CsaV3_7G006060.1 (mRNA) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G006060.1
TypemRNA
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionprotein SHI RELATED SEQUENCE 1
Locationchr7 : 3658819 .. 3660507 (+)
Sequence length954
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAGATCTACTGTGTGTTAGTAAAGTAAATAATGATGAATTAAATCCCTCTCTCCTCTCTCTTCTCTCTCTTCTCTCTCTTCTCTCTAAACCCCCCAAAACTTTTTCTTTTTCCTTTGCAAAAGAAAAAGGAAAGAATCCCAAATCCCTCTGTATTTTATAGAGTAGTATGAGTGAGTGTGTGTGTTGGTTTAGTTGTGTTAAATGATCAGAGCAAATCCCGGCAGTATTAAAGACGACGGCATTTTCAGGCCATATTCTTCCAAAATATTCCACCGGTAACCCATAACCTAACCCTCTTTCTTAATTTCTTCTTTCACTTTCAACTTTTATCCCTACAAAATTAATAAATTTCTAAAATTTAACCTACAGATTTTTTTGCAGGGCCTTTGAAGTATATATAAAGTCATTAGCCAAATTAAGATTGGTATAGAGAAAAATTAAGTTGAAGAAAGTATGAGAGGGTTGTTGTATTTAGGTGGGAAACAAGAGGAAGATGAAGAAGAAAGTCTAAGATCAGGAAGAGAACAACAATTGTTTTTGTATAGTACAAACAATAACAATAACAATGAAGAGATCTACTCCAAGGGATTGGAGATTTGGCCTCAACAAAATGTGGAGAACTACATTTCCTTTGGAGTTGTGGGTCCTACTAGGAAGAACTTGATCATCAACGCCTCCGATCATGAGTTCGTTTCCAGATTAGGGTTTTCGATGATGAGAGGAGGATCAGGTGGTGGTGGTGGGATGAATTGTCAAGATTGTGGGAATCAAGCTAAGAAAGATTGTTCTCATTTGAGGTGCAGGACTTGTTGTAAGAGTCGAGGGTTTCAATGCCAAACCCATGTTAAGAGTACTTGGGTTCCGGCTGCTAAGCGACGGGAACGACAACAACAACGTCATCAGATTTTTCAGAACCATCGTCGACAACAATCTCAAGCAAATCAATCAGATCAAACCACTCTCAAAAGACTTGGAGAAAATCAGCCACTTCTTGCAACTCCTACTGTTACTTCAGGTAAATTAAACAAATAAATAAGCTTAAGCCGATGGTTTACGGTAAAATTTATTATGATTATTATTATTATTTTTAAGTTCAAACAAACATGGGGTTGGGATGGAGGTGGGGATGATTTGGACCTCGAACTCAATGATGTAATGGCTTAGATTGGTGGAGATGATTGCTTTGAGTGTTTGTTCTAATCAATGTGGTTCTGAATTAAATTAGGGTTACAAGTTGCACATTTTCCAGCTGAATTCAATTCCCCAGCTAATTTCCGGTGTGTAAAAGTCAGTGCCATTGACAACGTTGAAGAACAATTAGCTTATCAAACATCAGTGAACGTTGGTGGCCATATGTTCAAAGGCATTCTTTACGACCACGGTCCCGAAAGCAGTCAAAATATGAGTATCGATATTGGTGGCGAGAGCTCATACTGCCACAGGGGAGAAGACGACAGTCAACTGCTCGATCTCGTGATTGGAGCATCCAACGGGAGCGGGAGAGTTAGCCAATCATCATCATCTGCCCCATTTGTGGAATCTTCACTGTATCCTATCCCAATCAACCACACATACAACAACGCCGGTACGCAATTTTTTCCATCCACAAGAACCTAACAAAAATGGAGATTCTTAATTAAACTAGAAAAAGAAAAACTTCTCCATTTTATGATGTGTTGAATGAACA

mRNA sequence

ATGAGAGGGTTGTTGTATTTAGGTGGGAAACAAGAGGAAGATGAAGAAGAAAGTCTAAGATCAGGAAGAGAACAACAATTGTTTTTGTATAGTACAAACAATAACAATAACAATGAAGAGATCTACTCCAAGGGATTGGAGATTTGGCCTCAACAAAATGTGGAGAACTACATTTCCTTTGGAGTTGTGGGTCCTACTAGGAAGAACTTGATCATCAACGCCTCCGATCATGAGTTCGTTTCCAGATTAGGGTTTTCGATGATGAGAGGAGGATCAGGTGGTGGTGGTGGGATGAATTGTCAAGATTGTGGGAATCAAGCTAAGAAAGATTGTTCTCATTTGAGGTGCAGGACTTGTTGTAAGAGTCGAGGGTTTCAATGCCAAACCCATGTTAAGAGTACTTGGGTTCCGGCTGCTAAGCGACGGGAACGACAACAACAACGTCATCAGATTTTTCAGAACCATCGTCGACAACAATCTCAAGCAAATCAATCAGATCAAACCACTCTCAAAAGACTTGGAGAAAATCAGCCACTTCTTGCAACTCCTACTGTTACTTCAGGGTTACAAGTTGCACATTTTCCAGCTGAATTCAATTCCCCAGCTAATTTCCGGTGTGTAAAAGTCAGTGCCATTGACAACGTTGAAGAACAATTAGCTTATCAAACATCAGTGAACGTTGGTGGCCATATGTTCAAAGGCATTCTTTACGACCACGGTCCCGAAAGCAGTCAAAATATGAGTATCGATATTGGTGGCGAGAGCTCATACTGCCACAGGGGAGAAGACGACAGTCAACTGCTCGATCTCGTGATTGGAGCATCCAACGGGAGCGGGAGAGTTAGCCAATCATCATCATCTGCCCCATTTGTGGAATCTTCACTGTATCCTATCCCAATCAACCACACATACAACAACGCCGGTACGCAATTTTTTCCATCCACAAGAACCTAA

Coding sequence (CDS)

ATGAGAGGGTTGTTGTATTTAGGTGGGAAACAAGAGGAAGATGAAGAAGAAAGTCTAAGATCAGGAAGAGAACAACAATTGTTTTTGTATAGTACAAACAATAACAATAACAATGAAGAGATCTACTCCAAGGGATTGGAGATTTGGCCTCAACAAAATGTGGAGAACTACATTTCCTTTGGAGTTGTGGGTCCTACTAGGAAGAACTTGATCATCAACGCCTCCGATCATGAGTTCGTTTCCAGATTAGGGTTTTCGATGATGAGAGGAGGATCAGGTGGTGGTGGTGGGATGAATTGTCAAGATTGTGGGAATCAAGCTAAGAAAGATTGTTCTCATTTGAGGTGCAGGACTTGTTGTAAGAGTCGAGGGTTTCAATGCCAAACCCATGTTAAGAGTACTTGGGTTCCGGCTGCTAAGCGACGGGAACGACAACAACAACGTCATCAGATTTTTCAGAACCATCGTCGACAACAATCTCAAGCAAATCAATCAGATCAAACCACTCTCAAAAGACTTGGAGAAAATCAGCCACTTCTTGCAACTCCTACTGTTACTTCAGGGTTACAAGTTGCACATTTTCCAGCTGAATTCAATTCCCCAGCTAATTTCCGGTGTGTAAAAGTCAGTGCCATTGACAACGTTGAAGAACAATTAGCTTATCAAACATCAGTGAACGTTGGTGGCCATATGTTCAAAGGCATTCTTTACGACCACGGTCCCGAAAGCAGTCAAAATATGAGTATCGATATTGGTGGCGAGAGCTCATACTGCCACAGGGGAGAAGACGACAGTCAACTGCTCGATCTCGTGATTGGAGCATCCAACGGGAGCGGGAGAGTTAGCCAATCATCATCATCTGCCCCATTTGTGGAATCTTCACTGTATCCTATCCCAATCAACCACACATACAACAACGCCGGTACGCAATTTTTTCCATCCACAAGAACCTAA

Protein sequence

MRGLLYLGGKQEEDEEESLRSGREQQLFLYSTNNNNNNEEIYSKGLEIWPQQNVENYISFGVVGPTRKNLIINASDHEFVSRLGFSMMRGGSGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIFQNHRRQQSQANQSDQTTLKRLGENQPLLATPTVTSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYDHGPESSQNMSIDIGGESSYCHRGEDDSQLLDLVIGASNGSGRVSQSSSSAPFVESSLYPIPINHTYNNAGTQFFPSTRT
Homology
[Close]
BLAST of CsaV3_7G006060.1 vs. NCBI nr
Match: XP_004137039.1 (PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis sativus] >KGN43665.1 hypothetical protein Csa_7G051450 [Cucumis sativus])

HSP 1 Score: 511.5 bits (1316), Expect = 2.0e-141
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0 

Query: 1   MRGLLYLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYSKGLEIWPQQNVENYISF 60
           MRGLLYLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYSKGLEIWPQQNVENYISF
Sbjct: 1   MRGLLYLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYSKGLEIWPQQNVENYISF 60

Query: 61  GVVGPTRKNLIINASDHEFVSRLGFSMMRGGSXXXXXMNCQDCGNQAKKDCSHLRCRTCC 120
           GVVGPTRKNLIINASDHEFVSRLGFSMMRGGSXXXXXMNCQDCGNQAKKDCSHLRCRTCC
Sbjct: 61  GVVGPTRKNLIINASDHEFVSRLGFSMMRGGSXXXXXMNCQDCGNQAKKDCSHLRCRTCC 120

Query: 121 KSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXSDQTTLKRLGENQPLL 180
           KSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXSDQTTLKRLGENQPLL
Sbjct: 121 KSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXSDQTTLKRLGENQPLL 180

Query: 181 ATPTVTSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYDHG 240
           ATPTVTSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYDHG
Sbjct: 181 ATPTVTSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYDHG 240

Query: 241 PESSQNMSIDIGGESSYCHRGEDDSQLLDLVIGASNGSGRVSQSSSSAPFVESSLYPIPI 300
           PESSQNMSIDIGGESSYCHRGEDDSQLLDLVIGASNGSGRVSQSSSSAPFVESSLYPIPI
Sbjct: 241 PESSQNMSIDIGGESSYCHRGEDDSQLLDLVIGASNGSGRVSQSSSSAPFVESSLYPIPI 300

Query: 301 NHTYNNAGTQFFPSTRT 318
           NHTYNNAGTQFFPSTRT
Sbjct: 301 NHTYNNAGTQFFPSTRT 317

[Close]
BLAST of CsaV3_7G006060.1 vs. NCBI nr
Match: XP_008455259.1 (PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis melo])

HSP 1 Score: 467.2 bits (1201), Expect = 4.3e-128
Identity = 299/319 (93.73%), Postives = 303/319 (94.98%), Query Frame = 0 

Query: 1   MRGLLYLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYSKGLEIWPQQNVENYISF 60
           MRGLLYLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYSKGLEIWPQQNVENYISF
Sbjct: 1   MRGLLYLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYSKGLEIWPQQNVENYISF 60

Query: 61  GVVGPTRKNLIINASDHEFVSRLGFSM-MRGGSXXXXXMNCQDCGNQAKKDCSHLRCRTC 120
           GVVGPTRKNLIINASDHE VSRLGFSM      XXXXXMNCQDCGNQAKKDCSHLRCRTC
Sbjct: 61  GVVGPTRKNLIINASDHELVSRLGFSMXXXXXXXXXXXMNCQDCGNQAKKDCSHLRCRTC 120

Query: 121 CKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXSDQTTLKRLGENQPL 180
           CKSRGFQCQTHVKSTWVPAAKRRE XXXXXXXXXXXXXXXXXX  SDQTTLKR GENQPL
Sbjct: 121 CKSRGFQCQTHVKSTWVPAAKRRERXXXXXXXXXXXXXXXXXXNQSDQTTLKRYGENQPL 180

Query: 181 LATPTVTSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYDH 240
           LATPTVTSGL+VAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVN+GGHMFKGILYDH
Sbjct: 181 LATPTVTSGLEVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDH 240

Query: 241 GPESSQNMSIDIGGE-SSYCHRGEDDSQLLDLVIGASNGSGRVSQSSSSAPFVESSLYPI 300
           GPE+SQNMSIDIGGE SSYCH GEDDSQ LDLVIGASNGSGRVSQSSSSAPFVESSLYPI
Sbjct: 241 GPETSQNMSIDIGGESSSYCHGGEDDSQPLDLVIGASNGSGRVSQSSSSAPFVESSLYPI 300

Query: 301 PINHTY-NNAGTQFFPSTR 317
           PIN+TY NN GTQFFPSTR
Sbjct: 301 PINNTYNNNTGTQFFPSTR 319

[Close]
BLAST of CsaV3_7G006060.1 vs. NCBI nr
Match: XP_022981873.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022981874.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima])

HSP 1 Score: 344.4 bits (882), Expect = 4.3e-91
Identity = 206/285 (72.28%), Postives = 223/285 (78.25%), Query Frame = 0 

Query: 41  IYSKGLEIWPQ-----QNVENYISFGVVGPTRKNLIINASDHEFVSRLGFSMMRGGS--- 100
           IYSKGLEIWPQ     Q VENYISFG VGP+R NL+INASDHE      F+MMR G+   
Sbjct: 35  IYSKGLEIWPQYGQQHQAVENYISFG-VGPSRMNLMINASDHE------FTMMRQGAXXX 94

Query: 101 XXXXXMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXX 160
           XXXXX+NCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRR XXXXXXXX 
Sbjct: 95  XXXXXINCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRXXXXXXXXXF 154

Query: 161 XXXXXXXXXXXXSDQTTLKRLGENQPLLATPTVTSGLQVAHFPAEFNSPANFRCVKVSAI 220
                        DQTT K   E QP +   TVTSGL++AHFPAEFNSPA FRCVKVSAI
Sbjct: 155 RPDQF--------DQTTHKCHRETQPSIPPATVTSGLELAHFPAEFNSPAVFRCVKVSAI 214

Query: 221 DNVEEQLAYQTSVNVGGHMFKGILYDHGPESSQNMSIDIGGESSYCHRGEDDSQLLDLVI 280
           DNVEEQLAYQT+VN+GGHMFKGILYDHGPE+SQN+S   GGESSY H G+DD Q LDLVI
Sbjct: 215 DNVEEQLAYQTAVNIGGHMFKGILYDHGPETSQNLS--TGGESSYSHGGDDDGQGLDLVI 274

Query: 281 GASNGSGRVSQSSSSAPFVESSLYPIPINHTYNNAGTQFFPSTRT 318
           GASN  GRV+ S+S   FVESSLYPIPIN T+   G Q FPS+RT
Sbjct: 275 GASNSFGRVNPSAS---FVESSLYPIPIN-TF-TPGMQNFPSSRT 297

[Close]
BLAST of CsaV3_7G006060.1 vs. NCBI nr
Match: XP_022940027.1 (protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita moschata] >XP_022940028.1 protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 339.0 bits (868), Expect = 1.8e-89
Identity = 204/285 (71.58%), Postives = 221/285 (77.54%), Query Frame = 0 

Query: 41  IYSKGLEIWPQ-----QNVENYISFGVVGPTRKNLIINASDHEFVSRLGFSMMRGGS--- 100
           IYSKGLEIWPQ     Q VENYISFG VGP+R NL+INASDHE      F+MMR G+   
Sbjct: 35  IYSKGLEIWPQYGQQHQAVENYISFG-VGPSRMNLMINASDHE------FTMMRQGAXXX 94

Query: 101 XXXXXMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXX 160
           XXXXX+NCQDCGNQAKKDC+HLRCRTCCKSRGF CQTHVKSTWVPAAK   XXXXXXXXX
Sbjct: 95  XXXXXINCQDCGNQAKKDCTHLRCRTCCKSRGFHCQTHVKSTWVPAAKXXXXXXXXXXXX 154

Query: 161 XXXXXXXXXXXXSDQTTLKRLGENQPLLATPTVTSGLQVAHFPAEFNSPANFRCVKVSAI 220
                        DQTT KR  E QP +    VTSGL++AHFPAEFNSPA FRCVKVSAI
Sbjct: 155 FRPDQF-------DQTTPKRHRETQPSIPPAAVTSGLELAHFPAEFNSPAVFRCVKVSAI 214

Query: 221 DNVEEQLAYQTSVNVGGHMFKGILYDHGPESSQNMSIDIGGESSYCHRGEDDSQLLDLVI 280
           DNVEEQLAYQT+VN+GGHMFKGILYDHGPESSQN+S   GGESSY H G+DD Q LDLVI
Sbjct: 215 DNVEEQLAYQTAVNIGGHMFKGILYDHGPESSQNLS--TGGESSYSHGGDDDGQGLDLVI 274

Query: 281 GASNGSGRVSQSSSSAPFVESSLYPIPINHTYNNAGTQFFPSTRT 318
           GASN  GRV+ S+S   FVESSLYPIPIN T+   G Q FPS+RT
Sbjct: 275 GASNSFGRVNPSAS---FVESSLYPIPIN-TF-TPGMQNFPSSRT 298

[Close]
BLAST of CsaV3_7G006060.1 vs. NCBI nr
Match: XP_022967615.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima])

HSP 1 Score: 338.6 bits (867), Expect = 2.3e-89
Identity = 185/277 (66.79%), Postives = 204/277 (73.65%), Query Frame = 0 

Query: 43  SKGLEIWPQQNVENYISFGVVGPTRKNLIINASD--HEFVSRLGFSMMRGGSXXXXXMNC 102
           SKGLEIWPQQN+ENYISFG VGP+R+N +INASD   +FV RLGFS           +NC
Sbjct: 27  SKGLEIWPQQNLENYISFG-VGPSRRNFMINASDGHDQFVPRLGFS-----------INC 86

Query: 103 QDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXX 162
           QDCGNQAKKDCSHLRCRTCCKSRGF CQTHVKSTWVPA KRRE                 
Sbjct: 87  QDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRE----RQLQRHQIVRQQS 146

Query: 163 XXXXSDQTTLKRLGENQPLLATPTVTSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLA 222
                DQTT KR GENQ L   P  TSGL+V +FPAEFNS A FRCVKVSAID+VEEQLA
Sbjct: 147 RLDRPDQTTSKRHGENQSLCVAPIDTSGLEVVNFPAEFNSSAVFRCVKVSAIDDVEEQLA 206

Query: 223 YQTSVNVGGHMFKGILYDHGPESSQNMSIDIGGESSYCHRGEDDSQLLDLVIGASNGSGR 282
           YQTSVN+GG MFKGILYD GP+S+ N+S   GGESSYC+ GEDDSQ L+LVIGASNG  R
Sbjct: 207 YQTSVNIGGRMFKGILYDQGPKSTLNLS--TGGESSYCYGGEDDSQALELVIGASNGGWR 266

Query: 283 VSQSSSSAPFVESSLYPIPINHTYNNAGTQFFPSTRT 318
              S+   PF+ESSLYPIPIN T+   GTQ FPS+RT
Sbjct: 267 ---SNKPTPFMESSLYPIPIN-TF-TTGTQNFPSSRT 280

[Close]
BLAST of CsaV3_7G006060.1 vs. TAIR10
Match: AT1G19790.1 (SHI-related sequence 7)

HSP 1 Score: 179.1 bits (453), Expect = 4.3e-45
Identity = 122/312 (39.10%), Postives = 159/312 (50.96%), Query Frame = 0 

Query: 43  SKGLEIWPQQNV------------ENYISFGVV---------GPTRKNLIIN-ASDHEFV 102
           +KG EI+P                 N  SFG+V           T ++L  N  SDHE V
Sbjct: 43  NKGFEIFPXXXXXXXXXXXXXXXPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPV 102

Query: 103 --SRLGFSMMRGGSXXXXXMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPA 162
             S  GF++ R G+     MNCQDCGNQAKKDC H+RCRTCCKSRGF CQTHVKSTWV A
Sbjct: 103 RSSTGGFTVTRQGN-----MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSA 162

Query: 163 AKRREXXXXXXXXXXXXXXXXXXXXXSDQTTLKRLGENQPLL----------ATPTVTSG 222
           AKRRE                   XX                               +SG
Sbjct: 163 AKRRERQAQLAVLPAKRIRDANSRXXXXXXXXXXXXXXXXXXXXXXXXXCTRVVNASSSG 222

Query: 223 LQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYDHGPESSQN-M 282
           L+ +H P E +SPA FRC++VS+ID+ +E+ AYQT+V++GGH+FKGILYD GP S  +  
Sbjct: 223 LETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRY 282

Query: 283 SIDIGGESSYCHRGEDDSQLLDLVIGASNGSGRVSQSSSSAPFVESSLY---PIPINHTY 317
           S  + GE+S+ H       L+D    A+  +   + ++++     SSLY     P N  +
Sbjct: 283 SSSLNGETSHQHH----LNLMDSTPSAATTNAVTAVNTNNGSIDPSSLYTAVATPFN-AF 342

[Close]
BLAST of CsaV3_7G006060.1 vs. TAIR10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related)

HSP 1 Score: 163.3 bits (412), Expect = 2.4e-40
Identity = 82/152 (53.95%), Postives = 104/152 (68.42%), Query Frame = 0 

Query: 98  MNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXX 157
           ++CQDCGNQAKKDCSH+RCRTCCKSRGF+C THV+STWVPAAKRRE              
Sbjct: 142 VSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRE------RQQQLATV 201

Query: 158 XXXXXXXSDQTTLKRLGENQPLLATPTVT------SGLQVAHFPAEFNSPANFRCVKVSA 217
                    ++  KR  EN P  ++  V       SGL+V +FPAE +S A FRCV+VS+
Sbjct: 202 QPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSSSAVFRCVRVSS 261

Query: 218 IDNVEEQLAYQTSVNVGGHMFKGILYDHGPES 244
           +++ EE+ AYQT+V++GGH+FKGILYD GP S
Sbjct: 262 VEDGEEEFAYQTAVSIGGHIFKGILYDLGPGS 287

[Close]
BLAST of CsaV3_7G006060.1 vs. TAIR10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related)

HSP 1 Score: 162.2 bits (409), Expect = 5.4e-40
Identity = 109/270 (40.37%), Postives = 142/270 (52.59%), Query Frame = 0 

Query: 63  VGPTRKNLIINASDHEFVSRLGFSMMRGGSXXXXXMNCQDCGNQAKKDCSHLRCRTCCKS 122
           VGP+ ++LI  +            MMR GS      +CQDCGNQ+KK  SH+RCRTCCKS
Sbjct: 91  VGPSNRSLIETSGG-------ALMMMRSGSGSGGP-SCQDCGNQSKKXXSHMRCRTCCKS 150

Query: 123 RGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXSDQTTLKRLGENQPLLAT 182
           RG  C THVKSTWVPAAKRRE                        +  KR  E  P  +T
Sbjct: 151 RGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLGG--------SVPKRQRERIPARST 210

Query: 183 PTV--------TSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKG 242
                      TSGL+V +FP E +S A FRCV+VS++D+ EE+ AY+T+V++GGH+FKG
Sbjct: 211 SMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKG 270

Query: 243 ILYDHGPESSQNMSIDIGGESSYCHRGEDDSQLLDLVIGASNGSGRVS-----QSSSSAP 302
           +LYD GP            E S    G     L+     AS+ S  VS       S+S  
Sbjct: 271 VLYDQGP-----------AERSSSGGGSQPLNLITAGPSASSSSPNVSCNNGVVGSTSDH 330

Query: 303 FVE--SSLYPIPINHTYNNAGTQFFPSTRT 318
           +++  S  YP PIN T+   GT FF ++R+
Sbjct: 331 YIDPASLNYPTPIN-TF-MTGTHFFSNSRS 331

[Close]
BLAST of CsaV3_7G006060.1 vs. TAIR10
Match: AT1G75520.1 (SHI-related sequence 5)

HSP 1 Score: 157.1 bits (396), Expect = 1.7e-38
Identity = 107/194 (55.15%), Postives = 122/194 (62.89%), Query Frame = 0 

Query: 75  SDHEFVSRLGFSMMRGGSXXXXXMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKST 134
           SDHE     GF++ R G      MNCQDCGNQAKKDC H+RCRTCCKSRGF CQTHVKST
Sbjct: 108 SDHE---PGGFTVTRQGG-----MNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKST 167

Query: 135 WVPAAKRRE---------XXXXXXXXXXXXXXXXXXXXXSDQTTLKRLGENQPLLATPTV 194
           WVPAAKRRE                XXXXXXXXXXXXXX               LA   V
Sbjct: 168 WVPAAKRRERLAQLASLQHHSASSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANTRV 227

Query: 195 -----TSGLQVA-HFPAEFNSPANFRCVKVSAI--DNVEEQLAYQTSVNVGGHMFKGILY 252
                 SGL+V+ H P E NSPA FRCV+VS+I  D  ++  AYQT+VN+GGH+FKGILY
Sbjct: 228 VNANSNSGLEVSQHLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILY 287

[Close]
BLAST of CsaV3_7G006060.1 vs. TAIR10
Match: AT2G21400.1 (SHI-related sequence3)

HSP 1 Score: 140.6 bits (353), Expect = 1.7e-33
Identity = 70/145 (48.28%), Postives = 93/145 (64.14%), Query Frame = 0 

Query: 100 CQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXX 159
           C+DCGNQAKKDC ++RCRTCCKS+ F CQTH+KSTWVPA +R                  
Sbjct: 9   CEDCGNQAKKDCVYMRCRTCCKSKAFHCQTHIKSTWVPAYRRSHHKH------------- 68

Query: 160 XXXXXSDQTTLKRLGENQPLLATPTVTSGLQV----AHFPAEFNSPANFRCVKVSAIDNV 219
                          ++QPL  + ++  G+Q+     HFPAE +S A+FRCVKVS+ID+ 
Sbjct: 69  ---------------QSQPL--STSIPKGVQIHTTPGHFPAELSSLADFRCVKVSSIDDG 123

Query: 220 EEQLAYQTSVNVGGHMFKGILYDHG 241
           +EQ AYQT+VN+GGH+F+GIL+D G
Sbjct: 129 KEQYAYQTTVNIGGHVFRGILHDQG 123

[Close]
BLAST of CsaV3_7G006060.1 vs. Swiss-Prot
Match: sp|Q9FXH7|SRS7_ARATH (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 7.7e-44
Identity = 122/312 (39.10%), Postives = 159/312 (50.96%), Query Frame = 0 

Query: 43  SKGLEIWPQQNV------------ENYISFGVV---------GPTRKNLIIN-ASDHEFV 102
           +KG EI+P                 N  SFG+V           T ++L  N  SDHE V
Sbjct: 43  NKGFEIFPXXXXXXXXXXXXXXXPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPV 102

Query: 103 --SRLGFSMMRGGSXXXXXMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPA 162
             S  GF++ R G+     MNCQDCGNQAKKDC H+RCRTCCKSRGF CQTHVKSTWV A
Sbjct: 103 RSSTGGFTVTRQGN-----MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSA 162

Query: 163 AKRREXXXXXXXXXXXXXXXXXXXXXSDQTTLKRLGENQPLL----------ATPTVTSG 222
           AKRRE                   XX                               +SG
Sbjct: 163 AKRRERQAQLAVLPAKRIRDANSRXXXXXXXXXXXXXXXXXXXXXXXXXCTRVVNASSSG 222

Query: 223 LQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYDHGPESSQN-M 282
           L+ +H P E +SPA FRC++VS+ID+ +E+ AYQT+V++GGH+FKGILYD GP S  +  
Sbjct: 223 LETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRY 282

Query: 283 SIDIGGESSYCHRGEDDSQLLDLVIGASNGSGRVSQSSSSAPFVESSLY---PIPINHTY 317
           S  + GE+S+ H       L+D    A+  +   + ++++     SSLY     P N  +
Sbjct: 283 SSSLNGETSHQHH----LNLMDSTPSAATTNAVTAVNTNNGSIDPSSLYTAVATPFN-AF 342

[Close]
BLAST of CsaV3_7G006060.1 vs. Swiss-Prot
Match: sp|Q9SD40|SRS1_ARATH (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 4.4e-39
Identity = 82/152 (53.95%), Postives = 104/152 (68.42%), Query Frame = 0 

Query: 98  MNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXX 157
           ++CQDCGNQAKKDCSH+RCRTCCKSRGF+C THV+STWVPAAKRRE              
Sbjct: 142 VSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRE------RQQQLATV 201

Query: 158 XXXXXXXSDQTTLKRLGENQPLLATPTVT------SGLQVAHFPAEFNSPANFRCVKVSA 217
                    ++  KR  EN P  ++  V       SGL+V +FPAE +S A FRCV+VS+
Sbjct: 202 QPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSSSAVFRCVRVSS 261

Query: 218 IDNVEEQLAYQTSVNVGGHMFKGILYDHGPES 244
           +++ EE+ AYQT+V++GGH+FKGILYD GP S
Sbjct: 262 VEDGEEEFAYQTAVSIGGHIFKGILYDLGPGS 287

[Close]
BLAST of CsaV3_7G006060.1 vs. Swiss-Prot
Match: sp|Q9XGX0|SHI_ARATH (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.8e-39
Identity = 109/270 (40.37%), Postives = 142/270 (52.59%), Query Frame = 0 

Query: 63  VGPTRKNLIINASDHEFVSRLGFSMMRGGSXXXXXMNCQDCGNQAKKDCSHLRCRTCCKS 122
           VGP+ ++LI  +            MMR GS      +CQDCGNQ+KK  SH+RCRTCCKS
Sbjct: 91  VGPSNRSLIETSGG-------ALMMMRSGSGSGGP-SCQDCGNQSKKXXSHMRCRTCCKS 150

Query: 123 RGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXSDQTTLKRLGENQPLLAT 182
           RG  C THVKSTWVPAAKRRE                        +  KR  E  P  +T
Sbjct: 151 RGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLGG--------SVPKRQRERIPARST 210

Query: 183 PTV--------TSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKG 242
                      TSGL+V +FP E +S A FRCV+VS++D+ EE+ AY+T+V++GGH+FKG
Sbjct: 211 SMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKG 270

Query: 243 ILYDHGPESSQNMSIDIGGESSYCHRGEDDSQLLDLVIGASNGSGRVS-----QSSSSAP 302
           +LYD GP            E S    G     L+     AS+ S  VS       S+S  
Sbjct: 271 VLYDQGP-----------AERSSSGGGSQPLNLITAGPSASSSSPNVSCNNGVVGSTSDH 330

Query: 303 FVE--SSLYPIPINHTYNNAGTQFFPSTRT 318
           +++  S  YP PIN T+   GT FF ++R+
Sbjct: 331 YIDPASLNYPTPIN-TF-MTGTHFFSNSRS 331

[Close]
BLAST of CsaV3_7G006060.1 vs. Swiss-Prot
Match: sp|Q9LQZ5|SRS5_ARATH (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.1e-37
Identity = 107/194 (55.15%), Postives = 122/194 (62.89%), Query Frame = 0 

Query: 75  SDHEFVSRLGFSMMRGGSXXXXXMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKST 134
           SDHE     GF++ R G      MNCQDCGNQAKKDC H+RCRTCCKSRGF CQTHVKST
Sbjct: 108 SDHE---PGGFTVTRQGG-----MNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKST 167

Query: 135 WVPAAKRRE---------XXXXXXXXXXXXXXXXXXXXXSDQTTLKRLGENQPLLATPTV 194
           WVPAAKRRE                XXXXXXXXXXXXXX               LA   V
Sbjct: 168 WVPAAKRRERLAQLASLQHHSASSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANTRV 227

Query: 195 -----TSGLQVA-HFPAEFNSPANFRCVKVSAI--DNVEEQLAYQTSVNVGGHMFKGILY 252
                 SGL+V+ H P E NSPA FRCV+VS+I  D  ++  AYQT+VN+GGH+FKGILY
Sbjct: 228 VNANSNSGLEVSQHLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILY 287

[Close]
BLAST of CsaV3_7G006060.1 vs. Swiss-Prot
Match: sp|Q9SJT8|SRS3_ARATH (Protein SHI RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=SRS3 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.0e-32
Identity = 70/145 (48.28%), Postives = 93/145 (64.14%), Query Frame = 0 

Query: 100 CQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXX 159
           C+DCGNQAKKDC ++RCRTCCKS+ F CQTH+KSTWVPA +R                  
Sbjct: 9   CEDCGNQAKKDCVYMRCRTCCKSKAFHCQTHIKSTWVPAYRRSHHKH------------- 68

Query: 160 XXXXXSDQTTLKRLGENQPLLATPTVTSGLQV----AHFPAEFNSPANFRCVKVSAIDNV 219
                          ++QPL  + ++  G+Q+     HFPAE +S A+FRCVKVS+ID+ 
Sbjct: 69  ---------------QSQPL--STSIPKGVQIHTTPGHFPAELSSLADFRCVKVSSIDDG 123

Query: 220 EEQLAYQTSVNVGGHMFKGILYDHG 241
           +EQ AYQT+VN+GGH+F+GIL+D G
Sbjct: 129 KEQYAYQTTVNIGGHVFRGILHDQG 123

[Close]
BLAST of CsaV3_7G006060.1 vs. TrEMBL
Match: tr|A0A0A0K1X2|A0A0A0K1X2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G051450 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 1.3e-141
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0 

Query: 1   MRGLLYLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYSKGLEIWPQQNVENYISF 60
           MRGLLYLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYSKGLEIWPQQNVENYISF
Sbjct: 1   MRGLLYLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYSKGLEIWPQQNVENYISF 60

Query: 61  GVVGPTRKNLIINASDHEFVSRLGFSMMRGGSXXXXXMNCQDCGNQAKKDCSHLRCRTCC 120
           GVVGPTRKNLIINASDHEFVSRLGFSMMRGGSXXXXXMNCQDCGNQAKKDCSHLRCRTCC
Sbjct: 61  GVVGPTRKNLIINASDHEFVSRLGFSMMRGGSXXXXXMNCQDCGNQAKKDCSHLRCRTCC 120

Query: 121 KSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXSDQTTLKRLGENQPLL 180
           KSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXSDQTTLKRLGENQPLL
Sbjct: 121 KSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXSDQTTLKRLGENQPLL 180

Query: 181 ATPTVTSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYDHG 240
           ATPTVTSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYDHG
Sbjct: 181 ATPTVTSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYDHG 240

Query: 241 PESSQNMSIDIGGESSYCHRGEDDSQLLDLVIGASNGSGRVSQSSSSAPFVESSLYPIPI 300
           PESSQNMSIDIGGESSYCHRGEDDSQLLDLVIGASNGSGRVSQSSSSAPFVESSLYPIPI
Sbjct: 241 PESSQNMSIDIGGESSYCHRGEDDSQLLDLVIGASNGSGRVSQSSSSAPFVESSLYPIPI 300

Query: 301 NHTYNNAGTQFFPSTRT 318
           NHTYNNAGTQFFPSTRT
Sbjct: 301 NHTYNNAGTQFFPSTRT 317

[Close]
BLAST of CsaV3_7G006060.1 vs. TrEMBL
Match: tr|A0A1S3C0M5|A0A1S3C0M5_CUCME (protein SHI RELATED SEQUENCE 1 OS=Cucumis melo OX=3656 GN=LOC103495466 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 2.9e-128
Identity = 299/319 (93.73%), Postives = 303/319 (94.98%), Query Frame = 0 

Query: 1   MRGLLYLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYSKGLEIWPQQNVENYISF 60
           MRGLLYLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYSKGLEIWPQQNVENYISF
Sbjct: 1   MRGLLYLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYSKGLEIWPQQNVENYISF 60

Query: 61  GVVGPTRKNLIINASDHEFVSRLGFSM-MRGGSXXXXXMNCQDCGNQAKKDCSHLRCRTC 120
           GVVGPTRKNLIINASDHE VSRLGFSM      XXXXXMNCQDCGNQAKKDCSHLRCRTC
Sbjct: 61  GVVGPTRKNLIINASDHELVSRLGFSMXXXXXXXXXXXMNCQDCGNQAKKDCSHLRCRTC 120

Query: 121 CKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXXXXXXXXXXXXXSDQTTLKRLGENQPL 180
           CKSRGFQCQTHVKSTWVPAAKRRE XXXXXXXXXXXXXXXXXX  SDQTTLKR GENQPL
Sbjct: 121 CKSRGFQCQTHVKSTWVPAAKRRERXXXXXXXXXXXXXXXXXXNQSDQTTLKRYGENQPL 180

Query: 181 LATPTVTSGLQVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYDH 240
           LATPTVTSGL+VAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVN+GGHMFKGILYDH
Sbjct: 181 LATPTVTSGLEVAHFPAEFNSPANFRCVKVSAIDNVEEQLAYQTSVNIGGHMFKGILYDH 240

Query: 241 GPESSQNMSIDIGGE-SSYCHRGEDDSQLLDLVIGASNGSGRVSQSSSSAPFVESSLYPI 300
           GPE+SQNMSIDIGGE SSYCH GEDDSQ LDLVIGASNGSGRVSQSSSSAPFVESSLYPI
Sbjct: 241 GPETSQNMSIDIGGESSSYCHGGEDDSQPLDLVIGASNGSGRVSQSSSSAPFVESSLYPI 300

Query: 301 PINHTY-NNAGTQFFPSTR 317
           PIN+TY NN GTQFFPSTR
Sbjct: 301 PINNTYNNNTGTQFFPSTR 319

[Close]
BLAST of CsaV3_7G006060.1 vs. TrEMBL
Match: tr|A0A1S3CRF2|A0A1S3CRF2_CUCME (protein SHI RELATED SEQUENCE 3 OS=Cucumis melo OX=3656 GN=LOC103503903 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.3e-84
Identity = 192/288 (66.67%), Postives = 215/288 (74.65%), Query Frame = 0 

Query: 41  IYSKGLEIWPQ----------QNVENYISFGVVGPTRKNLIINASDHEFVSRLGFSMMR- 100
           IYSK  +IWPQ          QNVENYISFGV    R +L+INA DH+FVSR GF+M R 
Sbjct: 39  IYSKEFQIWPQYYSHNHHLPNQNVENYISFGVGPSRRSSLMINAFDHDFVSRSGFTMTRH 98

Query: 101 GGSXXXXXMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXX 160
              XXXXXMNCQDCGNQAKKDCSHLRCRTCCKSRGF CQTHVKSTWVPAAKRRE      
Sbjct: 99  SXXXXXXXMNCQDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPAAKRRE------ 158

Query: 161 XXXXXXXXXXXXXXXSDQTTLKRLGENQPLLATPTVTSGLQVAHFPAEFNSPANFRCVKV 220
              XXXXXX      SDQT  K    NQP L TPT+TSGL++ +F  EFNS A FRCVKV
Sbjct: 159 -RQXXXXXXLRADQSSDQTVPKIHRANQPSL-TPTITSGLELGNFQGEFNSSAVFRCVKV 218

Query: 221 SAIDNVEEQLAYQTSVNVGGHMFKGILYDHGPESSQNMSIDIGGESSYCHRGEDDSQLLD 280
           SAIDNVEEQLAYQT+VN+GGHMFKGILYD GPE++Q +++  GG+      GE+D Q LD
Sbjct: 219 SAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPENNQ-INLSSGGD------GENDGQGLD 278

Query: 281 LVIGASNGSGRVSQSSSSAPFVESSLYPIPINHTYNNAGTQFFPSTRT 318
           LVIGASN SGRV  ++ S PFVESSLYPIPIN ++NN  TQFFPS+RT
Sbjct: 279 LVIGASNCSGRV--NNQSTPFVESSLYPIPIN-SFNNC-TQFFPSSRT 307

[Close]
BLAST of CsaV3_7G006060.1 vs. TrEMBL
Match: tr|A0A0A0LDI9|A0A0A0LDI9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G865400 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.4e-79
Identity = 189/289 (65.40%), Postives = 207/289 (71.63%), Query Frame = 0 

Query: 41  IYSKGLEIWPQ-----------QNVENYISFGVVGPTRKNLIINASDHEFVSRLGFSMMR 100
           I SK  +IWPQ           QNVENYISFGV    R +L+INA DH+FVSR GF+M +
Sbjct: 39  ICSKEFQIWPQYYSHHNQHPPHQNVENYISFGVGPSRRSSLMINAFDHDFVSRSGFTMTK 98

Query: 101 -GGSXXXXXMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXX 160
             G      MNCQDCGNQAKKDCSHLRCRTCCKSRGF CQTHVKSTWVPAAK        
Sbjct: 99  HSGGGRGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPAAK-------- 158

Query: 161 XXXXXXXXXXXXXXXXSDQTTLKRLGENQPLLATPTVTSGLQVAHFPAEFNSPANFRCVK 220
               XXXXXXXXXXXX  QT  K   EN P L T T TSGL+  +F  EFNS A FRCVK
Sbjct: 159 ----XXXXXXXXXXXXXXQTVPKIHRENPPSL-TVTTTSGLEHGNFQGEFNSSAVFRCVK 218

Query: 221 VSAIDNVEEQLAYQTSVNVGGHMFKGILYDHGPESSQNMSIDIGGESSYCHRGEDDSQLL 280
           VSAIDNVEEQLAYQT+VN+GGHMFKGILYD GPE SQN+S   GG+      GED  + L
Sbjct: 219 VSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPEYSQNLS--TGGD------GEDGGEGL 278

Query: 281 DLVIGASNGSGRVSQSSSSAPFVESSLYPIPINHTYNNAGTQFFPSTRT 318
           DLVIGASNGSGRV  ++ S PFVESSLYPIPIN ++NN G QFFPS+RT
Sbjct: 279 DLVIGASNGSGRV--NNQSTPFVESSLYPIPIN-SFNN-GMQFFPSSRT 302

[Close]
BLAST of CsaV3_7G006060.1 vs. TrEMBL
Match: tr|E6NU70|E6NU70_JATCU (JHL18I08.14 protein OS=Jatropha curcas OX=180498 GN=JHL18I08.14 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.4e-58
Identity = 173/296 (58.45%), Postives = 199/296 (67.23%), Query Frame = 0 

Query: 41  IYSKGLEIWP-----QQNVENYISFGVVGPTRKNLIINASDHEFVSRLGFSMMRGG--SX 100
           IY+KG EIWP     QQN+ NY SFG VGP+R++     SD    SR GF++MR G   X
Sbjct: 38  IYNKGFEIWPQYYHQQQNMNNYSSFG-VGPSRRSF----SDES--SRSGFTVMRQGGLGX 97

Query: 101 XXXXMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRREXXXXXXXXXX 160
           XXXXMNCQDCGNQAKKDC+HLRCRTCCKSRGFQCQTHVKSTWVPA     XXXXXXXXXX
Sbjct: 98  XXXXMNCQDCGNQAKKDCAHLRCRTCCKSRGFQCQTHVKSTWVPAXXXXXXXXXXXXXXX 157

Query: 161 XXXXXXXXXXXSDQTTL----KRLGENQ---PLLATP---TVTSGLQVAHFPAEFNSPAN 220
           XXXXXXXXXXX          KR  ENQ   P LA     T TSGL+VAHFP E NSPA 
Sbjct: 158 XXXXXXXXXXXXXXXXXGENPKRQRENQGGAPSLACTRLGTTTSGLEVAHFPPEVNSPAV 217

Query: 221 FRCVKVSAIDNVEEQLAYQTSVNVGGHMFKGILYDHGPESSQNMSIDIGGESSYCHRGED 280
           FRCVKVSA+D+ +EQ AYQT+VN+GGHMF+G+LYD GP+S        GGESS       
Sbjct: 218 FRCVKVSAMDDADEQFAYQTAVNIGGHMFRGLLYDQGPDSRYTS----GGESS-----SG 277

Query: 281 DSQLLDLVIGASNGSGRV--SQSSSSAPFVESSLYPIPINHTYNNAGTQFFPSTRT 318
            +Q L+L+  A+  +     +Q  + A    SSLYP P+N     AGTQFFP  R+
Sbjct: 278 GAQQLNLITAATTSTEATPSNQQGTGALIDPSSLYPAPLNAFI--AGTQFFPPPRS 315

The following BLAST results are available for this feature:
BLAST of CsaV3_7G006060.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004137039.12.0e-141100.00PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis sativus] >KGN43665.1 hyp... [more]
XP_008455259.14.3e-12893.73PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis melo][more]
XP_022981873.14.3e-9172.28protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022981874.1 protein S... [more]
XP_022940027.11.8e-8971.58protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita moschata] >XP_02294002... [more]
XP_022967615.12.3e-8966.79protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima][more]
BLAST of CsaV3_7G006060.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G19790.14.3e-4539.10SHI-related sequence 7[more]
AT3G51060.12.4e-4053.95Lateral root primordium (LRP) protein-related[more]
AT5G66350.15.4e-4040.37Lateral root primordium (LRP) protein-related[more]
AT1G75520.11.7e-3855.15SHI-related sequence 5[more]
AT2G21400.11.7e-3348.28SHI-related sequence3[more]
BLAST of CsaV3_7G006060.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FXH7|SRS7_ARATH7.7e-4439.10Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1[more]
sp|Q9SD40|SRS1_ARATH4.4e-3953.95Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2[more]
sp|Q9XGX0|SHI_ARATH9.8e-3940.37Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1[more]
sp|Q9LQZ5|SRS5_ARATH3.1e-3755.15Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1[more]
sp|Q9SJT8|SRS3_ARATH3.0e-3248.28Protein SHI RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=SRS3 PE=2 SV=1[more]
BLAST of CsaV3_7G006060.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K1X2|A0A0A0K1X2_CUCSA1.3e-141100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G051450 PE=4 SV=1[more]
tr|A0A1S3C0M5|A0A1S3C0M5_CUCME2.9e-12893.73protein SHI RELATED SEQUENCE 1 OS=Cucumis melo OX=3656 GN=LOC103495466 PE=4 SV=1[more]
tr|A0A1S3CRF2|A0A1S3CRF2_CUCME4.3e-8466.67protein SHI RELATED SEQUENCE 3 OS=Cucumis melo OX=3656 GN=LOC103503903 PE=4 SV=1[more]
tr|A0A0A0LDI9|A0A0A0LDI9_CUCSA1.4e-7965.40Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G865400 PE=4 SV=1[more]
tr|E6NU70|E6NU70_JATCU1.4e-5858.45JHL18I08.14 protein OS=Jatropha curcas OX=180498 GN=JHL18I08.14 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR007818SHI
IPR006510Znf_LRP1
IPR006511SHI_C
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsaV3_7G006060CsaV3_7G006060gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_7G006060.1.exon1CsaV3_7G006060.1.exon1exon
CsaV3_7G006060.1.exon2CsaV3_7G006060.1.exon2exon
CsaV3_7G006060.1.exon3CsaV3_7G006060.1.exon3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_7G006060.1.cds2CsaV3_7G006060.1.cds2CDS
CsaV3_7G006060.1.cds3CsaV3_7G006060.1.cds3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsaV3_7G006060.1CsaV3_7G006060.1-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006511SHORT INTERNODES, C-terminalTIGRFAMTIGR01624TIGR01624coord: 193..241
e-value: 1.5E-23
score: 80.4
IPR006510Zinc finger, lateral root primordium type 1TIGRFAMTIGR01623TIGR01623coord: 99..141
e-value: 1.1E-26
score: 90.4
NoneNo IPR availablePFAMPF05142DUF702coord: 97..242
e-value: 4.3E-62
score: 208.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..168
NoneNo IPR availablePANTHERPTHR31604:SF3PROTEIN SHI RELATED SEQUENCE 5-RELATEDcoord: 1..316
IPR007818SHI protein familyPANTHERPTHR31604FAMILY NOT NAMEDcoord: 1..316