CsaV3_4G029940.1 (mRNA) Cucumber (Chinese Long) v3

NameCsaV3_4G029940.1
TypemRNA
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4 : 19678122 .. 19681222 (-)
Sequence length348
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCATAGGCACACACATCATTTGGTCATATGCACATAGTCGTGTGCACTGCATGGTCGCGCACATCCCCACGCACTTGGCCATGTGCATATGACCTTGGTTGTGTAGGACTTGCGATAGCACGAGCTACTCCTGATGCCTTTGGACTTTGTCGGGGCATGATTAAACTACTCCTTGGTTGTGCTGGGGAGTCTTGCAAAAATGTTTTCATTATTGTGGGGCTTATTTTGAGGTGTGACACCCTCCTCAACTCAATCTCGCAATGTCCTTATTACGCTTGGCTTGAATTATTCAATTTTGTCCAAGAATTGCCAAAGTAAGTTATCATGTTTCCAACTAACTTGTCACGCTTTTAGGCTAACCATCCCATACAATTAAGTATTTCATGTAGATGGTAATTGCCCTCCACTTTATCGTTTGTTCGACCAACATTTCTTTAACCTTTTTATTGAATTTTGATTCTATGAAAATCGAAGCTGAGAGGGTTCACTCTAACTTGGATTTTCTATGTCTTCATAGAAAGGCTTTAACATGCTCACATGAAAGATATCTTTTATGGTAAACTGAGACGATATGTTGTTCTTCCCACTCATTCCGTGATAAGAAATGAGTCTTCTTATCTTTTGGATTAAGCCTTTGTGTGTGCCTTGCAAAGTGACTTGAATTGGTTTGGTAGGAATTTTATTATTACTTTGTCACCCACTTGGTACTCCTTCGATCATCTCTTTTAATTTACCCATTTCGTCATTTGTTTGGTTGCCTTTTCAAGACATGTCCTTATAATATATTGTTCCTCTTACCACTCTTTGGCAAATTTATATGCAGAAGGGTTAGGGCAAGGGTTAGGGCCTTCATAAGAAGCAACCAAGGCACTAAGTGCATTTGGTTGGTGTTTCATCACCATTTCCTAAGTTGTTCACTGGTTTATTTATATTATTAACCTTCAATTTATTATGCCCAAATATTTACCAAATAAATGTGTCACATCAAGTCAATTAATCAAAACTTCTTATGCATTATATTTTCCAATCATGCAATGAATAAATTATCATTTGTACCTTTTATTTTACTTACTTATTATCCATTAAAATTGCTAAATTTATAAATAACTATAATGCATAAATTAGTATTAAATAATCAATTAAATAGGAGAAAATTTCTTCTAAAATTTGACAACTTACCCAAAATTTCGAACACCACAATCTCGACTGAGAGAGAGTCACGTACATGATTCAACTCAGGATGGTACTCCAAACTCGGCTGATAAAATTTCTTCATGCCATTTTCTCACTGTCGAATGGTACTCCAAACTCGTTGCCGACCACTCCCTCTCGTCGGTGGAGCTGGAAGCTCCTTGAGAATTATGAATGCCTCCAAGTGTGGACTCCATAAGAGAGAATAGTCTTCGTAGAAAATGAAATGGAGAAATTCTTATTCATCATACAGAGGAGAGATGTTCACACTTCCTTTCATCTCTTTTGATTTTGTGAAAAACTTCTTCACTGTGAAATATGAATGAGAATCTCTCTCTTGACATCACAGAACATCCAAGAATCACACCAACACATCTACTTTGATCATCACACATGGCTTTGCAAGCCAAACAACACTCTCTCGACGAATTGAGCTTAAAATCACAACCCCATTTCACAGCATCTCCCCACAGCTCCAATTGAACAATTCCTCGGCAACACTCTTCGTTGTGCTCCCCACTCTTGAAAAACCACCATTGTTAACAAAATCAAAAGTGGAAGAAACCTTGACGGAAGTCGGTCGAATAGACCCAATTAAGCACCGATAGACCATAAAGCAGGAAGAAACGTCCACGAGGAAGACGATTGCAAGCGCACAAACACCACGCACGACGTCTCTTTGCCTCTAGTCCATCTGATCATTGCTACAGTGAGTTCGTATTGGAAGACGAAGTGGAAATTTCTCTTGGGTTTTAAGAAACCAATTTTCTAGATATTCGATAACATTTGTAAATTTTGCTTCGCACGACTCCATGTTAAATTTGAGGTTACAATGCCCACTACGCAATTTGAATAGCTCGACCTACTGCTAAGTTTAAGAGGACTGCGGACTTTCATAAGTGTGTTCTTTGGATGTTCTTTCCCTTTCTTCACCTATCTTTCTGTAACGAAAATATGAACTCCAAAGAGAATAAGACACGCAACAAATTTTTTTCCCTTTTATTTTCTTCCTAAGTCAATCCTCTTCTCTACTCCCATAATCAATCTCTTTCTTCCAATTCTTCGTCACAGAGAGATTTCTTGTTTATCATGTCCAAGTATGGCATATGTTTTAATTCTCTTTTATGTTTTGTGTTTCTGTTCTAGGGCTGTTCTATTGTTTGGTTGGGTTTGTGTAATTTGTGACAATTTTGAAATTTGCATTACTTGTTGTGTGATCTTCCTGCCCTTATTCATGCTACCATTAATTTCCCACACCAGAGCTTTCGAATGTTAGCACCATCATTTCATGTCTCTCAATTCATTGTGGTACATTGTTGTTTTTCATTTACAAAAGATATACCAATAACATTTTGTACTGAATTTCAGCTACAGCTACTCGGGATATGGAGCTTATTCTGGTAAGGTAAGCAAGCAATTCTATTTCTTCACTGCTTTAGAACTTTTGAAGTGCTTTTCCTGTGAAACTATGGGTTCAAAAAATGTATTTTGCCATTTGATCTTCTTCTGCACACTTTCTTTTGGCTGCAACATGCAGGGCAGAGTTAGCACAAGGGCTTGAAATATAAATTTGGTTAAAACTATTCTATCACTCTTCTTTATGATGCCACTGCAGCTTCTACTTCCAAAATTCATCATGGCATCTCTAATTTCCTCCTCTATAGCTTTTGAGTTCAGTAATAAGTAGTGATTTGTATTATTTTGTAGTTGTTCACTCCCAAATTGATATTGACATTTACTTGTTAGACTCAGTCAATTTTCATCTTCTTTCTTTTTATTTAATTCTTTATCATTGATTTTTAAAGTGGACTTTTGATTCTATTGTTATCATTTTTCACGAAGGTTTGTGTAAATGAAATGAACATGGGTGTTTTACTCATCAACTAATTGATAATAATTTTGGTCTCAG

mRNA sequence

ATGCACATAGTCGTGTGCACTGCATGGTCGCGCACATCCCCACGCACTTGGCCATGTGCATATGACCTTGGTTGTGTAGGACTTGCGATAGCACGAGCTACTCCTGATGCCTTTGGACTTTGTCGGGGCATGATTAAACTACTCCTTGGTTGTGCTGGGGAGTCTTGCAAAAATGTTTTCATTATTGTGGGGCTTATTTTGAGGTGTGACACCCTCCTCAACTCAATCTCGCAATGTCCTTATTACGCTTGGCTTGAATTATTCAATTTTGTCCAAGAATTGCCAAACTACAGCTACTCGGGATATGGAGCTTATTCTGGTAAGGGCAGAGTTAGCACAAGGGCTTGA

Coding sequence (CDS)

ATGCACATAGTCGTGTGCACTGCATGGTCGCGCACATCCCCACGCACTTGGCCATGTGCATATGACCTTGGTTGTGTAGGACTTGCGATAGCACGAGCTACTCCTGATGCCTTTGGACTTTGTCGGGGCATGATTAAACTACTCCTTGGTTGTGCTGGGGAGTCTTGCAAAAATGTTTTCATTATTGTGGGGCTTATTTTGAGGTGTGACACCCTCCTCAACTCAATCTCGCAATGTCCTTATTACGCTTGGCTTGAATTATTCAATTTTGTCCAAGAATTGCCAAACTACAGCTACTCGGGATATGGAGCTTATTCTGGTAAGGGCAGAGTTAGCACAAGGGCTTGA

Protein sequence

MHIVVCTAWSRTSPRTWPCAYDLGCVGLAIARATPDAFGLCRGMIKLLLGCAGESCKNVFIIVGLILRCDTLLNSISQCPYYAWLELFNFVQELPNYSYSGYGAYSGKGRVSTRA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsaV3_4G029940CsaV3_4G029940gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsaV3_4G029940.1CsaV3_4G029940.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_4G029940.1.cds3CsaV3_4G029940.1.cds3CDS
CsaV3_4G029940.1.cds2CsaV3_4G029940.1.cds2CDS
CsaV3_4G029940.1.cds1CsaV3_4G029940.1.cds1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_4G029940.1.exon3CsaV3_4G029940.1.exon3exon
CsaV3_4G029940.1.exon2CsaV3_4G029940.1.exon2exon
CsaV3_4G029940.1.exon1CsaV3_4G029940.1.exon1exon