CsaV3_4G023570.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G023570.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	E3 ubiquitin-protein ligase
Location	chr4 : 13721917 .. 13725508 (-)
Sequence length	981

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAGAACATGGGGGTGTGGTCCTTTTTCATAGCCAAAGTTTTGATGAGTTATGTCTCTTAAAATGGTCAGCTCCAATAATAACATCAACTAAGAACGTTTTCATTTTGGTAAAATGTTCTATAAGAGACTTATAGATGTAGCCTTTTAATGGATTTACAGATAGATTGATGAAGTATGAAGAAGAAAAAAGACAACAAGTTTTTGAACAGTGAAAGTTAAATTTGAAAAAGAGAGATAAAGTAGAGAGAGAGAGAGAGTTAATGCTATGAAATTTTGGAGACGTTGCGTGCGGGCAATGTCAGCTTCTTAGCCTCGGCCTTTGCAAAACCCAATACTGTGTTCTGTTCCCTTTTCCTAATAACGACGAGGTGCAGCGCAGCATTCCCTCATTTTGAAATGGATTTTTCATTTTCCATTTCAAAATGCTTTAACCCATTTCTTTAATTCAGCTCAACCAACAACAATCACACTCACCGGTCGATCCATTTTGAATGGGCTGCCAAGCTAAGCTCTACCATTTCTTTGACTCTTAACCCTTTTGTTGTTCCAATCTAAACCCGACACACGCCCATTCCTTCTTCTTTCTCTTTCCATTTCCTTTTGGGGCCAACCATTTCTGCAATTATTGGGTTGTTCAGCGGCGTTAACCTCATTTTTTCGCCATCTCCACCTTCCCCTGCTGTTTTCTGGTCGATCACTCTCGTACCCTTCAATTTTTTCCATCTGGGTATGTTGATTTCTTTGCTTACTGATGCTTTATGTTACTCTACTGTTGATTATTCAATTGGGTGTTCAAATTTTCTCTTGGCTTTTGTTTGATTTCGTAGTTCTTGTATATTTTCTTTCTATACATTGTTTATCACTGTGCTGCATTCTGGTTATGTTTATGCCTGTTCGATGATTTTGAAACGATGGTGAATTTGTCTGTTGTTTTTCTTTTTGATTCTTAACTGAAGTGGTTTGGATGAGAAAAATGCTGGCTTCTAGTTTTAAACAGAGATGATTTAATACTCGTTCTATTAATAGATTATAGGTTGTTTTCTTTTGGTTTTCTTGTATTTTACTTTTCTGTTTATAGATTCTTATCGCAGCACAGATGCCAAACTCAGTAAAGAGGAAAAGAGAAAGGAAAAAAAATTGGTGCTTCTGTTGGGTTTTGTTTTCTTGCTGCTTGTACTTGTGCCAATTAATGATATAGCTTTTATTTTCTCACTCTTAAACGCACTTTTTCTGTTGTGCAAGCAAACAATGATTCCATCCGATTGTAACTGTCATGTGTTGTTGTAAATTTTAATGCATACATGAGTTTTCAATTTAAAGAACGTTGAAGATTCTTCCTCGTAGCTTCCGTTTCCAACAGGTTCTGTTCTGTCTATGGTATGTTATTATAAAAGAAGGATTTAATGATCCAAAACTTAATTGATTTTACTTCTTGCGCATGCAATGCTTTCAAATTGCATCTTGCTTCTCATTGCTCTTGATTACTGGATGTGAAATTCATTTTGGTATGTAATAAATGCACACAGTTATTGTCCTTGATTTGTGATTTAGGAGATCCATGTTTTGAATGTTTTTTCTATTATTATCCTATTTGCATTGCACATTTGAAAATAAATATCATTGAGTGTGAAGTTTAAATGGAATCCACATAGCTGAAATGATCATCCTACTAAATTGATTGGTCCAGGGAACAAGTTTTGAGATGCTTGCTTATCATAAGTTTCTACGGAACCAATTATGAGTTCTTCAAACAAGTCCCTCTAGCAATGACACTTCTTCTTTTTTAATTAAATCTCAGAGATGATTGTATGAGTACCATAATAGAATTCAGAGAGAAGGGGATGTATCAGCAACCCAAGTCAAGGGAAGAACATGCTTCTTCTGCAGCCAGCTTCTGCAAAGAAGTGACCGAGTTGCGCCTTACATCGATAGATTCTCAACCAGCAACTTCTCGTCCTGAGTTCAAAGGTGTCACTTTCAGGAAAGCTTCAACTGGTGGCTTTGCTAGGAGTCGTAATGATGTACACGAGCTACTTGATTGTACTGTTTGCATGAATTTAATGCATCCTCCAATTTACCAGGTATCGTATTCTTATTGTGATGACTTTCAAAACATATAACGCTTTGCTCATTGATTATTCTGAAAAAAAAAACGTTTCATAGATAAATAAATTCATCCAATAAATAGAACACTGACGCATTTAATTTGGTTGAAGGCCTAGAACCCTAATGGATTATTGAGTCACTCTTTTGTCCCCGGAAATAGCTTTCGGACCAAGTATCAAAAGGACTCTATATAACTTCACTTTCTGTTCAAATGGAAGGCTAGGAATTTTGTTTAAGCGTTGATTTGCATTATGATTGAGTTATTACATTTGAGGTAACTCCAATGCATAACAGCTAACGTAATTTTACGGTTCAGTGTGCAAATGGCCACACTCTTTGTTCAAGCTGCAAGGCAAGGGTTCAGAATTGCTGCCCTACCTGTCGGCATGAGCTTGGGAACATAAGGTGCCTAGCACTGGAAAAGGTGGCCGAGTCCCTTGAGCTCCCTTGTGTGTACCAAAACCTAGGTTGCATTGACATGTTCCCATACTACAGCAAGCTTAAACACGAGAAGAATTGTAAATACCGGCCGTACAACTGCCCTTACGCTGGAGGTGAATGTCATGTAACTGGTGACATTCCATCCCTTGTCATGCATCTCAAGGATGATCACGAGGTGGATATGCATGATGGATGTTCCTTCAGTCATAGATATGTCAAATCCAATCCCCAAGAAGTTGAAAATGCCACATGGATGCTAACTGTAAGATGTCTCTCTTTATTTCAGATTCTTAGGAATAATGAAAGCAAAGAAGAAGCAATTCCATGTAATGAACATCCTCCTGATTTCTCAATTGATCCAATTCAGGTTTTCAACTGCTTTGGACGACAATTCTGTTTGCACTTTGAAGCATTTCGCCTAGGAACAGCACCTGTTTACATGGCATTCCTCCGGTTCATGGGTGACGACAGCGAGGCAAAACAGTTCTCATACAGTCTTGAAGTTGGTGGAAATGGAAGAAAACTCATCTGGCAAGGTATTCCAAGAAGTATTCGCGACAGCCATCGGAAGGTTCGAGACAGTCATGATGGACTAATTATTCAGAGGAAATTGGCATTATTTTGCTCTGGAAACGAGGGGATGGAACTGAAGTTAAAGGTTACAGGACGAATATGGAGAGTGAGGTGACAACAACAAATGAATATTCATCTATCAAACTCAAAACTTGTACAATATGTTGTGACATTGTGACCTTTGTACATGCCTCGGCCCTCCTACAATTCAGCCTTTTTTTAGAACCTCTTATTTCTTCATCACCTCTACATTTTCTGCTTCATTTTCTTTTCTCTATAGTTTATTTATTTTTATCTAATTATTAAAATAGAATGATAGAAATAAAACTAACAAGAATGCCAACCCATTTTCATAGTAATGCAATGCTAAATGTAAAACAACTCAGCATATTATGCATAGAACTTAGAAGAATACAAAAAGGTGTTGGACAACTTTAACAGTTAAGGCTATTGAAGTTTTTACCTTTTTG

mRNA sequence

ATGAGTACCATAATAGAATTCAGAGAGAAGGGGATGTATCAGCAACCCAAGTCAAGGGAAGAACATGCTTCTTCTGCAGCCAGCTTCTGCAAAGAAGTGACCGAGTTGCGCCTTACATCGATAGATTCTCAACCAGCAACTTCTCGTCCTGAGTTCAAAGGTGTCACTTTCAGGAAAGCTTCAACTGGTGGCTTTGCTAGGAGTCGTAATGATGTACACGAGCTACTTGATTGTACTGTTTGCATGAATTTAATGCATCCTCCAATTTACCAGTGTGCAAATGGCCACACTCTTTGTTCAAGCTGCAAGGCAAGGGTTCAGAATTGCTGCCCTACCTGTCGGCATGAGCTTGGGAACATAAGGTGCCTAGCACTGGAAAAGGTGGCCGAGTCCCTTGAGCTCCCTTGTGTGTACCAAAACCTAGGTTGCATTGACATGTTCCCATACTACAGCAAGCTTAAACACGAGAAGAATTGTAAATACCGGCCGTACAACTGCCCTTACGCTGGAGGTGAATGTCATGTAACTGGTGACATTCCATCCCTTGTCATGCATCTCAAGGATGATCACGAGGTGGATATGCATGATGGATGTTCCTTCAGTCATAGATATGTCAAATCCAATCCCCAAGAAGTTGAAAATGCCACATGGATGCTAACTGTTTTCAACTGCTTTGGACGACAATTCTGTTTGCACTTTGAAGCATTTCGCCTAGGAACAGCACCTGTTTACATGGCATTCCTCCGGTTCATGGGTGACGACAGCGAGGCAAAACAGTTCTCATACAGTCTTGAAGTTGGTGGAAATGGAAGAAAACTCATCTGGCAAGGTATTCCAAGAAGTATTCGCGACAGCCATCGGAAGGTTCGAGACAGTCATGATGGACTAATTATTCAGAGGAAATTGGCATTATTTTGCTCTGGAAACGAGGGGATGGAACTGAAGTTAAAGGTTACAGGACGAATATGGAGAGTGAGGTGA

Coding sequence (CDS)

ATGAGTACCATAATAGAATTCAGAGAGAAGGGGATGTATCAGCAACCCAAGTCAAGGGAAGAACATGCTTCTTCTGCAGCCAGCTTCTGCAAAGAAGTGACCGAGTTGCGCCTTACATCGATAGATTCTCAACCAGCAACTTCTCGTCCTGAGTTCAAAGGTGTCACTTTCAGGAAAGCTTCAACTGGTGGCTTTGCTAGGAGTCGTAATGATGTACACGAGCTACTTGATTGTACTGTTTGCATGAATTTAATGCATCCTCCAATTTACCAGTGTGCAAATGGCCACACTCTTTGTTCAAGCTGCAAGGCAAGGGTTCAGAATTGCTGCCCTACCTGTCGGCATGAGCTTGGGAACATAAGGTGCCTAGCACTGGAAAAGGTGGCCGAGTCCCTTGAGCTCCCTTGTGTGTACCAAAACCTAGGTTGCATTGACATGTTCCCATACTACAGCAAGCTTAAACACGAGAAGAATTGTAAATACCGGCCGTACAACTGCCCTTACGCTGGAGGTGAATGTCATGTAACTGGTGACATTCCATCCCTTGTCATGCATCTCAAGGATGATCACGAGGTGGATATGCATGATGGATGTTCCTTCAGTCATAGATATGTCAAATCCAATCCCCAAGAAGTTGAAAATGCCACATGGATGCTAACTGTTTTCAACTGCTTTGGACGACAATTCTGTTTGCACTTTGAAGCATTTCGCCTAGGAACAGCACCTGTTTACATGGCATTCCTCCGGTTCATGGGTGACGACAGCGAGGCAAAACAGTTCTCATACAGTCTTGAAGTTGGTGGAAATGGAAGAAAACTCATCTGGCAAGGTATTCCAAGAAGTATTCGCGACAGCCATCGGAAGGTTCGAGACAGTCATGATGGACTAATTATTCAGAGGAAATTGGCATTATTTTGCTCTGGAAACGAGGGGATGGAACTGAAGTTAAAGGTTACAGGACGAATATGGAGAGTGAGGTGA

Protein sequence

MSTIIEFREKGMYQQPKSREEHASSAASFCKEVTELRLTSIDSQPATSRPEFKGVTFRKASTGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEGMELKLKVTGRIWRVR

Homology

[Close]

BLAST of CsaV3_4G023570.1 vs. NCBI nr
Match: KGN54095.1 (hypothetical protein Csa_4G285710 [Cucumis sativus])

HSP 1 Score: 696.8 bits (1797), Expect = 3.5e-197
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0


Query: 1   MSTIIEFREKGMYQQPKSREEHASSAASFCKEVTELRLTSIDSQPATSRPEFKGVTFRKA 60
           MSTIIEFREKGMYQQPKSREEHASSAASFCKEVTELRLTSIDSQPATSRPEFKGVTFRKA
Sbjct: 1   MSTIIEFREKGMYQQPKSREEHASSAASFCKEVTELRLTSIDSQPATSRPEFKGVTFRKA 60

Query: 61  STGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNI 120
           STGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNI
Sbjct: 61  STGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNI 120

Query: 121 RCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIP 180
           RCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIP
Sbjct: 121 RCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIP 180

Query: 181 SLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGT 240
           SLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGT
Sbjct: 181 SLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGT 240

Query: 241 APVYMAFLRFMGDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQR 300
           APVYMAFLRFMGDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQR
Sbjct: 241 APVYMAFLRFMGDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQR 300

Query: 301 KLALFCSGNEGMELKLKVTGRIWRVR 327
           KLALFCSGNEGMELKLKVTGRIWRVR
Sbjct: 301 KLALFCSGNEGMELKLKVTGRIWRVR 326

[Close]

BLAST of CsaV3_4G023570.1 vs. NCBI nr
Match: XP_008449780.1 (PREDICTED: E3 ubiquitin-protein ligase SINAT2 [Cucumis melo])

HSP 1 Score: 690.6 bits (1781), Expect = 2.5e-195
Identity = 323/326 (99.08%), Postives = 324/326 (99.39%), Query Frame = 0


Query: 1   MSTIIEFREKGMYQQPKSREEHASSAASFCKEVTELRLTSIDSQPATSRPEFKGVTFRKA 60
           MSTIIEFREKGMYQQ KSREEHASSAASFCKEVTEL LTSIDSQPATSRPEFKGVTFRKA
Sbjct: 1   MSTIIEFREKGMYQQQKSREEHASSAASFCKEVTELHLTSIDSQPATSRPEFKGVTFRKA 60

Query: 61  STGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNI 120
           STGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNI
Sbjct: 61  STGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNI 120

Query: 121 RCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIP 180
           RCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIP
Sbjct: 121 RCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIP 180

Query: 181 SLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGT 240
           SLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGT
Sbjct: 181 SLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGT 240

Query: 241 APVYMAFLRFMGDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQR 300
           APVYMAFLRFMGDD+EAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQR
Sbjct: 241 APVYMAFLRFMGDDNEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQR 300

Query: 301 KLALFCSGNEGMELKLKVTGRIWRVR 327
           KLALFCSGNEGMELKLKVTGRIWRVR
Sbjct: 301 KLALFCSGNEGMELKLKVTGRIWRVR 326

[Close]

BLAST of CsaV3_4G023570.1 vs. NCBI nr
Match: XP_022153850.1 (putative E3 ubiquitin-protein ligase SINAT1 [Momordica charantia] >XP_022153851.1 putative E3 ubiquitin-protein ligase SINAT1 [Momordica charantia])

HSP 1 Score: 609.4 bits (1570), Expect = 7.3e-171
Identity = 286/325 (88.00%), Postives = 300/325 (92.31%), Query Frame = 0


Query: 3   TIIEFREKGMYQQPKSREEH-ASSAASFCKEVTELRLTSIDSQPATSRPEFKGVTFRKAS 62
           +I+EFREK MYQQ K REEH +SS ASFCKEVTELRLTSIDSQ ATSRPEFK V+ RK+S
Sbjct: 2   SIVEFREKEMYQQKKLREEHTSSSGASFCKEVTELRLTSIDSQAATSRPEFKSVSSRKSS 61

Query: 63  TGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIR 122
           T GF R+ N+VHELLDCTVCM+LMHPPIYQCANGHTLCSSCK+RV NCCPTCRHELGNIR
Sbjct: 62  T-GFGRNCNNVHELLDCTVCMDLMHPPIYQCANGHTLCSSCKSRVHNCCPTCRHELGNIR 121

Query: 123 CLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPS 182
           CL LEKVAESLELPCVYQNLGCID  PYYSKLKHEKNCKYRPYNCPYAGGEC VTGDIP 
Sbjct: 122 CLVLEKVAESLELPCVYQNLGCIDTLPYYSKLKHEKNCKYRPYNCPYAGGECSVTGDIPY 181

Query: 183 LVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTA 242
           LVMHLKDDHEVDMH+GCSFSHRYVKSNP+EVENATWMLTVFNCFGRQFCLHFEAFRLGTA
Sbjct: 182 LVMHLKDDHEVDMHEGCSFSHRYVKSNPREVENATWMLTVFNCFGRQFCLHFEAFRLGTA 241

Query: 243 PVYMAFLRFMGDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRK 302
           PVYMAFLRFMGDD +AK+FSYSLEVGGNGRKL+WQG PRSIRDSHRKVRDS DGLII R 
Sbjct: 242 PVYMAFLRFMGDDDDAKKFSYSLEVGGNGRKLMWQGTPRSIRDSHRKVRDSQDGLIIHRN 301

Query: 303 LALFCSGNEGMELKLKVTGRIWRVR 327
           LALFCSGN G ELKLKV GRIWRVR
Sbjct: 302 LALFCSGNHGQELKLKVVGRIWRVR 325

[Close]

BLAST of CsaV3_4G023570.1 vs. NCBI nr
Match: OMO59923.1 (Seven-in-absentia protein, sina [Corchorus olitorius])

HSP 1 Score: 501.5 bits (1290), Expect = 2.1e-138
Identity = 232/299 (77.59%), Postives = 254/299 (84.95%), Query Frame = 0


Query: 30  CKEVTELRLTSIDSQPATSRPEFKGVTFRKASTG----GFARSRNDVHELLDCTVCMNLM 89
           CK+V E R+   D   ATS  E +G   RKA+TG      A S NDVHELL+C VC+NLM
Sbjct: 8   CKDVIESRIAFADYDMATSSAELRGSPLRKAATGLGGTFGAASTNDVHELLECPVCINLM 67

Query: 90  HPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAESLELPCVYQNLGCID 149
           +PPIYQC NGHT+CS CKARV N CPTCR+ELGNIRCLALEKVAESLELPC YQ LGC D
Sbjct: 68  YPPIYQCPNGHTVCSICKARVHNSCPTCRNELGNIRCLALEKVAESLELPCKYQILGCHD 127

Query: 150 MFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHEVDMHDGCSFSHRYV 209
           +FPYYSKLKHEKNC+YRPYNCPYAG EC VTGDIP LVMHLK+DH+VDMHDGC+F+HRYV
Sbjct: 128 IFPYYSKLKHEKNCRYRPYNCPYAGAECSVTGDIPFLVMHLKNDHKVDMHDGCTFNHRYV 187

Query: 210 KSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDSEAKQFSYSLE 269
           KSNP EVENATWMLTVFNCFGRQFCLHFEAF +G APVYMAFLRFMGD+ EA+QFSYSLE
Sbjct: 188 KSNPHEVENATWMLTVFNCFGRQFCLHFEAFHIGMAPVYMAFLRFMGDEDEARQFSYSLE 247

Query: 270 VGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEGMELKLKVTGRIWR 325
           VGGNGRK +WQG+PRSIRDSHRKVRDS DGLIIQR LALF SG +  ELKLKV GRIW+
Sbjct: 248 VGGNGRKFMWQGVPRSIRDSHRKVRDSQDGLIIQRNLALFFSGGDRQELKLKVAGRIWK 306

[Close]

BLAST of CsaV3_4G023570.1 vs. NCBI nr
Match: OMO75674.1 (Seven-in-absentia protein, sina [Corchorus capsularis])

HSP 1 Score: 501.1 bits (1289), Expect = 2.8e-138
Identity = 232/299 (77.59%), Postives = 254/299 (84.95%), Query Frame = 0


Query: 30  CKEVTELRLTSIDSQPATSRPEFKGVTFRKASTG----GFARSRNDVHELLDCTVCMNLM 89
           CK+V E R+   D   ATS  E +G   RKA+TG      A S NDVHELL+C VC+NLM
Sbjct: 8   CKDVIESRIAFADYDMATSSAELRGSPLRKAATGLGGTFGAASTNDVHELLECPVCINLM 67

Query: 90  HPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAESLELPCVYQNLGCID 149
           +PPIYQC NGHT+CS CKARV N CPTCR+ELGNIRCLALEKVAESLELPC YQ LGC D
Sbjct: 68  YPPIYQCPNGHTVCSICKARVHNSCPTCRNELGNIRCLALEKVAESLELPCRYQILGCHD 127

Query: 150 MFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHEVDMHDGCSFSHRYV 209
           +FPYYSKLKHEKNC+YRPYNCPYAG EC VTGDIP LVMHLK+DH+VDMHDGC+F+HRYV
Sbjct: 128 IFPYYSKLKHEKNCRYRPYNCPYAGAECSVTGDIPFLVMHLKNDHKVDMHDGCTFNHRYV 187

Query: 210 KSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDSEAKQFSYSLE 269
           KSNP EVENATWMLTVFNCFGRQFCLHFEAF +G APVYMAFLRFMGD+ EA+QFSYSLE
Sbjct: 188 KSNPHEVENATWMLTVFNCFGRQFCLHFEAFHIGMAPVYMAFLRFMGDEDEARQFSYSLE 247

Query: 270 VGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEGMELKLKVTGRIWR 325
           VGGNGRK +WQG+PRSIRDSHRKVRDS DGLIIQR LALF SG +  ELKLKV GRIW+
Sbjct: 248 VGGNGRKFMWQGVPRSIRDSHRKVRDSQDGLIIQRNLALFFSGGDRQELKLKVAGRIWK 306

[Close]

BLAST of CsaV3_4G023570.1 vs. TAIR10
Match: AT3G58040.1 (seven in absentia of Arabidopsis 2)

HSP 1 Score: 475.3 bits (1222), Expect = 3.0e-134
Identity = 219/301 (72.76%), Postives = 251/301 (83.39%), Query Frame = 0


Query: 28  SFCKEVTELRLTSIDSQPATSRPEFKGVTFRKASTGGFAR----SRNDVHELLDCTVCMN 87
           S  KEV E   T +D +  T++ E       K  + G  +    S N V+ELL+C VC N
Sbjct: 6   SALKEVMESNSTGMDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLECPVCTN 65

Query: 88  LMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAESLELPCVYQNLGC 147
           LM+PPI+QC NGHTLCS+CK RVQN CPTCR+ELGNIRCLALEKVAESLE+PC YQNLGC
Sbjct: 66  LMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGC 125

Query: 148 IDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHEVDMHDGCSFSHR 207
            D+FPYYSKLKHE++C++RPY CPYAG EC VTGDIP+LV+HLKDDH+VDMHDGC+F+HR
Sbjct: 126 HDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHR 185

Query: 208 YVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDSEAKQFSYS 267
           YVKSNP EVENATWMLTVFNCFGRQFCLHFEAF+LG APVYMAFLRFMGD++EAK+FSYS
Sbjct: 186 YVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYS 245

Query: 268 LEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEGMELKLKVTGRIW 325
           LEVG +GRKL WQGIPRSIRDSHRKVRDS DGLII R LAL+ SG +  ELKL+VTGRIW
Sbjct: 246 LEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIW 305

[Close]

BLAST of CsaV3_4G023570.1 vs. TAIR10
Match: AT2G41980.1 (Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 465.3 bits (1196), Expect = 3.1e-131
Identity = 216/298 (72.48%), Postives = 247/298 (82.89%), Query Frame = 0


Query: 28  SFCKEVTELRLTSIDSQPATSRPEFKGVTFRKASTG-GFARSRNDVHELLDCTVCMNLMH 87
           S  KE  E   T +D +   ++ E      +  S   G   S N V+ELL+C VC NLM+
Sbjct: 6   SALKEALESNSTGVDYEVKMAKVEANSKPTKSGSGSIGKFHSSNGVYELLECPVCTNLMY 65

Query: 88  PPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAESLELPCVYQNLGCIDM 147
           PPI+QC NGHTLCSSCK RVQN CPTCR+ELGNIRCLALEKVAESLE+PC YQNLGC D+
Sbjct: 66  PPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCQDI 125

Query: 148 FPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHEVDMHDGCSFSHRYVK 207
           FPYYSKLKHE++C++R Y+CPYAG EC VTGDIP+LV HLKDDH+VDMHDGC+F+HRYVK
Sbjct: 126 FPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHKVDMHDGCTFNHRYVK 185

Query: 208 SNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDSEAKQFSYSLEV 267
           SNP EVENATWMLTVFNCFGRQFCLHFEAF+LG APVYMAFLRFMGD++EAK+FSYSLEV
Sbjct: 186 SNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEV 245

Query: 268 GGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEGMELKLKVTGRIWR 325
           G + RKL WQGIPRSIRDSHRKVRDS DGLII R LAL+ SG++  ELKL+VTGRIW+
Sbjct: 246 GAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGSDKEELKLRVTGRIWK 303

[Close]

BLAST of CsaV3_4G023570.1 vs. TAIR10
Match: AT3G61790.1 (Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 441.4 bits (1134), Expect = 4.8e-124
Identity = 195/253 (77.08%), Postives = 225/253 (88.93%), Query Frame = 0


Query: 72  VHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAES 131
           VHELL+C VC N M+PPI+QC NGHTLCS+CKARV N CPTCR ELG+IRCLALEKVAES
Sbjct: 57  VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAES 116

Query: 132 LELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHE 191
           LELPC + +LGC ++FPYYSKLKHE  C +RPY+CPYAG EC VTGDIP LV HL+DDH+
Sbjct: 117 LELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHK 176

Query: 192 VDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 251
           VDMH GC+F+HRYVKSNP+EVENATWMLTVF+CFG+ FCLHFEAF+LG APVYMAFLRFM
Sbjct: 177 VDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFM 236

Query: 252 GDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEG 311
           GD++EA+ ++YSLEVGG GRKLIW+G PRS+RDSHRKVRDSHDGLIIQR +ALF SG + 
Sbjct: 237 GDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDR 296

Query: 312 MELKLKVTGRIWR 325
            ELKL+VTGRIW+
Sbjct: 297 KELKLRVTGRIWK 309

[Close]

BLAST of CsaV3_4G023570.1 vs. TAIR10
Match: AT4G27880.1 (Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 423.3 bits (1087), Expect = 1.3e-118
Identity = 187/253 (73.91%), Postives = 219/253 (86.56%), Query Frame = 0


Query: 72  VHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAES 131
           V+ELL+C VC   M+PPI+QC NGHTLCS+CK RV N CPTCR ELG+IRCLALEKVAES
Sbjct: 58  VYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAES 117

Query: 132 LELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHE 191
           LELPC + NLGC ++FPYYSKLKHE  C +RPY+CPYAG EC + GDIP LV HL+DDH+
Sbjct: 118 LELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHK 177

Query: 192 VDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 251
           VDMH G +F+HRYVKSNP+EVENATWMLTVF+CFG+ FCLHFEAF+LG  PVYMAFLRFM
Sbjct: 178 VDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFM 237

Query: 252 GDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEG 311
           GD+ +A+ +SYSLEVGG+GRKL W+G PRSIRDSHRKVRDS+DGLIIQR +ALF SG + 
Sbjct: 238 GDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDR 297

Query: 312 MELKLKVTGRIWR 325
            ELKL+VTG+IW+
Sbjct: 298 KELKLRVTGKIWK 310

[Close]

BLAST of CsaV3_4G023570.1 vs. TAIR10
Match: AT5G53360.1 (TRAF-like superfamily protein)

HSP 1 Score: 328.2 bits (840), Expect = 5.9e-90
Identity = 144/202 (71.29%), Postives = 168/202 (83.17%), Query Frame = 0


Query: 123 LALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSL 182
           +ALEKVAESLELPC Y NLGC+ +FPYYSKLKHE  C +RPY+CPYAG EC   GDI  L
Sbjct: 15  IALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFL 74

Query: 183 VMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAP 242
           V HL+DDH+VDMH GC+F+HRYVKSNP+EVENATWMLTVF CFG+ FCLHFEAF+LG AP
Sbjct: 75  VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAP 134

Query: 243 VYMAFLRFMGDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKL 302
           VYMAFLRFMGD+ +A+ ++YSLEVGG+GRK  W+G PRS+RDSH       DGLIIQR +
Sbjct: 135 VYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHXXXXXXXDGLIIQRNM 194

Query: 303 ALFCSGNEGMELKLKVTGRIWR 325
           ALF SG +  ELKL+VTGRIW+
Sbjct: 195 ALFFSGGDKKELKLRVTGRIWK 216

[Close]

BLAST of CsaV3_4G023570.1 vs. Swiss-Prot
Match: sp|Q9M2P4|SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana OX=3702 GN=SINAT2 PE=1 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 5.4e-133
Identity = 219/301 (72.76%), Postives = 251/301 (83.39%), Query Frame = 0


Query: 28  SFCKEVTELRLTSIDSQPATSRPEFKGVTFRKASTGGFAR----SRNDVHELLDCTVCMN 87
           S  KEV E   T +D +  T++ E       K  + G  +    S N V+ELL+C VC N
Sbjct: 6   SALKEVMESNSTGMDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLECPVCTN 65

Query: 88  LMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAESLELPCVYQNLGC 147
           LM+PPI+QC NGHTLCS+CK RVQN CPTCR+ELGNIRCLALEKVAESLE+PC YQNLGC
Sbjct: 66  LMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGC 125

Query: 148 IDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHEVDMHDGCSFSHR 207
            D+FPYYSKLKHE++C++RPY CPYAG EC VTGDIP+LV+HLKDDH+VDMHDGC+F+HR
Sbjct: 126 HDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHR 185

Query: 208 YVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDSEAKQFSYS 267
           YVKSNP EVENATWMLTVFNCFGRQFCLHFEAF+LG APVYMAFLRFMGD++EAK+FSYS
Sbjct: 186 YVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYS 245

Query: 268 LEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEGMELKLKVTGRIW 325
           LEVG +GRKL WQGIPRSIRDSHRKVRDS DGLII R LAL+ SG +  ELKL+VTGRIW
Sbjct: 246 LEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIW 305

[Close]

BLAST of CsaV3_4G023570.1 vs. Swiss-Prot
Match: sp|P93748|SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana OX=3702 GN=SINAT1 PE=1 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 5.6e-130
Identity = 216/298 (72.48%), Postives = 247/298 (82.89%), Query Frame = 0


Query: 28  SFCKEVTELRLTSIDSQPATSRPEFKGVTFRKASTG-GFARSRNDVHELLDCTVCMNLMH 87
           S  KE  E   T +D +   ++ E      +  S   G   S N V+ELL+C VC NLM+
Sbjct: 6   SALKEALESNSTGVDYEVKMAKVEANSKPTKSGSGSIGKFHSSNGVYELLECPVCTNLMY 65

Query: 88  PPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAESLELPCVYQNLGCIDM 147
           PPI+QC NGHTLCSSCK RVQN CPTCR+ELGNIRCLALEKVAESLE+PC YQNLGC D+
Sbjct: 66  PPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCQDI 125

Query: 148 FPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHEVDMHDGCSFSHRYVK 207
           FPYYSKLKHE++C++R Y+CPYAG EC VTGDIP+LV HLKDDH+VDMHDGC+F+HRYVK
Sbjct: 126 FPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHKVDMHDGCTFNHRYVK 185

Query: 208 SNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDSEAKQFSYSLEV 267
           SNP EVENATWMLTVFNCFGRQFCLHFEAF+LG APVYMAFLRFMGD++EAK+FSYSLEV
Sbjct: 186 SNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEV 245

Query: 268 GGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEGMELKLKVTGRIWR 325
           G + RKL WQGIPRSIRDSHRKVRDS DGLII R LAL+ SG++  ELKL+VTGRIW+
Sbjct: 246 GAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGSDKEELKLRVTGRIWK 303

[Close]

BLAST of CsaV3_4G023570.1 vs. Swiss-Prot
Match: sp|Q10L91|DIS1_ORYSJ (E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS1 PE=1 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.2e-124
Identity = 197/255 (77.25%), Postives = 224/255 (87.84%), Query Frame = 0


Query: 70  NDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVA 129
           + V ELL+C VC++ M+PPI+QC+NGHTLCS CK RV N CPTCRHELGNIRCLALEKVA
Sbjct: 45  SSVRELLECPVCLSAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVA 104

Query: 130 ESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDD 189
            SLELPC YQN GC+ ++PYY KLKHE  C+YRPY+CPYAG EC V GDIP LV HLKDD
Sbjct: 105 ASLELPCKYQNFGCVGIYPYYCKLKHESQCQYRPYSCPYAGSECTVAGDIPYLVNHLKDD 164

Query: 190 HEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLR 249
           H+VDMH+GC+F+HRYVKSNP EVENATWMLTVF+CFG+ FCLHFEAF+LG APVY+AFLR
Sbjct: 165 HKVDMHNGCTFNHRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLR 224

Query: 250 FMGDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGN 309
           FMGDD EAK +SYSLEVGG GRK+IWQG+PRSIRDSHRKVRDS+DGLIIQR +ALF SG 
Sbjct: 225 FMGDDLEAKNYSYSLEVGGTGRKMIWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGG 284

Query: 310 EGMELKLKVTGRIWR 325
           E  ELKL+VTGRIW+
Sbjct: 285 ERKELKLRVTGRIWK 299

[Close]

BLAST of CsaV3_4G023570.1 vs. Swiss-Prot
Match: sp|Q84JL3|SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=1 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 8.6e-123
Identity = 195/253 (77.08%), Postives = 225/253 (88.93%), Query Frame = 0


Query: 72  VHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAES 131
           VHELL+C VC N M+PPI+QC NGHTLCS+CKARV N CPTCR ELG+IRCLALEKVAES
Sbjct: 57  VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAES 116

Query: 132 LELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHE 191
           LELPC + +LGC ++FPYYSKLKHE  C +RPY+CPYAG EC VTGDIP LV HL+DDH+
Sbjct: 117 LELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHK 176

Query: 192 VDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 251
           VDMH GC+F+HRYVKSNP+EVENATWMLTVF+CFG+ FCLHFEAF+LG APVYMAFLRFM
Sbjct: 177 VDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFM 236

Query: 252 GDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEG 311
           GD++EA+ ++YSLEVGG GRKLIW+G PRS+RDSHRKVRDSHDGLIIQR +ALF SG + 
Sbjct: 237 GDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDR 296

Query: 312 MELKLKVTGRIWR 325
            ELKL+VTGRIW+
Sbjct: 297 KELKLRVTGRIWK 309

[Close]

BLAST of CsaV3_4G023570.1 vs. Swiss-Prot
Match: sp|Q9STN8|SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana OX=3702 GN=SINAT4 PE=1 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 2.4e-117
Identity = 187/253 (73.91%), Postives = 219/253 (86.56%), Query Frame = 0


Query: 72  VHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAES 131
           V+ELL+C VC   M+PPI+QC NGHTLCS+CK RV N CPTCR ELG+IRCLALEKVAES
Sbjct: 58  VYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAES 117

Query: 132 LELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHE 191
           LELPC + NLGC ++FPYYSKLKHE  C +RPY+CPYAG EC + GDIP LV HL+DDH+
Sbjct: 118 LELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHK 177

Query: 192 VDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 251
           VDMH G +F+HRYVKSNP+EVENATWMLTVF+CFG+ FCLHFEAF+LG  PVYMAFLRFM
Sbjct: 178 VDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFM 237

Query: 252 GDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEG 311
           GD+ +A+ +SYSLEVGG+GRKL W+G PRSIRDSHRKVRDS+DGLIIQR +ALF SG + 
Sbjct: 238 GDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDR 297

Query: 312 MELKLKVTGRIWR 325
            ELKL+VTG+IW+
Sbjct: 298 KELKLRVTGKIWK 310

[Close]

BLAST of CsaV3_4G023570.1 vs. TrEMBL
Match: tr|A0A0A0KWV9|A0A0A0KWV9_CUCSA (E3 ubiquitin-protein ligase OS=Cucumis sativus OX=3659 GN=Csa_4G285710 PE=3 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 2.3e-197
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0


Query: 1   MSTIIEFREKGMYQQPKSREEHASSAASFCKEVTELRLTSIDSQPATSRPEFKGVTFRKA 60
           MSTIIEFREKGMYQQPKSREEHASSAASFCKEVTELRLTSIDSQPATSRPEFKGVTFRKA
Sbjct: 1   MSTIIEFREKGMYQQPKSREEHASSAASFCKEVTELRLTSIDSQPATSRPEFKGVTFRKA 60

Query: 61  STGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNI 120
           STGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNI
Sbjct: 61  STGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNI 120

Query: 121 RCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIP 180
           RCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIP
Sbjct: 121 RCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIP 180

Query: 181 SLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGT 240
           SLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGT
Sbjct: 181 SLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGT 240

Query: 241 APVYMAFLRFMGDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQR 300
           APVYMAFLRFMGDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQR
Sbjct: 241 APVYMAFLRFMGDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQR 300

Query: 301 KLALFCSGNEGMELKLKVTGRIWRVR 327
           KLALFCSGNEGMELKLKVTGRIWRVR
Sbjct: 301 KLALFCSGNEGMELKLKVTGRIWRVR 326

[Close]

BLAST of CsaV3_4G023570.1 vs. TrEMBL
Match: tr|A0A1S3BMT4|A0A1S3BMT4_CUCME (E3 ubiquitin-protein ligase OS=Cucumis melo OX=3656 GN=LOC103491565 PE=3 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 1.6e-195
Identity = 323/326 (99.08%), Postives = 324/326 (99.39%), Query Frame = 0


Query: 1   MSTIIEFREKGMYQQPKSREEHASSAASFCKEVTELRLTSIDSQPATSRPEFKGVTFRKA 60
           MSTIIEFREKGMYQQ KSREEHASSAASFCKEVTEL LTSIDSQPATSRPEFKGVTFRKA
Sbjct: 1   MSTIIEFREKGMYQQQKSREEHASSAASFCKEVTELHLTSIDSQPATSRPEFKGVTFRKA 60

Query: 61  STGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNI 120
           STGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNI
Sbjct: 61  STGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNI 120

Query: 121 RCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIP 180
           RCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIP
Sbjct: 121 RCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIP 180

Query: 181 SLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGT 240
           SLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGT
Sbjct: 181 SLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGT 240

Query: 241 APVYMAFLRFMGDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQR 300
           APVYMAFLRFMGDD+EAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQR
Sbjct: 241 APVYMAFLRFMGDDNEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQR 300

Query: 301 KLALFCSGNEGMELKLKVTGRIWRVR 327
           KLALFCSGNEGMELKLKVTGRIWRVR
Sbjct: 301 KLALFCSGNEGMELKLKVTGRIWRVR 326

[Close]

BLAST of CsaV3_4G023570.1 vs. TrEMBL
Match: tr|A0A1R3GPA5|A0A1R3GPA5_9ROSI (E3 ubiquitin-protein ligase OS=Corchorus olitorius OX=93759 GN=COLO4_34000 PE=3 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 1.4e-138
Identity = 232/299 (77.59%), Postives = 254/299 (84.95%), Query Frame = 0


Query: 30  CKEVTELRLTSIDSQPATSRPEFKGVTFRKASTG----GFARSRNDVHELLDCTVCMNLM 89
           CK+V E R+   D   ATS  E +G   RKA+TG      A S NDVHELL+C VC+NLM
Sbjct: 8   CKDVIESRIAFADYDMATSSAELRGSPLRKAATGLGGTFGAASTNDVHELLECPVCINLM 67

Query: 90  HPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAESLELPCVYQNLGCID 149
           +PPIYQC NGHT+CS CKARV N CPTCR+ELGNIRCLALEKVAESLELPC YQ LGC D
Sbjct: 68  YPPIYQCPNGHTVCSICKARVHNSCPTCRNELGNIRCLALEKVAESLELPCKYQILGCHD 127

Query: 150 MFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHEVDMHDGCSFSHRYV 209
           +FPYYSKLKHEKNC+YRPYNCPYAG EC VTGDIP LVMHLK+DH+VDMHDGC+F+HRYV
Sbjct: 128 IFPYYSKLKHEKNCRYRPYNCPYAGAECSVTGDIPFLVMHLKNDHKVDMHDGCTFNHRYV 187

Query: 210 KSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDSEAKQFSYSLE 269
           KSNP EVENATWMLTVFNCFGRQFCLHFEAF +G APVYMAFLRFMGD+ EA+QFSYSLE
Sbjct: 188 KSNPHEVENATWMLTVFNCFGRQFCLHFEAFHIGMAPVYMAFLRFMGDEDEARQFSYSLE 247

Query: 270 VGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEGMELKLKVTGRIWR 325
           VGGNGRK +WQG+PRSIRDSHRKVRDS DGLIIQR LALF SG +  ELKLKV GRIW+
Sbjct: 248 VGGNGRKFMWQGVPRSIRDSHRKVRDSQDGLIIQRNLALFFSGGDRQELKLKVAGRIWK 306

[Close]

BLAST of CsaV3_4G023570.1 vs. TrEMBL
Match: tr|A0A1R3HZB3|A0A1R3HZB3_COCAP (E3 ubiquitin-protein ligase OS=Corchorus capsularis OX=210143 GN=CCACVL1_16097 PE=3 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 1.8e-138
Identity = 232/299 (77.59%), Postives = 254/299 (84.95%), Query Frame = 0


Query: 30  CKEVTELRLTSIDSQPATSRPEFKGVTFRKASTG----GFARSRNDVHELLDCTVCMNLM 89
           CK+V E R+   D   ATS  E +G   RKA+TG      A S NDVHELL+C VC+NLM
Sbjct: 8   CKDVIESRIAFADYDMATSSAELRGSPLRKAATGLGGTFGAASTNDVHELLECPVCINLM 67

Query: 90  HPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAESLELPCVYQNLGCID 149
           +PPIYQC NGHT+CS CKARV N CPTCR+ELGNIRCLALEKVAESLELPC YQ LGC D
Sbjct: 68  YPPIYQCPNGHTVCSICKARVHNSCPTCRNELGNIRCLALEKVAESLELPCRYQILGCHD 127

Query: 150 MFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHEVDMHDGCSFSHRYV 209
           +FPYYSKLKHEKNC+YRPYNCPYAG EC VTGDIP LVMHLK+DH+VDMHDGC+F+HRYV
Sbjct: 128 IFPYYSKLKHEKNCRYRPYNCPYAGAECSVTGDIPFLVMHLKNDHKVDMHDGCTFNHRYV 187

Query: 210 KSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDSEAKQFSYSLE 269
           KSNP EVENATWMLTVFNCFGRQFCLHFEAF +G APVYMAFLRFMGD+ EA+QFSYSLE
Sbjct: 188 KSNPHEVENATWMLTVFNCFGRQFCLHFEAFHIGMAPVYMAFLRFMGDEDEARQFSYSLE 247

Query: 270 VGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEGMELKLKVTGRIWR 325
           VGGNGRK +WQG+PRSIRDSHRKVRDS DGLIIQR LALF SG +  ELKLKV GRIW+
Sbjct: 248 VGGNGRKFMWQGVPRSIRDSHRKVRDSQDGLIIQRNLALFFSGGDRQELKLKVAGRIWK 306

[Close]

BLAST of CsaV3_4G023570.1 vs. TrEMBL
Match: tr|A0A1U8MR09|A0A1U8MR09_GOSHI (E3 ubiquitin-protein ligase OS=Gossypium hirsutum OX=3635 GN=LOC107940380 PE=3 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 5.4e-138
Identity = 233/299 (77.93%), Postives = 256/299 (85.62%), Query Frame = 0


Query: 30  CKEVTELRLTSIDSQPATSRPEFKGVTFRKAST--GG--FARSRNDVHELLDCTVCMNLM 89
           CK+V E R+T  +   ATS  E +G   RKA+T  GG   A S NDVHELL+C VC+NLM
Sbjct: 8   CKDVIESRITFAEYDMATSSAELRGSPLRKAATSLGGNLGATSTNDVHELLECPVCLNLM 67

Query: 90  HPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAESLELPCVYQNLGCID 149
           +PPIYQC NGHT+CS CKARV N CPTCR+ELGNIRCLALEKVAESLELPC YQ LGC D
Sbjct: 68  YPPIYQCPNGHTVCSICKARVHNSCPTCRNELGNIRCLALEKVAESLELPCRYQILGCHD 127

Query: 150 MFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHEVDMHDGCSFSHRYV 209
           +FPYYSKLKHEKNC+YRPYNCPYAG EC VTGDIP LVMHLK+DH+VDMHDGC+F+HRYV
Sbjct: 128 IFPYYSKLKHEKNCRYRPYNCPYAGAECSVTGDIPFLVMHLKNDHKVDMHDGCTFNHRYV 187

Query: 210 KSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDSEAKQFSYSLE 269
           KSNP EVENATWMLTVFNCFGRQFCLHFEAF +G APVYMAFLRFMGD+ EA+QFSYSLE
Sbjct: 188 KSNPHEVENATWMLTVFNCFGRQFCLHFEAFHIGMAPVYMAFLRFMGDEDEARQFSYSLE 247

Query: 270 VGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEGMELKLKVTGRIWR 325
           VGG GRK+IWQG+PRSIRDSHRKVRDS DGLIIQR LALF SG +  ELKLKV GRIW+
Sbjct: 248 VGGYGRKVIWQGVPRSIRDSHRKVRDSQDGLIIQRNLALFFSGGDRQELKLKVAGRIWK 306

The following BLAST results are available for this feature:

BLAST of CsaV3_4G023570.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN54095.1	3.5e-197	100.00	hypothetical protein Csa_4G285710 [Cucumis sativus]	[more]
XP_008449780.1	2.5e-195	99.08	PREDICTED: E3 ubiquitin-protein ligase SINAT2 [Cucumis melo]	[more]
XP_022153850.1	7.3e-171	88.00	putative E3 ubiquitin-protein ligase SINAT1 [Momordica charantia] >XP_022153851....	[more]
OMO59923.1	2.1e-138	77.59	Seven-in-absentia protein, sina [Corchorus olitorius]	[more]
OMO75674.1	2.8e-138	77.59	Seven-in-absentia protein, sina [Corchorus capsularis]	[more]

BLAST of CsaV3_4G023570.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G58040.1	3.0e-134	72.76	seven in absentia of Arabidopsis 2	[more]
AT2G41980.1	3.1e-131	72.48	Protein with RING/U-box and TRAF-like domains	[more]
AT3G61790.1	4.8e-124	77.08	Protein with RING/U-box and TRAF-like domains	[more]
AT4G27880.1	1.3e-118	73.91	Protein with RING/U-box and TRAF-like domains	[more]
AT5G53360.1	5.9e-90	71.29	TRAF-like superfamily protein	[more]

BLAST of CsaV3_4G023570.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M2P4\|SINA2_ARATH	5.4e-133	72.76	E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana OX=3702 GN=SINAT2 PE=...	[more]
sp\|P93748\|SINA1_ARATH	5.6e-130	72.48	Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana OX=3702 GN=S...	[more]
sp\|Q10L91\|DIS1_ORYSJ	1.2e-124	77.25	E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS...	[more]
sp\|Q84JL3\|SINA3_ARATH	8.6e-123	77.08	E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=...	[more]
sp\|Q9STN8\|SINA4_ARATH	2.4e-117	73.91	E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana OX=3702 GN=SINAT4 PE=...	[more]

BLAST of CsaV3_4G023570.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KWV9\|A0A0A0KWV9_CUCSA	2.3e-197	100.00	E3 ubiquitin-protein ligase OS=Cucumis sativus OX=3659 GN=Csa_4G285710 PE=3 SV=1	[more]
tr\|A0A1S3BMT4\|A0A1S3BMT4_CUCME	1.6e-195	99.08	E3 ubiquitin-protein ligase OS=Cucumis melo OX=3656 GN=LOC103491565 PE=3 SV=1	[more]
tr\|A0A1R3GPA5\|A0A1R3GPA5_9ROSI	1.4e-138	77.59	E3 ubiquitin-protein ligase OS=Corchorus olitorius OX=93759 GN=COLO4_34000 PE=3 ...	[more]
tr\|A0A1R3HZB3\|A0A1R3HZB3_COCAP	1.8e-138	77.59	E3 ubiquitin-protein ligase OS=Corchorus capsularis OX=210143 GN=CCACVL1_16097 P...	[more]
tr\|A0A1U8MR09\|A0A1U8MR09_GOSHI	5.4e-138	77.93	E3 ubiquitin-protein ligase OS=Gossypium hirsutum OX=3635 GN=LOC107940380 PE=3 S...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007275	multicellular organism development
GO:0006511	ubiquitin-dependent protein catabolic process

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR013010	Znf_SIAH
IPR001841	Znf_RING
IPR004162	SINA-like
IPR018121	7-in-absentia-prot_TRAF-dom
IPR008974	TRAF-like
IPR013083	Znf_RING/FYVE/PHD

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_4G023570	CsaV3_4G023570	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G023570.1	CsaV3_4G023570.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G023570.1.cds4	CsaV3_4G023570.1.cds4	CDS
CsaV3_4G023570.1.cds3	CsaV3_4G023570.1.cds3	CDS
CsaV3_4G023570.1.cds2	CsaV3_4G023570.1.cds2	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G023570.1.exon4	CsaV3_4G023570.1.exon4	exon
CsaV3_4G023570.1.exon3	CsaV3_4G023570.1.exon3	exon
CsaV3_4G023570.1.exon2	CsaV3_4G023570.1.exon2	exon
CsaV3_4G023570.1.exon1	CsaV3_4G023570.1.exon1	exon

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 15..131 e-value: 1.7E-7 score: 32.8
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 132..186 e-value: 1.7E-16 score: 62.3
IPR008974	TRAF-like	GENE3D	G3DSA:2.60.210.10		coord: 199..320 e-value: 2.7E-32 score: 113.3
IPR008974	TRAF-like	SUPERFAMILY	SSF49599	TRAF domain-like	coord: 131..322
IPR018121	Seven-in-absentia protein, TRAF-like domain	PFAM	PF03145	Sina	coord: 120..319 e-value: 8.9E-75 score: 251.0
IPR004162	E3 ubiquitin-protein ligase SIN-like	PANTHER	PTHR10315	E3 UBIQUITIN PROTEIN LIGASE SIAH	coord: 60..324
None	No IPR available	PANTHER	PTHR10315:SF42	SUBFAMILY NOT NAMED	coord: 60..324
None	No IPR available	CDD	cd16571	RING-HC_SIAHs	coord: 76..114 e-value: 2.70188E-12 score: 59.6058
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 60..118
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 78..114 score: 9.214
IPR013010	Zinc finger, SIAH-type	PROSITE	PS51081	ZF_SIAH	coord: 131..191 score: 13.759