCTCTTCTCGATTGTATGGTTGGACTGTGCCTCAGGGGCATCGATTCCTTTATTCGTATGGGGACAACATCCTTCTTTGCAGTTATATGGTTCTCCATTCTTTCAACGATTGCCATGGTTGGATTTCTTAAATTCCTTGTTGTCTTGTTCCCAACTGGTGCAATGCTTTGTAGTTTGTATTACTTGATTGACAAATTTGATACAAAAAGCAGCTGCTTCCTTGGAATTTTTGTCGGGTTTGCTTTTGCTATTTTGGTCATCGCCATCTCTGGAGCAGCTTTCCTTTGGTTCTACGGAAACTTTTGGATGACAATGCTGATTATCTTCCTTGGAGGATTGGCCTTTATATTGAGCCACGAAAGAGTTGCACTTTCGATCACCACTTTATATTCGGTTTATTGTGCATGGGTATGCACTGGATGGCTTGGTTTGCTTTTGGGCCTGAATTTGTCATTTATTTCAAGCGATGCACTGATTTATGTCCTAAAGAACAACATGAATGAGCATAGGAGATCAAACAGATATCCTGAACAAACAACTGGGATGCAAGATCAGTCTAGCTTCTCTCATGATGATCCATGCAGACATCATCTTCTGAATTTAGCGGAACAGGTTTTGCTGCTGATCGGTGTCCAGGCACACCCAACCAGTGGAGCTGATTCTGAGATATCTTCCGAAGATGAAGTTGTTCGTTTGCTGAATTGTTCAGATCACTATGCAGCTTTGGGATTGTCTCGGTATGAGAATATAGATACTTCCTACTCAAGAAGGAGTATAGGAAAAAGGTGA MDDAFWEHNTSLLDCMVGLCLRGIDSFIRMGTTSFFAVIWFSILSTIAMVGFLKFLVVLFPTGAMLCSLYYLIDKFDTKSSCFLGIFVGFAFAILVIAISGAAFLWFYGNFWMTMLIIFLGGLAFILSHERVALSITTLYSVYCAWVCTGWLGLLLGLNLSFISSDALIYVLKNNMNEHRRSNRYPEQTTGMQDQSSFSHDDPCRHHLLNLAEQVLLLIGVQAHPTSGADSEISSEDEVVRLLNCSDHYAALGLSRYENIDTSYSRRSIGKR
BLAST of CsaV3_UNG230090.1 vs. NCBI nr
Match: XP_008458322.1 (PREDICTED: uncharacterized protein LOC103497773 [Cucumis melo]) HSP 1 Score: 280.8 bits (717), Expect = 5.0e-72 Identity = 191/261 (73.18%), Postives = 198/261 (75.86%), Query Frame = 0
BLAST of CsaV3_UNG230090.1 vs. NCBI nr
Match: XP_004148820.2 (PREDICTED: uncharacterized protein LOC101205292 [Cucumis sativus] >KGN47442.1 hypothetical protein Csa_6G324860 [Cucumis sativus]) HSP 1 Score: 275.0 bits (702), Expect = 2.7e-70 Identity = 190/261 (72.80%), Postives = 197/261 (75.48%), Query Frame = 0
BLAST of CsaV3_UNG230090.1 vs. NCBI nr
Match: XP_022138479.1 (uncharacterized protein LOC111009645 [Momordica charantia]) HSP 1 Score: 265.8 bits (678), Expect = 1.6e-67 Identity = 152/260 (58.46%), Postives = 166/260 (63.85%), Query Frame = 0
BLAST of CsaV3_UNG230090.1 vs. NCBI nr
Match: XP_022959130.1 (uncharacterized protein LOC111460216 [Cucurbita moschata]) HSP 1 Score: 265.8 bits (678), Expect = 1.6e-67 Identity = 151/261 (57.85%), Postives = 169/261 (64.75%), Query Frame = 0
BLAST of CsaV3_UNG230090.1 vs. NCBI nr
Match: XP_023548281.1 (uncharacterized protein LOC111806957 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 265.0 bits (676), Expect = 2.8e-67 Identity = 151/261 (57.85%), Postives = 168/261 (64.37%), Query Frame = 0
BLAST of CsaV3_UNG230090.1 vs. TAIR10
Match: AT5G49580.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 153.3 bits (386), Expect = 2.2e-37 Identity = 96/262 (36.64%), Postives = 132/262 (50.38%), Query Frame = 0
BLAST of CsaV3_UNG230090.1 vs. TAIR10
Match: AT1G79030.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 62.0 bits (149), Expect = 6.6e-10 Identity = 65/284 (22.89%), Postives = 119/284 (41.90%), Query Frame = 0
BLAST of CsaV3_UNG230090.1 vs. TAIR10
Match: AT1G16680.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 55.8 bits (133), Expect = 4.7e-08 Identity = 58/276 (21.01%), Postives = 111/276 (40.22%), Query Frame = 0
BLAST of CsaV3_UNG230090.1 vs. TrEMBL
Match: tr|A0A1S3C7K6|A0A1S3C7K6_CUCME (uncharacterized protein LOC103497773 OS=Cucumis melo OX=3656 GN=LOC103497773 PE=4 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 3.3e-72 Identity = 191/261 (73.18%), Postives = 198/261 (75.86%), Query Frame = 0
BLAST of CsaV3_UNG230090.1 vs. TrEMBL
Match: tr|A0A0A0KGB7|A0A0A0KGB7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G324860 PE=4 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 1.8e-70 Identity = 190/261 (72.80%), Postives = 197/261 (75.48%), Query Frame = 0
BLAST of CsaV3_UNG230090.1 vs. TrEMBL
Match: tr|A0A2N9EIH6|A0A2N9EIH6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2447 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 1.1e-56 Identity = 133/260 (51.15%), Postives = 154/260 (59.23%), Query Frame = 0
BLAST of CsaV3_UNG230090.1 vs. TrEMBL
Match: tr|A0A2I4DPT5|A0A2I4DPT5_9ROSI (uncharacterized protein LOC108982291 OS=Juglans regia OX=51240 GN=LOC108982291 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 1.3e-55 Identity = 128/252 (50.79%), Postives = 153/252 (60.71%), Query Frame = 0
BLAST of CsaV3_UNG230090.1 vs. TrEMBL
Match: tr|F6H706|F6H706_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0077g00580 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 4.0e-54 Identity = 131/266 (49.25%), Postives = 158/266 (59.40%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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