CsaV3_6G007050.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATATGATATAACTCAAGAGAGACTGTAATAAAGAATATCAAAGAGAGATCTAGAGAGAGAGAGAGGGAGAAGGCATATTTGGTAGCCTTATTTACAAAAAATTTGAAGGCAAAAAGAAAACCCCAAGAATTCTTGTTTGGAGACTCTCTCAAACAAAGTGTCTTAAATGAGAATTTTTGGGTGTCTTTGTGAATATTACTCATCTAATCTGCAAGCTCCATATTCAAATCTAATTAGCTTGCTAAGTTGTTCATGCCAGAACCAAACACCTCAAATAATCCAAGGTACGTACTACAATTTTCTCTTCTCTCTCTTTTCAATTATATGCTTTAAATTGTTGAACTTGAATTTTGGTGATTTAAGACAATTTTCGAAGTTTTTCTTTGTGGGTTTTGTATCCAAATTGTGGCACCTCTAACTTTTCTCTACAACTTATATTATTGTGTTAAATTATGAAGGAAAATCAAAGTCTCTTTGTGGGTTTTACTGACCACCTTATTGGCTCTTTTCCTATAATATTATGTTAAAATTTTGAAGGCAATAATAATAATTGGAAGCTCTTACCTTTCTCTGCCTCTCACTATCTTTCACTGTATATTCAATCTTTCATCCCCAAATTTTCAGTCCTTTCACAATCACGAGAAAACCAACAGTAGAATTTGATGGGATCAATTATTATTAAGCTTAAGTTCACTTAGAGAGAAAATTCGATGGTTTTTTCTTTTTAAAATAGTCAGTAGAGAGTTAGATTTTTCTTTTTTCATAATTGTGAGAGTGAATTCACATCAGGGTGAAATTTGCAAACCATCAACTTTTTACTATTCATATAAACAATAGAGAAGTTTGAAAGTATTTGAAAAGTATTGAGAACTTGACTTTGGTTGGAAGAAGAAGGTGAAAATTAAAACTGGGCCATTAACGTCACTTCTTAGGTTTGGGCTTAAACTTTTGGCCCATTGTCAACTAGCCCAAAATTTAAGTAATAGTACAATTTAATTTGATAATTAAAACATAAATATAGCTTAATTTTTATAAAATTTTTCTATTATCAAAATAAACATGTCACCTTTTAATTTCATCATTGATTTTCTCAAACCACTTTGGCTTTATAGTTTTGAAGTCATTTTATTAACTTTACACATGATAACACATTTCTATTTTTCTAAGAAAAATAACACTAATTTGCTTTCCTTATACATTAGAAAATTCTTTAATTATAGTAAGATAGACTTGGCCCCAATATGTTTGAACAAGTCTTGTTTTGTTATTTGTTAGTTTGTTTTTAAACTCAACAACAACTCTAGACCTAAAGTTGGGTTTGTCCGACATCATCGAGTGAAAACAGAGCCTCCCATTCTTGGAATTTTTTTATGTACAAATTAGCTGATTCCTAGCTCTTTCGTCTCAAATTCTAACCCTTTAAAGGTTTTTCCTCTAAAGGGTCTTTCCTATTTCTCAATTGGAAAGAAAAAAAGTTAGCTTAAACTTTCGTGTTAACTGATGATTTAAGATGGAATCAGAGCAAATGCGTTGTTATTTCTTCTCCGATTAATATTCATTTCCACCACTTGTTGGATCTTTTATGATATAAGTTTTGTGTCAATTTACGAAGAAAATGGTATTTCGCAGGAAGCCGTGGTATCAAAGAGCAATGGAAATAGTGGGAACTCAATGGAAAACAACAAGTTCAAAAGCAAGAGAAATCACAATTGCAACAGCAAATGGGGCATTCAATTCCAAGGCAAATAATGGGAATAACAACAACAATAGTAGCAAGTACAACAAAATGAGAAAATGCACTTCTCTAAAGATAGCAACTTCATTCACAAGAGTATGTCTTTGTGCACCAATCTCTTCTTACAATGAAATTTTTCAACAAGCTGAAATTCCACCGAGAAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAACAATAATAATAACAATGGCAATAATACTACTAATCATATTATCACACATGAAAGAGTACTTCTTCCAAGTGCAAGACTTAGCGGCGAAAGTAGTCGACGGTTTTTTCGAGGAAAGTCTCTCACGGACGACGTTTTGATGCGGAGGTTCGTGGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTAATAAGGAAAAGGAATTTGATGAGGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTAATAGCTGAGGAAGAACAATGCCATACATTTAATATATAATAATATAGCCTCAAAAAGGAAAAGTTGTTTAATAATTTAGTTCTTAATGTCAAGACTTGTAAAGTTTTGAACTTTCTTCTTCTTCTTCTTTTTCTTTTTGCAAAATTTTTCTAGTAATGTCTTTGTGCAAAGGGTCTTGCATTGAAGCACTTTAGATGCAAATTTTGCTAATATATATAATTTATTTATAAAAAAAAAGTCAAATATATATCTTCTCCAAATTTAAAAAGTAATTTGATT ATGCCAGAACCAAACACCTCAAATAATCCAAGGAAGCCGTGGTATCAAAGAGCAATGGAAATAGTGGGAACTCAATGGAAAACAACAAGTTCAAAAGCAAGAGAAATCACAATTGCAACAGCAAATGGGGCATTCAATTCCAAGGCAAATAATGGGAATAACAACAACAATAGTAGCAAGTACAACAAAATGAGAAAATGCACTTCTCTAAAGATAGCAACTTCATTCACAAGAGTATGTCTTTGTGCACCAATCTCTTCTTACAATGAAATTTTTCAACAAGCTGAAATTCCACCGAGAAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAACAATAATAATAACAATGGCAATAATACTACTAATCATATTATCACACATGAAAGAGTACTTCTTCCAAGTGCAAGACTTAGCGGCGAAAGTAGTCGACGGTTTTTTCGAGGAAAGTCTCTCACGGACGACGTTTTGATGCGGAGGTTCGTGGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTAATAAGGAAAAGGAATTTGATGAGGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTAATAGCTGAGGAAGAACAATGCCATACATTTAATATATAA ATGCCAGAACCAAACACCTCAAATAATCCAAGGAAGCCGTGGTATCAAAGAGCAATGGAAATAGTGGGAACTCAATGGAAAACAACAAGTTCAAAAGCAAGAGAAATCACAATTGCAACAGCAAATGGGGCATTCAATTCCAAGGCAAATAATGGGAATAACAACAACAATAGTAGCAAGTACAACAAAATGAGAAAATGCACTTCTCTAAAGATAGCAACTTCATTCACAAGAGTATGTCTTTGTGCACCAATCTCTTCTTACAATGAAATTTTTCAACAAGCTGAAATTCCACCGAGAAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAACAATAATAATAACAATGGCAATAATACTACTAATCATATTATCACACATGAAAGAGTACTTCTTCCAAGTGCAAGACTTAGCGGCGAAAGTAGTCGACGGTTTTTTCGAGGAAAGTCTCTCACGGACGACGTTTTGATGCGGAGGTTCGTGGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTAATAAGGAAAAGGAATTTGATGAGGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTAATAGCTGAGGAAGAACAATGCCATACATTTAATATATAA MPEPNTSNNPRKPWYQRAMEIVGTQWKTTSSKAREITIATANGAFNSKANNGNNNNNSSKYNKMRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNNNNNNGNNTTNHIITHERVLLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRRKKLGPSPLSKMVIAEEEQCHTFNI
BLAST of CsaV3_6G007050.1 vs. NCBI nr
Match: XP_004140595.1 (PREDICTED: probable myosin light chain kinase DDB_G0279831 isoform X2 [Cucumis sativus]) HSP 1 Score: 215.7 bits (548), Expect = 1.5e-52 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of CsaV3_6G007050.1 vs. NCBI nr
Match: XP_011656743.1 (PREDICTED: probable myosin light chain kinase DDB_G0279831 isoform X1 [Cucumis sativus]) HSP 1 Score: 211.1 bits (536), Expect = 3.8e-51 Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0
BLAST of CsaV3_6G007050.1 vs. NCBI nr
Match: KGN46339.1 (hypothetical protein Csa_6G087190 [Cucumis sativus]) HSP 1 Score: 194.1 bits (492), Expect = 4.8e-46 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of CsaV3_6G007050.1 vs. NCBI nr
Match: XP_008460011.1 (PREDICTED: serine/threonine-protein kinase pakD isoform X2 [Cucumis melo]) HSP 1 Score: 177.9 bits (450), Expect = 3.6e-41 Identity = 102/113 (90.27%), Postives = 103/113 (91.15%), Query Frame = 0
BLAST of CsaV3_6G007050.1 vs. NCBI nr
Match: XP_008460010.1 (PREDICTED: serine/threonine-protein kinase pakD isoform X1 [Cucumis melo]) HSP 1 Score: 173.3 bits (438), Expect = 8.8e-40 Identity = 102/114 (89.47%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of CsaV3_6G007050.1 vs. TAIR10
Match: AT3G59680.2 (unknown protein) HSP 1 Score: 82.8 bits (203), Expect = 2.8e-16 Identity = 50/109 (45.87%), Postives = 65/109 (59.63%), Query Frame = 0
BLAST of CsaV3_6G007050.1 vs. TrEMBL
Match: tr|A0A0A0KBW5|A0A0A0KBW5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087190 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 3.2e-46 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of CsaV3_6G007050.1 vs. TrEMBL
Match: tr|A0A1S3CBJ3|A0A1S3CBJ3_CUCME (serine/threonine-protein kinase pakD isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498954 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.4e-41 Identity = 102/113 (90.27%), Postives = 103/113 (91.15%), Query Frame = 0
BLAST of CsaV3_6G007050.1 vs. TrEMBL
Match: tr|A0A1S3CBM1|A0A1S3CBM1_CUCME (serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498954 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 5.8e-40 Identity = 102/114 (89.47%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of CsaV3_6G007050.1 vs. TrEMBL
Match: tr|A0A2I4H860|A0A2I4H860_9ROSI (uncharacterized protein LOC109014358 OS=Juglans regia OX=51240 GN=LOC109014358 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 2.1e-21 Identity = 65/118 (55.08%), Postives = 79/118 (66.95%), Query Frame = 0
BLAST of CsaV3_6G007050.1 vs. TrEMBL
Match: tr|A0A251TJX1|A0A251TJX1_HELAN (Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr10g0285991 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 6.1e-21 Identity = 60/108 (55.56%), Postives = 71/108 (65.74%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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