CsaV3_5G040130.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G040130.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	F-box/LRR-repeat protein At3g26922-like isoform X1
Location	chr5 : 31622183 .. 31623384 (+)
Sequence length	1104

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGATCAGGAAAAGTACACAAACTGAAGAAGACAGAATCAGCCTTCTCCCAGATTGCCTTCTTCATGAAATCCTCTCTTTTCTAAACACAAAATCCGTAGTCCAAACTTGTGTTCTATCTAAACGATGGAAAACCCTTTGGACTGAAATCCCCACTCTCAACTTTGATTACAATAGTTCTTACTCATTTTCGATCTTCAAAACCGAAGAAGATGATATATCCAAACAAACATCCTTCAAAAACTTCATCATTCGAGTTTTATCGAAACTCCGTACCAAAAGCATTCGAAAACTAGCCTACACTTCTTCCAAAAACCGTTATGATTTGACCATTTTAGCTGACTTTTTGATAAGCTATGCTAGATCCCACAGTGTTCAACAACTTTTCCTCAATACTTTCAATGTTATTGAATCCCATTTTTGGGATTTTTGTATTAACGTGAACACATGTTCATCACTCGTTCATCTGAAATTGGTATGTGTGTTTGCGGATAATTTGGATGTTTTGGCTTTACCCTCACTGAAAATATTAGAGATTGAATCTCTTTGGTTGGAACGACCTGATAAGAGGGCAAATCACAAAGAAATTACAATGTTTCCTGGTTGCCCAAATTTGGAATCTTTGGTTTTCTTTGTTCATCTTTTCCAGACTGCAACTATTTCTGCTCCTAAACTTAAGAATTTGAAACTATGTGCTTCTCCCGACAATGATCCAACTTTTTCCGAAGTTCAATTGCTTACACCAACCCTAGAAAATATCAGTTTCGTCAATGTGTTGCCTACTGTCAAGTCTGATTATGAATTTTCTCGCATAGATAAAGTAGATATACAACTTGTCTCTAGATTTGAAAGGGATGACCGAAACTCACGAAAATCAAAGTTTAGAGAGTTGCTTAGTGTGTTTCATATGGCAAGGTCATTCACACTGCCTTTAAAGCTCACAATGCAGGTACGTACTATATGTTCTATAATAATATTAACTTTGCTTTCACTCATTGTATATGAGTCGACATTTTCTTATCTAATTTGAATTTGTTTGTTTACAAGGTGATGTCGTTGGATAATTTTGATGCATTATGTTTTCATAATATGAAGCATTTGAGGTTGAGAACCAAGGAGACTGGGTTACTATTAGAGCAATTACTTAAAGCCCCCAATTTAGAGAACTTTCGTTTTGTCAAAGAGGTAAGGATCAATTAA

mRNA sequence

ATGACGATCAGGAAAAGTACACAAACTGAAGAAGACAGAATCAGCCTTCTCCCAGATTGCCTTCTTCATGAAATCCTCTCTTTTCTAAACACAAAATCCGTAGTCCAAACTTGTGTTCTATCTAAACGATGGAAAACCCTTTGGACTGAAATCCCCACTCTCAACTTTGATTACAATAGTTCTTACTCATTTTCGATCTTCAAAACCGAAGAAGATGATATATCCAAACAAACATCCTTCAAAAACTTCATCATTCGAGTTTTATCGAAACTCCGTACCAAAAGCATTCGAAAACTAGCCTACACTTCTTCCAAAAACCGTTATGATTTGACCATTTTAGCTGACTTTTTGATAAGCTATGCTAGATCCCACAGTGTTCAACAACTTTTCCTCAATACTTTCAATGTTATTGAATCCCATTTTTGGGATTTTTGTATTAACGTGAACACATGTTCATCACTCGTTCATCTGAAATTGGTATGTGTGTTTGCGGATAATTTGGATGTTTTGGCTTTACCCTCACTGAAAATATTAGAGATTGAATCTCTTTGGTTGGAACGACCTGATAAGAGGGCAAATCACAAAGAAATTACAATGTTTCCTGGTTGCCCAAATTTGGAATCTTTGGTTTTCTTTGTTCATCTTTTCCAGACTGCAACTATTTCTGCTCCTAAACTTAAGAATTTGAAACTATGTGCTTCTCCCGACAATGATCCAACTTTTTCCGAAGTTCAATTGCTTACACCAACCCTAGAAAATATCAGTTTCGTCAATGTGTTGCCTACTGTCAAGTCTGATTATGAATTTTCTCGCATAGATAAAGTAGATATACAACTTGTCTCTAGATTTGAAAGGGATGACCGAAACTCACGAAAATCAAAGTTTAGAGAGTTGCTTAGTGTGTTTCATATGGCAAGGTCATTCACACTGCCTTTAAAGCTCACAATGCAGGTGATGTCGTTGGATAATTTTGATGCATTATGTTTTCATAATATGAAGCATTTGAGGTTGAGAACCAAGGAGACTGGGTTACTATTAGAGCAATTACTTAAAGCCCCCAATTTAGAGAACTTTCGTTTTGTCAAAGAGGTAAGGATCAATTAA

Coding sequence (CDS)

ATGACGATCAGGAAAAGTACACAAACTGAAGAAGACAGAATCAGCCTTCTCCCAGATTGCCTTCTTCATGAAATCCTCTCTTTTCTAAACACAAAATCCGTAGTCCAAACTTGTGTTCTATCTAAACGATGGAAAACCCTTTGGACTGAAATCCCCACTCTCAACTTTGATTACAATAGTTCTTACTCATTTTCGATCTTCAAAACCGAAGAAGATGATATATCCAAACAAACATCCTTCAAAAACTTCATCATTCGAGTTTTATCGAAACTCCGTACCAAAAGCATTCGAAAACTAGCCTACACTTCTTCCAAAAACCGTTATGATTTGACCATTTTAGCTGACTTTTTGATAAGCTATGCTAGATCCCACAGTGTTCAACAACTTTTCCTCAATACTTTCAATGTTATTGAATCCCATTTTTGGGATTTTTGTATTAACGTGAACACATGTTCATCACTCGTTCATCTGAAATTGGTATGTGTGTTTGCGGATAATTTGGATGTTTTGGCTTTACCCTCACTGAAAATATTAGAGATTGAATCTCTTTGGTTGGAACGACCTGATAAGAGGGCAAATCACAAAGAAATTACAATGTTTCCTGGTTGCCCAAATTTGGAATCTTTGGTTTTCTTTGTTCATCTTTTCCAGACTGCAACTATTTCTGCTCCTAAACTTAAGAATTTGAAACTATGTGCTTCTCCCGACAATGATCCAACTTTTTCCGAAGTTCAATTGCTTACACCAACCCTAGAAAATATCAGTTTCGTCAATGTGTTGCCTACTGTCAAGTCTGATTATGAATTTTCTCGCATAGATAAAGTAGATATACAACTTGTCTCTAGATTTGAAAGGGATGACCGAAACTCACGAAAATCAAAGTTTAGAGAGTTGCTTAGTGTGTTTCATATGGCAAGGTCATTCACACTGCCTTTAAAGCTCACAATGCAGGTGATGTCGTTGGATAATTTTGATGCATTATGTTTTCATAATATGAAGCATTTGAGGTTGAGAACCAAGGAGACTGGGTTACTATTAGAGCAATTACTTAAAGCCCCCAATTTAGAGAACTTTCGTTTTGTCAAAGAGGTAAGGATCAATTAA

Protein sequence

MTIRKSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSFSIFKTEEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSHSVQQLFLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEIESLWLERPDKRANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPTFSEVQLLTPTLENISFVNVLPTVKSDYEFSRIDKVDIQLVSRFERDDRNSRKSKFRELLSVFHMARSFTLPLKLTMQVMSLDNFDALCFHNMKHLRLRTKETGLLLEQLLKAPNLENFRFVKEVRIN

Homology

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BLAST of CsaV3_5G040130.1 vs. NCBI nr
Match: KGN52678.1 (hypothetical protein Csa_5G650430 [Cucumis sativus])

HSP 1 Score: 717.2 bits (1850), Expect = 2.8e-203
Identity = 364/367 (99.18%), Postives = 365/367 (99.46%), Query Frame = 0


Query: 1   MTIRKSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNS 60
           MTIRKSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNS
Sbjct: 1   MTIRKSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNS 60

Query: 61  SYSFSIFKTEEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISY 120
           SYSFSIFKTEEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISY
Sbjct: 61  SYSFSIFKTEEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISY 120

Query: 121 ARSHSVQQLFLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEI 180
           ARSHSVQQLFLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEI
Sbjct: 121 ARSHSVQQLFLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEI 180

Query: 181 ESLWLERPDKRANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPT 240
           ESLWLERPDKRANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPT
Sbjct: 181 ESLWLERPDKRANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPT 240

Query: 241 FSEVQLLTPTLENISFVNVLPTVKSDYEFSRIDKVDIQLVSRFERDDRNSRKSKFRELLS 300
           FSEVQLLTPTLENISFVNVLPTVKSDYEFSRIDKVDIQLVSRFERDDRNSRKSKFRELLS
Sbjct: 241 FSEVQLLTPTLENISFVNVLPTVKSDYEFSRIDKVDIQLVSRFERDDRNSRKSKFRELLS 300

Query: 301 VFHMARSFTLPLKLTMQVMSLDNFDALCFHNMKHLRLRTKETGLLLEQLLKAPNLENFRF 360
           VFHMARSFTLPLKLTMQVMSLDNFDALCFHNMKHLRLRTKETGLLLEQLLKAPNLENFRF
Sbjct: 301 VFHMARSFTLPLKLTMQVMSLDNFDALCFHNMKHLRLRTKETGLLLEQLLKAPNLENFRF 360

Query: 361 VKEVRIN 368
           VKE  +N
Sbjct: 361 VKEANVN 367

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BLAST of CsaV3_5G040130.1 vs. NCBI nr
Match: XP_004141639.1 (PREDICTED: F-box/LRR-repeat protein At3g26922-like [Cucumis sativus])

HSP 1 Score: 713.4 bits (1840), Expect = 4.0e-202
Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0


Query: 1   MTIRKSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNS 60
           MTIRKSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNS
Sbjct: 1   MTIRKSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNS 60

Query: 61  SYSFSIFKTEEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISY 120
           SYSFSIFKTEEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISY
Sbjct: 61  SYSFSIFKTEEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISY 120

Query: 121 ARSHSVQQLFLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEI 180
           ARSHSVQQLFLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEI
Sbjct: 121 ARSHSVQQLFLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEI 180

Query: 181 ESLWLERPDKRANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPT 240
           ESLWLERPDKRANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPT
Sbjct: 181 ESLWLERPDKRANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPT 240

Query: 241 FSEVQLLTPTLENISFVNVLPTVKSDYEFSRIDKVDIQLVSRFERDDRNSRKSKFRELLS 300
           FSEVQLLTPTLENISFVNVLPTVKSDYEFSRIDKVDIQLVSRFERDDRNSRKSKFRELLS
Sbjct: 241 FSEVQLLTPTLENISFVNVLPTVKSDYEFSRIDKVDIQLVSRFERDDRNSRKSKFRELLS 300

Query: 301 VFHMARSFTLPLKLTMQVMSLDNFDALCFHNMKHLRLRTKETGLLLEQLLKAPNLENFRF 360
           VFHMARSFTLPLKLTMQVMSLDNFDALCFHNMKHLRLRTKETGLLLEQLLKAPNLENFRF
Sbjct: 301 VFHMARSFTLPLKLTMQVMSLDNFDALCFHNMKHLRLRTKETGLLLEQLLKAPNLENFRF 360

Query: 361 VKE 364
           VKE
Sbjct: 361 VKE 363

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BLAST of CsaV3_5G040130.1 vs. NCBI nr
Match: XP_008459617.1 (PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo])

HSP 1 Score: 365.9 bits (938), Expect = 1.6e-97
Identity = 215/357 (60.22%), Postives = 263/357 (73.67%), Query Frame = 0


Query: 10  EEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSFSIFKT 69
           E+DRISLLPD LLH ILS  NTK VVQTC+LSKRWKTLWT IPTLNFDYNS  S S F  
Sbjct: 15  EDDRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSSFNY 74

Query: 70  EEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSHSVQQL 129
           ++++ SK+ SFK FI RVLSK     I+KL YTSS N  D ++L + LI YA SH+VQQL
Sbjct: 75  DDEE-SKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNG-DESVLVELLICYAGSHNVQQL 134

Query: 130 FLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEIESLWLERPD 189
            +NT+N I  + WD+C  +  CSSL+ LK+VC F D+  VLALPSLKILEI+  W  R D
Sbjct: 135 CVNTYN-IGIYEWDYCFPI--CSSLIELKMVCGFVDDWGVLALPSLKILEIQCDWSAR-D 194

Query: 190 KRANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPTFSEVQLLTP 249
           +RAN+  ITMF GCPNLESLV   +LF++ATISAP+L+N KLCAS D + TF +V+LLTP
Sbjct: 195 ERANYDGITMFSGCPNLESLVLVDYLFESATISAPRLENFKLCASHDMELTFPQVELLTP 254

Query: 250 TLENISFVNVLPTVKSDYEFSRIDKVDIQLV-SRFERDDRNSR--KSKFRELLSVFHMAR 309
           TL+ ++FVNVLP ++SD EFS I KVDIQL  S F  D   ++  KSKF +LLSV H A 
Sbjct: 255 TLKAVNFVNVLPVLESDSEFSCIQKVDIQLKDSVFTTDGSQTQELKSKFIDLLSVLHNAS 314

Query: 310 SFTLPLKLTMQVMSLDNFDALCFHNMKHLRLRTKETGLLLEQLLKAPNLENFRFVKE 364
           SFTLP+K T QV+S  ++  L FHNM+HLRL+TKE+ LLL+ LLKAP LE    + E
Sbjct: 315 SFTLPMKAT-QVIS--SYKELSFHNMRHLRLKTKESDLLLKHLLKAPKLETIVVLNE 362

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BLAST of CsaV3_5G040130.1 vs. NCBI nr
Match: XP_008459618.1 (PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X2 [Cucumis melo])

HSP 1 Score: 314.3 bits (804), Expect = 5.5e-82
Identity = 196/357 (54.90%), Postives = 238/357 (66.67%), Query Frame = 0


Query: 10  EEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSFSIFKT 69
           E+DRISLLPD LLH ILS  NTK VVQTC+LSKRWKTLWT IPTLNFDYNS  S S F  
Sbjct: 15  EDDRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSSFNY 74

Query: 70  EEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSHSVQQL 129
           ++++ SK+ SFK FI RVLSK     I+KL YTSS N  D ++L + LI YA SH+VQQL
Sbjct: 75  DDEE-SKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNG-DESVLVELLICYAGSHNVQQL 134

Query: 130 FLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEIESLWLERPD 189
            +NT+N I  + WD+C  +  CSSL+ LK+VC F D+  VLALPSLKILEI+  W  R D
Sbjct: 135 CVNTYN-IGIYEWDYCFPI--CSSLIELKMVCGFVDDWGVLALPSLKILEIQCDWSAR-D 194

Query: 190 KRANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPTFSEVQLLTP 249
           +RAN+  ITMF GCPNLESLV   +LF++ATISAP+L+N KLCAS D + TF +      
Sbjct: 195 ERANYDGITMFSGCPNLESLVLVDYLFESATISAPRLENFKLCASHDMELTFPQ------ 254

Query: 250 TLENISFVNVLPTVKSDYEFSRIDKVDIQLV-SRFERDDRNSR--KSKFRELLSVFHMAR 309
                                   KVDIQL  S F  D   ++  KSKF +LLSV H A 
Sbjct: 255 ------------------------KVDIQLKDSVFTTDGSQTQELKSKFIDLLSVLHNAS 314

Query: 310 SFTLPLKLTMQVMSLDNFDALCFHNMKHLRLRTKETGLLLEQLLKAPNLENFRFVKE 364
           SFTLP+K T QV+S  ++  L FHNM+HLRL+TKE+ LLL+ LLKAP LE    + E
Sbjct: 315 SFTLPMKAT-QVIS--SYKELSFHNMRHLRLKTKESDLLLKHLLKAPKLETIVVLNE 332

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BLAST of CsaV3_5G040130.1 vs. NCBI nr
Match: XP_022141791.1 (LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like [Momordica charantia])

HSP 1 Score: 262.7 bits (670), Expect = 1.9e-66
Identity = 166/317 (52.37%), Postives = 213/317 (67.19%), Query Frame = 0


Query: 11  EDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSFSIFKTE 70
           EDRISLLPDCLL  ILS +NTK VVQTCVLSKRWKTLWT IPTLNF++  SY F     E
Sbjct: 117 EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNF-KSYPF-----E 176

Query: 71  EDDI----SKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSHSV 130
           E  +    SKQ+SFKNFI R+LS+     I+KL+YTSS N  D  +L + LI +AR H+V
Sbjct: 177 EPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNE-DEVVLVELLICFARRHNV 236

Query: 131 QQLFLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEIESLWLE 190
           ++L+L+T+  I  + W +C+  + CSSL  LK+VC F  +  VL LPSL+ILEIE    E
Sbjct: 237 RELYLDTY-YISVYDWKYCL--SACSSLTVLKMVCGFVADWGVLTLPSLRILEIE---XE 296

Query: 191 RPDKRANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPTFSEVQL 250
             +  A++K I MF GCPNL+SLV   +LF++ATI APKL+NL LC+   N+  FSEV+L
Sbjct: 297 DCEDDADYKGIRMFSGCPNLKSLVLINYLFESATICAPKLENLVLCSG--NELVFSEVEL 356

Query: 251 -LTPTLENISFVNVLPTVKSDYEFSRIDKVDIQLVSRFERDDRN-----SRKSKFRELLS 310
             T +L N++F N+LPTV S  EFS I KV+I+ V  ++    N     ++ + F EL  
Sbjct: 357 TCTSSLRNVTFSNMLPTVNSALEFSCIQKVNIE-VHNYQFSSGNGYFCQNKIAAFSELFR 416

Query: 311 VFHMARSFTLPLKLTMQ 318
           VFH ARSF LPL  T Q
Sbjct: 417 VFHNARSFILPLTPTQQ 417

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BLAST of CsaV3_5G040130.1 vs. TAIR10
Match: AT2G26030.1 (F-box/RNI-like/FBD-like domains-containing protein)

HSP 1 Score: 85.5 bits (210), Expect = 7.5e-17
Identity = 103/370 (27.84%), Postives = 163/370 (44.05%), Query Frame = 0


Query: 12  DRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSFSIFKTEE 71
           DRI  LPD LL ++LS+L T   V+T VLSKRW+ LW  +P L+         S F  E 
Sbjct: 4   DRICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDL------KVSDFPDE- 63

Query: 72  DDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSHSVQQLFL 131
                  ++ +FI   L   R   +RK      +  YD   LA ++++      +Q L  
Sbjct: 64  -------NYASFIDNFLEFNRKSRMRKFKLKYDEYTYDDDRLAGWVVTTV-DRGIQHLDA 123

Query: 132 NTFNVIESHFWDFCI------NVNTCSSLVHLKLVCVFADNLD-VLALPSLKILEIESLW 191
             F        + C+      N+  C++LV L LV V  +N + V++LPSLKI+ +E +W
Sbjct: 124 KGFET------NMCVREFMPQNIYKCNTLVSLMLVTVGIENPEFVVSLPSLKIMHLEDVW 183

Query: 192 LERPDKRANHKEITMFPGCPNLESLVFF-------VHLFQTATISAPKLKNLKLCASPDN 251
               D     K I+   GCP LE  V         + + Q   + +  L++ +L      
Sbjct: 184 Y-YDDPLIMEKIIS---GCPVLEDFVLIRPIDFCNLDVLQFLRVRSLSLRSFRLTFEYSV 243

Query: 252 DPTFSEVQLLTPTLENISF---VNVLPTVKSDYEFSRIDKVDIQLVSRFERDDRNSRKSK 311
             T+  V++  P LE ++F    +    VK+    S ID +D +   +F          +
Sbjct: 244 SCTYFSVEIDAPRLEYLNFNDDQSDTIVVKNMTSLSMID-IDSEFNVKFGGSRLEPGDLR 303

Query: 312 FRELLSVFHMARSFTLPLKLTMQVMS-LDNFDALC----FHNMKHLRLRTKET--GLLLE 358
            R+++  F  A S    + ++ + +  LD +  L     F N+  L+     +   LLL 
Sbjct: 304 KRDIIRDFLTAISCVRHMIISRRTLEVLDRYSKLVPIPKFDNLYRLQAAVSRSMLQLLLV 347

[Close]

BLAST of CsaV3_5G040130.1 vs. TAIR10
Match: AT2G04230.1 (FBD, F-box and Leucine Rich Repeat domains containing protein)

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-16
Identity = 75/232 (32.33%), Postives = 116/232 (50.00%), Query Frame = 0


Query: 5   KSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSF 64
           K+    EDRIS LPD LL +ILS L T++ + T VLSKRW++LWT +P L FD N +  F
Sbjct: 6   KTDSMNEDRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSNFNPVF 65

Query: 65  SIFKTEEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSH 124
                 +DD    T F   + + LS L    + +  + S + R D  +     I+ A + 
Sbjct: 66  ------DDDNIDPTMFSENVYKTLS-LHKAPVLESLHLSFEGRTD-CLHVGIWIATAFAR 125

Query: 125 SVQQLFLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEIESLW 184
            V++L L++F   +       +  +   SL  LKL C  A +LD  +   LK   +  L+
Sbjct: 126 GVRKLVLDSFYQEDQTVTLPSVLFSYNDSLEILKLKC--AIDLDFPSRVCLK--SLRKLY 185

Query: 185 LERPDKRANHKEITMFPGCPNLESLVFFVHLFQTA-----TISAPKLKNLKL 232
           L++   +       +  GCP+L+ LV  VH +  A     TI++P L+ L +
Sbjct: 186 LDQVHFKDEESVCNLLCGCPSLQDLV--VHRYSNADVATFTIASPSLQRLTI 223

[Close]

BLAST of CsaV3_5G040130.1 vs. TAIR10
Match: AT3G26922.1 (F-box/RNI-like superfamily protein)

HSP 1 Score: 80.9 bits (198), Expect = 1.8e-15
Identity = 73/240 (30.42%), Postives = 112/240 (46.67%), Query Frame = 0


Query: 3   IRKSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSY 62
           +R      EDRIS LP+ LL +ILS L  K VV T VLSK W++LW  +PTL FDY    
Sbjct: 5   LRNGNGVNEDRISDLPEALLLQILSMLPVKDVVTTSVLSKPWRSLWKLVPTLKFDY---- 64

Query: 63  SFSIFKTEEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYAR 122
                   E++ S+  ++   + R+L   +   +  L +   +     ++     I  A 
Sbjct: 65  --------ENNQSEDETYSEIVCRLLLSNKAPFLESL-HLGFRFGECRSVEVGMWIGIAY 124

Query: 123 SHSVQQLFLNTFNVIESHFWDFCINVNTCSSLVHLKL-VCVFADNLDVLALPSLKILEIE 182
           +  V+ L L+  +V  S    F   +  C +L  L L   V  D      L SL+ L +E
Sbjct: 125 ARHVRDLVLHVESVKGSFI--FPTGLYNCETLESLTLRSWVLVDVPSPACLKSLRTLRLE 184

Query: 183 SLWLERPDKRANHKEITMFPGCPNLESLVFF---VHLFQTATISAPKLKNLKLCASPDND 239
           ++     D + +     +  GCPNLE+LV +   +   +T TI+ P L+ L +    DND
Sbjct: 185 NV-----DYKYDDSVYNLLSGCPNLENLVVYRGNLLEVETFTIAVPSLQRLTI--YDDND 222

[Close]

BLAST of CsaV3_5G040130.1 vs. TAIR10
Match: AT5G53640.1 (F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat 2 (InterPro:IPR013101))

HSP 1 Score: 80.9 bits (198), Expect = 1.8e-15
Identity = 81/263 (30.80%), Postives = 119/263 (45.25%), Query Frame = 0


Query: 10  EEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSFSIFKT 69
           +EDRIS   + LL +IL++L TK VV+T VLS RW++LW  +P+L  D   S  FS F T
Sbjct: 20  KEDRISQFYESLLCQILNYLPTKDVVKTSVLSTRWRSLWLLVPSLELD---SRDFSDFNT 79

Query: 70  EEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSHSVQQL 129
                     F +F  R     R   I KL  T S+N  D   L  + I  A    +Q L
Sbjct: 80  ----------FVSFCDRYFDSNRVLCINKLKLTISENEEDGFYLKSW-IDAAAKRKIQHL 139

Query: 130 ---FLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEIESLWLE 189
              FL  F+ I  HF     N+  C +LV L+L  V  D   + + P +K + +E     
Sbjct: 140 DVQFLPQFHKI--HF-----NLYKCEALVSLRLFEVSLDKGRIFSFPCMKTMHLED---N 199

Query: 190 RPDKRANHKEITMFPGCPNLESLVFFVH-----------LFQTATISAPKLKNLKLCASP 249
                A  KE  +   CP LE L   ++            +    +S P +K + L  + 
Sbjct: 200 VYPNEATFKE--LISCCPVLEDLTVIIYGMDRKVFQIEGRYDAKFVSFPCMKTMHLEDNM 256

Query: 250 -DNDPTFSEVQLLTPTLENISFV 258
             N+ TF ++    P LE+++ +
Sbjct: 260 YPNESTFKKLISCCPVLEDLTVI 256

[Close]

BLAST of CsaV3_5G040130.1 vs. TAIR10
Match: AT1G16930.1 (F-box/RNI-like/FBD-like domains-containing protein)

HSP 1 Score: 79.7 bits (195), Expect = 4.1e-15
Identity = 73/291 (25.09%), Postives = 131/291 (45.02%), Query Frame = 0


Query: 5   KSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSF 64
           K  Q   DRIS LPD LL +ILS L+TK  V T VLSKRW+ LW  +P L+ D N+    
Sbjct: 8   KEKQRNSDRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLDSNN---- 67

Query: 65  SIFKTEEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSH 124
                 +DD+     F +F+ R L     + + +       N +D +    ++ +  +  
Sbjct: 68  ----FPDDDV-----FVSFVNRFLGSENEQHLERFKLIYEVNEHDASRFKSWINAVIKR- 127

Query: 125 SVQQLFLNTFNVI--ESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEIES 184
             +    N  N +  +       +++ +C  LV+L+L  V  D+ + ++LP +KI+ ++ 
Sbjct: 128 --RVCHFNVHNEVDDDDELVKMPLSLYSCERLVNLQLYRVALDHPESVSLPCVKIMHLDM 187

Query: 185 LWLERPDKRANHKEITMFPGCPNLESLVFF---VHLFQTATISAPKLKNLKLCASPDNDP 244
           +  +     A+     +  GCP LE L          +   + +  LK+ K+    D++ 
Sbjct: 188 VKYD-----ADSTLEILISGCPVLEELTIVRDPNDSLEVVCVRSQSLKSFKI----DSER 247

Query: 245 TFSEVQLLTPTLENISFVNVLPTVKSDYEFSRID---KVDIQLVSRFERDD 288
             S+  ++T     + ++N+       +    I    KVDI ++   E +D
Sbjct: 248 YESQNHVVTIDAPRLEYMNLCDHRSDSFIIHNIGPFAKVDIDVIFNVEYND 273

[Close]

BLAST of CsaV3_5G040130.1 vs. Swiss-Prot
Match: sp|Q8H1M0|FDL16_ARATH (F-box/FBD/LRR-repeat protein At2g26030 OS=Arabidopsis thaliana OX=3702 GN=At2g26030 PE=2 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 1.3e-15
Identity = 103/370 (27.84%), Postives = 163/370 (44.05%), Query Frame = 0


Query: 12  DRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSFSIFKTEE 71
           DRI  LPD LL ++LS+L T   V+T VLSKRW+ LW  +P L+         S F  E 
Sbjct: 4   DRICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDL------KVSDFPDE- 63

Query: 72  DDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSHSVQQLFL 131
                  ++ +FI   L   R   +RK      +  YD   LA ++++      +Q L  
Sbjct: 64  -------NYASFIDNFLEFNRKSRMRKFKLKYDEYTYDDDRLAGWVVTTV-DRGIQHLDA 123

Query: 132 NTFNVIESHFWDFCI------NVNTCSSLVHLKLVCVFADNLD-VLALPSLKILEIESLW 191
             F        + C+      N+  C++LV L LV V  +N + V++LPSLKI+ +E +W
Sbjct: 124 KGFET------NMCVREFMPQNIYKCNTLVSLMLVTVGIENPEFVVSLPSLKIMHLEDVW 183

Query: 192 LERPDKRANHKEITMFPGCPNLESLVFF-------VHLFQTATISAPKLKNLKLCASPDN 251
               D     K I+   GCP LE  V         + + Q   + +  L++ +L      
Sbjct: 184 Y-YDDPLIMEKIIS---GCPVLEDFVLIRPIDFCNLDVLQFLRVRSLSLRSFRLTFEYSV 243

Query: 252 DPTFSEVQLLTPTLENISF---VNVLPTVKSDYEFSRIDKVDIQLVSRFERDDRNSRKSK 311
             T+  V++  P LE ++F    +    VK+    S ID +D +   +F          +
Sbjct: 244 SCTYFSVEIDAPRLEYLNFNDDQSDTIVVKNMTSLSMID-IDSEFNVKFGGSRLEPGDLR 303

Query: 312 FRELLSVFHMARSFTLPLKLTMQVMS-LDNFDALC----FHNMKHLRLRTKET--GLLLE 358
            R+++  F  A S    + ++ + +  LD +  L     F N+  L+     +   LLL 
Sbjct: 304 KRDIIRDFLTAISCVRHMIISRRTLEVLDRYSKLVPIPKFDNLYRLQAAVSRSMLQLLLV 347

[Close]

BLAST of CsaV3_5G040130.1 vs. Swiss-Prot
Match: sp|Q6NKX3|FDL14_ARATH (F-box/FBD/LRR-repeat protein At2g04230 OS=Arabidopsis thaliana OX=3702 GN=At2g04230 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.3e-15
Identity = 75/232 (32.33%), Postives = 116/232 (50.00%), Query Frame = 0


Query: 5   KSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSF 64
           K+    EDRIS LPD LL +ILS L T++ + T VLSKRW++LWT +P L FD N +  F
Sbjct: 6   KTDSMNEDRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSNFNPVF 65

Query: 65  SIFKTEEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSH 124
                 +DD    T F   + + LS L    + +  + S + R D  +     I+ A + 
Sbjct: 66  ------DDDNIDPTMFSENVYKTLS-LHKAPVLESLHLSFEGRTD-CLHVGIWIATAFAR 125

Query: 125 SVQQLFLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEIESLW 184
            V++L L++F   +       +  +   SL  LKL C  A +LD  +   LK   +  L+
Sbjct: 126 GVRKLVLDSFYQEDQTVTLPSVLFSYNDSLEILKLKC--AIDLDFPSRVCLK--SLRKLY 185

Query: 185 LERPDKRANHKEITMFPGCPNLESLVFFVHLFQTA-----TISAPKLKNLKL 232
           L++   +       +  GCP+L+ LV  VH +  A     TI++P L+ L +
Sbjct: 186 LDQVHFKDEESVCNLLCGCPSLQDLV--VHRYSNADVATFTIASPSLQRLTI 223

[Close]

BLAST of CsaV3_5G040130.1 vs. Swiss-Prot
Match: sp|Q9LJF8|FBL47_ARATH (F-box/LRR-repeat protein At3g26922 OS=Arabidopsis thaliana OX=3702 GN=At3g26922 PE=2 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 3.3e-14
Identity = 73/240 (30.42%), Postives = 112/240 (46.67%), Query Frame = 0


Query: 3   IRKSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSY 62
           +R      EDRIS LP+ LL +ILS L  K VV T VLSK W++LW  +PTL FDY    
Sbjct: 5   LRNGNGVNEDRISDLPEALLLQILSMLPVKDVVTTSVLSKPWRSLWKLVPTLKFDY---- 64

Query: 63  SFSIFKTEEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYAR 122
                   E++ S+  ++   + R+L   +   +  L +   +     ++     I  A 
Sbjct: 65  --------ENNQSEDETYSEIVCRLLLSNKAPFLESL-HLGFRFGECRSVEVGMWIGIAY 124

Query: 123 SHSVQQLFLNTFNVIESHFWDFCINVNTCSSLVHLKL-VCVFADNLDVLALPSLKILEIE 182
           +  V+ L L+  +V  S    F   +  C +L  L L   V  D      L SL+ L +E
Sbjct: 125 ARHVRDLVLHVESVKGSFI--FPTGLYNCETLESLTLRSWVLVDVPSPACLKSLRTLRLE 184

Query: 183 SLWLERPDKRANHKEITMFPGCPNLESLVFF---VHLFQTATISAPKLKNLKLCASPDND 239
           ++     D + +     +  GCPNLE+LV +   +   +T TI+ P L+ L +    DND
Sbjct: 185 NV-----DYKYDDSVYNLLSGCPNLENLVVYRGNLLEVETFTIAVPSLQRLTI--YDDND 222

[Close]

BLAST of CsaV3_5G040130.1 vs. Swiss-Prot
Match: sp|Q9FZ52|FDL3_ARATH (F-box/FBD/LRR-repeat protein At1g16930 OS=Arabidopsis thaliana OX=3702 GN=At1g16930 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 7.4e-14
Identity = 73/291 (25.09%), Postives = 131/291 (45.02%), Query Frame = 0


Query: 5   KSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSF 64
           K  Q   DRIS LPD LL +ILS L+TK  V T VLSKRW+ LW  +P L+ D N+    
Sbjct: 8   KEKQRNSDRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLDSNN---- 67

Query: 65  SIFKTEEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSH 124
                 +DD+     F +F+ R L     + + +       N +D +    ++ +  +  
Sbjct: 68  ----FPDDDV-----FVSFVNRFLGSENEQHLERFKLIYEVNEHDASRFKSWINAVIKR- 127

Query: 125 SVQQLFLNTFNVI--ESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEIES 184
             +    N  N +  +       +++ +C  LV+L+L  V  D+ + ++LP +KI+ ++ 
Sbjct: 128 --RVCHFNVHNEVDDDDELVKMPLSLYSCERLVNLQLYRVALDHPESVSLPCVKIMHLDM 187

Query: 185 LWLERPDKRANHKEITMFPGCPNLESLVFF---VHLFQTATISAPKLKNLKLCASPDNDP 244
           +  +     A+     +  GCP LE L          +   + +  LK+ K+    D++ 
Sbjct: 188 VKYD-----ADSTLEILISGCPVLEELTIVRDPNDSLEVVCVRSQSLKSFKI----DSER 247

Query: 245 TFSEVQLLTPTLENISFVNVLPTVKSDYEFSRID---KVDIQLVSRFERDD 288
             S+  ++T     + ++N+       +    I    KVDI ++   E +D
Sbjct: 248 YESQNHVVTIDAPRLEYMNLCDHRSDSFIIHNIGPFAKVDIDVIFNVEYND 273

[Close]

BLAST of CsaV3_5G040130.1 vs. Swiss-Prot
Match: sp|Q6DBN6|FDL6_ARATH (F-box/FBD/LRR-repeat protein At1g51370 OS=Arabidopsis thaliana OX=3702 GN=At1g51370 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.3e-13
Identity = 67/223 (30.04%), Postives = 105/223 (47.09%), Query Frame = 0


Query: 10  EEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSFSIFKT 69
           EEDRIS LP+ L+ EIL  L+TK  V+T  LS +W+ LW  +P L+ D  +S        
Sbjct: 17  EEDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDLDPYAS-------- 76

Query: 70  EEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSS--KNRYDLTILADFLISYARSHSVQ 129
                S   +  +F+       R   IRKL        ++YDL    D     A +  +Q
Sbjct: 77  -----SNTNTIVSFVESFFDSHRDSWIRKLRLDLGYHHDKYDLMSWID----AATTRRIQ 136

Query: 130 QLFLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEIESLWLER 189
            L ++ F     H     +++ TC++LVHL+L      N + ++LP LKI+  E+  +  
Sbjct: 137 HLDVHCF-----HDNKIPLSIYTCTTLVHLRLRWAVLTNPEFVSLPCLKIMHFEN--VSY 196

Query: 190 PDKRANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLK 231
           P++    K I+   G P LE L+ F  ++    +   +   LK
Sbjct: 197 PNETTLQKLIS---GSPVLEELILFSTMYPKGNVLQLRSDTLK 212

[Close]

BLAST of CsaV3_5G040130.1 vs. TrEMBL
Match: tr|A0A0A0KSW6|A0A0A0KSW6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650430 PE=4 SV=1)

HSP 1 Score: 717.2 bits (1850), Expect = 1.8e-203
Identity = 364/367 (99.18%), Postives = 365/367 (99.46%), Query Frame = 0


Query: 1   MTIRKSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNS 60
           MTIRKSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNS
Sbjct: 1   MTIRKSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNS 60

Query: 61  SYSFSIFKTEEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISY 120
           SYSFSIFKTEEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISY
Sbjct: 61  SYSFSIFKTEEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISY 120

Query: 121 ARSHSVQQLFLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEI 180
           ARSHSVQQLFLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEI
Sbjct: 121 ARSHSVQQLFLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEI 180

Query: 181 ESLWLERPDKRANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPT 240
           ESLWLERPDKRANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPT
Sbjct: 181 ESLWLERPDKRANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPT 240

Query: 241 FSEVQLLTPTLENISFVNVLPTVKSDYEFSRIDKVDIQLVSRFERDDRNSRKSKFRELLS 300
           FSEVQLLTPTLENISFVNVLPTVKSDYEFSRIDKVDIQLVSRFERDDRNSRKSKFRELLS
Sbjct: 241 FSEVQLLTPTLENISFVNVLPTVKSDYEFSRIDKVDIQLVSRFERDDRNSRKSKFRELLS 300

Query: 301 VFHMARSFTLPLKLTMQVMSLDNFDALCFHNMKHLRLRTKETGLLLEQLLKAPNLENFRF 360
           VFHMARSFTLPLKLTMQVMSLDNFDALCFHNMKHLRLRTKETGLLLEQLLKAPNLENFRF
Sbjct: 301 VFHMARSFTLPLKLTMQVMSLDNFDALCFHNMKHLRLRTKETGLLLEQLLKAPNLENFRF 360

Query: 361 VKEVRIN 368
           VKE  +N
Sbjct: 361 VKEANVN 367

[Close]

BLAST of CsaV3_5G040130.1 vs. TrEMBL
Match: tr|A0A1S3CB41|A0A1S3CB41_CUCME (F-box/LRR-repeat protein At3g26922-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498689 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.0e-97
Identity = 215/357 (60.22%), Postives = 263/357 (73.67%), Query Frame = 0


Query: 10  EEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSFSIFKT 69
           E+DRISLLPD LLH ILS  NTK VVQTC+LSKRWKTLWT IPTLNFDYNS  S S F  
Sbjct: 15  EDDRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSSFNY 74

Query: 70  EEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSHSVQQL 129
           ++++ SK+ SFK FI RVLSK     I+KL YTSS N  D ++L + LI YA SH+VQQL
Sbjct: 75  DDEE-SKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNG-DESVLVELLICYAGSHNVQQL 134

Query: 130 FLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEIESLWLERPD 189
            +NT+N I  + WD+C  +  CSSL+ LK+VC F D+  VLALPSLKILEI+  W  R D
Sbjct: 135 CVNTYN-IGIYEWDYCFPI--CSSLIELKMVCGFVDDWGVLALPSLKILEIQCDWSAR-D 194

Query: 190 KRANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPTFSEVQLLTP 249
           +RAN+  ITMF GCPNLESLV   +LF++ATISAP+L+N KLCAS D + TF +V+LLTP
Sbjct: 195 ERANYDGITMFSGCPNLESLVLVDYLFESATISAPRLENFKLCASHDMELTFPQVELLTP 254

Query: 250 TLENISFVNVLPTVKSDYEFSRIDKVDIQLV-SRFERDDRNSR--KSKFRELLSVFHMAR 309
           TL+ ++FVNVLP ++SD EFS I KVDIQL  S F  D   ++  KSKF +LLSV H A 
Sbjct: 255 TLKAVNFVNVLPVLESDSEFSCIQKVDIQLKDSVFTTDGSQTQELKSKFIDLLSVLHNAS 314

Query: 310 SFTLPLKLTMQVMSLDNFDALCFHNMKHLRLRTKETGLLLEQLLKAPNLENFRFVKE 364
           SFTLP+K T QV+S  ++  L FHNM+HLRL+TKE+ LLL+ LLKAP LE    + E
Sbjct: 315 SFTLPMKAT-QVIS--SYKELSFHNMRHLRLKTKESDLLLKHLLKAPKLETIVVLNE 362

[Close]

BLAST of CsaV3_5G040130.1 vs. TrEMBL
Match: tr|A0A1S3CBU6|A0A1S3CBU6_CUCME (F-box/LRR-repeat protein At3g26922-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498689 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.6e-82
Identity = 196/357 (54.90%), Postives = 238/357 (66.67%), Query Frame = 0


Query: 10  EEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSFSIFKT 69
           E+DRISLLPD LLH ILS  NTK VVQTC+LSKRWKTLWT IPTLNFDYNS  S S F  
Sbjct: 15  EDDRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSSFNY 74

Query: 70  EEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSHSVQQL 129
           ++++ SK+ SFK FI RVLSK     I+KL YTSS N  D ++L + LI YA SH+VQQL
Sbjct: 75  DDEE-SKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNG-DESVLVELLICYAGSHNVQQL 134

Query: 130 FLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEIESLWLERPD 189
            +NT+N I  + WD+C  +  CSSL+ LK+VC F D+  VLALPSLKILEI+  W  R D
Sbjct: 135 CVNTYN-IGIYEWDYCFPI--CSSLIELKMVCGFVDDWGVLALPSLKILEIQCDWSAR-D 194

Query: 190 KRANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPTFSEVQLLTP 249
           +RAN+  ITMF GCPNLESLV   +LF++ATISAP+L+N KLCAS D + TF +      
Sbjct: 195 ERANYDGITMFSGCPNLESLVLVDYLFESATISAPRLENFKLCASHDMELTFPQ------ 254

Query: 250 TLENISFVNVLPTVKSDYEFSRIDKVDIQLV-SRFERDDRNSR--KSKFRELLSVFHMAR 309
                                   KVDIQL  S F  D   ++  KSKF +LLSV H A 
Sbjct: 255 ------------------------KVDIQLKDSVFTTDGSQTQELKSKFIDLLSVLHNAS 314

Query: 310 SFTLPLKLTMQVMSLDNFDALCFHNMKHLRLRTKETGLLLEQLLKAPNLENFRFVKE 364
           SFTLP+K T QV+S  ++  L FHNM+HLRL+TKE+ LLL+ LLKAP LE    + E
Sbjct: 315 SFTLPMKAT-QVIS--SYKELSFHNMRHLRLKTKESDLLLKHLLKAPKLETIVVLNE 332

[Close]

BLAST of CsaV3_5G040130.1 vs. TrEMBL
Match: tr|A0A0A0KUU7|A0A0A0KUU7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650440 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.6e-66
Identity = 161/294 (54.76%), Postives = 201/294 (68.37%), Query Frame = 0


Query: 11  EDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSFSIFKTE 70
           ++RISLLPD LLH ILS LNTK VVQTC+LSKRWKTLWT IPTLNFDYNS  S S+FK +
Sbjct: 3   DNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFKYD 62

Query: 71  EDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSHSVQQLF 130
           +++ SK+ SFK FI RVLS     +I KL YTSS N  D  +L + LI YA SH VQQL 
Sbjct: 63  DEE-SKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNG-DECVLVELLICYAGSHKVQQLC 122

Query: 131 LNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEIESLWLERPDK 190
           +NT+N+   + WD+C  +  CSSL+ LK+                    I+  W  R D+
Sbjct: 123 INTYNIC-IYEWDYCFPM--CSSLIELKM--------------------IQCDWSAR-DE 182

Query: 191 RANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPTFSEVQLLTPT 250
           RAN+  ITMF GCPNLESLV   +LF+TATISAP+L+  KLCAS D + TF +V+LLTPT
Sbjct: 183 RANYNGITMFSGCPNLESLVLVDYLFETATISAPRLEIFKLCASHDMELTFPQVELLTPT 242

Query: 251 LENISFVNVLPTVKSDYEFSRIDKVDIQLV-SRFERDDRNSR--KSKFRELLSV 302
           L+ ++FVN+LP ++SD EFS I KVDIQL  S F  D   ++  KSKF +LL+V
Sbjct: 243 LKTVNFVNMLPILQSDSEFSCIHKVDIQLEDSVFTTDGSQTQELKSKFIDLLTV 270

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BLAST of CsaV3_5G040130.1 vs. TrEMBL
Match: tr|A0A061FTH1|A0A061FTH1_THECC (F-box/RNI-like superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_045476 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 5.7e-27
Identity = 119/357 (33.33%), Postives = 181/357 (50.70%), Query Frame = 0


Query: 1   MTIRKSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNS 60
           +T  K  +  EDR+  LPD +L +I+SFLNTK  VQTCVLSKRWK+LW  +P L+F++++
Sbjct: 3   LTSEKRNKKNEDRMGKLPDAVLLKIMSFLNTKQAVQTCVLSKRWKSLWQSLPNLDFNFDT 62

Query: 61  -SYSFSIFKTEEDDIS-KQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYD-LTILADFL 120
             +   I   +E+ +  K  SF NFI +VL +     + K+   S  + YD    L D L
Sbjct: 63  FPFQQEIDDEDEERVEMKMASFSNFISQVLFRRCPTDLVKVCVQS--HIYDPRCFLVDGL 122

Query: 121 ISYARSHSVQQLFLNTFN----VIESHFWDFCINVNTCSSLVHLKL----VCVFADNL-D 180
           I YA  H+VQQL ++  +    +    FW       TC SL  L+L    V + A  L  
Sbjct: 123 ICYAVKHNVQQLTVHPRSDYPYLFPESFW-------TCQSLTALELKANDVTLSAIELPK 182

Query: 181 VLALPSLKILEIESLWLERPDKRANHKEITMFPGCPNLESLVFFVHL---FQTATISAPK 240
           +LA P+LK L +       P     + E T+F GCPNLE+L  F  L    +   I A K
Sbjct: 183 LLACPALKSLHLSGFSPFGP-----NFETTVFSGCPNLETLELFDILAVGSEGLCIDALK 242

Query: 241 LKNLKLCASPDNDPTFSEVQLLTPTLENISFVNVLPTVKSDYEFSRIDKVDIQL-VSRFE 300
           L +L L  +   D    +V++  P L    +  + PT+      + +D V   +   RF+
Sbjct: 243 LTSLVLSFALIGD---GKVEIYAPQLTTFKYSGIAPTMWRTDSLANLDDVYFDIKTPRFK 302

Query: 301 RDDRNSRKSKFRELLSVFHMARSFTL---PLKLTMQVMSLDNFDALCFHNMKHLRLR 339
            ++R+        +L+ F  A+S TL    +K+  +  SL   + L F N+KHL+++
Sbjct: 303 HNERDYVLCLI-NILNKFRHAKSLTLSTAAVKVLTKFPSLVGRNRLRFTNLKHLKIK 341

The following BLAST results are available for this feature:

BLAST of CsaV3_5G040130.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN52678.1	2.8e-203	99.18	hypothetical protein Csa_5G650430 [Cucumis sativus]	[more]
XP_004141639.1	4.0e-202	100.00	PREDICTED: F-box/LRR-repeat protein At3g26922-like [Cucumis sativus]	[more]
XP_008459617.1	1.6e-97	60.22	PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo]	[more]
XP_008459618.1	5.5e-82	54.90	PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X2 [Cucumis melo]	[more]
XP_022141791.1	1.9e-66	52.37	LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like [Momordica char...	[more]

BLAST of CsaV3_5G040130.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G26030.1	7.5e-17	27.84	F-box/RNI-like/FBD-like domains-containing protein	[more]
AT2G04230.1	1.3e-16	32.33	FBD, F-box and Leucine Rich Repeat domains containing protein	[more]
AT3G26922.1	1.8e-15	30.42	F-box/RNI-like superfamily protein	[more]
AT5G53640.1	1.8e-15	30.80	F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), FBD-li...	[more]
AT1G16930.1	4.1e-15	25.09	F-box/RNI-like/FBD-like domains-containing protein	[more]

BLAST of CsaV3_5G040130.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8H1M0\|FDL16_ARATH	1.3e-15	27.84	F-box/FBD/LRR-repeat protein At2g26030 OS=Arabidopsis thaliana OX=3702 GN=At2g26...	[more]
sp\|Q6NKX3\|FDL14_ARATH	2.3e-15	32.33	F-box/FBD/LRR-repeat protein At2g04230 OS=Arabidopsis thaliana OX=3702 GN=At2g04...	[more]
sp\|Q9LJF8\|FBL47_ARATH	3.3e-14	30.42	F-box/LRR-repeat protein At3g26922 OS=Arabidopsis thaliana OX=3702 GN=At3g26922 ...	[more]
sp\|Q9FZ52\|FDL3_ARATH	7.4e-14	25.09	F-box/FBD/LRR-repeat protein At1g16930 OS=Arabidopsis thaliana OX=3702 GN=At1g16...	[more]
sp\|Q6DBN6\|FDL6_ARATH	1.3e-13	30.04	F-box/FBD/LRR-repeat protein At1g51370 OS=Arabidopsis thaliana OX=3702 GN=At1g51...	[more]

BLAST of CsaV3_5G040130.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KSW6\|A0A0A0KSW6_CUCSA	1.8e-203	99.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650430 PE=4 SV=1	[more]
tr\|A0A1S3CB41\|A0A1S3CB41_CUCME	1.0e-97	60.22	F-box/LRR-repeat protein At3g26922-like isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A1S3CBU6\|A0A1S3CBU6_CUCME	3.6e-82	54.90	F-box/LRR-repeat protein At3g26922-like isoform X2 OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A0A0KUU7\|A0A0A0KUU7_CUCSA	1.6e-66	54.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650440 PE=4 SV=1	[more]
tr\|A0A061FTH1\|A0A061FTH1_THECC	5.7e-27	33.33	F-box/RNI-like superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_045476 PE=4...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR001810	F-box_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_5G040130	CsaV3_5G040130	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_5G040130.1.exon1	CsaV3_5G040130.1.exon1	exon
CsaV3_5G040130.1.exon2	CsaV3_5G040130.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_5G040130.1.cds1	CsaV3_5G040130.1.cds1	CDS
CsaV3_5G040130.1.cds2	CsaV3_5G040130.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_5G040130.1	CsaV3_5G040130.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 17..58 e-value: 1.0E-4 score: 31.6
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 13..51 e-value: 1.5E-7 score: 31.0
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 11..59 score: 9.312
None	No IPR available	PANTHER	PTHR31639	FAMILY NOT NAMED	coord: 7..360
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 11..61