CsaV3_6G038570.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G038570.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	RING-type E3 ubiquitin transferase
Location	chr6 : 21988228 .. 21989880 (-)
Sequence length	1245

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTTTCCGTGTTTTGACTTTTTTTTTTAAATCTCGAATTTCCGTGTGTTGACCTTTTTTCTTTATTGTCATCATCGATATCATCAACTTGTCTTTACACCTTCTCTTCCCTCATTTATATTCTTCTAAACTCCCCATTCCCATCTTCAAGAATTCCACACACAGTTCCTCCATTTTAATTCAGTTCAGTTCCAGAAAAACAAAGAGATCAGATGAAAATGGAAGATCATTTAGAAGAAAATGGTGAAATTGAAGTCCCTTCCTATTTCCTTTGTCCAATTTCCCTTCAACTCATGAGAGATCCAGTCACTATCTCCACCGGTATCACTTACGATCGTTCCAGCATTGAAATGTGGCTTTTTTCATTCAACAAAACTGTTTGTCCCATTACTAAGCAACCCTTATCATCCGATCCTGATTTACTTACCCCCAATCATACTCTTCGTCGTTTGATTCAATCTTGGTGTACGCTCAATGCTTCTAATGGAATTGAAAGAATTCCAACTCCAAAGTCTCCTATTGACAAAACCCATATTGCCAAAATCCTTAAACAAGCTCAAAGTTTCCCTGATTCCACCCATAAATGTCTCCTTGCTCTTAAAGCTATTGCCTTGGAGAATGAGAGAAATCGCAATCTTGTGGCTCAATCTGATGGGGCTTTTGATTTTCTAGCTATGGTTATCAAGAGTGGTGGTAGTAATAATATTGCTTCTATTGAGTTAGCTGTGGAAATTCTCTTTCATATCAAATCCTCTCAAACCCATCTCAAGAATCTCGTAAATGGTGATGTTGATTTTATTAACTCTCTTACTTTTGTTCTGCAAAATGGGAATTGTCAATCTAGAGCTTACGCGGTAATGTTGCTTAAATCAAGCTTGGAACTTGCTGATCCAATTCGTTTGATGAGTATTGAGAGGGAACTTCTTAGAGAAATTGTTCGTGTGATCCATGATCATATTTCTCATCAAGCATCGAAATCGGCGTTGAAGGTTCTCGCTGAGGTTTGTCCGTGGGGGAGGAATCGTGTGAAGGCAGTCGAGGGTGGTGCAGTTGGGGTGTTAGTGGAGTTGCTTCTGAATTCGACCGAGAGGCGGTGGTCGGAGTTAGGATTGGTGATTCTGGATCAGCTTTGCGGGTGTGCGGAGGGGCGGGAGAAGCTCGTGGCACATGCGGCTGGGCTTGCGGTTGTGTCTAAGAAAATACTTAGGGTTTCGGCCATGGCGAGTGATCGTGCAGTGAGGATATTGTCATCGATTTGTCGGTTTTCGGCATCGGCGAAAGTGATGCAAGAAATGTTGGAGGTTGGGGTGGTGGCAAAGCTGTGTTTAGTATTGCAAATGGATTGTAGTATGAAGACAAGGGAGAAGGCAAGAGATACACTAAAGTTGCATTCTAGGGTTTGGAGTAATTCTTCTTGTATTCCTCCACATTTGTTGTCTGCTTATCCATCCACTTGATCCCTTCTTTGTTCTTCTTTCTTCATTTTTCTTTTCTTTACATGTAGAAACATTGAACACATAGATTATTGATATGAGCAAAAATTGCTTACAAATTAGGGATTTTAAAAATATTTGACAATTGAAAAGAATTCATATACCATTTAATTTTCCGTTTTCTATTCTAAGTATTTTGAATCATGTTATGAGTGAGTA

mRNA sequence

ATGAAAATGGAAGATCATTTAGAAGAAAATGGTGAAATTGAAGTCCCTTCCTATTTCCTTTGTCCAATTTCCCTTCAACTCATGAGAGATCCAGTCACTATCTCCACCGGTATCACTTACGATCGTTCCAGCATTGAAATGTGGCTTTTTTCATTCAACAAAACTGTTTGTCCCATTACTAAGCAACCCTTATCATCCGATCCTGATTTACTTACCCCCAATCATACTCTTCGTCGTTTGATTCAATCTTGGTGTACGCTCAATGCTTCTAATGGAATTGAAAGAATTCCAACTCCAAAGTCTCCTATTGACAAAACCCATATTGCCAAAATCCTTAAACAAGCTCAAAGTTTCCCTGATTCCACCCATAAATGTCTCCTTGCTCTTAAAGCTATTGCCTTGGAGAATGAGAGAAATCGCAATCTTGTGGCTCAATCTGATGGGGCTTTTGATTTTCTAGCTATGGTTATCAAGAGTGGTGGTAGTAATAATATTGCTTCTATTGAGTTAGCTGTGGAAATTCTCTTTCATATCAAATCCTCTCAAACCCATCTCAAGAATCTCGTAAATGGTGATGTTGATTTTATTAACTCTCTTACTTTTGTTCTGCAAAATGGGAATTGTCAATCTAGAGCTTACGCGGTAATGTTGCTTAAATCAAGCTTGGAACTTGCTGATCCAATTCGTTTGATGAGTATTGAGAGGGAACTTCTTAGAGAAATTGTTCGTGTGATCCATGATCATATTTCTCATCAAGCATCGAAATCGGCGTTGAAGGTTCTCGCTGAGGTTTGTCCGTGGGGGAGGAATCGTGTGAAGGCAGTCGAGGGTGGTGCAGTTGGGGTGTTAGTGGAGTTGCTTCTGAATTCGACCGAGAGGCGGTGGTCGGAGTTAGGATTGGTGATTCTGGATCAGCTTTGCGGGTGTGCGGAGGGGCGGGAGAAGCTCGTGGCACATGCGGCTGGGCTTGCGGTTGTGTCTAAGAAAATACTTAGGGTTTCGGCCATGGCGAGTGATCGTGCAGTGAGGATATTGTCATCGATTTGTCGGTTTTCGGCATCGGCGAAAGTGATGCAAGAAATGTTGGAGGTTGGGGTGGTGGCAAAGCTGTGTTTAGTATTGCAAATGGATTGTAGTATGAAGACAAGGGAGAAGGCAAGAGATACACTAAAGTTGCATTCTAGGGTTTGGAGTAATTCTTCTTGTATTCCTCCACATTTGTTGTCTGCTTATCCATCCACTTGA

Coding sequence (CDS)

ATGAAAATGGAAGATCATTTAGAAGAAAATGGTGAAATTGAAGTCCCTTCCTATTTCCTTTGTCCAATTTCCCTTCAACTCATGAGAGATCCAGTCACTATCTCCACCGGTATCACTTACGATCGTTCCAGCATTGAAATGTGGCTTTTTTCATTCAACAAAACTGTTTGTCCCATTACTAAGCAACCCTTATCATCCGATCCTGATTTACTTACCCCCAATCATACTCTTCGTCGTTTGATTCAATCTTGGTGTACGCTCAATGCTTCTAATGGAATTGAAAGAATTCCAACTCCAAAGTCTCCTATTGACAAAACCCATATTGCCAAAATCCTTAAACAAGCTCAAAGTTTCCCTGATTCCACCCATAAATGTCTCCTTGCTCTTAAAGCTATTGCCTTGGAGAATGAGAGAAATCGCAATCTTGTGGCTCAATCTGATGGGGCTTTTGATTTTCTAGCTATGGTTATCAAGAGTGGTGGTAGTAATAATATTGCTTCTATTGAGTTAGCTGTGGAAATTCTCTTTCATATCAAATCCTCTCAAACCCATCTCAAGAATCTCGTAAATGGTGATGTTGATTTTATTAACTCTCTTACTTTTGTTCTGCAAAATGGGAATTGTCAATCTAGAGCTTACGCGGTAATGTTGCTTAAATCAAGCTTGGAACTTGCTGATCCAATTCGTTTGATGAGTATTGAGAGGGAACTTCTTAGAGAAATTGTTCGTGTGATCCATGATCATATTTCTCATCAAGCATCGAAATCGGCGTTGAAGGTTCTCGCTGAGGTTTGTCCGTGGGGGAGGAATCGTGTGAAGGCAGTCGAGGGTGGTGCAGTTGGGGTGTTAGTGGAGTTGCTTCTGAATTCGACCGAGAGGCGGTGGTCGGAGTTAGGATTGGTGATTCTGGATCAGCTTTGCGGGTGTGCGGAGGGGCGGGAGAAGCTCGTGGCACATGCGGCTGGGCTTGCGGTTGTGTCTAAGAAAATACTTAGGGTTTCGGCCATGGCGAGTGATCGTGCAGTGAGGATATTGTCATCGATTTGTCGGTTTTCGGCATCGGCGAAAGTGATGCAAGAAATGTTGGAGGTTGGGGTGGTGGCAAAGCTGTGTTTAGTATTGCAAATGGATTGTAGTATGAAGACAAGGGAGAAGGCAAGAGATACACTAAAGTTGCATTCTAGGGTTTGGAGTAATTCTTCTTGTATTCCTCCACATTTGTTGTCTGCTTATCCATCCACTTGA

Protein sequence

MKMEDHLEENGEIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQPLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPDSTHKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKSSQTHLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLREIVRVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGLVILDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQEMLEVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST

Homology

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BLAST of CsaV3_6G038570.1 vs. NCBI nr
Match: XP_004140266.2 (PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus])

HSP 1 Score: 808.1 bits (2086), Expect = 1.4e-230
Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 0


Query: 1   MKMEDHLEENGEIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPIT 60
           MKMEDHLEENGEIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPIT
Sbjct: 1   MKMEDHLEENGEIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPIT 60

Query: 61  KQPLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPD 120
           KQPLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPD
Sbjct: 61  KQPLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPD 120

Query: 121 STHKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKS 180
           STHKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKS
Sbjct: 121 STHKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKS 180

Query: 181 SQTHLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLRE 240
           SQTHLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLRE
Sbjct: 181 SQTHLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLRE 240

Query: 241 IVRVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGL 300
           IVRVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGL
Sbjct: 241 IVRVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGL 300

Query: 301 VILDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQE 360
           VILDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQE
Sbjct: 301 VILDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQE 360

Query: 361 MLEVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST 415
           MLEVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST
Sbjct: 361 MLEVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST 414

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BLAST of CsaV3_6G038570.1 vs. NCBI nr
Match: KGN48051.1 (hypothetical protein Csa_6G426370 [Cucumis sativus])

HSP 1 Score: 804.3 bits (2076), Expect = 2.0e-229
Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0


Query: 3   MEDHLEENGEIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQ 62
           MEDHLEENGEIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQ
Sbjct: 1   MEDHLEENGEIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQ 60

Query: 63  PLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPDST 122
           PLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPDST
Sbjct: 61  PLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPDST 120

Query: 123 HKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKSSQ 182
           HKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKSSQ
Sbjct: 121 HKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKSSQ 180

Query: 183 THLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLREIV 242
           THLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLREIV
Sbjct: 181 THLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLREIV 240

Query: 243 RVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGLVI 302
           RVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGLVI
Sbjct: 241 RVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGLVI 300

Query: 303 LDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQEML 362
           LDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQEML
Sbjct: 301 LDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQEML 360

Query: 363 EVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST 415
           EVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST
Sbjct: 361 EVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST 412

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BLAST of CsaV3_6G038570.1 vs. NCBI nr
Match: XP_008449598.1 (PREDICTED: E3 ubiquitin-protein ligase PUB22-like [Cucumis melo])

HSP 1 Score: 786.6 bits (2030), Expect = 4.2e-224
Identity = 402/414 (97.10%), Postives = 407/414 (98.31%), Query Frame = 0


Query: 1   MKMEDHLEENGEIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPIT 60
           MKMED LEENG IEVPSYFLCPISLQLMRDPVTISTGITYDRSSIE WLFSFNKTVCPIT
Sbjct: 1   MKMEDQLEENGGIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEKWLFSFNKTVCPIT 60

Query: 61  KQPLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPD 120
           KQPLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQ+FP+
Sbjct: 61  KQPLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQNFPN 120

Query: 121 STHKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKS 180
           S HKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKS
Sbjct: 121 SNHKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKS 180

Query: 181 SQTHLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLRE 240
           SQ HLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLRE
Sbjct: 181 SQAHLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLRE 240

Query: 241 IVRVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGL 300
            VRVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGL
Sbjct: 241 TVRVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGL 300

Query: 301 VILDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQE 360
           V+LDQLCGCAEGREKLV HAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKV+QE
Sbjct: 301 VVLDQLCGCAEGREKLVEHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVLQE 360

Query: 361 MLEVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST 415
           MLEVGVVAKLCLVLQMDCS+KTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST
Sbjct: 361 MLEVGVVAKLCLVLQMDCSLKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST 414

[Close]

BLAST of CsaV3_6G038570.1 vs. NCBI nr
Match: XP_023513225.1 (E3 ubiquitin-protein ligase PUB23-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 711.8 bits (1836), Expect = 1.3e-201
Identity = 362/414 (87.44%), Postives = 389/414 (93.96%), Query Frame = 0


Query: 1   MKMEDHLEENGEIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPIT 60
           M+ME+  +  G++EVPSYFLCPISLQLMRDPVTISTGITYDRS+IE WLFS NK  CPIT
Sbjct: 1   MRMEE--DGGGDLEVPSYFLCPISLQLMRDPVTISTGITYDRSNIEKWLFSCNKRTCPIT 60

Query: 61  KQPLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPD 120
           KQPL SDPDL+TPNHTLRRLIQ+WCTLNAS+G+ERIPTPKSPIDKTH+AKILKQA++FP 
Sbjct: 61  KQPL-SDPDLVTPNHTLRRLIQAWCTLNASHGVERIPTPKSPIDKTHVAKILKQAKNFPS 120

Query: 121 STHKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKS 180
           S HKCLLALKAIALE+ERN  LVAQSDGAF+F+A VIKSGG  NI SIELAVEILFHIKS
Sbjct: 121 SNHKCLLALKAIALESERNCTLVAQSDGAFEFVAAVIKSGGDKNIGSIELAVEILFHIKS 180

Query: 181 SQTHLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLRE 240
           S+ HLKNLVNGD +FINSLTFVL+NGNCQSRAYA+MLLKSSLELADPIRLMSIERELL E
Sbjct: 181 SEAHLKNLVNGDGNFINSLTFVLKNGNCQSRAYAIMLLKSSLELADPIRLMSIERELLSE 240

Query: 241 IVRVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGL 300
           IVRVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSE+GL
Sbjct: 241 IVRVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSEIGL 300

Query: 301 VILDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQE 360
           VILDQLCGCAEGREKL+ H+AG+A+VSKKILRVSAMASDRAVRILSSICRFSAS KV+QE
Sbjct: 301 VILDQLCGCAEGREKLMEHSAGVAIVSKKILRVSAMASDRAVRILSSICRFSASVKVVQE 360

Query: 361 MLEVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST 415
           MLEVGVVAKLCLVLQMDCS KTREKARD LKLHSRVWSNSSCIPPHL SAYPS+
Sbjct: 361 MLEVGVVAKLCLVLQMDCSSKTREKARDILKLHSRVWSNSSCIPPHLASAYPSS 411

[Close]

BLAST of CsaV3_6G038570.1 vs. NCBI nr
Match: XP_022153043.1 (E3 ubiquitin-protein ligase PUB23-like [Momordica charantia])

HSP 1 Score: 639.8 bits (1649), Expect = 6.4e-180
Identity = 328/415 (79.04%), Postives = 369/415 (88.92%), Query Frame = 0


Query: 1   MKMEDHLEENGEIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPIT 60
           M+M+D   E  E+EVPSYFLCPISLQLMRDPVTISTGITYDRS+IE WLFS NK  CPIT
Sbjct: 1   MRMQD---EGFEVEVPSYFLCPISLQLMRDPVTISTGITYDRSAIEKWLFSCNKQTCPIT 60

Query: 61  KQPLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSF-P 120
           KQPLS+    LTPNHTLRRLIQ+WCTL+AS+G+ERIPTPK+PIDKTHIAKILKQAQ+F P
Sbjct: 61  KQPLSTSD--LTPNHTLRRLIQAWCTLHASHGVERIPTPKTPIDKTHIAKILKQAQNFSP 120

Query: 121 DSTHKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIK 180
           DS HKCL+ LKA ALE++RNRNLVA+SDG FDFLA V+  G ++NI S+ELAVEILFH+K
Sbjct: 121 DSLHKCLITLKATALESQRNRNLVAESDGVFDFLAAVVTGGANHNIDSVELAVEILFHLK 180

Query: 181 SSQTHLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLR 240
           SS+THLKNLVNGD  F+NSL  VLQ GN QSRAYAVMLL+S+ +LA PI LMSI+RE+ +
Sbjct: 181 SSETHLKNLVNGDGSFMNSLLHVLQRGNYQSRAYAVMLLQSTSQLAHPIHLMSIDREVFK 240

Query: 241 EIVRVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELG 300
           EIVRVI D IS QA+KSALK+LAEVCPWGRNR+KAV+  AVGVLVELLLNSTERRWSELG
Sbjct: 241 EIVRVIQDQISRQATKSALKLLAEVCPWGRNRIKAVDCDAVGVLVELLLNSTERRWSELG 300

Query: 301 LVILDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQ 360
           LV+LDQLCG AEGREKL+ H AG+AVVSKKILRVS +AS+RAVRILSSICRFS + KV+Q
Sbjct: 301 LVVLDQLCGRAEGREKLLGHGAGVAVVSKKILRVSTLASNRAVRILSSICRFSGTGKVVQ 360

Query: 361 EMLEVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST 415
           EMLEVGVVAKLCLVLQMDCS+KTREKARD LKLH RVWSNSSCIPPHLLSAYPS+
Sbjct: 361 EMLEVGVVAKLCLVLQMDCSLKTREKARDILKLHFRVWSNSSCIPPHLLSAYPSS 410

[Close]

BLAST of CsaV3_6G038570.1 vs. TAIR10
Match: AT3G52450.1 (plant U-box 22)

HSP 1 Score: 417.9 bits (1073), Expect = 7.2e-117
Identity = 215/434 (49.54%), Postives = 304/434 (70.05%), Query Frame = 0


Query: 12  EIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQPLSSDPDLL 71
           EIE+PS+FLCPISL +M+DPV +STGITYDR SIE WLFS  K  CP+TKQ ++     L
Sbjct: 4   EIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETD--L 63

Query: 72  TPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPDSTHKCLLALKA 131
           TPNHTLRRLIQSWCTLNAS GIERIPTPK PI K+ I K++K++ S   +  KCL  L+ 
Sbjct: 64  TPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQ 123

Query: 132 IALENERNR-------------NLVAQSDGAFDFLAMVIKSGGSNNIAS----------- 191
           I  EN  N+             N+V+ S   ++  +  + S   N++             
Sbjct: 124 IVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSS 183

Query: 192 ---IELAVEILFHIKSSQTHLKNLVNG--DVDFINSLTFVLQNGNCQSRAYAVMLLKSSL 251
              ++ A+ +L+H+ +S+T LK+L+N     + + +LT ++Q G  +SRAYA +LLK  L
Sbjct: 184 RSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLKKLL 243

Query: 252 ELADPIRLMSIERELLREIVRVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGV 311
           E+ADP++++ +EREL  E+++++HD ISH+A++SA+++L   CPWGRNR KAVEGG + +
Sbjct: 244 EVADPMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAVEGGTISM 303

Query: 312 LVELLLN---STERRWSELGLVILDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASD 371
           ++ELL++   S+ERR SE+ +V+LD LC CAEGR + + H A +AVVSKKILRVS + S+
Sbjct: 304 IIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQITSE 363

Query: 372 RAVRILSSICRFSASAKVMQEMLEVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSN 414
           RAVR+L S+ RF A+  ++QEML++GVVAKLCLVLQ+ C  KT+EKA++ LKLH+RVW  
Sbjct: 364 RAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHARVWRE 423

[Close]

BLAST of CsaV3_6G038570.1 vs. TAIR10
Match: AT2G35930.1 (plant U-box 23)

HSP 1 Score: 417.5 bits (1072), Expect = 9.4e-117
Identity = 211/406 (51.97%), Postives = 302/406 (74.38%), Query Frame = 0


Query: 12  EIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQPLSSDPDLL 71
           EIE+P +FLCPISL++M+DPV +STGITYDR SIE WLF+  K  CP+TKQ + +D D L
Sbjct: 9   EIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDI-TDAD-L 68

Query: 72  TPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPDSTHKCLLALKA 131
           TPNHTLRRLIQSWCTLNAS G+ERIPTP+ PI K+ I K+++ + S  ++  KCL  L+ 
Sbjct: 69  TPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQ 128

Query: 132 IALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKSSQTHLKNLVNG 191
           I  EN  N+  + ++ G  +FLA ++ S  S N +  + A+ +L+H+++S+T LKNL+N 
Sbjct: 129 IVSENATNKRCL-EAAGVPEFLANIV-SNDSENGSLTDEALNLLYHLETSETVLKNLLNN 188

Query: 192 --DVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLREIVRVIHDHI 251
             D + + SLT ++Q G  +SR YA +LLK+ LE+ADP++ M+++ E+  E+V+++ D I
Sbjct: 189 KKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDRI 248

Query: 252 SHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLN---STERRWSELGLVILDQL 311
           S +A+K+A+ +L  +CPWGRNR KAVE G + V++ELL++   ++ERR  E+ +V+LD L
Sbjct: 249 SQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLL 308

Query: 312 CGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQEMLEVGV 371
           C CAEGR + + H A +AVV KKILRVS  ASDRAVR+L S+ RF A+  ++ EML++GV
Sbjct: 309 CQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLHEMLQLGV 368

Query: 372 VAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYP 413
           VAKLCLVLQ+ C  KT+EKA++ LKLH+RVW +S C+P +++ AYP
Sbjct: 369 VAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLPKNMILAYP 410

[Close]

BLAST of CsaV3_6G038570.1 vs. TAIR10
Match: AT3G11840.1 (plant U-box 24)

HSP 1 Score: 258.1 bits (658), Expect = 9.5e-69
Identity = 162/446 (36.32%), Postives = 242/446 (54.26%), Query Frame = 0


Query: 8   EENGEIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQPLSSD 67
           +E  EIE+P+YF+CPISL++M+DPVT  +GITYDR +I  WL       CP+TKQPL  D
Sbjct: 17  QEEEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKVPS--CPVTKQPLPLD 76

Query: 68  PDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPDST---HK 127
            D LTPNH LRRLIQ WC  N + G+ RI TP+ P  K ++ + +K  + F        +
Sbjct: 77  SD-LTPNHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGREE 136

Query: 128 CLLALKAIALENERNRNLVAQSDGAFDFLAMVIK-----SGGSNNIASIELAVEILFHIK 187
            L  L+ +A++   NR L+ +       +  V+K       G   I  ++ ++ +L  I 
Sbjct: 137 TLQKLEVLAMDG-NNRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLHLIG 196

Query: 188 SSQTHLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLE---------------- 247
                 K ++  +   + SLT+VL   +  S+AY ++LL++  E                
Sbjct: 197 IPSNDAKTILMENDRVMESLTWVLHQEDFLSKAYTIVLLRNLTEYTSSHIVERLNPEIFK 256

Query: 248 -----LADPIRLMSIERELLREIV--------------RVIHDHISHQASKSALKVLAEV 307
                L D +  ++     +RE V              ++ H  +  QA  +AL +L E 
Sbjct: 257 GIIGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQAVTAALMILLET 316

Query: 308 CPWGRNRVKAVEGGAVGVLVELLLNST-ERRWSELGLVILDQLCGCAEGREKLVAHAAGL 367
             W RNR   V+ GAV  L+EL ++ T E+R +EL L +L +LC CA GR +++AH  G+
Sbjct: 317 SSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHRGGI 376

Query: 368 AVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQEMLEVGVVAKLCLVLQMDCSMKTR 410
           AVV+K++LRVS  A DRA+ IL+++ +FS    V++EM+ VG V KLC VL MDC +  +
Sbjct: 377 AVVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVLGMDCGLNLK 436

[Close]

BLAST of CsaV3_6G038570.1 vs. TAIR10
Match: AT3G19380.1 (plant U-box 25)

HSP 1 Score: 204.1 bits (518), Expect = 1.6e-52
Identity = 132/395 (33.42%), Postives = 211/395 (53.42%), Query Frame = 0


Query: 13  IEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQPLSSDPDLLT 72
           I++P +F CPISL+LM+DPVT+ TG TYDR+SIE W+   N T CP+T+ PLS     L 
Sbjct: 12  IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSD--FTLI 71

Query: 73  PNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPD------STHKCL 132
           PNHTLRRLIQ WC  N SNG+ERIPTPK P D T +  +L QA +         S    L
Sbjct: 72  PNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAAL 131

Query: 133 LALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKSSQTHLK 192
             L+  A ++++NR L+A  +     + ++     S+ + S  LA+ ++  I      + 
Sbjct: 132 RRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQFVS 191

Query: 193 NLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLK---SSLELADPIRLMSIERELLREIVR 252
             ++ D   +  LT +L + + ++R  A  L++   +  + AD    +S    +   ++ 
Sbjct: 192 --ISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGVLD 251

Query: 253 VIHDHI-SHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGLVI 312
           ++ + I S +A K  +K L  +C     R  A+  GA  +L++ L    +R  +E  L  
Sbjct: 252 LLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALAT 311

Query: 313 LDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQEML 372
           ++ LC   EG      HA  + ++ K ILRVS  A++ A   L ++C  +A  +  +E  
Sbjct: 312 VELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALC--TAEERWREEAA 371

Query: 373 EVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVW 398
             GVV +L L++Q +C+ + ++KA+  LKL    W
Sbjct: 372 GAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSW 400

[Close]

BLAST of CsaV3_6G038570.1 vs. TAIR10
Match: AT1G49780.1 (plant U-box 26)

HSP 1 Score: 199.1 bits (505), Expect = 5.2e-51
Identity = 136/406 (33.50%), Postives = 215/406 (52.96%), Query Frame = 0


Query: 13  IEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQPLSSDPDLLT 72
           I++P +F CPISL LM DPVTISTG TYDR+SI+ W+ +   T CP+T+  LS     L 
Sbjct: 12  IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWI-AMGNTTCPVTRVALSD--FTLI 71

Query: 73  PNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPD------STHKCL 132
           PNHTLRRLIQ WC  N SNG+ERIPTPK P D   +  +L QA +         S    +
Sbjct: 72  PNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAI 131

Query: 133 LALKAIALENERNRNLVAQSDGAFDFLAMVI-----KSGGSNNIASIELAVEILFHIKSS 192
             L+ +A ++E+NR L+A    A + L  ++      +  S+ + S  LA+ +L H+  +
Sbjct: 132 RRLRGLARDSEKNRVLIA-GHNAREILVRILFADIETTSLSSELVSESLALLVLLHMTET 191

Query: 193 QTHLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRL---MSIERELL 252
           +      V  D   +  +T +L + + + R  A  L++  L  A  + L   +S    + 
Sbjct: 192 EC---EAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIF 251

Query: 253 REIVRVIHDHI-SHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSE 312
             ++ ++ + I S +A K  +K +  +C   + R  A+  GA G+L++ L    +R  +E
Sbjct: 252 EGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTE 311

Query: 313 LGLVILDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKV 372
            GL  ++ LC   EG      HA  + ++ K ILRVS  A++ A   L ++C  +A  + 
Sbjct: 312 RGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALC--TAEERC 371

Query: 373 MQEMLEVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCI 404
             E    G+V +L L++Q DC+ + + KA+  LKL    W + S +
Sbjct: 372 RDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTV 408

[Close]

BLAST of CsaV3_6G038570.1 vs. Swiss-Prot
Match: sp|Q9SVC6|PUB22_ARATH (E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 1.3e-115
Identity = 215/434 (49.54%), Postives = 304/434 (70.05%), Query Frame = 0


Query: 12  EIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQPLSSDPDLL 71
           EIE+PS+FLCPISL +M+DPV +STGITYDR SIE WLFS  K  CP+TKQ ++     L
Sbjct: 4   EIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETD--L 63

Query: 72  TPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPDSTHKCLLALKA 131
           TPNHTLRRLIQSWCTLNAS GIERIPTPK PI K+ I K++K++ S   +  KCL  L+ 
Sbjct: 64  TPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQ 123

Query: 132 IALENERNR-------------NLVAQSDGAFDFLAMVIKSGGSNNIAS----------- 191
           I  EN  N+             N+V+ S   ++  +  + S   N++             
Sbjct: 124 IVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSS 183

Query: 192 ---IELAVEILFHIKSSQTHLKNLVNG--DVDFINSLTFVLQNGNCQSRAYAVMLLKSSL 251
              ++ A+ +L+H+ +S+T LK+L+N     + + +LT ++Q G  +SRAYA +LLK  L
Sbjct: 184 RSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLKKLL 243

Query: 252 ELADPIRLMSIERELLREIVRVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGV 311
           E+ADP++++ +EREL  E+++++HD ISH+A++SA+++L   CPWGRNR KAVEGG + +
Sbjct: 244 EVADPMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAVEGGTISM 303

Query: 312 LVELLLN---STERRWSELGLVILDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASD 371
           ++ELL++   S+ERR SE+ +V+LD LC CAEGR + + H A +AVVSKKILRVS + S+
Sbjct: 304 IIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQITSE 363

Query: 372 RAVRILSSICRFSASAKVMQEMLEVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSN 414
           RAVR+L S+ RF A+  ++QEML++GVVAKLCLVLQ+ C  KT+EKA++ LKLH+RVW  
Sbjct: 364 RAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHARVWRE 423

[Close]

BLAST of CsaV3_6G038570.1 vs. Swiss-Prot
Match: sp|Q84TG3|PUB23_ARATH (E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana OX=3702 GN=PUB23 PE=1 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.7e-115
Identity = 211/406 (51.97%), Postives = 302/406 (74.38%), Query Frame = 0


Query: 12  EIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQPLSSDPDLL 71
           EIE+P +FLCPISL++M+DPV +STGITYDR SIE WLF+  K  CP+TKQ + +D D L
Sbjct: 9   EIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDI-TDAD-L 68

Query: 72  TPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPDSTHKCLLALKA 131
           TPNHTLRRLIQSWCTLNAS G+ERIPTP+ PI K+ I K+++ + S  ++  KCL  L+ 
Sbjct: 69  TPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQ 128

Query: 132 IALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKSSQTHLKNLVNG 191
           I  EN  N+  + ++ G  +FLA ++ S  S N +  + A+ +L+H+++S+T LKNL+N 
Sbjct: 129 IVSENATNKRCL-EAAGVPEFLANIV-SNDSENGSLTDEALNLLYHLETSETVLKNLLNN 188

Query: 192 --DVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLREIVRVIHDHI 251
             D + + SLT ++Q G  +SR YA +LLK+ LE+ADP++ M+++ E+  E+V+++ D I
Sbjct: 189 KKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDRI 248

Query: 252 SHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLN---STERRWSELGLVILDQL 311
           S +A+K+A+ +L  +CPWGRNR KAVE G + V++ELL++   ++ERR  E+ +V+LD L
Sbjct: 249 SQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLL 308

Query: 312 CGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQEMLEVGV 371
           C CAEGR + + H A +AVV KKILRVS  ASDRAVR+L S+ RF A+  ++ EML++GV
Sbjct: 309 CQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLHEMLQLGV 368

Query: 372 VAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYP 413
           VAKLCLVLQ+ C  KT+EKA++ LKLH+RVW +S C+P +++ AYP
Sbjct: 369 VAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLPKNMILAYP 410

[Close]

BLAST of CsaV3_6G038570.1 vs. Swiss-Prot
Match: sp|Q9SF15|PUB24_ARATH (E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana OX=3702 GN=PUB24 PE=1 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.7e-67
Identity = 162/446 (36.32%), Postives = 242/446 (54.26%), Query Frame = 0


Query: 8   EENGEIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQPLSSD 67
           +E  EIE+P+YF+CPISL++M+DPVT  +GITYDR +I  WL       CP+TKQPL  D
Sbjct: 3   QEEEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKVPS--CPVTKQPLPLD 62

Query: 68  PDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPDST---HK 127
            D LTPNH LRRLIQ WC  N + G+ RI TP+ P  K ++ + +K  + F        +
Sbjct: 63  SD-LTPNHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGREE 122

Query: 128 CLLALKAIALENERNRNLVAQSDGAFDFLAMVIK-----SGGSNNIASIELAVEILFHIK 187
            L  L+ +A++   NR L+ +       +  V+K       G   I  ++ ++ +L  I 
Sbjct: 123 TLQKLEVLAMDG-NNRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLHLIG 182

Query: 188 SSQTHLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLE---------------- 247
                 K ++  +   + SLT+VL   +  S+AY ++LL++  E                
Sbjct: 183 IPSNDAKTILMENDRVMESLTWVLHQEDFLSKAYTIVLLRNLTEYTSSHIVERLNPEIFK 242

Query: 248 -----LADPIRLMSIERELLREIV--------------RVIHDHISHQASKSALKVLAEV 307
                L D +  ++     +RE V              ++ H  +  QA  +AL +L E 
Sbjct: 243 GIIGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQAVTAALMILLET 302

Query: 308 CPWGRNRVKAVEGGAVGVLVELLLNST-ERRWSELGLVILDQLCGCAEGREKLVAHAAGL 367
             W RNR   V+ GAV  L+EL ++ T E+R +EL L +L +LC CA GR +++AH  G+
Sbjct: 303 SSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHRGGI 362

Query: 368 AVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQEMLEVGVVAKLCLVLQMDCSMKTR 410
           AVV+K++LRVS  A DRA+ IL+++ +FS    V++EM+ VG V KLC VL MDC +  +
Sbjct: 363 AVVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVLGMDCGLNLK 422

[Close]

BLAST of CsaV3_6G038570.1 vs. Swiss-Prot
Match: sp|Q9LT79|PUB25_ARATH (U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.9e-51
Identity = 132/395 (33.42%), Postives = 211/395 (53.42%), Query Frame = 0


Query: 13  IEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQPLSSDPDLLT 72
           I++P +F CPISL+LM+DPVT+ TG TYDR+SIE W+   N T CP+T+ PLS     L 
Sbjct: 12  IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSD--FTLI 71

Query: 73  PNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPD------STHKCL 132
           PNHTLRRLIQ WC  N SNG+ERIPTPK P D T +  +L QA +         S    L
Sbjct: 72  PNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAAL 131

Query: 133 LALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKSSQTHLK 192
             L+  A ++++NR L+A  +     + ++     S+ + S  LA+ ++  I      + 
Sbjct: 132 RRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQFVS 191

Query: 193 NLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLK---SSLELADPIRLMSIERELLREIVR 252
             ++ D   +  LT +L + + ++R  A  L++   +  + AD    +S    +   ++ 
Sbjct: 192 --ISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGVLD 251

Query: 253 VIHDHI-SHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGLVI 312
           ++ + I S +A K  +K L  +C     R  A+  GA  +L++ L    +R  +E  L  
Sbjct: 252 LLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALAT 311

Query: 313 LDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQEML 372
           ++ LC   EG      HA  + ++ K ILRVS  A++ A   L ++C  +A  +  +E  
Sbjct: 312 VELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALC--TAEERWREEAA 371

Query: 373 EVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVW 398
             GVV +L L++Q +C+ + ++KA+  LKL    W
Sbjct: 372 GAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSW 400

[Close]

BLAST of CsaV3_6G038570.1 vs. Swiss-Prot
Match: sp|Q9FXA4|PUB26_ARATH (U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 9.4e-50
Identity = 136/406 (33.50%), Postives = 215/406 (52.96%), Query Frame = 0


Query: 13  IEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQPLSSDPDLLT 72
           I++P +F CPISL LM DPVTISTG TYDR+SI+ W+ +   T CP+T+  LS     L 
Sbjct: 12  IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWI-AMGNTTCPVTRVALSD--FTLI 71

Query: 73  PNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPD------STHKCL 132
           PNHTLRRLIQ WC  N SNG+ERIPTPK P D   +  +L QA +         S    +
Sbjct: 72  PNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAI 131

Query: 133 LALKAIALENERNRNLVAQSDGAFDFLAMVI-----KSGGSNNIASIELAVEILFHIKSS 192
             L+ +A ++E+NR L+A    A + L  ++      +  S+ + S  LA+ +L H+  +
Sbjct: 132 RRLRGLARDSEKNRVLIA-GHNAREILVRILFADIETTSLSSELVSESLALLVLLHMTET 191

Query: 193 QTHLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRL---MSIERELL 252
           +      V  D   +  +T +L + + + R  A  L++  L  A  + L   +S    + 
Sbjct: 192 EC---EAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIF 251

Query: 253 REIVRVIHDHI-SHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSE 312
             ++ ++ + I S +A K  +K +  +C   + R  A+  GA G+L++ L    +R  +E
Sbjct: 252 EGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTE 311

Query: 313 LGLVILDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKV 372
            GL  ++ LC   EG      HA  + ++ K ILRVS  A++ A   L ++C  +A  + 
Sbjct: 312 RGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALC--TAEERC 371

Query: 373 MQEMLEVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCI 404
             E    G+V +L L++Q DC+ + + KA+  LKL    W + S +
Sbjct: 372 RDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTV 408

[Close]

BLAST of CsaV3_6G038570.1 vs. TrEMBL
Match: tr|A0A0A0KJY2|A0A0A0KJY2_CUCSA (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G426370 PE=4 SV=1)

HSP 1 Score: 804.3 bits (2076), Expect = 1.3e-229
Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0


Query: 3   MEDHLEENGEIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQ 62
           MEDHLEENGEIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQ
Sbjct: 1   MEDHLEENGEIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQ 60

Query: 63  PLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPDST 122
           PLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPDST
Sbjct: 61  PLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPDST 120

Query: 123 HKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKSSQ 182
           HKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKSSQ
Sbjct: 121 HKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKSSQ 180

Query: 183 THLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLREIV 242
           THLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLREIV
Sbjct: 181 THLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLREIV 240

Query: 243 RVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGLVI 302
           RVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGLVI
Sbjct: 241 RVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGLVI 300

Query: 303 LDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQEML 362
           LDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQEML
Sbjct: 301 LDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQEML 360

Query: 363 EVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST 415
           EVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST
Sbjct: 361 EVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST 412

[Close]

BLAST of CsaV3_6G038570.1 vs. TrEMBL
Match: tr|A0A1S3BME5|A0A1S3BME5_CUCME (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103491434 PE=4 SV=1)

HSP 1 Score: 786.6 bits (2030), Expect = 2.8e-224
Identity = 402/414 (97.10%), Postives = 407/414 (98.31%), Query Frame = 0


Query: 1   MKMEDHLEENGEIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPIT 60
           MKMED LEENG IEVPSYFLCPISLQLMRDPVTISTGITYDRSSIE WLFSFNKTVCPIT
Sbjct: 1   MKMEDQLEENGGIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEKWLFSFNKTVCPIT 60

Query: 61  KQPLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPD 120
           KQPLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQ+FP+
Sbjct: 61  KQPLSSDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQNFPN 120

Query: 121 STHKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKS 180
           S HKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKS
Sbjct: 121 SNHKCLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKS 180

Query: 181 SQTHLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLRE 240
           SQ HLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLRE
Sbjct: 181 SQAHLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLRE 240

Query: 241 IVRVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGL 300
            VRVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGL
Sbjct: 241 TVRVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGL 300

Query: 301 VILDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQE 360
           V+LDQLCGCAEGREKLV HAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKV+QE
Sbjct: 301 VVLDQLCGCAEGREKLVEHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVLQE 360

Query: 361 MLEVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST 415
           MLEVGVVAKLCLVLQMDCS+KTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST
Sbjct: 361 MLEVGVVAKLCLVLQMDCSLKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST 414

[Close]

BLAST of CsaV3_6G038570.1 vs. TrEMBL
Match: tr|A0A2P5BQ49|A0A2P5BQ49_PARAD (RING-type E3 ubiquitin transferase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_220350 PE=4 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 4.6e-142
Identity = 266/411 (64.72%), Postives = 335/411 (81.51%), Query Frame = 0


Query: 13  IEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQPL-------S 72
           IEVPS+FLCPISLQLMRDPVT+STGITYDR +IE WLFS NK+ CP+TKQPL        
Sbjct: 4   IEVPSHFLCPISLQLMRDPVTVSTGITYDRENIEHWLFSCNKSTCPVTKQPLLQLIHAAE 63

Query: 73  SDPDLLTPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQA-QSFPDSTHK 132
            D   LTPNHTLRRLIQ+WCTLNAS GIERIPTPK P+DK+HI K+L +A    P+S  +
Sbjct: 64  IDHHHLTPNHTLRRLIQAWCTLNASYGIERIPTPKPPVDKSHILKLLDEANDDHPNSQLR 123

Query: 133 CLLALKAIALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFH-IKSSQT 192
           CL +LK+IA ++ERN+  + ++ G  +FLA+++K+GG +++A+ E AVE+LFH IKSS+ 
Sbjct: 124 CLQSLKSIASQSERNKKCL-EAAGTIEFLALIVKNGG-DSMATTEAAVELLFHLIKSSEK 183

Query: 193 HLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLREIVR 252
            LK+LV  D   ++SL  VL+ GN QSRAYA++LLK  LELADPIR+MS+  EL  E+V 
Sbjct: 184 RLKSLVTNDGGILDSLVRVLRCGNYQSRAYAIVLLKPILELADPIRVMSVGSELFNEVVL 243

Query: 253 VIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGLVIL 312
           V+ D ISHQASK+AL +L E+CPWGRNR+KAVEGGAV VL+ELLL++ E+R  EL LV+L
Sbjct: 244 VLRDRISHQASKAALNLLMEICPWGRNRIKAVEGGAVPVLIELLLDAPEKRACELTLVVL 303

Query: 313 DQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQEMLE 372
           DQLC CAEGR +L+ H AGLAVVSKKILRVS + S RAVRILSS+CRFSA+++V+QEML+
Sbjct: 304 DQLCCCAEGRAELLRHGAGLAVVSKKILRVSHVVSYRAVRILSSVCRFSATSRVLQEMLQ 363

Query: 373 VGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST 415
           VGVVAKLCLVLQ+D S+KT+E+A++ LKLHSRVW NS+C+P HLLS+YPS+
Sbjct: 364 VGVVAKLCLVLQVDSSLKTKERAKEILKLHSRVWKNSTCMPAHLLSSYPSS 412

[Close]

BLAST of CsaV3_6G038570.1 vs. TrEMBL
Match: tr|A0A1R3KVL2|A0A1R3KVL2_COCAP (RING-type E3 ubiquitin transferase OS=Corchorus capsularis OX=210143 GN=CCACVL1_00664 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 3.0e-141
Identity = 267/414 (64.49%), Postives = 325/414 (78.50%), Query Frame = 0


Query: 12  EIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQPLSSDPDLL 71
           EIE+P +FLCPISLQLMRDPVTISTGITYDR SIE WLFS     CP++KQ L  D D L
Sbjct: 3   EIEIPQHFLCPISLQLMRDPVTISTGITYDRDSIEKWLFSCKNKTCPVSKQVL-LDSD-L 62

Query: 72  TPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPDSTHKCLLALKA 131
           TPNHTLRRLIQ+WCTLNAS+GIERIPTPK PIDKT IAK++K A+ FP+   KCL  L++
Sbjct: 63  TPNHTLRRLIQAWCTLNASHGIERIPTPKPPIDKTQIAKLVKDAKKFPEMKLKCLKRLRS 122

Query: 132 IALENERNRNLVAQSDGAFDFLAMVIKS-----------GGSNNIASIELAVEILFHIKS 191
           I LE ERNR+ + +S GA +FL  +IKS            GS  I + + A+ IL+HIK 
Sbjct: 123 ITLEGERNRSCL-ESSGAVEFLVSIIKSCDSTLLEVVSNEGSEFIKASDEALSILYHIKV 182

Query: 192 SQTHLKNLVNGDVDFINSLTFVLQNGNCQSRAYAVMLLKSSLELADPIRLMSIERELLRE 251
           S+T LK++++ D +F+ SL  V++NGN QSRAYA MLLK   E+ADPI+LMS+  E   E
Sbjct: 183 SETCLKSIISNDQEFVESLVKVMKNGNYQSRAYATMLLKDVFEVADPIQLMSVTPEFFAE 242

Query: 252 IVRVIHDHISHQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNS-TERRWSELG 311
           +VR + D IS QASK+ALK+L E+CPWGRNR+KAVEGGAV VLVELLL S  E+R  EL 
Sbjct: 243 VVRTLRDQISQQASKAALKLLVELCPWGRNRIKAVEGGAVFVLVELLLESAAEKRGCELA 302

Query: 312 LVILDQLCGCAEGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQ 371
           +++LDQLCGCAEGR + + H AG+A+VSKKI RVS +ASDRAVRILSSICRFSA+++V+Q
Sbjct: 303 MIVLDQLCGCAEGRAEFLKHGAGMAIVSKKIFRVSHVASDRAVRILSSICRFSATSRVLQ 362

Query: 372 EMLEVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPS 414
           EML+VGVV+KLCLVLQ+D S KT+EKAR+ LKLHSRVW N SCIP HLLS+YPS
Sbjct: 363 EMLQVGVVSKLCLVLQLDTSHKTKEKAREILKLHSRVWKNPSCIPFHLLSSYPS 413

[Close]

BLAST of CsaV3_6G038570.1 vs. TrEMBL
Match: tr|W9QTE7|W9QTE7_9ROSA (RING-type E3 ubiquitin transferase OS=Morus notabilis OX=981085 GN=L484_017126 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 3.9e-141
Identity = 254/404 (62.87%), Postives = 329/404 (81.44%), Query Frame = 0


Query: 12  EIEVPSYFLCPISLQLMRDPVTISTGITYDRSSIEMWLFSFNKTVCPITKQPLSSDPDLL 71
           EI+VP  FLCPISLQLMRDPVT+STGITYDR +IE WLFS     CP+TKQPL+    +L
Sbjct: 3   EIDVPYLFLCPISLQLMRDPVTVSTGITYDRENIENWLFSCKNDTCPVTKQPLNDTDLML 62

Query: 72  TPNHTLRRLIQSWCTLNASNGIERIPTPKSPIDKTHIAKILKQAQSFPDSTHKCLLALKA 131
           TPNHTLRRLIQ WCTL+AS+GIERIPTPK P+D++ I K+L +A++ P S  KCL  LK+
Sbjct: 63  TPNHTLRRLIQVWCTLHASSGIERIPTPKPPVDESQIVKLLNEAKNVPGSQIKCLQRLKS 122

Query: 132 IALENERNRNLVAQSDGAFDFLAMVIKSGGSNNIASIELAVEILFHIKSSQTHLKNLVNG 191
           IA + ERN+  + +S GA ++LA ++K  GS  +  ++ AVEILFH+KSS+THLKNLV  
Sbjct: 123 IASKGERNKKYL-ESAGAIEYLASIVKKNGSTTVI-LDTAVEILFHLKSSETHLKNLVTN 182

Query: 192 DVDFINSLTFVLQN-GNCQSRAYAVMLLKSSLELADPIRLMSIERELLREIVRVIHDHIS 251
           + + I+SL  VL+  GN QSRAYA +++KS L+LADP++L++++ EL  E+V V+ D IS
Sbjct: 183 ESEIIDSLVMVLRTCGNYQSRAYATVVMKSILDLADPVQLITVKTELFVEVVNVLRDQIS 242

Query: 252 HQASKSALKVLAEVCPWGRNRVKAVEGGAVGVLVELLLNSTERRWSELGLVILDQLCGCA 311
            QASK+ALK+L EVCPWGRNR+KAV+GGAV VL+ELLL ++E+R+ EL LV+LDQLCGCA
Sbjct: 243 QQASKAALKLLLEVCPWGRNRIKAVQGGAVSVLIELLLGTSEKRFCELALVVLDQLCGCA 302

Query: 312 EGREKLVAHAAGLAVVSKKILRVSAMASDRAVRILSSICRFSASAKVMQEMLEVGVVAKL 371
           EGR +L+ H AG+AVVSKKILRVS +AS+RAVRILSS+CRFSA+ +V+ EML VGVVAKL
Sbjct: 303 EGRAELLKHGAGIAVVSKKILRVSHVASERAVRILSSVCRFSATPRVVHEMLSVGVVAKL 362

Query: 372 CLVLQMDCSMKTREKARDTLKLHSRVWSNSSCIPPHLLSAYPST 415
           CLVLQ++  +K +E+A++ LKLHSRVW +S+CIP HLLS+YPS+
Sbjct: 363 CLVLQVNSGLKAKERAKEILKLHSRVWKSSNCIPVHLLSSYPSS 404

The following BLAST results are available for this feature:

BLAST of CsaV3_6G038570.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140266.2	1.4e-230	100.00	PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus]	[more]
KGN48051.1	2.0e-229	100.00	hypothetical protein Csa_6G426370 [Cucumis sativus]	[more]
XP_008449598.1	4.2e-224	97.10	PREDICTED: E3 ubiquitin-protein ligase PUB22-like [Cucumis melo]	[more]
XP_023513225.1	1.3e-201	87.44	E3 ubiquitin-protein ligase PUB23-like [Cucurbita pepo subsp. pepo]	[more]
XP_022153043.1	6.4e-180	79.04	E3 ubiquitin-protein ligase PUB23-like [Momordica charantia]	[more]

BLAST of CsaV3_6G038570.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G52450.1	7.2e-117	49.54	plant U-box 22	[more]
AT2G35930.1	9.4e-117	51.97	plant U-box 23	[more]
AT3G11840.1	9.5e-69	36.32	plant U-box 24	[more]
AT3G19380.1	1.6e-52	33.42	plant U-box 25	[more]
AT1G49780.1	5.2e-51	33.50	plant U-box 26	[more]

BLAST of CsaV3_6G038570.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SVC6\|PUB22_ARATH	1.3e-115	49.54	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 ...	[more]
sp\|Q84TG3\|PUB23_ARATH	1.7e-115	51.97	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana OX=3702 GN=PUB23 PE=1 ...	[more]
sp\|Q9SF15\|PUB24_ARATH	1.7e-67	36.32	E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana OX=3702 GN=PUB24 PE=1 ...	[more]
sp\|Q9LT79\|PUB25_ARATH	2.9e-51	33.42	U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2...	[more]
sp\|Q9FXA4\|PUB26_ARATH	9.4e-50	33.50	U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2...	[more]

BLAST of CsaV3_6G038570.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KJY2\|A0A0A0KJY2_CUCSA	1.3e-229	100.00	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G426370 PE...	[more]
tr\|A0A1S3BME5\|A0A1S3BME5_CUCME	2.8e-224	97.10	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103491434 PE=4 ...	[more]
tr\|A0A2P5BQ49\|A0A2P5BQ49_PARAD	4.6e-142	64.72	RING-type E3 ubiquitin transferase OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
tr\|A0A1R3KVL2\|A0A1R3KVL2_COCAP	3.0e-141	64.49	RING-type E3 ubiquitin transferase OS=Corchorus capsularis OX=210143 GN=CCACVL1_...	[more]
tr\|W9QTE7\|W9QTE7_9ROSA	3.9e-141	62.87	RING-type E3 ubiquitin transferase OS=Morus notabilis OX=981085 GN=L484_017126 P...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0004842	ubiquitin-protein transferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0016567	protein ubiquitination

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR013083	Znf_RING/FYVE/PHD
IPR011989	ARM-like
IPR003613	Ubox_domain

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_6G038570	CsaV3_6G038570	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G038570.1.cds1	CsaV3_6G038570.1.cds1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G038570.1.exon1	CsaV3_6G038570.1.exon1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G038570.1	CsaV3_6G038570.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 18..84 e-value: 3.3E-28 score: 109.7
IPR003613	U box domain	PFAM	PF04564	U-box	coord: 15..86 e-value: 1.8E-18 score: 66.4
IPR003613	U box domain	PROSITE	PS51698	U_BOX	coord: 14..91 score: 32.616
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 171..395 e-value: 5.6E-9 score: 37.6
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 2..95 e-value: 4.7E-28 score: 99.1
None	No IPR available	PANTHER	PTHR22849	WDSAM1 PROTEIN	coord: 12..412
None	No IPR available	PANTHER	PTHR22849:SF11	SUBFAMILY NOT NAMED	coord: 12..412
None	No IPR available	CDD	cd16664	RING-Ubox_PUB	coord: 19..62 e-value: 2.03238E-21 score: 85.7482
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 10..88
IPR016024	Armadillo-type fold	SUPERFAMILY	SSF48371	ARM repeat	coord: 187..391