CsaV3_3G038710.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G038710.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	E3 ubiquitin-protein ligase rma1h1
Location	chr3 : 31876042 .. 31879209 (-)
Sequence length	1275

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTAATATAGAATATTTATGGAACAAAATGAAAACAAATCCAGAATTAAGAAAATAATAATAATTTAGGGTTGGAAGAATGAAAAGAAAGAAAGAAAGAAAGAAAGAAGGTGTGATGAAGATGTTAGCATAAATTTAGAAACATAAGGTTAGTTTTGCTAAAAATCCAATCCTGAAAGATACGTAAAAAGAATTGCCAAAAGAAAGAAGTGTTTTTAAATCTCTTTCGTTGTAGTTTGTACCATTCATCACTCAATTCACTGTTCACTCAACAACAAGAAAGAAGAAGAAGAGGAGGAAGAAATTTAAGTTAGTGCTGCCAATCCGACGCCGCCACATACATCTTCTTCTTCGTATCTCAGCCGCTCGATCCCTTTAATCCTCATTTTTCAATTCATCCCATCCATCGTTTCATCATCGTCGTATGATTTTTGTTCCTTTCTATTTCTATTTCCAATATAATCTCCATTTTCTTTTTCTCTCTCTCACTTCTTTTTTATAATTTTCTTTGCTTCTTTGTGGACCAGATCGCTGATCGATGCTGAATCTGCTTCAACGCACCTGGCTTTGAGTGGTACACAATTTGGGGTTTATTTGAATGATATGGAATCAAGAGCAGTCGTCTTGAGTCAGGTGTTCAGTTTTCTTAATTCTTTTTCAGAATCGGTTTGAGAATTTTGTTGTTTGGGTGCTGTTGCCATAAACCCTAATTGTCTTTCCCAGTTTAGAATTGGGATTATATATATATATATATATATATCTATATATATATATTAAAAGAAAAAAGGAAAAAACTGGTTTTCTTTTATCGTTTGATGAACTGGGATTGATGGGGTTAAGGCTAAGCTTGATGAAATTTCGTGAATTTTTGTCACTGACCGTATAGCGAAATCAATCGAGGGTTTATTGTTTTTCGACTGGGTTTATTTGGTTTGAGAGAATTGGGGTTTTCTCTACGGATTCTTCTCTGGCAGTGCTTTTTAGCCTTTGATGAATTAAAGGATGTGTTGTGAGGGATTTGCTGTTGGAAAAGGGTGGATTGGTCTTTCTGGGCTTGTTCATCTGGGACAGAGTTGATCTCTCGTGCTTTGAGGCTATTTGAATTTTATGGTGGCATTGGGGTTTCTTCTAACCTGAGGCCGCTAAGTTTCGGGTTAAATTTGGGGGTTTTCTTTTTCCTTTTTTTCGTTTTCTTGATAAATTTGTAATGGGTGATGAAATCTTTGATGCAATGAACCTTGACTTGAATCTGGGTCCTATTCCAGAGCCGCTTTCAAATTCGGTTCCAAATGAAGATGTCAATTTGGCTGATTTGACTGAGGAATCCGTTCATAGATTTGGGGAAACTATCAGGTTTAGGACGAGACAACGGTGGAGAAGGCGTCAAGTCCAAATCCCTCCTGAGACTCAGAATATCACTATGGAATTGAGTGAAATCATAGTGAATTCAGGCAATGGGAATTCATTACAGCCATTACAACCTGGTGAGGGTAGTATTACTGCTGAGGAAAGGAAAAATGAGACAGGGAAAACTTGTGAAATTAACAATGAAGCTTTGGAAGATGGAAAAACAGAGAATAAGAGTGATGTTGAAAAGGGCAGTGACTCTGATGGGAGTTTCTTTGATTGCAATATATGTCTGGATTTGTCTAGAGACCCTGTTGTAACTTGTTGCGGTCATCTATACTGCTGGCCATGCCTTTATCGATGGTTACATCTACATTCAGATGCCAAGGAATGTCCTGTATGTAAAGGAGAGGTTACTACAAAAAACGTGACTCCAATTTATGGGCGTGGCAGCAATACACCTGTGACAGAGGAGGATGCTACACTTAAGATTCCTCCAAGGCCCCATGCTCGAAAGGTTGAAAGTTTGAGGCAAACCATCCAGAGGACTCCATTTAGTTTCCCAGTGGAGGATATGATTCGGCGATTAGGAAACAGATTCGATTTTAATCGTGATCTAGACCAACCACCAGAGCCAGATAGCTCAAATGAAACATTTGGTAGATCTCCAACATTGTTGAATAGGATTTTAACATCCAGGGGTATTCGTAGAGAACGAATTTCATTGCCTCATGATGATGTAGGAGATTTAGCACACACTGATGTGTCTAGCATTGAGGCAGGGGAAACACGTCTTCAATCTCTCCCAGTGCTTCGATCATTACTACACCGAACGCGAGTTTCTTCTCTTACTTCTGCGTTTAATTCTGCTGATAGGCTACCAGATGGTTTTTTGTATACTGATCCGCTCATCCCTAGAAGCCAAGAGCAGCCTCCTCCACCTGTTGAGGATAGAGATTCTTTCTCTAGTATTGCTGCTGTCATCAATTCTGAGAGTCAAATGGACACTGCTGTAGAAATTGATTCCATGGTTTCCATTTCAACATCATCCTCCAGAAGGAGAAATGATGCTTTACAAGTTTCGGATGTAGACAGTGGAAACTCTCGAGCACCCAGACGGAGAAGATTAGCTTGAAAAGACCTCTATTATCTGGGTCCTAAGATTAGCTTGAAAAGACCTCTATTATCTGGGTCCTAAGATCGATAAATGAATCAGGGCTATAATATTTCAACACCTATGTAAGTGCTACTTGGATCTTCTATTTACTTTTTCACTCAGCAAAAAGAATTTTAACTCTTGCTTCGATGATGGACTATTACATGGTCCATATTCAACGATCTTCATTTTACTGCTTATTGTACGTGAATTGAAATGTTGGCATACTTCTTGAACATATTGAGAAGCAAATAAGTAAATCAAGTAGATTAATTCCCTTTTTTTCTCCCTCTTTTGTAACCTTTTATGCATCAAAACCTTCGTTCAACGTTTTCTTACAAATCCATATGTCTTCTTCTTGACCTGTGTACCCCTTAACCGCGTCTTTTTTATACTTTCCCGTACAAAATGTGTTTATCATTGACCATATTCACATTCAGGAAGTATAAAAATGGTCAATACTATAATTGTTTCTCTTTAGTGATCTTAAAGCAGGATTTCATGTACCTTTTTAATTTTTCTGTTCAGATTAGCTCAGCATAATGAGAGTGCATTCATAAGTTCTTCCACAGTTTGAGCTTTTTCTGCTTCTCTTTTATTATTGTCCATTAAACAGACATGGGATTTGACTATCCTCAAATCAATTAAATTTGAAATAGTTTGAA

mRNA sequence

ATGGGTGATGAAATCTTTGATGCAATGAACCTTGACTTGAATCTGGGTCCTATTCCAGAGCCGCTTTCAAATTCGGTTCCAAATGAAGATGTCAATTTGGCTGATTTGACTGAGGAATCCGTTCATAGATTTGGGGAAACTATCAGGTTTAGGACGAGACAACGGTGGAGAAGGCGTCAAGTCCAAATCCCTCCTGAGACTCAGAATATCACTATGGAATTGAGTGAAATCATAGTGAATTCAGGCAATGGGAATTCATTACAGCCATTACAACCTGGTGAGGGTAGTATTACTGCTGAGGAAAGGAAAAATGAGACAGGGAAAACTTGTGAAATTAACAATGAAGCTTTGGAAGATGGAAAAACAGAGAATAAGAGTGATGTTGAAAAGGGCAGTGACTCTGATGGGAGTTTCTTTGATTGCAATATATGTCTGGATTTGTCTAGAGACCCTGTTGTAACTTGTTGCGGTCATCTATACTGCTGGCCATGCCTTTATCGATGGTTACATCTACATTCAGATGCCAAGGAATGTCCTGTATGTAAAGGAGAGGTTACTACAAAAAACGTGACTCCAATTTATGGGCGTGGCAGCAATACACCTGTGACAGAGGAGGATGCTACACTTAAGATTCCTCCAAGGCCCCATGCTCGAAAGGTTGAAAGTTTGAGGCAAACCATCCAGAGGACTCCATTTAGTTTCCCAGTGGAGGATATGATTCGGCGATTAGGAAACAGATTCGATTTTAATCGTGATCTAGACCAACCACCAGAGCCAGATAGCTCAAATGAAACATTTGGTAGATCTCCAACATTGTTGAATAGGATTTTAACATCCAGGGGTATTCGTAGAGAACGAATTTCATTGCCTCATGATGATGTAGGAGATTTAGCACACACTGATGTGTCTAGCATTGAGGCAGGGGAAACACGTCTTCAATCTCTCCCAGTGCTTCGATCATTACTACACCGAACGCGAGTTTCTTCTCTTACTTCTGCGTTTAATTCTGCTGATAGGCTACCAGATGGTTTTTTGTATACTGATCCGCTCATCCCTAGAAGCCAAGAGCAGCCTCCTCCACCTGTTGAGGATAGAGATTCTTTCTCTAGTATTGCTGCTGTCATCAATTCTGAGAGTCAAATGGACACTGCTGTAGAAATTGATTCCATGGTTTCCATTTCAACATCATCCTCCAGAAGGAGAAATGATGCTTTACAAGTTTCGGATGTAGACAGTGGAAACTCTCGAGCACCCAGACGGAGAAGATTAGCTTGA

Coding sequence (CDS)

ATGGGTGATGAAATCTTTGATGCAATGAACCTTGACTTGAATCTGGGTCCTATTCCAGAGCCGCTTTCAAATTCGGTTCCAAATGAAGATGTCAATTTGGCTGATTTGACTGAGGAATCCGTTCATAGATTTGGGGAAACTATCAGGTTTAGGACGAGACAACGGTGGAGAAGGCGTCAAGTCCAAATCCCTCCTGAGACTCAGAATATCACTATGGAATTGAGTGAAATCATAGTGAATTCAGGCAATGGGAATTCATTACAGCCATTACAACCTGGTGAGGGTAGTATTACTGCTGAGGAAAGGAAAAATGAGACAGGGAAAACTTGTGAAATTAACAATGAAGCTTTGGAAGATGGAAAAACAGAGAATAAGAGTGATGTTGAAAAGGGCAGTGACTCTGATGGGAGTTTCTTTGATTGCAATATATGTCTGGATTTGTCTAGAGACCCTGTTGTAACTTGTTGCGGTCATCTATACTGCTGGCCATGCCTTTATCGATGGTTACATCTACATTCAGATGCCAAGGAATGTCCTGTATGTAAAGGAGAGGTTACTACAAAAAACGTGACTCCAATTTATGGGCGTGGCAGCAATACACCTGTGACAGAGGAGGATGCTACACTTAAGATTCCTCCAAGGCCCCATGCTCGAAAGGTTGAAAGTTTGAGGCAAACCATCCAGAGGACTCCATTTAGTTTCCCAGTGGAGGATATGATTCGGCGATTAGGAAACAGATTCGATTTTAATCGTGATCTAGACCAACCACCAGAGCCAGATAGCTCAAATGAAACATTTGGTAGATCTCCAACATTGTTGAATAGGATTTTAACATCCAGGGGTATTCGTAGAGAACGAATTTCATTGCCTCATGATGATGTAGGAGATTTAGCACACACTGATGTGTCTAGCATTGAGGCAGGGGAAACACGTCTTCAATCTCTCCCAGTGCTTCGATCATTACTACACCGAACGCGAGTTTCTTCTCTTACTTCTGCGTTTAATTCTGCTGATAGGCTACCAGATGGTTTTTTGTATACTGATCCGCTCATCCCTAGAAGCCAAGAGCAGCCTCCTCCACCTGTTGAGGATAGAGATTCTTTCTCTAGTATTGCTGCTGTCATCAATTCTGAGAGTCAAATGGACACTGCTGTAGAAATTGATTCCATGGTTTCCATTTCAACATCATCCTCCAGAAGGAGAAATGATGCTTTACAAGTTTCGGATGTAGACAGTGGAAACTCTCGAGCACCCAGACGGAGAAGATTAGCTTGA

Protein sequence

MGDEIFDAMNLDLNLGPIPEPLSNSVPNEDVNLADLTEESVHRFGETIRFRTRQRWRRRQVQIPPETQNITMELSEIIVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALEDGKTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKECPVCKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARKVESLRQTIQRTPFSFPVEDMIRRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRERISLPHDDVGDLAHTDVSSIEAGETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGFLYTDPLIPRSQEQPPPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAPRRRRLA

Homology

[Close]

BLAST of CsaV3_3G038710.1 vs. NCBI nr
Match: XP_011652084.1 (PREDICTED: uncharacterized protein LOC101220497 [Cucumis sativus] >KGN59290.1 hypothetical protein Csa_3G806220 [Cucumis sativus])

HSP 1 Score: 842.8 bits (2176), Expect = 5.1e-241
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MGDEIFDAMNLDLNLGPIPEPLSNSVPNEDVNLADLTEESVHRFGETIRFRTRQRWRRRQ 60
           MGDEIFDAMNLDLNLGPIPEPLSNSVPNEDVNLADLTEESVHRFGETIRFRTRQRWRRRQ
Sbjct: 1   MGDEIFDAMNLDLNLGPIPEPLSNSVPNEDVNLADLTEESVHRFGETIRFRTRQRWRRRQ 60

Query: 61  VQIPPETQNITMELSEIIVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALEDG 120
           VQIPPETQNITMELSEIIVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALEDG
Sbjct: 61  VQIPPETQNITMELSEIIVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALEDG 120

Query: 121 KTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKECPV 180
           KTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKECPV
Sbjct: 121 KTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKECPV 180

Query: 181 CKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARKVESLRQTIQRTPFSFPVEDMI 240
           CKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARKVESLRQTIQRTPFSFPVEDMI
Sbjct: 181 CKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARKVESLRQTIQRTPFSFPVEDMI 240

Query: 241 RRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRERISLPHDDVGDLAHT 300
           RRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRERISLPHDDVGDLAHT
Sbjct: 241 RRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRERISLPHDDVGDLAHT 300

Query: 301 DVSSIEAGETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGFLYTDPLIPRSQEQPPP 360
           DVSSIEAGETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGFLYTDPLIPRSQEQPPP
Sbjct: 301 DVSSIEAGETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGFLYTDPLIPRSQEQPPP 360

Query: 361 PVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAPRR 420
           PVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAPRR
Sbjct: 361 PVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAPRR 420

Query: 421 RRLA 425
           RRLA
Sbjct: 421 RRLA 424

[Close]

BLAST of CsaV3_3G038710.1 vs. NCBI nr
Match: XP_008443034.1 (PREDICTED: uncharacterized protein LOC103486753 [Cucumis melo])

HSP 1 Score: 819.3 bits (2115), Expect = 6.0e-234
Identity = 412/424 (97.17%), Postives = 417/424 (98.35%), Query Frame = 0


Query: 1   MGDEIFDAMNLDLNLGPIPEPLSNSVPNEDVNLADLTEESVHRFGETIRFRTRQRWRRRQ 60
           MGDE+FDAMNLDLNLGPIPEPLSNSVPNEDVNLADLTEE VHRFGETIRFRTRQRWRRRQ
Sbjct: 1   MGDEMFDAMNLDLNLGPIPEPLSNSVPNEDVNLADLTEEPVHRFGETIRFRTRQRWRRRQ 60

Query: 61  VQIPPETQNITMELSEIIVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALEDG 120
           VQIPPETQNITMELSEI+VNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALED 
Sbjct: 61  VQIPPETQNITMELSEIMVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALEDE 120

Query: 121 KTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKECPV 180
           KTENKSDVEKGSDSDGSFFDCNICLDL+RDPVVTCCGHLYCWPCLYRWLHLHSDAKECPV
Sbjct: 121 KTENKSDVEKGSDSDGSFFDCNICLDLARDPVVTCCGHLYCWPCLYRWLHLHSDAKECPV 180

Query: 181 CKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARKVESLRQTIQRTPFSFPVEDMI 240
           CKGEVTTKNVTPIYGRGSNTP TEEDATLKIP RPHARKVESLRQTIQRT FSFPVEDMI
Sbjct: 181 CKGEVTTKNVTPIYGRGSNTPATEEDATLKIPLRPHARKVESLRQTIQRTAFSFPVEDMI 240

Query: 241 RRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRERISLPHDDVGDLAHT 300
           RRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRE+ISLPHDDVGDLAHT
Sbjct: 241 RRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRREQISLPHDDVGDLAHT 300

Query: 301 DVSSIEAGETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGFLYTDPLIPRSQEQPPP 360
           DVSSIE GETRLQSLPVLRSLLHRTRVSSL SAFNSADRLP+GFLYTDPLIPRSQEQPPP
Sbjct: 301 DVSSIETGETRLQSLPVLRSLLHRTRVSSLASAFNSADRLPEGFLYTDPLIPRSQEQPPP 360

Query: 361 PVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAPRR 420
           PVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAPRR
Sbjct: 361 PVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAPRR 420

Query: 421 RRLA 425
           RRLA
Sbjct: 421 RRLA 424

[Close]

BLAST of CsaV3_3G038710.1 vs. NCBI nr
Match: XP_022982955.1 (uncharacterized protein LOC111481648 [Cucurbita maxima])

HSP 1 Score: 776.5 bits (2004), Expect = 4.5e-221
Identity = 396/426 (92.96%), Postives = 405/426 (95.07%), Query Frame = 0


Query: 1   MGDEIFDAMNLDLNLGPIPEPLSNSVPN-EDVNLADLTEESVHRFGETIRFRTRQRWRRR 60
           MGDEIFDAMNLDLNLGPIPEPLSNSV   EDVNLADLTE+ VHRFGE IRFRTRQRWRRR
Sbjct: 1   MGDEIFDAMNLDLNLGPIPEPLSNSVLQIEDVNLADLTEDPVHRFGEAIRFRTRQRWRRR 60

Query: 61  QVQIPPETQNITMELSEIIVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALED 120
           QVQIP ETQNITMELSEI+VNSGNGN+LQPLQ GEGSITAEERKNE GKTCEINNEALED
Sbjct: 61  QVQIPSETQNITMELSEIMVNSGNGNTLQPLQAGEGSITAEERKNEAGKTCEINNEALED 120

Query: 121 GKTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKECP 180
            KTENKSDVEKGSDSDGSFFDCNICLDL+RDPVVTCCGHLYCWPCLYRWLHLHS+AKECP
Sbjct: 121 EKTENKSDVEKGSDSDGSFFDCNICLDLARDPVVTCCGHLYCWPCLYRWLHLHSEAKECP 180

Query: 181 VCKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARKVESLRQTIQRTPFSFPVEDM 240
           VCKGEVTTKNVTPIYGRG NTPVTEEDATLKIP RPHARKVESLRQTIQRT  SFPVEDM
Sbjct: 181 VCKGEVTTKNVTPIYGRGGNTPVTEEDATLKIPLRPHARKVESLRQTIQRTALSFPVEDM 240

Query: 241 IRRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRERISL-PHDDVGDLA 300
           IRRLGNRFDFNRDLDQPPEPDSS+ETFGRSPTLLNR+LTSRGIRRE+ISL PHDDVGDL+
Sbjct: 241 IRRLGNRFDFNRDLDQPPEPDSSHETFGRSPTLLNRLLTSRGIRREQISLPPHDDVGDLS 300

Query: 301 HTDVSSIEAGETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGFLYTDPLIPRSQEQP 360
           H DVS IE GETRLQSLPVLRSLLHRTRVSSLTSAFNS DRLPDG LYTDPLIPR QEQP
Sbjct: 301 HADVSGIETGETRLQSLPVLRSLLHRTRVSSLTSAFNSTDRLPDGLLYTDPLIPRIQEQP 360

Query: 361 PPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAP 420
           PPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRR DALQVSDVDSGNSRAP
Sbjct: 361 PPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRTDALQVSDVDSGNSRAP 420

Query: 421 RRRRLA 425
           RRRRLA
Sbjct: 421 RRRRLA 426

[Close]

BLAST of CsaV3_3G038710.1 vs. NCBI nr
Match: XP_023527653.1 (uncharacterized protein LOC111790817 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 774.2 bits (1998), Expect = 2.2e-220
Identity = 396/426 (92.96%), Postives = 405/426 (95.07%), Query Frame = 0


Query: 1   MGDEIFDAMNLDLNLGPIPEPLSNSVPN-EDVNLADLTEESVHRFGETIRFRTRQRWRRR 60
           MGDEIFDAMNLDLNLGPIPEPLSNSV   EDVNLADLTE+ VHRFGE IRFRTRQRWRRR
Sbjct: 1   MGDEIFDAMNLDLNLGPIPEPLSNSVLQIEDVNLADLTEDPVHRFGEAIRFRTRQRWRRR 60

Query: 61  QVQIPPETQNITMELSEIIVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALED 120
           QVQIP ETQNITMELSEI+VNSGNGN+LQPLQ GEGSITAEERKNE GKTCEINNEALED
Sbjct: 61  QVQIPSETQNITMELSEIMVNSGNGNTLQPLQAGEGSITAEERKNEAGKTCEINNEALED 120

Query: 121 GKTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKECP 180
            KTENKSDVEKGSDSDGSFFDCNICLDL+RDPVVTCCGHLYCWPCLYRWLHLHSDAKECP
Sbjct: 121 EKTENKSDVEKGSDSDGSFFDCNICLDLARDPVVTCCGHLYCWPCLYRWLHLHSDAKECP 180

Query: 181 VCKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARKVESLRQTIQRTPFSFPVEDM 240
           VCKGEVTTKNVTPIYGRG NTPVTEEDATLKIP RPHARKVESLRQTIQRT  SFPVEDM
Sbjct: 181 VCKGEVTTKNVTPIYGRGGNTPVTEEDATLKIPLRPHARKVESLRQTIQRTALSFPVEDM 240

Query: 241 IRRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRERISL-PHDDVGDLA 300
           IRRLGNRFDFNRDLDQP EPDSS+ETFGRSPTLLNR+LTSRGIRRE++SL PHD+VGDLA
Sbjct: 241 IRRLGNRFDFNRDLDQPLEPDSSHETFGRSPTLLNRLLTSRGIRREQMSLPPHDEVGDLA 300

Query: 301 HTDVSSIEAGETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGFLYTDPLIPRSQEQP 360
           H DVS IE GETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDG LYTDPLIPR QEQP
Sbjct: 301 HADVSGIETGETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGLLYTDPLIPRIQEQP 360

Query: 361 PPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAP 420
           PPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRR DALQVSDVDSGNSRAP
Sbjct: 361 PPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRTDALQVSDVDSGNSRAP 420

Query: 421 RRRRLA 425
           RRRRLA
Sbjct: 421 RRRRLA 426

[Close]

BLAST of CsaV3_3G038710.1 vs. NCBI nr
Match: XP_022934283.1 (uncharacterized protein LOC111441493 [Cucurbita moschata])

HSP 1 Score: 770.4 bits (1988), Expect = 3.2e-219
Identity = 395/426 (92.72%), Postives = 403/426 (94.60%), Query Frame = 0


Query: 1   MGDEIFDAMNLDLNLGPIPEPLSNSVPN-EDVNLADLTEESVHRFGETIRFRTRQRWRRR 60
           MGDEIFDAMNLDLNLGPIPEPLSNSV   EDVNLADLTE+ VHRFGE IRFRTRQRWRRR
Sbjct: 1   MGDEIFDAMNLDLNLGPIPEPLSNSVLQIEDVNLADLTEDPVHRFGEAIRFRTRQRWRRR 60

Query: 61  QVQIPPETQNITMELSEIIVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALED 120
           QVQIP ETQNITMELSEI+VNSGNGN+LQPLQ GEGSITAEERKNE GKTCEINNEALED
Sbjct: 61  QVQIPSETQNITMELSEIMVNSGNGNTLQPLQAGEGSITAEERKNEAGKTCEINNEALED 120

Query: 121 GKTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKECP 180
            KTENKSDVEKGSDSDGSFFDCNICLDL+RDPVVTCCGHLYCWPCLYRWLHLHSDAKECP
Sbjct: 121 EKTENKSDVEKGSDSDGSFFDCNICLDLARDPVVTCCGHLYCWPCLYRWLHLHSDAKECP 180

Query: 181 VCKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARKVESLRQTIQRTPFSFPVEDM 240
           VCKGEVTTKNVTPIYGRG NTPVTEEDATLKIP RPHARKVESLRQTIQRT  SFPVEDM
Sbjct: 181 VCKGEVTTKNVTPIYGRGGNTPVTEEDATLKIPLRPHARKVESLRQTIQRTALSFPVEDM 240

Query: 241 IRRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRERISL-PHDDVGDLA 300
           IRRLGNRFDFNRD DQPPEPDSS+ETFGRSPTLLNR+LTSRGIRRE+ISL P+ DVGDLA
Sbjct: 241 IRRLGNRFDFNRDHDQPPEPDSSHETFGRSPTLLNRLLTSRGIRREQISLPPNGDVGDLA 300

Query: 301 HTDVSSIEAGETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGFLYTDPLIPRSQEQP 360
           H DVS IE GETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDG LYTDPLIPR QEQP
Sbjct: 301 HADVSGIETGETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGLLYTDPLIPRIQEQP 360

Query: 361 PPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAP 420
           PPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSS RR DALQVSDVDSGNSRAP
Sbjct: 361 PPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSSRRTDALQVSDVDSGNSRAP 420

Query: 421 RRRRLA 425
           RRRRLA
Sbjct: 421 RRRRLA 426

[Close]

BLAST of CsaV3_3G038710.1 vs. TAIR10
Match: AT3G58030.1 (RING/U-box superfamily protein)

HSP 1 Score: 389.8 bits (1000), Expect = 2.1e-108
Identity = 240/448 (53.57%), Postives = 297/448 (66.29%), Query Frame = 0


Query: 1   MGDEIFDAMNLDLNLGPIPEPLSNSVPNEDVNLADLTEESVHRFGETI-RFRTRQRWRRR 60
           MG+E+ D MNLDLNLGP PE      PNE VNLAD T +   R  E + R RTR R R R
Sbjct: 1   MGEELADTMNLDLNLGPGPESDLQPAPNETVNLADWTNDPPERSSEAVTRIRTRHRTRFR 60

Query: 61  QVQIP----PETQNITMELSEIIVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNE 120
           Q+ +P     ET  + +EL++++ NS N  +   +Q GEGS    ER NE  K CE  + 
Sbjct: 61  QLNLPIPVLSETHTMAIELNQLMGNSVNRAA---MQTGEGS----ERGNEDLKMCENGDG 120

Query: 121 ALEDGKTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDA 180
           AL DG  + K+DVEK S SDG+FFDCNICLDLS++PV+TCCGHLYCWPCLY+WL + SDA
Sbjct: 121 ALGDGVLDKKADVEKSSGSDGNFFDCNICLDLSKEPVLTCCGHLYCWPCLYQWLQI-SDA 180

Query: 181 KECPVCKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARKVESLRQTIQRTPFSFP 240
           KECPVCKGEVT+K VTPIYGRG++    EE    K+P RPHAR++ESLR TIQR+PF+ P
Sbjct: 181 KECPVCKGEVTSKTVTPIYGRGNHKREIEESLDTKVPMRPHARRIESLRNTIQRSPFTIP 240

Query: 241 VEDMIRRLGNRFDFNRDLDQPPEPDSSNETFG-----RSPTLLNRILTSRGIRRER---- 300
           +E+MIRR+ NRF    D D  P PD SN         R+ ++LNR++TSRG+R E+    
Sbjct: 241 MEEMIRRIQNRF----DRDSTPVPDFSNREASERVNDRANSILNRLMTSRGVRSEQNQAS 300

Query: 301 -----ISLPHDDVGDLAHTDVSSIEA-GETRLQSLPVLRSL-LHR-TRVSSLTSAFNSAD 360
                     +D+ DL       +E    TR   L + R L  HR  R+S+ TSA +SA+
Sbjct: 301 AXXXXXXAASEDI-DLNPNIAPDLEGESNTRFHPLLIRRQLQSHRVARISTFTSALSSAE 360

Query: 361 RLPDGFLYTDPLIPRSQEQ---PPPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSIST 420
           RL D +  T PL    QEQ    P  V+DRDSFSSIAAVINSESQ+DTAVEIDSM ++ST
Sbjct: 361 RLVDAYFRTHPLGRNHQEQNHHAPVVVDDRDSFSSIAAVINSESQVDTAVEIDSM-ALST 420

Query: 421 SSSRRRND-ALQVSDVDSGNSRAPRRRR 423
           SSSRRRN+   +VSDVDS +SR PRRRR
Sbjct: 421 SSSRRRNENGSRVSDVDSADSRPPRRRR 434

[Close]

BLAST of CsaV3_3G038710.1 vs. TAIR10
Match: AT2G42030.1 (RING/U-box superfamily protein)

HSP 1 Score: 252.7 bits (644), Expect = 4.1e-67
Identity = 192/447 (42.95%), Postives = 248/447 (55.48%), Query Frame = 0


Query: 1   MGDEIFDAMNLDLNLGPIP----EPLSNSVPNEDVN-LADLTEESVHRFGETIRFRTRQR 60
           MG+EI   +NLDLNLGP P    EP +N   ++  N LA    ES+ RF    R R R R
Sbjct: 1   MGEEISSTVNLDLNLGPDPELGLEPATNYARSDWGNGLAARESESLRRF----RSRYRSR 60

Query: 61  WRR-RQVQIPPETQNITMELSEIIVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINN 120
           +RR   + +  ET +  MELS++++ SGN   +  L  GEGS+ + ER  E  K CE  +
Sbjct: 61  FRRIDMLPVLAETHSPAMELSQLLITSGN---VVALPAGEGSMASGERVIEDSKKCENGS 120

Query: 121 EAL-EDGKTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHS 180
           + + ED  TE K DVEK   SDGSFFDC ICLDLS+DPVVT CGHLYCW CLY+WL + S
Sbjct: 121 KVMAEDNVTEEKRDVEKSVGSDGSFFDCYICLDLSKDPVVTNCGHLYCWSCLYQWLQV-S 180

Query: 181 DAKECPVCKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARKVESLRQTIQRTPFS 240
           +AKECPVCKGEV+ K VTPIYGRG     +EE +  KIP RP AR+ ESLR T+ R+   
Sbjct: 181 EAKECPVCKGEVSVKTVTPIYGRGIQKRESEEVSNTKIPSRPQARRTESLRTTLNRSG-H 240

Query: 241 FPVEDMIRRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRER------- 300
            P E + R L +R +            S+ E   R+   LNR +TSRG+R E        
Sbjct: 241 IPTE-IFRHLQDRLE---------RESSTGER--RARPSLNRFMTSRGVRAEENQSSEAL 300

Query: 301 ISLPHDDVGDLAHTDVSSIEAGETRLQSLPVLRSLLHRT-------RVSSLTSAFNSADR 360
           +    D++ D+    +++    E   ++L   R+L  +        RVSS T   +SA+R
Sbjct: 301 VEPSSDEINDI-DLILNNAPENEEENENLSSSRALATQRRWAQMYGRVSSFT--LSSAER 360

Query: 361 LPDGFLYTDPLIPRSQEQ---PPPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTS 420
           L D +L T  L  R+QEQ   PP  VEDRDSFSSI                         
Sbjct: 361 LADTYLITHAL-GRNQEQNSSPPVGVEDRDSFSSIVXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 SS-RRRNDALQVSDVDSGNSRAPRRRR 423
            S RR  ++ +VSDVDS +SR  RRRR
Sbjct: 421 XSVRRHENSSRVSDVDSADSRPLRRRR 422

[Close]

BLAST of CsaV3_3G038710.1 vs. TAIR10
Match: AT2G44410.1 (RING/U-box superfamily protein)

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-27
Identity = 65/139 (46.76%), Postives = 88/139 (63.31%), Query Frame = 0


Query: 100 EERKNETGKTCEINNEAL-EDGKTENKS-------DVEKGSDSDGSFFDCNICLDLSRDP 159
           E R +  G   E + E L E+G  ENK+       ++EK S   G FFDCNICL+ + DP
Sbjct: 78  EHRDSTAGVIHERSRERLVENG--ENKTYLIAKALNMEKTSSVPGGFFDCNICLEKAEDP 137

Query: 160 VVTCCGHLYCWPCLYRWLHLHSDAKECPVCKGEVTTKNVTPIYGRGSNTPVTE---EDAT 219
           ++TCCGHL+CW C Y+   ++ + KECPVC GEVT   V PIYG G +   T+   ED  
Sbjct: 138 ILTCCGHLFCWGCFYQLPLIYLNIKECPVCDGEVTDAEVIPIYGNGDDCDGTKPKLEDCG 197

Query: 220 LKIPPRPHARKVESLRQTI 228
           + +PPRP+A++VES+RQ I
Sbjct: 198 ISLPPRPNAKRVESVRQKI 214

[Close]

BLAST of CsaV3_3G038710.1 vs. TAIR10
Match: AT1G19310.1 (RING/U-box superfamily protein)

HSP 1 Score: 119.0 bits (297), Expect = 7.0e-27
Identity = 47/93 (50.54%), Postives = 70/93 (75.27%), Query Frame = 0


Query: 132 SDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKECPVCKGEVTTKNVT 191
           +++D S F+CNICLDL++DP+VT CGHL+CWPCLY+WLHLHS +K+CPVCK  +    + 
Sbjct: 14  NNNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKDCPVCKAVIEEDRLV 73

Query: 192 PIYGRGSNT--PVTEEDATLKIPPRPHARKVES 223
           P+YGRG ++  P ++    L++P RP  ++ E+
Sbjct: 74  PLYGRGKSSADPRSKSIPGLEVPNRPSGQRPET 106

[Close]

BLAST of CsaV3_3G038710.1 vs. TAIR10
Match: AT2G23780.1 (RING/U-box superfamily protein)

HSP 1 Score: 114.8 bits (286), Expect = 1.3e-25
Identity = 50/107 (46.73%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 118 EDGKTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKE 177
           E   + + SD    ++  G  F+CNIC +L++DP+VT CGHL+CWPCLYRWLH HS ++E
Sbjct: 5   ESSTSTSYSDSNNDTNDQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQE 64

Query: 178 CPVCKGEVTTKNVTPIYGRGSN--TPVTEEDATLKIPPRPHARKVES 223
           CPVCK  V    + P+YGRG N   P ++    L+IP RP  ++ E+
Sbjct: 65  CPVCKAVVQDDKLVPLYGRGKNQTDPRSKRYPGLRIPNRPTGQRPET 111

[Close]

BLAST of CsaV3_3G038710.1 vs. Swiss-Prot
Match: sp|Q99942|RNF5_HUMAN (E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens OX=9606 GN=RNF5 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-22
Identity = 48/102 (47.06%), Postives = 67/102 (65.69%), Query Frame = 0


Query: 118 EDGKTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKE 177
           EDG  E  +    G+   G+ F+CNICL+ +R+ VV+ CGHLYCWPCL++WL    + +E
Sbjct: 7   EDGGPEGPNRERGGA---GATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQE 66

Query: 178 CPVCKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARK 220
           CPVCK  ++ + V P+YGRGS  P   +D  LK PPRP  ++
Sbjct: 67  CPVCKAGISREKVVPLYGRGSQKP---QDPRLKTPPRPQGQR 102

[Close]

BLAST of CsaV3_3G038710.1 vs. Swiss-Prot
Match: sp|O35445|RNF5_MOUSE (E3 ubiquitin-protein ligase RNF5 OS=Mus musculus OX=10090 GN=Rnf5 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.9e-22
Identity = 50/102 (49.02%), Postives = 68/102 (66.67%), Query Frame = 0


Query: 118 EDGKTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKE 177
           EDG  E  +  E+G  S  + F+CNICL+ +R+ VV+ CGHLYCWPCL++WL    D +E
Sbjct: 7   EDGGPEGPNR-ERGGAS--ATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQE 66

Query: 178 CPVCKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARK 220
           CPVCK  ++ + V P+YGRGS  P   +D  LK PPRP  ++
Sbjct: 67  CPVCKAGISREKVVPLYGRGSQKP---QDPRLKTPPRPQGQR 102

[Close]

BLAST of CsaV3_3G038710.1 vs. Swiss-Prot
Match: sp|Q5M807|RNF5_RAT (E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus OX=10116 GN=Rnf5 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.9e-22
Identity = 50/102 (49.02%), Postives = 68/102 (66.67%), Query Frame = 0


Query: 118 EDGKTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKE 177
           EDG  E  +  E+G  S  + F+CNICL+ +R+ VV+ CGHLYCWPCL++WL    D +E
Sbjct: 7   EDGGPEGPNR-ERGGAS--ATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQE 66

Query: 178 CPVCKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARK 220
           CPVCK  ++ + V P+YGRGS  P   +D  LK PPRP  ++
Sbjct: 67  CPVCKAGISREKVVPLYGRGSQKP---QDPRLKTPPRPQGQR 102

[Close]

BLAST of CsaV3_3G038710.1 vs. Swiss-Prot
Match: sp|Q6PC78|RN185_DANRE (E3 ubiquitin-protein ligase RNF185 OS=Danio rerio OX=7955 GN=rnf185 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.6e-20
Identity = 41/85 (48.24%), Postives = 57/85 (67.06%), Query Frame = 0


Query: 137 SFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKECPVCKGEVTTKNVTPIYGR 196
           S F+CNICLD S+D V++ CGHL+CWPCL++WL    + + CPVCK  ++   V P+YGR
Sbjct: 37  STFECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGR 96

Query: 197 GSNTPVTEEDATLKIPPRPHARKVE 222
           GS     ++D   K PPRP  ++ E
Sbjct: 97  GS---TGQQDPREKTPPRPQGQRPE 118

[Close]

BLAST of CsaV3_3G038710.1 vs. Swiss-Prot
Match: sp|Q8GUK7|RMA3_ARATH (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 8.0e-20
Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = 0


Query: 131 GSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDA-------KECPVCKG 190
           G  ++   FDCNICLD + DPVVT CGHL+CWPC+Y+WLH+   +         CPVCK 
Sbjct: 34  GQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKS 93

Query: 191 EVTTKNVTPIYGRGSNTPVT-----EEDA-TLKIPPRP 216
            +T  ++ P+YGRG ++P +     ++DA +  IP RP
Sbjct: 94  NITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRP 131

[Close]

BLAST of CsaV3_3G038710.1 vs. TrEMBL
Match: tr|A0A0A0LB96|A0A0A0LB96_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G806220 PE=4 SV=1)

HSP 1 Score: 842.8 bits (2176), Expect = 3.4e-241
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MGDEIFDAMNLDLNLGPIPEPLSNSVPNEDVNLADLTEESVHRFGETIRFRTRQRWRRRQ 60
           MGDEIFDAMNLDLNLGPIPEPLSNSVPNEDVNLADLTEESVHRFGETIRFRTRQRWRRRQ
Sbjct: 1   MGDEIFDAMNLDLNLGPIPEPLSNSVPNEDVNLADLTEESVHRFGETIRFRTRQRWRRRQ 60

Query: 61  VQIPPETQNITMELSEIIVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALEDG 120
           VQIPPETQNITMELSEIIVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALEDG
Sbjct: 61  VQIPPETQNITMELSEIIVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALEDG 120

Query: 121 KTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKECPV 180
           KTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKECPV
Sbjct: 121 KTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKECPV 180

Query: 181 CKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARKVESLRQTIQRTPFSFPVEDMI 240
           CKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARKVESLRQTIQRTPFSFPVEDMI
Sbjct: 181 CKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARKVESLRQTIQRTPFSFPVEDMI 240

Query: 241 RRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRERISLPHDDVGDLAHT 300
           RRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRERISLPHDDVGDLAHT
Sbjct: 241 RRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRERISLPHDDVGDLAHT 300

Query: 301 DVSSIEAGETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGFLYTDPLIPRSQEQPPP 360
           DVSSIEAGETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGFLYTDPLIPRSQEQPPP
Sbjct: 301 DVSSIEAGETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGFLYTDPLIPRSQEQPPP 360

Query: 361 PVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAPRR 420
           PVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAPRR
Sbjct: 361 PVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAPRR 420

Query: 421 RRLA 425
           RRLA
Sbjct: 421 RRLA 424

[Close]

BLAST of CsaV3_3G038710.1 vs. TrEMBL
Match: tr|A0A1S3B7W0|A0A1S3B7W0_CUCME (uncharacterized protein LOC103486753 OS=Cucumis melo OX=3656 GN=LOC103486753 PE=4 SV=1)

HSP 1 Score: 819.3 bits (2115), Expect = 4.0e-234
Identity = 412/424 (97.17%), Postives = 417/424 (98.35%), Query Frame = 0


Query: 1   MGDEIFDAMNLDLNLGPIPEPLSNSVPNEDVNLADLTEESVHRFGETIRFRTRQRWRRRQ 60
           MGDE+FDAMNLDLNLGPIPEPLSNSVPNEDVNLADLTEE VHRFGETIRFRTRQRWRRRQ
Sbjct: 1   MGDEMFDAMNLDLNLGPIPEPLSNSVPNEDVNLADLTEEPVHRFGETIRFRTRQRWRRRQ 60

Query: 61  VQIPPETQNITMELSEIIVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALEDG 120
           VQIPPETQNITMELSEI+VNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALED 
Sbjct: 61  VQIPPETQNITMELSEIMVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALEDE 120

Query: 121 KTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKECPV 180
           KTENKSDVEKGSDSDGSFFDCNICLDL+RDPVVTCCGHLYCWPCLYRWLHLHSDAKECPV
Sbjct: 121 KTENKSDVEKGSDSDGSFFDCNICLDLARDPVVTCCGHLYCWPCLYRWLHLHSDAKECPV 180

Query: 181 CKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARKVESLRQTIQRTPFSFPVEDMI 240
           CKGEVTTKNVTPIYGRGSNTP TEEDATLKIP RPHARKVESLRQTIQRT FSFPVEDMI
Sbjct: 181 CKGEVTTKNVTPIYGRGSNTPATEEDATLKIPLRPHARKVESLRQTIQRTAFSFPVEDMI 240

Query: 241 RRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRERISLPHDDVGDLAHT 300
           RRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRE+ISLPHDDVGDLAHT
Sbjct: 241 RRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRREQISLPHDDVGDLAHT 300

Query: 301 DVSSIEAGETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGFLYTDPLIPRSQEQPPP 360
           DVSSIE GETRLQSLPVLRSLLHRTRVSSL SAFNSADRLP+GFLYTDPLIPRSQEQPPP
Sbjct: 301 DVSSIETGETRLQSLPVLRSLLHRTRVSSLASAFNSADRLPEGFLYTDPLIPRSQEQPPP 360

Query: 361 PVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAPRR 420
           PVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAPRR
Sbjct: 361 PVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAPRR 420

Query: 421 RRLA 425
           RRLA
Sbjct: 421 RRLA 424

[Close]

BLAST of CsaV3_3G038710.1 vs. TrEMBL
Match: tr|A0A2P4LIS6|A0A2P4LIS6_QUESU (E3 ubiquitin-protein ligase rma1h1 OS=Quercus suber OX=58331 GN=CFP56_05771 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 2.7e-142
Identity = 282/425 (66.35%), Postives = 324/425 (76.24%), Query Frame = 0


Query: 1   MGDEIFDAMNLDLNLGPIPEPLSNSVPNEDVNLADLTEESVHRFGETIRFRTRQRWRR-R 60
           MG+E  D MNLDLNLGP+PEP S+SV NE VNL  L     H   E IRFR RQRWRR R
Sbjct: 1   MGEETSDTMNLDLNLGPVPEPPSDSVSNEFVNLDHLINHPSHSLREAIRFRARQRWRRWR 60

Query: 61  QVQIPPETQNITMELSEIIVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALED 120
           Q+ IPPE QNI+MEL+E++VNSG+ ++   LQ GEGS+ AEER NE  KTCE NN  LED
Sbjct: 61  QIPIPPEAQNISMELNELMVNSGDTST---LQTGEGSVPAEERMNEVPKTCENNNGGLED 120

Query: 121 GKTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKECP 180
             +    DVEKGS +DGSFFDCNICLDLSRDPVVTCCGHL+CWPCLYRWLHLHSDA ECP
Sbjct: 121 ETSVKNDDVEKGSGNDGSFFDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHLHSDAGECP 180

Query: 181 VCKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARKVESLRQTIQRTPFSFPVEDM 240
           VCKGEV  K VTPIYGRG+     EED+ LKIP RP   +VESLRQ+IQRT ++FPVE+M
Sbjct: 181 VCKGEVQHKTVTPIYGRGNTVREPEEDSGLKIPCRPQGHRVESLRQSIQRTAYTFPVEEM 240

Query: 241 IRRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRERISLPHDDVGDLAH 300
           IRRLG RFD  RD   P EPDS+ ET  R+ +LLNRILTSR  R +    P DDV DL  
Sbjct: 241 IRRLGTRFDLTRDFIPPQEPDSTRETVERTNSLLNRILTSRARREQNQVAPPDDVVDLT- 300

Query: 301 TDVSSIEAGET-RLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGFLYTDPLIPRSQEQP 360
           +DVSS E GE  RLQ+L + R+  HRT +SSL+SA  SA+R  + +  + P   RSQE P
Sbjct: 301 SDVSSPETGENRRLQALYLRRAQAHRTTLSSLSSALTSAERYVESYFRSHP-GGRSQE-P 360

Query: 361 PPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAP 420
           P PV+DRDSFSSIAAVINSESQ+DTA+EIDSMVS+STSSSRRRNDA + SDVDSG+SRAP
Sbjct: 361 PQPVDDRDSFSSIAAVINSESQVDTAMEIDSMVSLSTSSSRRRNDASRSSDVDSGDSRAP 419

Query: 421 RRRRL 424
           RRRRL
Sbjct: 421 RRRRL 419

[Close]

BLAST of CsaV3_3G038710.1 vs. TrEMBL
Match: tr|A0A2I4E1G9|A0A2I4E1G9_9ROSI (uncharacterized protein LOC108985413 OS=Juglans regia OX=51240 GN=LOC108985413 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.0e-141
Identity = 279/429 (65.03%), Postives = 333/429 (77.62%), Query Frame = 0


Query: 1   MGDEIFDAMNLDLNLGPIPEPLSNSVPNEDVNLADLTEESVHRFGETIRFRTRQRWRR-R 60
           MG+E  D MNLDLNLGPIPEP   SVP + VNL D  E+   R  E IR R RQRWRR R
Sbjct: 1   MGEETSDTMNLDLNLGPIPEPQPGSVPTDPVNLDDWIEDPSDRLREAIRLRARQRWRRWR 60

Query: 61  QVQIPPETQNITMELSEIIVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALED 120
           Q QIPPE QNI++EL++++VNSG+ ++   LQ GEGS  A+ER NE  KTCE NN  +ED
Sbjct: 61  QFQIPPEAQNISLELNQLMVNSGDQST---LQTGEGSAPADERMNEVPKTCENNNGIIED 120

Query: 121 GKTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKECP 180
              E   D+EKGS +DGSFFDCNICLDL+RDPVVTCCGHL+CWPCLYRWLH+HS+AKECP
Sbjct: 121 ETAEKNDDIEKGSGNDGSFFDCNICLDLARDPVVTCCGHLFCWPCLYRWLHVHSEAKECP 180

Query: 181 VCKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARKVESLRQTIQRTPFSFPVEDM 240
           VCKGEVT K+VTP+YGRG+N    EED++LKIPPRPHAR+VES RQT+QRT F  PVE+M
Sbjct: 181 VCKGEVTIKSVTPVYGRGNNIREPEEDSSLKIPPRPHARRVESFRQTLQRTAF-LPVEEM 240

Query: 241 IRRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRERISLPHDDVGDLAH 300
           IRRLG RFD +RD  QP EPD ++ET  R+ +LLNRILTSR  RRE+  +P DDV DL  
Sbjct: 241 IRRLGGRFDLSRDFVQPQEPDGAHETVDRT-SLLNRILTSRA-RREQNLVPPDDVVDLTQ 300

Query: 301 TDVSSIEAG-----ETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGFLYTDPLIPRS 360
           +D+SS E G     ++R+QSL + RS  HRT + SL+SA +SA+RL D F + +  + R+
Sbjct: 301 SDMSSPEIGDNRRVQSRVQSLLLRRSHSHRTSLHSLSSALSSAERLVDAF-FRNQHVGRN 360

Query: 361 QEQPPPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGN 420
           QEQ P PV+DRDSFSSIAA INSESQMD A+EIDSMVS+STSSSRRRNDA + SDVDSG+
Sbjct: 361 QEQ-PQPVDDRDSFSSIAADINSESQMDNAMEIDSMVSLSTSSSRRRNDASRGSDVDSGD 420

Query: 421 SRAPRRRRL 424
           SRA RRRRL
Sbjct: 421 SRAHRRRRL 421

[Close]

BLAST of CsaV3_3G038710.1 vs. TrEMBL
Match: tr|A0A2I4GYD0|A0A2I4GYD0_9ROSI (uncharacterized protein LOC109011943 OS=Juglans regia OX=51240 GN=LOC109011943 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.2e-137
Identity = 280/425 (65.88%), Postives = 327/425 (76.94%), Query Frame = 0


Query: 1   MGDEIFDAMNLDLNLGPIPEPLSNSVPNEDVNLADLTEESVHRFGETIRFRTRQRWRR-R 60
           M +E  D MNLDLNLGPIPEP S SVPNE +NL D  E+   R  E IR R RQRWRR R
Sbjct: 1   MSEETSDTMNLDLNLGPIPEPQSGSVPNEPLNLDDWVEDPSGRLREAIRLRARQRWRRWR 60

Query: 61  QVQIPPETQNITMELSEIIVNSGNGNSLQPLQPGEGSITAEERKNETGKTCEINNEALED 120
            V IPPE QNI++EL++++VNSG+ ++   LQ GEGS  AEER NE  KTCE NN  LE+
Sbjct: 61  PVHIPPEAQNISLELNQLMVNSGDRST---LQTGEGSGPAEERINEIPKTCENNNGILEN 120

Query: 121 GKTENKSDVEKGSDSDGSFFDCNICLDLSRDPVVTCCGHLYCWPCLYRWLHLHSDAKECP 180
             +E   DVEKGS +DGSFFDCNICLDL+R+PVVTCCGHL+CW CLYRWLH+HSDAKECP
Sbjct: 121 EISEKNVDVEKGSGNDGSFFDCNICLDLARNPVVTCCGHLFCWACLYRWLHVHSDAKECP 180

Query: 181 VCKGEVTTKNVTPIYGRGSNTPVTEEDATLKIPPRPHARKVESLRQTIQRTPFSFPVEDM 240
           VCKGEVT K+VTPIYGRG+N   TEED++LKIP RPHAR++ESLRQT+ RT F FPVE+M
Sbjct: 181 VCKGEVTIKSVTPIYGRGNNIHETEEDSSLKIPHRPHARRIESLRQTLHRTAF-FPVEEM 240

Query: 241 IRRLGNRFDFNRDLDQPPEPDSSNETFGRSPTLLNRILTSRGIRRERISLPHDDVGDLAH 300
           IRRLG RFD +RD  QPPEPDS+ ET  R+ +LL+RILTSR  R +    P  DV DL  
Sbjct: 241 IRRLGGRFDLSRDFIQPPEPDSTRETVDRT-SLLSRILTSRARREQNSVAP--DVVDLTQ 300

Query: 301 TDVSSIEAGETR-LQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGFLYTDPLIPRSQEQP 360
           +D+SS E GE R +QSL + RS  HRT   SL SA +SA+RL D F    P + R+QEQ 
Sbjct: 301 SDMSSPEIGENRQVQSLLLRRSQSHRT---SLHSALSSAERLVDAFFRNHP-VGRNQEQ- 360

Query: 361 PPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRNDALQVSDVDSGNSRAP 420
           P PV+DRDSFSSIAA INSESQ+DTA+EIDSMVS+STSSSRRRND  + SDVDSG+SRA 
Sbjct: 361 PQPVDDRDSFSSIAAGINSESQVDTAMEIDSMVSLSTSSSRRRNDVSRGSDVDSGDSRAH 413

Query: 421 RRRRL 424
           RRRRL
Sbjct: 421 RRRRL 413

The following BLAST results are available for this feature:

BLAST of CsaV3_3G038710.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652084.1	5.1e-241	100.00	PREDICTED: uncharacterized protein LOC101220497 [Cucumis sativus] >KGN59290.1 hy...	[more]
XP_008443034.1	6.0e-234	97.17	PREDICTED: uncharacterized protein LOC103486753 [Cucumis melo]	[more]
XP_022982955.1	4.5e-221	92.96	uncharacterized protein LOC111481648 [Cucurbita maxima]	[more]
XP_023527653.1	2.2e-220	92.96	uncharacterized protein LOC111790817 [Cucurbita pepo subsp. pepo]	[more]
XP_022934283.1	3.2e-219	92.72	uncharacterized protein LOC111441493 [Cucurbita moschata]	[more]

BLAST of CsaV3_3G038710.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G58030.1	2.1e-108	53.57	RING/U-box superfamily protein	[more]
AT2G42030.1	4.1e-67	42.95	RING/U-box superfamily protein	[more]
AT2G44410.1	1.4e-27	46.76	RING/U-box superfamily protein	[more]
AT1G19310.1	7.0e-27	50.54	RING/U-box superfamily protein	[more]
AT2G23780.1	1.3e-25	46.73	RING/U-box superfamily protein	[more]

BLAST of CsaV3_3G038710.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q99942\|RNF5_HUMAN	1.3e-22	47.06	E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens OX=9606 GN=RNF5 PE=1 SV=1	[more]
sp\|O35445\|RNF5_MOUSE	2.9e-22	49.02	E3 ubiquitin-protein ligase RNF5 OS=Mus musculus OX=10090 GN=Rnf5 PE=1 SV=1	[more]
sp\|Q5M807\|RNF5_RAT	2.9e-22	49.02	E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus OX=10116 GN=Rnf5 PE=2 SV=1	[more]
sp\|Q6PC78\|RN185_DANRE	3.6e-20	48.24	E3 ubiquitin-protein ligase RNF185 OS=Danio rerio OX=7955 GN=rnf185 PE=2 SV=1	[more]
sp\|Q8GUK7\|RMA3_ARATH	8.0e-20	44.90	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV...	[more]

BLAST of CsaV3_3G038710.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LB96\|A0A0A0LB96_CUCSA	3.4e-241	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G806220 PE=4 SV=1	[more]
tr\|A0A1S3B7W0\|A0A1S3B7W0_CUCME	4.0e-234	97.17	uncharacterized protein LOC103486753 OS=Cucumis melo OX=3656 GN=LOC103486753 PE=...	[more]
tr\|A0A2P4LIS6\|A0A2P4LIS6_QUESU	2.7e-142	66.35	E3 ubiquitin-protein ligase rma1h1 OS=Quercus suber OX=58331 GN=CFP56_05771 PE=4...	[more]
tr\|A0A2I4E1G9\|A0A2I4E1G9_9ROSI	1.0e-141	65.03	uncharacterized protein LOC108985413 OS=Juglans regia OX=51240 GN=LOC108985413 P...	[more]
tr\|A0A2I4GYD0\|A0A2I4GYD0_9ROSI	1.2e-137	65.88	uncharacterized protein LOC109011943 OS=Juglans regia OX=51240 GN=LOC109011943 P...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR017907	Znf_RING_CS
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_3G038710	CsaV3_3G038710	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G038710.1.cds2	CsaV3_3G038710.1.cds2	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G038710.1.exon2	CsaV3_3G038710.1.exon2	exon
CsaV3_3G038710.1.exon1	CsaV3_3G038710.1.exon1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G038710.1	CsaV3_3G038710.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 141..181 e-value: 6.8E-8 score: 42.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 141..182 score: 13.124
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 141..186 e-value: 4.1E-8 score: 32.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 393..424
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 393..413
None	No IPR available	PANTHER	PTHR12313	RNF5	coord: 77..398
None	No IPR available	PANTHER	PTHR12313:SF0	E3 UBIQUITIN-PROTEIN LIGASE RNF185	coord: 77..398
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 139..183 e-value: 4.49644E-30 score: 109.316
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 137..194
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 119..205 e-value: 4.7E-18 score: 66.8
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 156..165