CsaV3_7G024420.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTCAATTTTGAGACTATCATTTTTATTCTATATAACATTCCTCCTTAATTAATTATAATATTATATTCATGCTTCACATTCAAGTTTTGTAGTTTTAATATTATCTTTTCTAACAGGAAGAAATATAAATAAATATTTTCATCGGTCATAGAGATTGCAATCTCAATTTCATAGAACAAGAAAAAGAGAGAGAGAGAGAGAGAAGGCGGCCTTTGACGCGAGACAACAGAAACCTTTCTTCTCCCTTAAGCATTCATCTTCTTCAACCATTCAGGTTTCAAATCCAATACACACATTTCTAATTCTCTCCTTTACCTCCTATATTATATCATTCCAAACTTCTAATGGCCAATTTGAATATTTCTCTCCTTTTTCTCTTCTCAATTTCTCTGAATTTCCATCTCTCTTCTACAGCAATGTCCTCCCAATCCGCTTCCATTCCCCTTGTATCCAGCTTCGATTCACCGGCTGTGCATATCGTTTACACCGAGCGGCCTCACAACGAAGAACCTGAAGCCTATCATATCCGAACCCTAGTTTCGGTTCTTGGCAGGTCCGTCTTATTCTTTGTGTTCTGTATCTGGTCAACGTTGAAATTGGCGATGAATTTTTGTTTAATTTTTTTATTTGCAGTGAAGAAGCTGCTAGGGAGGCTCTTGTGTATAGTTATAAGAATGCTGCTAGTGGATTCTCTGCTCGCCTAACGCCCGATCAGGTTACGGAGATTACCAGTAAGTCCTGCTCTTAACATTTTCTGATTAATTGTTCGTTCTATCAATTGTTGTGAATATAAGAATTTGGGGATGGAAGATCATGATTCATGTGGAATAGGTGATGATATATATGTTGAGCATGTTGTGATCTCTACTTTTCTTGTTATGATAGGGTGTAGTGTAGTTGTGATTTTGTAACATTCGTGTGATGATTTTTTGCCTGGTAATTTGGGGTTAAACTAAAATTCTTGCACTCTCAAGCTTCATGATACTTGATGTTGATGTTGATCATAGTGGGATGTCCACGGGCGGGGTGGGGTTGAGGATGCTTTCTCCATTCCCTCTGCACTGTCCCATTTCATTCAAAATCCTCACGAAATTCTCTACGAATTTTACGGGGACCGAATTCCCCACGTGAATTTTTTAGACCTAATACTAAAATTCTCAAATTTTGCTATATTTATAAAATATATTAATCTTTATTTTTTTATTTATAAAACAATTTAACAATTAAACATTTATTTTATACTAAGTATTTCTTTGGGTTAACTTTACTAATTAATTTTTAAAAAATAATAAAATAAATTAAAATATTTAAAAAACGTAGTAAAATTTTGGATTCTATTAAGGATAACTATTGATAGACTTAAATGCCTATCCATGTCTATTATTTATAAAATTTAAAAACTCTGTTTTTGCTATATTTATAAAGAAGTGGGTCATTTTGCTATTTGTGAAAAAAAAAGCCCGGGAAGGTATGTGTTAACTAATTATTATTCTTTTGATTCTTTCAAATTAATTAATATTATTAAAATTAATGATGATTGATTAATTTTTATGGGTGAAAAAGAGATGTTAAAGTTTAAATTTTGAAAAGAAATCTCAAATTTGATAAGAAATTGTAACTGTTTATAACTGTTTGAAATGAACTATTTTTAAATTTTAAATACCAAATAAAAAGTAGATCTAAAATTTAGATTCCAAAAAGATAGTTTTTCTTATTAATATTAGAGAAATTGTGAAAAATGATAGAATTGACAAAAATTTTACAAATTAAGAGCAACGAGTCTTTGTCATTTGATTTTTTTGACACCAATAGTAGATAGTTTTTGTTTTTTGTTTTTTGTTTTTTTTTTAATTTATTATTCTTAAAAAACCCATTTTATTTATATTGACATGTTTTAATTAGAGAATGAGCCCCATGTGCTGATGCCTTAGGTCATGGATCGTCAAGATATTAAATAAGATCTTCATGTGACTAATTAAGGCATACATGGTGGGTTAAAATTATTCATTATACTCAAATGATCATAACAGTTCTATGAGTTTGTTTTTTTTTGTTTTTTTAGTTCTCCAACGTGTGAGAGTCAAAATATAAACCTTGCTCAATTAGCATATAATAGTATATACGTGTTAGTGATCGAGAAGTTGATGGTATAATTACTCAAACGTTTTTTAGGGTAGGGTTTTTGATCCTGATCGAAGTATCGGTTTAGGACAATGTTGTAATAAGTTCTAATTTTGCTATGCTCTGGTCATCTTGTTTTACGTTAAGTTTCAGATTTCCTATTCTTAAACCTCCATCTAATCATTTTAATCTCCAAGTTTCATACCATACTTCATAACCATTTAATTTTGAAGATTAAAGGCTCATTTGAGTTGCCTATGAAAAATTAATTTTTCAAAAAATAAATCTCTCTCGATAAAATCGATTTAAAATATATTTCATCAACTATTTTGAGTGGTTGTCAAACACTTTAATTTCTTTTCAAAATGACTTATATTTTAAACTACACTGGAGAATGTATATCAAATAAGTTTATAAACACTACTCCCATTTATTTATTTCTTTGTTTTTCTTATCTACCTTTTACAAGTGTTTTAGAAAACTAAACCAAGTTTTGAAAGCTAGTTGGAAAAAAAAAAAGATTTTGAAGAATTGTTTTTGTTTGTAATTTGGTTATGAGTTCTGAGTCTTTAGTCAGGCAAGACAAAAACATGGGATAAAGAAGTTGAAAAAAGAAACATAATTTCCTAAAACATTTAGATTTTGATATTATTAGAAGTGAAATCTTGTACATAAATCAAAATAGGTTATGTTGTATGTTTTAATCTAGTCATTATCATTAATACTCATTTTAAGAAAATTTTAAAATTTATATTTATGAGTGTTTGAGTCAAACTTATGCGTGCATCTATTTTGATCTTTTGGAACAAACTGTTTGATCCTATAACATTTGAAAAAAAATTATGTTCAATATTAATTTCGTAGAAGGTAGTTACTTTAAATTGAATTGAATCAATCACCTCACTTTTGATGTAATGTCTCTCTTTTACCACTTGATCAATTCAGAAGCATTTGTAAAATATGTATCGGATTTCCATAGCATCAATCAATATCTGATATTTCTCATAATTGTCGATAATGCGTTGGTATTAATCTCAGAATGTGTTTCCTATGTAACCTTTTTTATCTTGAAACTTGGTAGAACAACCTGGAGTTTTACATGTTGTCCAAAGCGGTAACAATAAGCTGCATTCTGGAGGAGGTGGAGTAGCAAGACTTCACTAGATCAACAACACGTCAGATTCTCTCTCCAAATACATATATACATATATATATTATATATATATATCGGTTTGTTGCCTAAATAAAGTGTGGTTCCTGTTCACTGGCATTATACTAATGACTCAAATTTGCATTTGTGTGGCTAAATACTTCTGCTTCTGCCTTTTGGCAACTGACAATTAAGCCAATGATTTGCCTTTGCTTGATGGGCAATTTAGTCTTCCAAAAATTCCATCCTTCATGTATGGAAATACTTCTACTTTTGTTGTATTGAAATATTATTTATTTTAATGATTAAATTGTTAAGTGTAATTGGTAACTTTTAAATACTTCTTTGAGTTCTTCCATATGACATGGAATATGAAAAAGATAATTATTGTGTGGAGAAAATTATTCTTAGAAATATGAAAGATAAAATGTAATTTTCTAGAGAGTCTATTTCCTAGGTGATTAATTAGTGTTTTTCTAGAGTTATTTATTGACACATGTAACAAATTTTTAAATTCCAATGGTTAGTTTTGTTTTCTTGTTACATTCTCTTGTAAAACACCTAACATAAAAGGTGTGTATTGAGGCTTGTTTTCATCTCAGCTTTCTTCAATTCTATGCCTGATAGAAATCTCCATCATTGAGGGTAATTAATTTTCTGCAAAAAGTTGACTCCAACCAAAGTGCAATAAAGAAGGTTGACGTAGCCTCATCTTCATCTCATTCTTCCTAACTCAAGAAGATATTTTATCTTGTTTGTGGACTTCTCTACCTCCACCTGGCTAATACAAATCATAACACAAAAATAGCCGAACAACACCTATAAATTAAATAGAGGTGTCGTCTACCCTTTGTAACCAAGAAACTAAGAAAGCTCCCATTGAACCTAGGTGCCAAAGCAATCAATAGAAGAGCATGTTGGGTCCAACCAATTTGGTATAAGAGCCATC ATGTCCTCCCAATCCGCTTCCATTCCCCTTGTATCCAGCTTCGATTCACCGGCTGTGCATATCGTTTACACCGAGCGGCCTCACAACGAAGAACCTGAAGCCTATCATATCCGAACCCTAGTTTCGGTTCTTGGCAGTGAAGAAGCTGCTAGGGAGGCTCTTGTGTATAGTTATAAGAATGCTGCTAGTGGATTCTCTGCTCGCCTAACGCCCGATCAGGTTACGGAGATTACCAAACAACCTGGAGTTTTACATGTTGTCCAAAGCGGTAACAATAAGCTGCATTCTGGAGGAGGTGGAGTAGCAAGACTTCACTAG ATGTCCTCCCAATCCGCTTCCATTCCCCTTGTATCCAGCTTCGATTCACCGGCTGTGCATATCGTTTACACCGAGCGGCCTCACAACGAAGAACCTGAAGCCTATCATATCCGAACCCTAGTTTCGGTTCTTGGCAGTGAAGAAGCTGCTAGGGAGGCTCTTGTGTATAGTTATAAGAATGCTGCTAGTGGATTCTCTGCTCGCCTAACGCCCGATCAGGTTACGGAGATTACCAAACAACCTGGAGTTTTACATGTTGTCCAAAGCGGTAACAATAAGCTGCATTCTGGAGGAGGTGGAGTAGCAAGACTTCACTAG MSSQSASIPLVSSFDSPAVHIVYTERPHNEEPEAYHIRTLVSVLGSEEAAREALVYSYKNAASGFSARLTPDQVTEITKQPGVLHVVQSGNNKLHSGGGGVARLH
BLAST of CsaV3_7G024420.1 vs. NCBI nr
Match: XP_004139693.1 (PREDICTED: subtilisin-like protease SBT3.3 isoform X2 [Cucumis sativus] >KGN44449.1 hypothetical protein Csa_7G291690 [Cucumis sativus]) HSP 1 Score: 206.8 bits (525), Expect = 3.5e-50 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. NCBI nr
Match: XP_004139694.1 (PREDICTED: subtilisin-like protease SBT3.5 isoform X1 [Cucumis sativus]) HSP 1 Score: 206.8 bits (525), Expect = 3.5e-50 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. NCBI nr
Match: XP_008461445.1 (PREDICTED: subtilisin-like protease SBT3.6 isoform X2 [Cucumis melo]) HSP 1 Score: 198.0 bits (502), Expect = 1.6e-47 Identity = 100/105 (95.24%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. NCBI nr
Match: XP_022935862.1 (subtilisin-like protease SBT3.13 isoform X1 [Cucurbita moschata]) HSP 1 Score: 190.7 bits (483), Expect = 2.6e-45 Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. NCBI nr
Match: XP_022935863.1 (subtilisin-like protease SBT3.6 isoform X2 [Cucurbita moschata] >XP_022935864.1 subtilisin-like protease SBT3.6 isoform X2 [Cucurbita moschata]) HSP 1 Score: 190.7 bits (483), Expect = 2.6e-45 Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. TAIR10
Match: AT1G71950.1 (Proteinase inhibitor, propeptide) HSP 1 Score: 118.6 bits (296), Expect = 2.3e-27 Identity = 56/82 (68.29%), Postives = 69/82 (84.15%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. TAIR10
Match: AT4G10550.3 (Subtilase family protein) HSP 1 Score: 63.2 bits (152), Expect = 1.1e-10 Identity = 34/79 (43.04%), Postives = 49/79 (62.03%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. TAIR10
Match: AT5G11940.1 (Subtilase family protein) HSP 1 Score: 62.0 bits (149), Expect = 2.5e-10 Identity = 31/77 (40.26%), Postives = 50/77 (64.94%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. TAIR10
Match: AT1G32960.1 (Subtilase family protein) HSP 1 Score: 60.8 bits (146), Expect = 5.7e-10 Identity = 32/79 (40.51%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. TAIR10
Match: AT1G32940.1 (Subtilase family protein) HSP 1 Score: 60.5 bits (145), Expect = 7.4e-10 Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. Swiss-Prot
Match: sp|Q8L7I2|SBT36_ARATH (Subtilisin-like protease SBT3.6 OS=Arabidopsis thaliana OX=3702 GN=SBT3.6 PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.1e-09 Identity = 34/79 (43.04%), Postives = 49/79 (62.03%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. Swiss-Prot
Match: sp|Q1PDX5|SBT3B_ARATH (Subtilisin-like protease SBT3.11 OS=Arabidopsis thaliana OX=3702 GN=SBT3.11 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 4.6e-09 Identity = 31/77 (40.26%), Postives = 50/77 (64.94%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. Swiss-Prot
Match: sp|Q9MAP5|SBT33_ARATH (Subtilisin-like protease SBT3.3 OS=Arabidopsis thaliana OX=3702 GN=SBT3.3 PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.0e-08 Identity = 32/79 (40.51%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. Swiss-Prot
Match: sp|Q9MAP7|SBT35_ARATH (Subtilisin-like protease SBT3.5 OS=Arabidopsis thaliana OX=3702 GN=SBT3.5 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.3e-08 Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. Swiss-Prot
Match: sp|F4HPF1|SBT34_ARATH (Subtilisin-like protease SBT3.4 OS=Arabidopsis thaliana OX=3702 GN=SBT3.4 PE=3 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.7e-08 Identity = 30/72 (41.67%), Postives = 47/72 (65.28%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. TrEMBL
Match: tr|A0A0A0K6B0|A0A0A0K6B0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G291690 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 2.3e-50 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. TrEMBL
Match: tr|A0A1S3CF48|A0A1S3CF48_CUCME (subtilisin-like protease SBT3.6 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500039 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.1e-47 Identity = 100/105 (95.24%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. TrEMBL
Match: tr|A0A1S3CEN1|A0A1S3CEN1_CUCME (subtilisin-like protease SBT3.6 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500039 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 2.3e-45 Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. TrEMBL
Match: tr|A0A0A0K993|A0A0A0K993_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G276180 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.2e-35 Identity = 83/93 (89.25%), Postives = 83/93 (89.25%), Query Frame = 0
BLAST of CsaV3_7G024420.1 vs. TrEMBL
Match: tr|A0A1S3CH88|A0A1S3CH88_CUCME (subtilisin-like protease SBT3.11 OS=Cucumis melo OX=3656 GN=LOC103500440 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 3.6e-35 Identity = 81/93 (87.10%), Postives = 83/93 (89.25%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
|