CsaV3_4G023710.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGCTTTCTCAAGAAATCGAAATTCCCTAGAGATTGGAGAAAAAGAGTAATACAAAAAGACGTATTGAGAAAAATTGCGAGCGAAATCTATAACGATACATAAGGAATTTTCTAGACTTTGGTTCATTCGTTGCGAATATTTTGATTAGGGTGTTCTAGTTCTCGATCTGGTTGACGATTTTTTGATCTGAAAAAGGGGGATAGATTTTGTTTTATCGATCGATCGATCTTTAATTTGTTAGGGTTTTATTTCTTCTCTTTGGATTTGATTTAGTTGTACTATGAACGATCAGAATTCGATGATTAATCAAGCTCAAATGATTAGTATGAACCATCCGCAGATGGCAAACCAGCCTCCTCATGTGATCAACCAACAACAGGTGATTAATCAACCTCAGTTTCTGAATCAAAGCCAGGTAATGAGCCATTCTCAGATAATTTCGCCAAATCTTTTGCCGCAGCAGTCTCAGGCCATGTTGCAGTCCGGGAGGATCATCAGTCAGACTCAGCCGCCTATGATGAATGGCAACTATAAGGTATGGGGTCACCCGCAGGCTCCTTTGGATCCTAACAAGAAGTACCGTAACTTCCCGAAGCCTAACTATGGAAATATGAAGCAGTCAGGGTCGGGGCGAGGCAATTGGAAGGGAAAAGGTGTTAGTGACAAGAGGATAAATAATAGGAGATCGGTAAAACCCTTACCGGGTTCTCTAAGTGCTCAAAATAATGGTGGAGGGTATCAACCTCCAAGTCTTTATGAGTTGCAGTCTCAAAATCGTAACAAAGCTCGTAAGTTCTATTCAAAAAAGAAGTTCAACAACAGGTTTGCACCTTATGCACCTCGGAATACATCGTCTTTTATAATTCGTGCTAAAAAGTCTGGTGGGATCGCTTCACTTGTGTCTCCTTGTCCTGTAACTCCAGCAGTACTCCCTTCTCCAATGTTCTCCCCTTCGAGGGAGGCGTTGGGTGATATGGCGAAAGAAGAATGGGGTGTCGATGGTTATGGATCAATGAAAGGGTTGATTAGGCTTCGAGGTTCTGAGCATAAGGCGGAAGTGCAGGTGGAAGAAGAAGAGGAAGGCAGTGGTGGGTCGAGTGATAGTGATGTAGAGGAACATTTGGAGGTAGAACGTAGATTGGATCATGACTTGAGCCGGTTTGAGATGATATATCAGAACTACGGAGTAGAGTACAATAACTGTTTGGAAAACACGGTTGATGATCAGGATAGCCATATAGCTCAGTTGGAAGAGGAGAACTTGACACTGAAGGAGAGACTTTTTATTATGGAAACTGAGGTTGTTGAGTTGAGGAGGAAGTTGCAACTTCTCGAGGGGGGAAACGCAGCTATTGACGATGTGAATGAGGAAGTAGTGGAGAACGTATCTGAGAATGAGAGTGATGGAGGGTTGGAGATGGAGTATGTATCTGAAATTAGACAAAACCAAGATATTGATGTTAATTCTAAGGAGGAAGATGAAGAAGTCTTAGAGATTGAGGGGAAATCGTAAATAGGAATGCATACACTACCATAATTGTGGGTATAGATTACACTTAAATTTAAGAAATGGAAAGAAAAATAGAGGGGTGCTGGCGGATGACAATTATTTACTGCAATCTATTTGGTTAATTGAAACTAATTTCTGAAAACCAAATTCGTTGTCCTTTATTTTGCATTTCAAAGCCAGCGGTTGCCTTTCTTCTCCTTGAAATCTCTTTTACCTCTTACCCACCATGGAATAGCCTTAGCTTGCTTACCAAGAAAGTAGTTAACGATCCTGACGTTCAAAGTCACTGCAATTGAGATTGAAGTGGCGGCCACTGAAACGGCTTCCCGTCGTATTCAGGTTCAGTTCTGAAGCTCCCGTCTCTGTTCTTGTAGAAATTTGTCTGACAAAAGTAGAATATACCATGCGAGATTCAATTGCCGCAGAAGAAAGTTTCATAGTTTTTGTTTTTCAAAGATTTTTCGATTGAGTAAAAAATATCCATCCCTTGTGGAGAAAAGATTAATAAAAACCATGTGGGCCTTAGATGCAATGTGGCGTTTTCTCACATCAACACAGCTGCTCTCTCAAAGTTGTATATTATTGTATTGTGTTCCTTTTATAACATTGTCCATTTATATCTTTAATACCATTGTAATTACCTTTTATAACTGCTTAATTTCTATCCCTATAATTCCCATGTATTATAAATTTGAATTAAATGCTCCTCGAGCAAATCATAAGTTAAGTCAGTTCTTTTCCTCTAATGGTGATGCTGAACAAATTCAGTTCAGTCGCAATGAATTGTATGCTTACCCTTTTCTTTTCAATTTGGTGCTTTGGCTGTAACATTTCTAACATGTCTTTGGTTAATAGAAAGTGCTCCAAGACTGCTATAGATGTAGAAAAACTAACTTACAAACCCATGCAGTCTTTTACTTGAATCTTCTTTTTGATTTTTCCCTTCAGTGGTTCTAAGATTGAAGATGAACTCTCTTTTCTCTTAAGTGTTTCTTTCTCAATTTTGCATTTGGTCTCATTCCCCATTCCCCAGAAACGAAACCATTTGTGTAAGATGACAGCAGTGAATTCAAGTTGCCGTGTTCTTTGTTTTTGTTGACTTACAAATCATTTTCCAATTTAACATAGTGCCTGCTCTGCCTGTTTGTAAATTGAGCACGATTTCACCCAAATCAATATACATAATTTATTTCTGTATAATTTCTATGGTGCAGGAAGTTTAATTTTGCTTGTGGTGAGAGAATGTGAAGGGCTATGATGGGCCGTGGCTTGGAGACAGGGAATGATATGAGTTAACTGGTTTCTCTGATCTTTTCTTCCTCTTGGTCTTGATGAGTTAAGCCAAGGCAACATCAATTAGTGTTGTGATGGTAATAGCCCATTATGACAATGTTGATGTTTCAGATCTATGGTCCAATGGTGAACACTAGTTGTTATCTAACTCATCACTAAATTGTTGTAATTTGGTTACTCTTGATTTTCTAATGATTGAAGATTAAAAAAGGTTATGAACGTTTTCACTATGAGCAAGAAATAAACTCTTGATTTATAGGAAGCTAGGATAAACCATCAATTTAAGACTCTCATTGATAGTTCCCTATGATTTTTCTTTAATTGAGAAATATACCTCATAACTTGTACGCACATGGTTTATGTCGATTCTATTTCCTTTCTTTCCTTAATGGCTTGGGTTTGTGAATTCTATTTCTTCTTTAATTGAGAAATATACCTCATAACTTGTACGCACATGGTTTATGTCGATTCTATTTCCTTTCTTTGCTTATTGGCTTGGGTTTGTGAATTCTATTTCTATTTGTTCCTTGATGGCGGGGCTTCGTCACCTCTATTTCTCCTTTTACATTGGTCTTGTTGTGGATGGCTGTTAAGTTAAATTTAATATTGTGCTTGAATCGTTGGTATTGGAAGTCAGTATGCAATAATGGTCCTACTTCTCTTAAGCAGAGAGAGGAGTCTGACATTTGCAAGGTAAGGCATTTGCTATTAAACCTAGAGGTGTCATTGAAATCTATTTTCCATTGTTATTATCTTGGAAGCTTTATGGTTTCTTTTGTGACATAAACACCTCTTACTCTTATTTGATTTGGATTGTGCTTTGATTGAAGGATAGAGGGAAGTGATTATCGATAATGATGGGTATATTCTCTCTCCCTTTTTTTACAATAAGTATATTAGCAGCAAAATTTACTACATGTTCTTCTATATTGAAAGGAAAGACCAAAAAATGCATAGGGTGTCCATGAGCATATCTGCAAGATGATAAGGTGATGAACTAAAATGACTCACAAAAACCATATCATTAAAGTGGGAGCCCGAGACATACAGGGAAGGTATGGTTATGATTTATGCATTTCTGAAGTATAGTCATTTTGTTACAATGGAGGCTATATTTTTTACTTTCTGGTATATGCTTCATATTGTTGCAGTAGCACTTAATGTGTGTAATATTAAGTCATCATTTATAATGCACTTAGTATGGACATTCTTTATAATGCTATGTGAACTTTTCAAATGGCATACCCTTTTCAACAAAGCTCTCCAAACCTTGTTTGTAATATTTGCATTTTTTGATATATGTGCTGTTGTCTCAGGTTCATTGTTGATATTGGGCATCCTTTGACAAAGATTTATTTTGTATGGTAGAATTTTATTTGCCACTTCCATTCTCTCTAAATTTTCAGGAATTTTGATTGCTTTAGAGATCTTTTCAAGAGGAGTAAATTTGAAATTTTGAAGAAACAACAGTTGTCTTAACCTAAACTTTCTTTAGGTGCATTCCGCATGCACACTTGACTAAGACCCTTATATTTGAGGTGCAAATCCGATGTGTCAAAGACAATTATGTAATGGATCGTGCCCAACTTTAGGTAGTCCTGTCAATTAGAAGGAGGGCCTCTCTCATGCTAGCTAATGATCAGTTTTATTAACTCTGAGGTTTAGTTCTTTGAGTAATTTATACTTGACATACTATTAGTGGGGTATATAAATGCTTTCATGTGTATCTTGAAACATGTACTATAAATGGTTCTTATCTGAATCTGCTATGCCTTCTTTTACGTCTTGAGTTGGAGATTAAGTGATAGTGAAGGATGAAATTGGGTAAGCCATAGATGAGCATCTTTTCGAAGATGTCAAAGCAAAACATCGAAGAAATGAAAGGCAAACTTGTTTTGGAGAAGTAAAATGAATGCAAGCATTTGGTTGAGAAGTTGGTTAATATTTTACACACAGGTTCGAAGATTGGAAACGAGGCCATAGTGAATGACAGCACAATAGAGTTGTCCCTGTAATGATAGTTGTGGATGTAAAGGCAGGCTGTGAAGACTCGATGGAGATTTCCAAATCAGGAAGCAAAGAAGATATCTTTCCTTATTGCAAATTGAAAGCATCTTTTGTATGCATTTCTAATGAAAACATATCTTAAAAATCAACTGTGGTAAATGATTGGCCTACTCGCCCGAAGTGCTTGCATAATTGATTAATTTTGTGTAAAACGTAAGGTATTTCTTGATGAATTGTTTTGTTCGAATTTCATGGTTGTTGTTATCTTCCGCAGCTTCTTAGTTGCATATTTATTTCTCTTGTTTGAAAAGGCTGATGTTTCTCAATCAAGTCTGCTTCATGTTTAGCCTATGTTCGCCTTGCTAGTTTCTTGGTTGTATATTTTTTGTCCTTATTTTCTTTCTTTTGGTGCAGTCTACTCGGTGGTTCATGGGATGAGTCTTCCAAAGATGCTTGTTTGTGCTTTATATCCTGATTTTATGCAATTTCTAAATTTATCAATACTTTAGCATTTTGTATTCTAACTTCCAAGTGTTATTTTGTTATGAAAAATATTTGGGCATATTCTAGATATGATATCATTAATGTGATATTTTCTCCAACAATTTTGAGGATATCGATGACAAATACTTTAAAAATAAAATTTATTAGCAATAAACTTCTTTTTAAT ATGAACGATCAGAATTCGATGATTAATCAAGCTCAAATGATTAGTATGAACCATCCGCAGATGGCAAACCAGCCTCCTCATGTGATCAACCAACAACAGGTGATTAATCAACCTCAGTTTCTGAATCAAAGCCAGGTAATGAGCCATTCTCAGATAATTTCGCCAAATCTTTTGCCGCAGCAGTCTCAGGCCATGTTGCAGTCCGGGAGGATCATCAGTCAGACTCAGCCGCCTATGATGAATGGCAACTATAAGGTATGGGGTCACCCGCAGGCTCCTTTGGATCCTAACAAGAAGTACCGTAACTTCCCGAAGCCTAACTATGGAAATATGAAGCAGTCAGGGTCGGGGCGAGGCAATTGGAAGGGAAAAGGTGTTAGTGACAAGAGGATAAATAATAGGAGATCGGTAAAACCCTTACCGGGTTCTCTAAGTGCTCAAAATAATGGTGGAGGGTATCAACCTCCAAGTCTTTATGAGTTGCAGTCTCAAAATCGTAACAAAGCTCGTAAGTTCTATTCAAAAAAGAAGTTCAACAACAGGTTTGCACCTTATGCACCTCGGAATACATCGTCTTTTATAATTCGTGCTAAAAAGTCTGGTGGGATCGCTTCACTTGTGTCTCCTTGTCCTGTAACTCCAGCAGTACTCCCTTCTCCAATGTTCTCCCCTTCGAGGGAGGCGTTGGGTGATATGGCGAAAGAAGAATGGGGTGTCGATGGTTATGGATCAATGAAAGGGTTGATTAGGCTTCGAGGTTCTGAGCATAAGGCGGAAGTGCAGGTGGAAGAAGAAGAGGAAGGCAGTGGTGGGTCGAGTGATAGTGATGTAGAGGAACATTTGGAGGTAGAACGTAGATTGGATCATGACTTGAGCCGGTTTGAGATGATATATCAGAACTACGGAGTAGAGTACAATAACTGTTTGGAAAACACGGTTGATGATCAGGATAGCCATATAGCTCAGTTGGAAGAGGAGAACTTGACACTGAAGGAGAGACTTTTTATTATGGAAACTGAGGTTGTTGAGTTGAGGAGGAAGTTGCAACTTCTCGAGGGGGGAAACGCAGCTATTGACGATGTGAATGAGGAAGTAGTGGAGAACGTATCTGAGAATGAGAGTGATGGAGGGTTGGAGATGGAGTATGTATCTGAAATTAGACAAAACCAAGATATTGATGTTAATTCTAAGGAGGAAGATGAAGAAGTCTTAGAGATTGAGGGGAAATCGTAA ATGAACGATCAGAATTCGATGATTAATCAAGCTCAAATGATTAGTATGAACCATCCGCAGATGGCAAACCAGCCTCCTCATGTGATCAACCAACAACAGGTGATTAATCAACCTCAGTTTCTGAATCAAAGCCAGGTAATGAGCCATTCTCAGATAATTTCGCCAAATCTTTTGCCGCAGCAGTCTCAGGCCATGTTGCAGTCCGGGAGGATCATCAGTCAGACTCAGCCGCCTATGATGAATGGCAACTATAAGGTATGGGGTCACCCGCAGGCTCCTTTGGATCCTAACAAGAAGTACCGTAACTTCCCGAAGCCTAACTATGGAAATATGAAGCAGTCAGGGTCGGGGCGAGGCAATTGGAAGGGAAAAGGTGTTAGTGACAAGAGGATAAATAATAGGAGATCGGTAAAACCCTTACCGGGTTCTCTAAGTGCTCAAAATAATGGTGGAGGGTATCAACCTCCAAGTCTTTATGAGTTGCAGTCTCAAAATCGTAACAAAGCTCGTAAGTTCTATTCAAAAAAGAAGTTCAACAACAGGTTTGCACCTTATGCACCTCGGAATACATCGTCTTTTATAATTCGTGCTAAAAAGTCTGGTGGGATCGCTTCACTTGTGTCTCCTTGTCCTGTAACTCCAGCAGTACTCCCTTCTCCAATGTTCTCCCCTTCGAGGGAGGCGTTGGGTGATATGGCGAAAGAAGAATGGGGTGTCGATGGTTATGGATCAATGAAAGGGTTGATTAGGCTTCGAGGTTCTGAGCATAAGGCGGAAGTGCAGGTGGAAGAAGAAGAGGAAGGCAGTGGTGGGTCGAGTGATAGTGATGTAGAGGAACATTTGGAGGTAGAACGTAGATTGGATCATGACTTGAGCCGGTTTGAGATGATATATCAGAACTACGGAGTAGAGTACAATAACTGTTTGGAAAACACGGTTGATGATCAGGATAGCCATATAGCTCAGTTGGAAGAGGAGAACTTGACACTGAAGGAGAGACTTTTTATTATGGAAACTGAGGTTGTTGAGTTGAGGAGGAAGTTGCAACTTCTCGAGGGGGGAAACGCAGCTATTGACGATGTGAATGAGGAAGTAGTGGAGAACGTATCTGAGAATGAGAGTGATGGAGGGTTGGAGATGGAGTATGTATCTGAAATTAGACAAAACCAAGATATTGATGTTAATTCTAAGGAGGAAGATGAAGAAGTCTTAGAGATTGAGGGGAAATCGTAA MNDQNSMINQAQMISMNHPQMANQPPHVINQQQVINQPQFLNQSQVMSHSQIISPNLLPQQSQAMLQSGRIISQTQPPMMNGNYKVWGHPQAPLDPNKKYRNFPKPNYGNMKQSGSGRGNWKGKGVSDKRINNRRSVKPLPGSLSAQNNGGGYQPPSLYELQSQNRNKARKFYSKKKFNNRFAPYAPRNTSSFIIRAKKSGGIASLVSPCPVTPAVLPSPMFSPSREALGDMAKEEWGVDGYGSMKGLIRLRGSEHKAEVQVEEEEEGSGGSSDSDVEEHLEVERRLDHDLSRFEMIYQNYGVEYNNCLENTVDDQDSHIAQLEEENLTLKERLFIMETEVVELRRKLQLLEGGNAAIDDVNEEVVENVSENESDGGLEMEYVSEIRQNQDIDVNSKEEDEEVLEIEGKS
BLAST of CsaV3_4G023710.1 vs. NCBI nr
Match: XP_004142245.2 (PREDICTED: uncharacterized protein LOC101217509 [Cucumis sativus] >KGN54109.1 hypothetical protein Csa_4G286340 [Cucumis sativus]) HSP 1 Score: 645.2 bits (1663), Expect = 1.5e-181 Identity = 410/410 (100.00%), Postives = 410/410 (100.00%), Query Frame = 0
BLAST of CsaV3_4G023710.1 vs. NCBI nr
Match: XP_008449763.1 (PREDICTED: uncharacterized protein LOC103491551 [Cucumis melo] >XP_008449764.1 PREDICTED: uncharacterized protein LOC103491551 [Cucumis melo]) HSP 1 Score: 627.9 bits (1618), Expect = 2.5e-176 Identity = 396/410 (96.59%), Postives = 402/410 (98.05%), Query Frame = 0
BLAST of CsaV3_4G023710.1 vs. NCBI nr
Match: XP_008449767.1 (PREDICTED: uncharacterized protein LOC103491553 [Cucumis melo] >XP_008449768.1 PREDICTED: uncharacterized protein LOC103491553 [Cucumis melo]) HSP 1 Score: 545.8 bits (1405), Expect = 1.2e-151 Identity = 295/332 (88.86%), Postives = 310/332 (93.37%), Query Frame = 0
BLAST of CsaV3_4G023710.1 vs. NCBI nr
Match: XP_023513003.1 (uncharacterized protein LOC111777577 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 543.9 bits (1400), Expect = 4.7e-151 Identity = 294/332 (88.55%), Postives = 309/332 (93.07%), Query Frame = 0
BLAST of CsaV3_4G023710.1 vs. NCBI nr
Match: XP_022944400.1 (uncharacterized protein LOC111448857 [Cucurbita moschata]) HSP 1 Score: 541.2 bits (1393), Expect = 3.1e-150 Identity = 294/332 (88.55%), Postives = 308/332 (92.77%), Query Frame = 0
BLAST of CsaV3_4G023710.1 vs. TAIR10
Match: AT5G19900.1 (PRLI-interacting factor, putative) HSP 1 Score: 310.1 bits (793), Expect = 2.1e-84 Identity = 192/341 (56.30%), Postives = 226/341 (66.28%), Query Frame = 0
BLAST of CsaV3_4G023710.1 vs. TrEMBL
Match: tr|A0A0A0KZ71|A0A0A0KZ71_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G286340 PE=4 SV=1) HSP 1 Score: 645.2 bits (1663), Expect = 1.0e-181 Identity = 410/410 (100.00%), Postives = 410/410 (100.00%), Query Frame = 0
BLAST of CsaV3_4G023710.1 vs. TrEMBL
Match: tr|A0A1S3BMS0|A0A1S3BMS0_CUCME (uncharacterized protein LOC103491551 OS=Cucumis melo OX=3656 GN=LOC103491551 PE=4 SV=1) HSP 1 Score: 627.9 bits (1618), Expect = 1.6e-176 Identity = 396/410 (96.59%), Postives = 402/410 (98.05%), Query Frame = 0
BLAST of CsaV3_4G023710.1 vs. TrEMBL
Match: tr|A0A1S3BM66|A0A1S3BM66_CUCME (uncharacterized protein LOC103491553 OS=Cucumis melo OX=3656 GN=LOC103491553 PE=4 SV=1) HSP 1 Score: 545.8 bits (1405), Expect = 8.2e-152 Identity = 295/332 (88.86%), Postives = 310/332 (93.37%), Query Frame = 0
BLAST of CsaV3_4G023710.1 vs. TrEMBL
Match: tr|A0A0A0L0I4|A0A0A0L0I4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G286320 PE=4 SV=1) HSP 1 Score: 536.6 bits (1381), Expect = 5.0e-149 Identity = 291/332 (87.65%), Postives = 308/332 (92.77%), Query Frame = 0
BLAST of CsaV3_4G023710.1 vs. TrEMBL
Match: tr|A0A0R0I148|A0A0R0I148_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100786460 PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 7.3e-100 Identity = 218/350 (62.29%), Postives = 254/350 (72.57%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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