CsaV3_6G037810.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGCCAATCTCGCAGAGCAGAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGGAGGAGGAAAGCCGTTAGAGCAAAGAAAGAAATGGAGCTCCGGCACAGGCACCGGCGGTAACGTTCTTCCTTAGGAGGTGGTAGCTTGAACATTCAGGAATCTGCAAAAACTCCCTTGCATTTTGTCTACCATCTCCGAGAACCTCTTGATTTTCATTTCCTTTTTACCTAAACACTCAGTATTCTTCTTATTATTCATCCATGCGGCGAGGTAGAGCCACGGATCCATTGACGGTGCCAGAATCAGTCCAAAAACCTGTTAAAGAAGTCCGATTCAGAGGCGTTCGGAAGCGTCCATGGGGACGATACGCCGCCGAGATTAGAGATCCTTGGAAGAAAACTCGAGTTTGGCTAGGTACCTTCGATACGGCGGAGGATGCTGCCAGAGCTTACGATGAAGCTGCTCTCTCCCTTCGAGGACCGAAGGCGAAAACGAACTTCCCTTTGCATCCATCTACTATCTCTGTTCATCAACAAATTCCATTCTCGCAGCAGTTTCATGATTCCGGTGGATTCTGTGAGATTAGTAACATTATTCCAGTTAATAGACCTACATCGAGTAGTCTGAGCTCCACCGTGGAGTCATTTAGCGGTCCACGGCTTTCGATTCCGGCTCCGTCGGTTCCAAAGCTTCGCCGGAAGTCCCTGCCGCAGGTTGCTCCCGACGATTGCCATAGCGACTGTGATTCGTCGTCTTCGGTTGTTGATGACAGTGAGGAATATGCTCACTCGTCGTCAATTCGTAGAGTGTTGCCGTTCGATCTGAATCTACCTCCTCCACTGCCGCCGCCGCATGACGTCGATTTATCCGGTGATGATCTTCATGCCACTGCTCTGTATTTTTGATATATTATCCTGCTTCTCAATCACTAATACCAAAAGGTTTACTCTCTCCATTATCTATTGAACATTCCTATCGATTGGGTAGAACTTAAACGATAACTTTGTCTCTCAACTGCTGCTTGTTGAATGAGAAAAATTTGCTTCTCCATTCCTTAATTTCTTAGTTCTTGATGTAGATTAGCGTCTGGATTTTACCAACACAAGTTCTCTAAATCTCTTGTCTGTGTCTCTGTGTCTCTAAACAAAAGGAAAGAAATTAATCCATGAATGTTTCTAAGCAGTTCTACATTTTGATCTAATCATCTCGTTAACCCCATCAAATAATTCATCATATTCTGAAATTCATTTCACCTCACCTTGTTCAATCAATTCATAGGAAAATATCATAAGCATCAGGATTCAAACTTCATCTCTATTTGGGAAATTCCACAGAATTAAAGTTCCTCTCAAATCGAACCCCCCCCCCCCCCCCCCCCCCTTGGATTCTCTCATTTCTTCCTCCCCTTTTTCTTCAATGGATTATTATTGCGTCTGGTACACATAATTACTATATTCTTAGTCTACCTTTTTTTCCCCCAATTTGTTGCACATGTTAGAGGCATTTATATTCATCATTTCATATTGAAATCTTTACCATAAATCAAATGTCATATTAAGCATGCTATCATATTGATGGGACGACTGAATTAAAATATGACTCATAAATATAATTTTCAGATTTCTTTAAAAAGTAAATTAGAATTTAGAAGCAAACGGATGTAGTAGATTTTTGAGCCCAAATTCAACCTGTTCTTCAGATGGGGTTTGCTCAAATCCCCACGAAAGTATGAGAGCTAAAGCCGCCCAAAAAGGAGAAGAATATGTTGCTTTAGCTATCATTTTTTTTGGTTCCTTTTGAATTTGGGTTGGAAAATTATTCCATGTTGACTGTTTTTTCCATAAGTACTTAGATTGTTTTTTATTCTCTTAATTGCTTATTAAGTTCGTTAATTTCATCTTAATTTTTTCATTTCATTAAAGATGTTTTGGATGTTAGATGGATTAATAATTAATACACATAAGTTTATTTTGAGTTGGAAGTTGAAACAATATTGGTAAAGTATTTTTAGAATGGTTACTATTGATCCATTGAAATTTTTGTAAAGTATTTATTTTGTGGCCAGTTTTGTTGAAAGGGGTTGGTGAAATCTTAAATATTTCCCTTCTATAATATTATTCTGATTACTTCCTTTTTTAATATTTGAAATTTAAATTCAATAATGTTGCCTTTCTTTATAAAGGAAGTATCCATGGGAAGAGGTCATTGTTTTTGTATTAATATTATTATTCTTTTAGCTCAAGAAAATATGATTTACCCTTTACTCTAATTTGGTAGGTGTTGCTTTGTTTGTGTGCATATTTTGAACGTTTAGAGAGGAAGATTTCATATTTCTTATAACTTACAAATGCTTAGTGACATCATAAATGAGTTCGGTTTGGCAAATTAAGTTTATAAAGATCATATTAGAGGCATTAATACTAAAAAAAGAAAGTAGATTGTAGTCAAAACGGGTGTAATATAGCGATGAACATTGGGTTTTTGTTATTTGTAGAATTCTGAATTTCAAGTCTCACTTCTATTTAAGAAAGATGAAGACATGTTTAAGAAATTGTGAAGGGACAAAGCAAATCATTTTAAGTTAAAGAAAAAGAAAATGAGGAATCATTATTTAATAGGTTGTACTCTTTCCAGGGTATTCAAGGTGATGTTAGAAAATTGATATCTTTTGAACTTCAAGGACCAATACAACATAAAAGGAAAGTTCAAAAACATGTTAGATATCTTTAAATTGATACTATGAATTTCTTTTGACTGGGGAAAAA ATGCGGCGAGGTAGAGCCACGGATCCATTGACGGTGCCAGAATCAGTCCAAAAACCTGTTAAAGAAGTCCGATTCAGAGGCGTTCGGAAGCGTCCATGGGGACGATACGCCGCCGAGATTAGAGATCCTTGGAAGAAAACTCGAGTTTGGCTAGGTACCTTCGATACGGCGGAGGATGCTGCCAGAGCTTACGATGAAGCTGCTCTCTCCCTTCGAGGACCGAAGGCGAAAACGAACTTCCCTTTGCATCCATCTACTATCTCTGTTCATCAACAAATTCCATTCTCGCAGCAGTTTCATGATTCCGGTGGATTCTGTGAGATTAGTAACATTATTCCAGTTAATAGACCTACATCGAGTAGTCTGAGCTCCACCGTGGAGTCATTTAGCGGTCCACGGCTTTCGATTCCGGCTCCGTCGGTTCCAAAGCTTCGCCGGAAGTCCCTGCCGCAGGTTGCTCCCGACGATTGCCATAGCGACTGTGATTCGTCGTCTTCGGTTGTTGATGACAGTGAGGAATATGCTCACTCGTCGTCAATTCGTAGAGTGTTGCCGTTCGATCTGAATCTACCTCCTCCACTGCCGCCGCCGCATGACGTCGATTTATCCGGTGATGATCTTCATGCCACTGCTCTGTATTTTTGA ATGCGGCGAGGTAGAGCCACGGATCCATTGACGGTGCCAGAATCAGTCCAAAAACCTGTTAAAGAAGTCCGATTCAGAGGCGTTCGGAAGCGTCCATGGGGACGATACGCCGCCGAGATTAGAGATCCTTGGAAGAAAACTCGAGTTTGGCTAGGTACCTTCGATACGGCGGAGGATGCTGCCAGAGCTTACGATGAAGCTGCTCTCTCCCTTCGAGGACCGAAGGCGAAAACGAACTTCCCTTTGCATCCATCTACTATCTCTGTTCATCAACAAATTCCATTCTCGCAGCAGTTTCATGATTCCGGTGGATTCTGTGAGATTAGTAACATTATTCCAGTTAATAGACCTACATCGAGTAGTCTGAGCTCCACCGTGGAGTCATTTAGCGGTCCACGGCTTTCGATTCCGGCTCCGTCGGTTCCAAAGCTTCGCCGGAAGTCCCTGCCGCAGGTTGCTCCCGACGATTGCCATAGCGACTGTGATTCGTCGTCTTCGGTTGTTGATGACAGTGAGGAATATGCTCACTCGTCGTCAATTCGTAGAGTGTTGCCGTTCGATCTGAATCTACCTCCTCCACTGCCGCCGCCGCATGACGTCGATTTATCCGGTGATGATCTTCATGCCACTGCTCTGTATTTTTGA MRRGRATDPLTVPESVQKPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAARAYDEAALSLRGPKAKTNFPLHPSTISVHQQIPFSQQFHDSGGFCEISNIIPVNRPTSSSLSSTVESFSGPRLSIPAPSVPKLRRKSLPQVAPDDCHSDCDSSSSVVDDSEEYAHSSSIRRVLPFDLNLPPPLPPPHDVDLSGDDLHATALYF
BLAST of CsaV3_6G037810.1 vs. NCBI nr
Match: XP_004140127.1 (PREDICTED: ethylene-responsive transcription factor 3-like [Cucumis sativus] >KGN47972.1 hypothetical protein Csa_6G421660 [Cucumis sativus]) HSP 1 Score: 437.6 bits (1124), Expect = 2.5e-119 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. NCBI nr
Match: XP_008449487.1 (PREDICTED: ethylene-responsive transcription factor 3-like [Cucumis melo]) HSP 1 Score: 424.1 bits (1089), Expect = 2.9e-115 Identity = 208/214 (97.20%), Postives = 209/214 (97.66%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. NCBI nr
Match: XP_023511720.1 (ethylene-responsive transcription factor 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 384.8 bits (987), Expect = 1.9e-103 Identity = 190/214 (88.79%), Postives = 201/214 (93.93%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. NCBI nr
Match: XP_022953046.1 (ethylene-responsive transcription factor 3-like [Cucurbita moschata]) HSP 1 Score: 382.5 bits (981), Expect = 9.5e-103 Identity = 189/214 (88.32%), Postives = 200/214 (93.46%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. NCBI nr
Match: XP_022969417.1 (ethylene-responsive transcription factor 3-like [Cucurbita maxima]) HSP 1 Score: 377.5 bits (968), Expect = 3.1e-101 Identity = 188/214 (87.85%), Postives = 198/214 (92.52%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. TAIR10
Match: AT1G50640.1 (ethylene responsive element binding factor 3) HSP 1 Score: 180.3 bits (456), Expect = 1.3e-45 Identity = 115/229 (50.22%), Postives = 133/229 (58.08%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. TAIR10
Match: AT3G20310.1 (ethylene response factor 7) HSP 1 Score: 129.4 bits (324), Expect = 2.6e-30 Identity = 97/246 (39.43%), Postives = 114/246 (46.34%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. TAIR10
Match: AT1G28370.1 (ERF domain protein 11) HSP 1 Score: 120.9 bits (302), Expect = 9.4e-28 Identity = 85/177 (48.02%), Postives = 100/177 (56.50%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. TAIR10
Match: AT3G15210.1 (ethylene responsive element binding factor 4) HSP 1 Score: 115.2 bits (287), Expect = 5.1e-26 Identity = 85/222 (38.29%), Postives = 101/222 (45.50%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. TAIR10
Match: AT5G44210.1 (erf domain protein 9) HSP 1 Score: 114.8 bits (286), Expect = 6.7e-26 Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. Swiss-Prot
Match: sp|Q9SXS8|ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 8.9e-52 Identity = 129/232 (55.60%), Postives = 141/232 (60.78%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. Swiss-Prot
Match: sp|O80339|ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ERF3 PE=1 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 2.3e-44 Identity = 115/229 (50.22%), Postives = 133/229 (58.08%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. Swiss-Prot
Match: sp|Q9LDE4|ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana OX=3702 GN=ERF7 PE=1 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 4.8e-29 Identity = 97/246 (39.43%), Postives = 114/246 (46.34%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. Swiss-Prot
Match: sp|Q9C5I3|ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=ERF11 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.7e-26 Identity = 85/177 (48.02%), Postives = 100/177 (56.50%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. Swiss-Prot
Match: sp|Q9LW49|ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 9.3e-25 Identity = 58/85 (68.24%), Postives = 63/85 (74.12%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. TrEMBL
Match: tr|A0A0A0KHW7|A0A0A0KHW7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421660 PE=4 SV=1) HSP 1 Score: 437.6 bits (1124), Expect = 1.7e-119 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. TrEMBL
Match: tr|A0A1S3BLI0|A0A1S3BLI0_CUCME (ethylene-responsive transcription factor 3-like OS=Cucumis melo OX=3656 GN=LOC103491361 PE=4 SV=1) HSP 1 Score: 424.1 bits (1089), Expect = 1.9e-115 Identity = 208/214 (97.20%), Postives = 209/214 (97.66%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. TrEMBL
Match: tr|A0A1S3C351|A0A1S3C351_CUCME (ethylene-responsive transcription factor 3-like OS=Cucumis melo OX=3656 GN=LOC103496350 PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 8.9e-73 Identity = 149/221 (67.42%), Postives = 170/221 (76.92%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. TrEMBL
Match: tr|A0A0A0KBH0|A0A0A0KBH0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G167230 PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 8.9e-73 Identity = 149/221 (67.42%), Postives = 170/221 (76.92%), Query Frame = 0
BLAST of CsaV3_6G037810.1 vs. TrEMBL
Match: tr|A0A2N9ESW2|A0A2N9ESW2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5827 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 1.9e-54 Identity = 132/222 (59.46%), Postives = 152/222 (68.47%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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