CsaV3_6G013600.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G013600.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	auxin-responsive protein SAUR71
Location	chr6 : 9736464 .. 9740433 (-)
Sequence length	480

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTCCATTGTAAGGCGAGGCGACATGTCGGTACCCGTTGCCGGCTAGTTCACATCCAAAATCTGGTATGTAGCTCACCACTAGATGTGGATTGGAAGGTGTGTATCACGGGGTAAGGAGGAATGTGGTGGAGTTTTTAAACATTGGGCAATGCGTTCAAAGAGGCAATCCCAGTCACGCAACTCTACTCAAATCCACTACCCAAATAACTTTACTAATATATATTTCTTCTCTTACTTTCTTTTCTTTTTTTTCTTTTTTTCTTTTATATATATATATATAAGATCTATTACCTACAATATATATTAGAATTGTCCAATAACCTTATTAACAAATGTTGTAAAGGTGAACTTACAACAAATGAATGATTTATGGTGAACCGTAGAGTTATAAATGAATGATTATTAAAGAAAAGAAAGGAAATACAAAGAAATAGGATGTAAGGGATAAAGCATATGGACCAATGAGTAAATCGGAAATTGCGCCACCGGGGTCCGCCGATCTTGGCCGGGCCTCCCCCAAACTTTTTTATTGATTGATGGATTTATTTATTTATCTATTTATACATCATTTATATTAATTAATGTATTTATTTTATAATGAAAAGTCTGCCAAATGGAGATATTAAAAAGAAATTCAAAATAAGATATTAACGAAAACGACAACCTTAGTGGGGCTGTCTAAATTCCAAACACAAAACCTTAGACTATTCCTTACAAAATAGTCATATTAATGTTTCCTTCTTACTATCTAATTCCAAAGAGAAAATAAAAAGGACATTTCATTTATGGCCGGCATCTACTCTTTCTTAGTATATATAACCAACCAATTATTTCTTTTTCCCTCACTTACTTATCGCTTTCTTCCCACCATTCAAATTATAATTCATTTACCTCCAATTTTCTTATACAATTTGATCCACCACTCAAACATAACAATATCACAAGTAAACAGAAAAGTCATTAATATCTCTTTTTTTTTTTACATGTCGTTGACTTAATTAGTATTAAAATAATTAGAAACGTGTAGAATATTCAAAATTTTTGAATAGTACGATCATGTGACTTGTTAATAAATTAAATTCTCTTTTTCGAAGAAACTGGAATGAAATGAAATTGAGATGTTTGAAGATTTGAAATTGAATTTATTAATTGAAAATAGCTTTCAAATAATAGTATTATTTGATAATGTATCTGTAGTTATAAGTTATAATTAGATTAGAAAAAAGCCAAATATTTTGGTATATATATATTGACCATAAAAATGGGAGAAATTGTCGGATGTCGACGTGGCTGTAAACTACGGCATTTAATTCAAACTTTATTCTTAATTAATAATAATCAATTAAACAAAGCTTCAATCCTTACGCTAAGATTAATTACTTAATTAATATGTTATAATTTTCGGCGTCAGTGCGTGTGGTAAATATAAATCAGATTATGTCTTCAAAAACATTATTAAATAAATAAATAAATCAGGTTAGTAATCTAAGTTGATATTTAAAATTACTTTGCATGTTCTTCCCGTAAAAAAAACAACTTATAATATCATTTGGACTATTTTTAAATAGAAATAAATAAATAAATATATTTATAAACTATAATAAAATATCACACTTTATTTATATGACCAACGTTAATAGACTATTATTATCTATATATATTTATATCGTGATACACAAATTATAAATTTATCTTGGTCTATTGTGGTCTATCACACTTACATTACGGTATTTTATTATATTTGAAAATATTTTTAAAAGTTTGGTCATTCTTTTATTTATTATTATCCTTTTAAATTCTTATAAGCTTTAATTATAAATGATGTATTTAATTTAAAATATATATGTTCTTAAAAGTGTCACGCTAAAAATTACTAAATTATAAATTTAATTCTTAAATTTGTTGTTATGGTATTTATTTACTTAATACGCTTACCTAGCTATAAGGTTAAATGAAACCTTGCTTAAAGTTTAATATTTGATTATTTTGTCCAACATACATTTTTTTTAAAAAGTCTATTAGCGTTTATAGATTTATATGGTTTATCACTTATATACCACCAACCATATAGGTTATTAATGGCAGACTGTCAAAATAGAAAATGGTGACTATTTGTAAATGATATATATAATAACTACAAGTTTGACAATATATAAGTTACTTAATGGTAGTTAGTTAATTTTTTCCTTTTATAAATTCAAATTATCACCCCTCTGCTCATACTCCAACCCTATACTACCAATAATCTCTTTTAGCATAGTAAAGAGGTGATTTTCTTTTAAATTCAAACAAGTGCAATTAATGTTTTGACTTCGATCGTGAGGATACAATTCTTCTACTAGTTAGATTATGCTTTAAATCTATATAAAAATAACTAAAACGAGTTTAACTCCACTATAATTTGGTATGCTATTTGTTGTGGGTAAAACAAGAAGTTTGATATCATCCCCCAATTATCGTATTAAATAAATCTATAAAAAATTAATAGACCAAAGTTGTCAAGATTTTGGATATTAGCTTGTAGTTAAAGGTAAAAAAAAGATATTGTTTAAAGCATTTTCAAAGTTAAGAATTCTATCACGTACATGATTTATTGACTTGATTACCTTGATTAATGGTTAAGAGATAGATGGTTTCAATCCATATTTATTCCCTATTTAGAATTCAATATCCTATGGAAATTCTTGATACAAAAATGTTATAGGATCAAATATATTGTGGTGTACGATTAGTTGAACATTCGTATAGGTATAAAACTAGTAATGATTTCAATTTAGTTTATGTAGGTTTGAAAATGTTAAAAGTTATATAATTGATATTTAAGTTTTATTTAAATTTGATGTATAGATTTTAAAATAGTATACTTGTAACGTTAAATCTTTATTAAATAATTGATTTAAATAAAATAAAATAAGAAACATCTTGGAAACAGAGGTTAAATTTTTTTAAAAAAAGAAAAAGAAGAAGAAGAAATTGAGAAGCATAAACATATAAGCAATTGGAAGCAGGGAAAGAGAAGGTAAAGGTAAAAGATGGAAAGAGTAAAAAAAAAAAAAAAAAAAAAGTTAGTAGAAGTATAAGAAAAAGAAAAAGAAAAAGAATAGAAAAAGATAAGAAAAGAAAAACAAAATAAGCAAAGGGATTCCAACCTGAAAACCCAAATATGGTAAGAAAAAGTGGGTTAGCAAAATAAAAAAGAATTAAAAAAGAAAAAAGAAAAAAGAAAAAAAAAAGAGTGGGTAAAGGAAGAAAAAAAGGAGGAGGTTTGATCTGTACCTTCAAAGTACGCTTTACCTGTACCTCTCACAAAGTCTCAACCTTCCTTCCTCCCTCCTCTTCCTTATTTCATCATCATAATCATAAATTATTCATTTTTCCTTTTTTTTCTTTTTTCTTTTTTCCTTTTTTCTTTTCTATTTCAATTCTTTCTATTACAAATTAAAACCAATTTCCCCATTCTCCCACTTTATATTCTCATTCCTTCCCTTCCTCTGTTCCACAAACCCCCAAATTCCTCTGTTTCTCTCCTCATCTCTTTTCCGTTATGAAGCAGCTCATCCGCCGTCTCTCCCGTGTCGCCGACTCCTCCCAATCTCACTACTGCCTCCTCCGCACCCCCGACCAACGCCCCGCTCGTGCTCACTCCTTCCGTGCCGCCGCCGCCAACAAATTCCGTCGCTCCAGATCCGAAGGCGCCCTTCCGGTTCCCCAAGGTCACGTCCCCGTCTACGTCGGCGACGAGATGGAACGCTTCGCGGTTAGTGCCGAATTACTCAACCATCCGGTTTTCGTAACCTTACTCGACAAATCGGCTCAAGAGTACGGGTATGAACAGAAAGGAGTCCTTCGAATCCCCTGTCATGTCCTCCTTTTCGAACGTGTACTTGAAGCTATTAGAATCGGTGACCCCGATTCACGTGATCTTCACGATCTTCTCTCTTCTCTCTCCGGCGATTTCCTCTAG

mRNA sequence

ATGAAGTTCCATTGTAAGGCGAGGCGACATGTCGGTACCCGTTGCCGGCTAGTTCACATCCAAAATCTGCTCATCCGCCGTCTCTCCCGTGTCGCCGACTCCTCCCAATCTCACTACTGCCTCCTCCGCACCCCCGACCAACGCCCCGCTCGTGCTCACTCCTTCCGTGCCGCCGCCGCCAACAAATTCCGTCGCTCCAGATCCGAAGGCGCCCTTCCGGTTCCCCAAGGTCACGTCCCCGTCTACGTCGGCGACGAGATGGAACGCTTCGCGGTTAGTGCCGAATTACTCAACCATCCGGTTTTCGTAACCTTACTCGACAAATCGGCTCAAGAGTACGGGTATGAACAGAAAGGAGTCCTTCGAATCCCCTGTCATGTCCTCCTTTTCGAACGTGTACTTGAAGCTATTAGAATCGGTGACCCCGATTCACGTGATCTTCACGATCTTCTCTCTTCTCTCTCCGGCGATTTCCTCTAG

Coding sequence (CDS)

ATGAAGTTCCATTGTAAGGCGAGGCGACATGTCGGTACCCGTTGCCGGCTAGTTCACATCCAAAATCTGCTCATCCGCCGTCTCTCCCGTGTCGCCGACTCCTCCCAATCTCACTACTGCCTCCTCCGCACCCCCGACCAACGCCCCGCTCGTGCTCACTCCTTCCGTGCCGCCGCCGCCAACAAATTCCGTCGCTCCAGATCCGAAGGCGCCCTTCCGGTTCCCCAAGGTCACGTCCCCGTCTACGTCGGCGACGAGATGGAACGCTTCGCGGTTAGTGCCGAATTACTCAACCATCCGGTTTTCGTAACCTTACTCGACAAATCGGCTCAAGAGTACGGGTATGAACAGAAAGGAGTCCTTCGAATCCCCTGTCATGTCCTCCTTTTCGAACGTGTACTTGAAGCTATTAGAATCGGTGACCCCGATTCACGTGATCTTCACGATCTTCTCTCTTCTCTCTCCGGCGATTTCCTCTAG

Protein sequence

MKFHCKARRHVGTRCRLVHIQNLLIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSEGALPVPQGHVPVYVGDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGDPDSRDLHDLLSSLSGDFL

Homology

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BLAST of CsaV3_6G013600.1 vs. NCBI nr
Match: XP_004150039.1 (PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Cucumis sativus] >KGN46806.1 hypothetical protein Csa_6G137590 [Cucumis sativus])

HSP 1 Score: 274.6 bits (701), Expect = 2.1e-70
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSEGALPVPQGHVPVYV 83
           LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSEGALPVPQGHVPVYV
Sbjct: 4   LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSEGALPVPQGHVPVYV 63

Query: 84  GDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGDPD 143
           GDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGDPD
Sbjct: 64  GDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGDPD 123

Query: 144 SRDLHDLLSSLSGDFL 160
           SRDLHDLLSSLSGDFL
Sbjct: 124 SRDLHDLLSSLSGDFL 139

[Close]

BLAST of CsaV3_6G013600.1 vs. NCBI nr
Match: XP_008456308.1 (PREDICTED: auxin-responsive protein SAUR71 [Cucumis melo])

HSP 1 Score: 269.6 bits (688), Expect = 6.7e-69
Identity = 132/136 (97.06%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSEGALPVPQGHVPVYV 83
           LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRS+GA+PVPQGHVPVYV
Sbjct: 4   LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSDGAVPVPQGHVPVYV 63

Query: 84  GDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGDPD 143
           GDEMERFAVSAELLNHPVFVTLL+KSAQEYGYEQKGVLRIPCHVL+FERVLEAIRIGDPD
Sbjct: 64  GDEMERFAVSAELLNHPVFVTLLEKSAQEYGYEQKGVLRIPCHVLVFERVLEAIRIGDPD 123

Query: 144 SRDLHDLLSSLSGDFL 160
           SRDLHDLLSSLSGDFL
Sbjct: 124 SRDLHDLLSSLSGDFL 139

[Close]

BLAST of CsaV3_6G013600.1 vs. NCBI nr
Match: XP_023532512.1 (auxin-responsive protein SAUR71-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.8 bits (608), Expect = 1.3e-59
Identity = 121/141 (85.82%), Postives = 128/141 (90.78%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRTPD-----QRPARAHSFRAAAANKFRRSRSEGALPVPQGH 83
           LIRRLSRVADSSQSHYCLL +       +RP RAHSFRAAAANKFRRSRSEGA+PVPQGH
Sbjct: 4   LIRRLSRVADSSQSHYCLLHSHSAAAAARRPGRAHSFRAAAANKFRRSRSEGAVPVPQGH 63

Query: 84  VPVYVGDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIR 143
           VPVYVGDEMERFAVSAELLNHPVFVTLL+KSAQEYGYEQKGVLRIPCHVL+FERVLEAIR
Sbjct: 64  VPVYVGDEMERFAVSAELLNHPVFVTLLEKSAQEYGYEQKGVLRIPCHVLVFERVLEAIR 123

Query: 144 IGDPDSRDLHDLLSSLSGDFL 160
           IGD +SRDL  +LSSLSG FL
Sbjct: 124 IGDQESRDLQSILSSLSGGFL 144

[Close]

BLAST of CsaV3_6G013600.1 vs. NCBI nr
Match: XP_022970846.1 (auxin-responsive protein SAUR71-like [Cucurbita maxima])

HSP 1 Score: 238.0 bits (606), Expect = 2.2e-59
Identity = 120/140 (85.71%), Postives = 128/140 (91.43%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRTPD----QRPARAHSFRAAAANKFRRSRSEGALPVPQGHV 83
           LIRRLSRVADSSQSHYCLL +      +RP RAHSFRAAAANKFRRSRSEGA+PVPQGHV
Sbjct: 4   LIRRLSRVADSSQSHYCLLHSHSAAAARRPGRAHSFRAAAANKFRRSRSEGAVPVPQGHV 63

Query: 84  PVYVGDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRI 143
           PVYVGDEMERF+VSAELLNHPVFVTLL+KSAQEYGYEQKGVLRIPCHVL+FERVLEAIRI
Sbjct: 64  PVYVGDEMERFSVSAELLNHPVFVTLLEKSAQEYGYEQKGVLRIPCHVLVFERVLEAIRI 123

Query: 144 GDPDSRDLHDLLSSLSGDFL 160
           GD +SRDL  +LSSLSG FL
Sbjct: 124 GDQESRDLQSILSSLSGGFL 143

[Close]

BLAST of CsaV3_6G013600.1 vs. NCBI nr
Match: XP_022985780.1 (auxin-responsive protein SAUR71-like [Cucurbita maxima] >XP_023512929.1 auxin-responsive protein SAUR71-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.9 bits (603), Expect = 4.8e-59
Identity = 122/140 (87.14%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRTPD----QRPARAHSFRAAAANKFRRSRSEGALPVPQGHV 83
           LIRRLSRVADSSQS YCLLRT      +RP RAHSFRAAAA+KFRRSR EGA+PVPQGHV
Sbjct: 4   LIRRLSRVADSSQSSYCLLRTDSSAAARRPGRAHSFRAAAASKFRRSRPEGAMPVPQGHV 63

Query: 84  PVYVGDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRI 143
           PVYVGDEMERFAVSAELLNHPVFVTLL+KSAQEYGYEQKGVLRIPCHVL+FERVLEAIRI
Sbjct: 64  PVYVGDEMERFAVSAELLNHPVFVTLLEKSAQEYGYEQKGVLRIPCHVLVFERVLEAIRI 123

Query: 144 GDPDSRDLHDLLSSLSGDFL 160
           GD DS  L DLLSSLSGDFL
Sbjct: 124 GDEDSIYLQDLLSSLSGDFL 143

[Close]

BLAST of CsaV3_6G013600.1 vs. TAIR10
Match: AT3G12830.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 157.5 bits (397), Expect = 6.7e-39
Identity = 83/129 (64.34%), Postives = 105/129 (81.40%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRTPDQRPA-RAHSFRAAAANKFRRSRSEGALPVPQGHVPVY 83
           LIRRLSRVADS+Q  Y LLR+  QRP+ R+ SF  ++    RRS+ + +  VP+GHVPVY
Sbjct: 4   LIRRLSRVADSAQ--YSLLRSDSQRPSRRSESFLRSSVT--RRSKKQTS-SVPEGHVPVY 63

Query: 84  VGDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGDP 143
           VGDEMERF VSAELLNHPVF+ LL++SAQEYGYEQKGVL+IPCHVL+FER++E++R+G P
Sbjct: 64  VGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFERIMESLRLGLP 123

Query: 144 DSRDLHDLL 152
              D+ DL+
Sbjct: 124 VPIDVQDLI 127

[Close]

BLAST of CsaV3_6G013600.1 vs. TAIR10
Match: AT1G16510.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 139.0 bits (349), Expect = 2.5e-33
Identity = 78/138 (56.52%), Postives = 93/138 (67.39%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSEGALPVPQGHVPVYV 83
           LIRRLSRVADSS        T   R  R H    A    +    +     VP GHVPVYV
Sbjct: 4   LIRRLSRVADSSSEFSIRRSTSSFRNRRGHHRLHAPPPPWSICPARRVNTVPAGHVPVYV 63

Query: 84  GDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGD-P 143
           G+EMERF VSAEL+NHP+FV LL++SAQEYGY QKGVL IPCHV++FERV+E +R+G   
Sbjct: 64  GEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERVVETLRLGGFE 123

Query: 144 DSRDLHDLLSS-LSGDFL 160
            S DL +L++S LSGD L
Sbjct: 124 GSGDLENLVASLLSGDEL 141

[Close]

BLAST of CsaV3_6G013600.1 vs. TAIR10
Match: AT1G56150.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 138.3 bits (347), Expect = 4.2e-33
Identity = 74/120 (61.67%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSEGALPVPQGHVPVYV 83
           LIRRLSRVADS+Q  Y LLR+  QR               R  + +    VP+GHVPVYV
Sbjct: 4   LIRRLSRVADSTQ--YSLLRSESQRG--------------RTKKEKHKSWVPEGHVPVYV 63

Query: 84  GDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGDPD 143
           G EMERF V+AELLNHPVFV LL +SAQEYGYEQ+GVLRIPCHVL+FER+LE++R+G  D
Sbjct: 64  GHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERILESLRLGLAD 107

[Close]

BLAST of CsaV3_6G013600.1 vs. TAIR10
Match: AT1G79130.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 126.7 bits (317), Expect = 1.3e-29
Identity = 72/134 (53.73%), Postives = 93/134 (69.40%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSEGALPVPQGHVPVYV 83
           LIRRLSR+ADSS  +    R+ D      H     +++ F   R+  A  VP GHVPV V
Sbjct: 4   LIRRLSRIADSSSCN--RNRSGDIH----HPTSTYSSSVFLVKRATVASSVPSGHVPVNV 63

Query: 84  GDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGDPD 143
           G++ ERF VSAELLNHPVFV LL++SAQEYGY QKGVL IPC+V +FE+V+E++R G  D
Sbjct: 64  GEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVVESLRSGIAD 123

Query: 144 SRDLHDLLSSLSGD 158
             D  +L++SLSG+
Sbjct: 124 --DTSELIASLSGE 129

[Close]

BLAST of CsaV3_6G013600.1 vs. TAIR10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 71.2 bits (173), Expect = 6.3e-13
Identity = 30/76 (39.47%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 74  VPQGHVPVYVGDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERV 133
           VP+G++ VYVG E+ RF +    L+H +F  LL+K+ +EYG++  G L IPC V  F+ +
Sbjct: 79  VPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEVETFKYL 138

Query: 134 LEAIRIGDPDSRDLHD 150
           L+ I     D     D
Sbjct: 139 LKCIENHPKDDTSAED 154

[Close]

BLAST of CsaV3_6G013600.1 vs. Swiss-Prot
Match: sp|Q9LTV3|SAU72_ARATH (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-37
Identity = 83/129 (64.34%), Postives = 105/129 (81.40%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRTPDQRPA-RAHSFRAAAANKFRRSRSEGALPVPQGHVPVY 83
           LIRRLSRVADS+Q  Y LLR+  QRP+ R+ SF  ++    RRS+ + +  VP+GHVPVY
Sbjct: 4   LIRRLSRVADSAQ--YSLLRSDSQRPSRRSESFLRSSVT--RRSKKQTS-SVPEGHVPVY 63

Query: 84  VGDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGDP 143
           VGDEMERF VSAELLNHPVF+ LL++SAQEYGYEQKGVL+IPCHVL+FER++E++R+G P
Sbjct: 64  VGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFERIMESLRLGLP 123

Query: 144 DSRDLHDLL 152
              D+ DL+
Sbjct: 124 VPIDVQDLI 127

[Close]

BLAST of CsaV3_6G013600.1 vs. Swiss-Prot
Match: sp|Q9SA49|SAU41_ARATH (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.5e-32
Identity = 78/138 (56.52%), Postives = 93/138 (67.39%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSEGALPVPQGHVPVYV 83
           LIRRLSRVADSS        T   R  R H    A    +    +     VP GHVPVYV
Sbjct: 4   LIRRLSRVADSSSEFSIRRSTSSFRNRRGHHRLHAPPPPWSICPARRVNTVPAGHVPVYV 63

Query: 84  GDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGD-P 143
           G+EMERF VSAEL+NHP+FV LL++SAQEYGY QKGVL IPCHV++FERV+E +R+G   
Sbjct: 64  GEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERVVETLRLGGFE 123

Query: 144 DSRDLHDLLSS-LSGDFL 160
            S DL +L++S LSGD L
Sbjct: 124 GSGDLENLVASLLSGDEL 141

[Close]

BLAST of CsaV3_6G013600.1 vs. Swiss-Prot
Match: sp|Q9SGU2|SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.6e-32
Identity = 74/120 (61.67%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSEGALPVPQGHVPVYV 83
           LIRRLSRVADS+Q  Y LLR+  QR               R  + +    VP+GHVPVYV
Sbjct: 4   LIRRLSRVADSTQ--YSLLRSESQRG--------------RTKKEKHKSWVPEGHVPVYV 63

Query: 84  GDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGDPD 143
           G EMERF V+AELLNHPVFV LL +SAQEYGYEQ+GVLRIPCHVL+FER+LE++R+G  D
Sbjct: 64  GHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERILESLRLGLAD 107

[Close]

BLAST of CsaV3_6G013600.1 vs. Swiss-Prot
Match: sp|O64538|SAU40_ARATH (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.3e-28
Identity = 72/134 (53.73%), Postives = 93/134 (69.40%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSEGALPVPQGHVPVYV 83
           LIRRLSR+ADSS  +    R+ D      H     +++ F   R+  A  VP GHVPV V
Sbjct: 4   LIRRLSRIADSSSCN--RNRSGDIH----HPTSTYSSSVFLVKRATVASSVPSGHVPVNV 63

Query: 84  GDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGDPD 143
           G++ ERF VSAELLNHPVFV LL++SAQEYGY QKGVL IPC+V +FE+V+E++R G  D
Sbjct: 64  GEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVVESLRSGIAD 123

Query: 144 SRDLHDLLSSLSGD 158
             D  +L++SLSG+
Sbjct: 124 --DTSELIASLSGE 129

[Close]

BLAST of CsaV3_6G013600.1 vs. Swiss-Prot
Match: sp|O65695|SAU50_ARATH (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.7e-10
Identity = 28/67 (41.79%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 72  LPVPQGHVPVYVGDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFE 131
           L VP+GH PVYVG+   R+ V    L HP F +LL ++ +E+G++    L IPC  L+F+
Sbjct: 41  LDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQ 100

Query: 132 RVLEAIR 139
            +   IR
Sbjct: 101 TLTSMIR 107

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BLAST of CsaV3_6G013600.1 vs. TrEMBL
Match: tr|A0A0A0KGB4|A0A0A0KGB4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G137590 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.4e-70
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSEGALPVPQGHVPVYV 83
           LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSEGALPVPQGHVPVYV
Sbjct: 4   LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSEGALPVPQGHVPVYV 63

Query: 84  GDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGDPD 143
           GDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGDPD
Sbjct: 64  GDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGDPD 123

Query: 144 SRDLHDLLSSLSGDFL 160
           SRDLHDLLSSLSGDFL
Sbjct: 124 SRDLHDLLSSLSGDFL 139

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BLAST of CsaV3_6G013600.1 vs. TrEMBL
Match: tr|A0A1S3C2X3|A0A1S3C2X3_CUCME (auxin-responsive protein SAUR71 OS=Cucumis melo OX=3656 GN=LOC103496295 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.4e-69
Identity = 132/136 (97.06%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSEGALPVPQGHVPVYV 83
           LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRS+GA+PVPQGHVPVYV
Sbjct: 4   LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSDGAVPVPQGHVPVYV 63

Query: 84  GDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGDPD 143
           GDEMERFAVSAELLNHPVFVTLL+KSAQEYGYEQKGVLRIPCHVL+FERVLEAIRIGDPD
Sbjct: 64  GDEMERFAVSAELLNHPVFVTLLEKSAQEYGYEQKGVLRIPCHVLVFERVLEAIRIGDPD 123

Query: 144 SRDLHDLLSSLSGDFL 160
           SRDLHDLLSSLSGDFL
Sbjct: 124 SRDLHDLLSSLSGDFL 139

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BLAST of CsaV3_6G013600.1 vs. TrEMBL
Match: tr|M5WJF7|M5WJF7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G136800 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.6e-45
Identity = 102/138 (73.91%), Postives = 111/138 (80.43%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRTPD---QRPARAHSFRAAAANKFRRSRSEGALP-VPQGHV 83
           LIRRLSRVADSSQ  YCLLR+ D    RP R+ SFR     K RR RS    P VP+GHV
Sbjct: 4   LIRRLSRVADSSQ--YCLLRSADTASSRPRRSESFRV----KLRRRRSSAGEPVVPEGHV 63

Query: 84  PVYVGDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRI 143
           PVYVGDEMERF V AELLNHPVFV LL+KSAQEYGYEQKGVLRIPCHV++FERVLEA+R+
Sbjct: 64  PVYVGDEMERFVVHAELLNHPVFVELLNKSAQEYGYEQKGVLRIPCHVIVFERVLEALRL 123

Query: 144 GDPDSRDLHDLLSSLSGD 158
           G P SRDLHDLLSS+S D
Sbjct: 124 GQPPSRDLHDLLSSISDD 135

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BLAST of CsaV3_6G013600.1 vs. TrEMBL
Match: tr|A0A2I4FST2|A0A2I4FST2_9ROSI (auxin-responsive protein SAUR71-like OS=Juglans regia OX=51240 GN=LOC109001765 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.2e-44
Identity = 104/137 (75.91%), Postives = 112/137 (81.75%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRT-PDQ--RPARAHSFRAAAANKFRRSRSEGALPVPQGHVP 83
           LIRRLSRVADSSQ  YCLL++ PDQ  +P R  SFRA    K RRS S   + VPQGHVP
Sbjct: 4   LIRRLSRVADSSQ--YCLLQSNPDQGSQPRRVESFRA----KLRRSSSNSPV-VPQGHVP 63

Query: 84  VYVGDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIG 143
           VYVGDEMERF VSAELLNHPVFV LL+KSAQEYGYEQKGVLRIPCHVL+FERVLEA+R+G
Sbjct: 64  VYVGDEMERFVVSAELLNHPVFVKLLNKSAQEYGYEQKGVLRIPCHVLVFERVLEALRLG 123

Query: 144 DPDSRDLHDLLSSLSGD 158
              SRD HDLLSSLS D
Sbjct: 124 HDHSRDFHDLLSSLSSD 133

[Close]

BLAST of CsaV3_6G013600.1 vs. TrEMBL
Match: tr|A0A1S3CSH0|A0A1S3CSH0_CUCME (auxin-responsive protein SAUR71-like OS=Cucumis melo OX=3656 GN=LOC103504274 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 5.5e-43
Identity = 98/132 (74.24%), Postives = 106/132 (80.30%), Query Frame = 0


Query: 24  LIRRLSRVADSSQSHYCLLRTPDQRPARAHSFRAAAANKFRRSRSEGALPVPQGHVPVYV 83
           LIRRLSRVADSSQ  YCLLR+     A      AAAA K RRSR   +  VPQGHVPVYV
Sbjct: 4   LIRRLSRVADSSQ--YCLLRSDSPSSA------AAAATKLRRSRILRSSTVPQGHVPVYV 63

Query: 84  GDEMERFAVSAELLNHPVFVTLLDKSAQEYGYEQKGVLRIPCHVLLFERVLEAIRIGDPD 143
           G+EMERF VSA+LLNHPVF+ LLDKSAQEYGYEQKGVL IPCHVLLFERVLEA+R+GD D
Sbjct: 64  GEEMERFVVSAQLLNHPVFIELLDKSAQEYGYEQKGVLHIPCHVLLFERVLEALRLGDYD 123

Query: 144 SRDLHDLLSSLS 156
           SR L DLLS+LS
Sbjct: 124 SRHLQDLLSNLS 127

The following BLAST results are available for this feature:

BLAST of CsaV3_6G013600.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150039.1	2.1e-70	100.00	PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Cucumis sativus] >KGN...	[more]
XP_008456308.1	6.7e-69	97.06	PREDICTED: auxin-responsive protein SAUR71 [Cucumis melo]	[more]
XP_023532512.1	1.3e-59	85.82	auxin-responsive protein SAUR71-like [Cucurbita pepo subsp. pepo]	[more]
XP_022970846.1	2.2e-59	85.71	auxin-responsive protein SAUR71-like [Cucurbita maxima]	[more]
XP_022985780.1	4.8e-59	87.14	auxin-responsive protein SAUR71-like [Cucurbita maxima] >XP_023512929.1 auxin-re...	[more]

BLAST of CsaV3_6G013600.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12830.1	6.7e-39	64.34	SAUR-like auxin-responsive protein family	[more]
AT1G16510.1	2.5e-33	56.52	SAUR-like auxin-responsive protein family	[more]
AT1G56150.1	4.2e-33	61.67	SAUR-like auxin-responsive protein family	[more]
AT1G79130.1	1.3e-29	53.73	SAUR-like auxin-responsive protein family	[more]
AT3G43120.1	6.3e-13	39.47	SAUR-like auxin-responsive protein family	[more]

BLAST of CsaV3_6G013600.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LTV3\|SAU72_ARATH	1.2e-37	64.34	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=2 S...	[more]
sp\|Q9SA49\|SAU41_ARATH	4.5e-32	56.52	Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S...	[more]
sp\|Q9SGU2\|SAU71_ARATH	7.6e-32	61.67	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]
sp\|O64538\|SAU40_ARATH	2.3e-28	53.73	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]
sp\|O65695\|SAU50_ARATH	3.7e-10	41.79	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]

BLAST of CsaV3_6G013600.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KGB4\|A0A0A0KGB4_CUCSA	1.4e-70	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G137590 PE=4 SV=1	[more]
tr\|A0A1S3C2X3\|A0A1S3C2X3_CUCME	4.4e-69	97.06	auxin-responsive protein SAUR71 OS=Cucumis melo OX=3656 GN=LOC103496295 PE=4 SV=...	[more]
tr\|M5WJF7\|M5WJF7_PRUPE	2.6e-45	73.91	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G136800 PE=4 SV=1	[more]
tr\|A0A2I4FST2\|A0A2I4FST2_9ROSI	2.2e-44	75.91	auxin-responsive protein SAUR71-like OS=Juglans regia OX=51240 GN=LOC109001765 P...	[more]
tr\|A0A1S3CSH0\|A0A1S3CSH0_CUCME	5.5e-43	74.24	auxin-responsive protein SAUR71-like OS=Cucumis melo OX=3656 GN=LOC103504274 PE=...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_6G013600	CsaV3_6G013600	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G013600.1.cds2	CsaV3_6G013600.1.cds2	CDS
CsaV3_6G013600.1.cds1	CsaV3_6G013600.1.cds1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G013600.1.exon2	CsaV3_6G013600.1.exon2	exon
CsaV3_6G013600.1.exon1	CsaV3_6G013600.1.exon1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G013600.1	CsaV3_6G013600.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 57..136 e-value: 2.6E-28 score: 97.9
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 24..153
None	No IPR available	PANTHER	PTHR31374:SF37	AUXIN-RESPONSIVE PROTEIN SAUR40-RELATED	coord: 24..153