CsaV3_6G008760.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGTCCACTTCCATTTCCATTTTTGCAAAAAATCGTAAGAAAAGGATGTGGTCATTCAGAGTCGCCGTCGACGATATGAAGGTTTTGATAGATCCGTTGATAACATTGGGATTGGTGGATGTAATGGCGGATGCAATATTTTCACCGGACACGTTTTGCATAATGGCGGATTCGGATGCTTCCATTCACAGCGCCTTCGGAGTTCAACTCTGGCCTCCATTCTTCGACAGCTTCTACTCCGACGACATTCGTCAACTGTTCTGGTTCCGCCTTACTCATCTTTTCCCTCTCGCCGTAGAATTGCTAGAATCTGGTTACACTTCTCTAACCTTCTCTATCGAACGCTTCCGTTACAATTACGCCCAATTCAAATTCGAAGGACCGAACGGTAAGTCTTCTTCTACTTCTTCTTTAATTCTTTCTTTTTTTTTCAAGATTTTTATTTATTTGATTTCTTGAATGTAATTCTGTTTTCTAGGGCTTCTCCGCGATGTTAATTTCCTATTGACTCCGGTCGTCCGTCCCTTGAGGATTGGCCAAATCGATCTATCTGCTTTTGTTTCCATGGATTCTGAAGAATTCTCCAACATCATTTCTGAATATCATATGTTTGATTACGGTAAATTACTACATTTTTTGTCAATTTCAATGTTAGTCAATAGGGAAACCCTAAACCCTTATTATTATTTACAGTTGAAGTTATTATAACGAGCAGACGGGTGTCATTCTCTTATGCAATTATACAAGAGACAATTATTACTCCAGAGGTATATGATTTTAATTTAGAAGTTTGAGGATGTTAATTAATGAATTGATATAAAAGTATGGCTTAATTGTTGGTAATAATTAATGTAGGATGGGCAATGCCTAATTGGGGGTGTTAGAGCACCAAATCAAGTTCAGTTCATAATTACTATGAGTCAACCAGATGCTTTCTATCATTTTGCAAGTCAATCGAAGAGAATATGGCTCTTTAAGGAAGTTAATTCTACCAAAGGAATAATTACTGCCCCTCTTGGATTGTATGGTCGACTTGTCTCTTTCTTTTGTGATGTCACTGCATTCCCTAT TCCACTTCCATTTCCATTTTTGCAAAAAATCGTAAGAAAAGGATGTGGTCATTCAGAGTCGCCGTCGACGATATGAAGGTTTTGATAGATCCGTTGATAACATTGGGATTGGTGGATGTAATGGCGGATGCAATATTTTCACCGGACACGTTTTGCATAATGGCGGATTCGGATGCTTCCATTCACAGCGCCTTCGGAGTTCAACTCTGGCCTCCATTCTTCGACAGCTTCTACTCCGACGACATTCGTCAACTGTTCTGGTTCCGCCTTACTCATCTTTTCCCTCTCGCCGTAGAATTGCTAGAATCTGGTTACACTTCTCTAACCTTCTCTATCGAACGCTTCCGTTACAATTACGCCCAATTCAAATTCGAAGGACCGAACGGGCTTCTCCGCGATGTTAATTTCCTATTGACTCCGGTCGTCCGTCCCTTGAGGATTGGCCAAATCGATCTATCTGCTTTTGTTTCCATGGATTCTGAAGAATTCTCCAACATCATTTCTGAATATCATATGTTTGATTACGTTGAAGTTATTATAACGAGCAGACGGGTGTCATTCTCTTATGCAATTATACAAGAGACAATTATTACTCCAGAGGATGGGCAATGCCTAATTGGGGGTGTTAGAGCACCAAATCAAGTTCAGTTCATAATTACTATGAGTCAACCAGATGCTTTCTATCATTTTGCAAGTCAATCGAAGAGAATATGGCTCTTTAAGGAAGTTAATTCTACCAAAGGAATAATTACTGCCCCTCTTGGATTGTATGGTCGACTTGTCTCTTTCTTTTGTGATGTCACTGCATTCCCTAT TCCACTTCCATTTCCATTTTTGCAAAAAATCGTAAGAAAAGGATGTGGTCATTCAGAGTCGCCGTCGACGATATGAAGGTTTTGATAGATCCGTTGATAACATTGGGATTGGTGGATGTAATGGCGGATGCAATATTTTCACCGGACACGTTTTGCATAATGGCGGATTCGGATGCTTCCATTCACAGCGCCTTCGGAGTTCAACTCTGGCCTCCATTCTTCGACAGCTTCTACTCCGACGACATTCGTCAACTGTTCTGGTTCCGCCTTACTCATCTTTTCCCTCTCGCCGTAGAATTGCTAGAATCTGGTTACACTTCTCTAACCTTCTCTATCGAACGCTTCCGTTACAATTACGCCCAATTCAAATTCGAAGGACCGAACGGGCTTCTCCGCGATGTTAATTTCCTATTGACTCCGGTCGTCCGTCCCTTGAGGATTGGCCAAATCGATCTATCTGCTTTTGTTTCCATGGATTCTGAAGAATTCTCCAACATCATTTCTGAATATCATATGTTTGATTACGTTGAAGTTATTATAACGAGCAGACGGGTGTCATTCTCTTATGCAATTATACAAGAGACAATTATTACTCCAGAGGATGGGCAATGCCTAATTGGGGGTGTTAGAGCACCAAATCAAGTTCAGTTCATAATTACTATGAGTCAACCAGATGCTTTCTATCATTTTGCAAGTCAATCGAAGAGAATATGGCTCTTTAAGGAAGTTAATTCTACCAAAGGAATAATTACTGCCCCTCTTGGATTGTATGGTCGACTTGTCTCTTTCTTTTGTGATGTCACTGCATTCCCTAT STSISIFAKNRKKRMWSFRVAVDDMKVLIDPLITLGLVDVMADAIFSPDTFCIMADSDASIHSAFGVQLWPPFFDSFYSDDIRQLFWFRLTHLFPLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDVNFLLTPVVRPLRIGQIDLSAFVSMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQETIITPEDGQCLIGGVRAPNQVQFIITMSQPDAFYHFASQSKRIWLFKEVNSTKGIITAPLGLYGRLVSFFCDVTAFPX
BLAST of CsaV3_6G008760.1 vs. NCBI nr
Match: KGN46521.1 (hypothetical protein Csa_6G106730 [Cucumis sativus]) HSP 1 Score: 509.6 bits (1311), Expect = 6.5e-141 Identity = 253/257 (98.44%), Postives = 255/257 (99.22%), Query Frame = 0
BLAST of CsaV3_6G008760.1 vs. NCBI nr
Match: XP_011658399.1 (PREDICTED: uncharacterized protein LOC105435987 [Cucumis sativus]) HSP 1 Score: 509.6 bits (1311), Expect = 6.5e-141 Identity = 253/257 (98.44%), Postives = 255/257 (99.22%), Query Frame = 0
BLAST of CsaV3_6G008760.1 vs. NCBI nr
Match: XP_004138491.2 (PREDICTED: uncharacterized protein LOC101219791 [Cucumis sativus] >KGN45689.1 hypothetical protein Csa_6G006750 [Cucumis sativus]) HSP 1 Score: 451.8 bits (1161), Expect = 1.6e-123 Identity = 220/257 (85.60%), Postives = 242/257 (94.16%), Query Frame = 0
BLAST of CsaV3_6G008760.1 vs. NCBI nr
Match: XP_008459734.1 (PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo]) HSP 1 Score: 298.5 bits (763), Expect = 2.3e-77 Identity = 147/253 (58.10%), Postives = 186/253 (73.52%), Query Frame = 0
BLAST of CsaV3_6G008760.1 vs. NCBI nr
Match: XP_004146827.2 (PREDICTED: uncharacterized protein LOC101206630 isoform X1 [Cucumis sativus] >KGN59826.1 hypothetical protein Csa_3G848840 [Cucumis sativus]) HSP 1 Score: 291.6 bits (745), Expect = 2.8e-75 Identity = 143/255 (56.08%), Postives = 188/255 (73.73%), Query Frame = 0
BLAST of CsaV3_6G008760.1 vs. TrEMBL
Match: tr|A0A0A0KFM5|A0A0A0KFM5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106730 PE=4 SV=1) HSP 1 Score: 509.6 bits (1311), Expect = 4.3e-141 Identity = 253/257 (98.44%), Postives = 255/257 (99.22%), Query Frame = 0
BLAST of CsaV3_6G008760.1 vs. TrEMBL
Match: tr|A0A0A0KA18|A0A0A0KA18_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006750 PE=4 SV=1) HSP 1 Score: 451.8 bits (1161), Expect = 1.1e-123 Identity = 220/257 (85.60%), Postives = 242/257 (94.16%), Query Frame = 0
BLAST of CsaV3_6G008760.1 vs. TrEMBL
Match: tr|A0A1S3CBB9|A0A1S3CBB9_CUCME (uncharacterized protein LOC103498776 OS=Cucumis melo OX=3656 GN=LOC103498776 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.5e-77 Identity = 147/253 (58.10%), Postives = 186/253 (73.52%), Query Frame = 0
BLAST of CsaV3_6G008760.1 vs. TrEMBL
Match: tr|A0A0A0LIF2|A0A0A0LIF2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848840 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 1.9e-75 Identity = 143/255 (56.08%), Postives = 188/255 (73.73%), Query Frame = 0
BLAST of CsaV3_6G008760.1 vs. TrEMBL
Match: tr|A0A0A0K7E0|A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002300 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15 Identity = 71/253 (28.06%), Postives = 120/253 (47.43%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
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