CsaV3_3G032550.1 (mRNA) Cucumber (Chinese Long) v3

NameCsaV3_3G032550.1
TypemRNA
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 28080115 .. 28081023 (+)
Sequence length279
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAAATTGGATGAATATAGAGTTGAAAATTCAATATTTGATGTGGGAAATTGATAATAACAATAAACAAATTGAAAATGTTTTAAATGGATCAATTGATCAAATAATTTCCATTACCATTACCAAAGAACAAAAGAATCATTCAAATAACAAATACAAATAATCAAAATTCACAAAACCAACCCTTCTAACTTTAACAAATAACATAAAATCAAATCACCCCTACTCTTTTCTCACTTTACATGACTAAGACTAAACCCAGAACAGGTCAATCGGAACCAATTCAATTCGATCCCATCCATTCGTCTCCTTACAACCTGCCACCATCATCGGAACGATCGCGACGAGCCGACGATGGAGTGGAAACTTTTGTCGACGGAGAAAGCTCACCACCGGGAGGAAGGTCAGAAAGAGCGGCCAGAAACCGGCGAATACTGACGGAACGAGCCGGTTTAAAGCTGAGAGATCTCACTTTCTGGTCGTTGGAGAAGAGATTGGAGGATTTGGAGAGAATCAAATAGACAAGAAGCTGAATAAAGACGAACATGGCGATTCTGACGAACATCTCGCCGGCGTCGGTATCGAAAATCGGCGTCATAGTGAAGGATTGAGGATGAAAAAATGCGAGATGAAACGTTGATCAGTCGATGGATGAAAAAGATGGGAGTGAAATTGGATACAGAAAAAGGAGGTTTTGAGGGTTTTTTATAGAGGGAGGAAGCTATTGACGGAGGTTCTTTGACCGTCTTAGCCGCCATGTTTGTAAGAGAGAGAGAGCTTGCAAGGAAGGTTCCACATCTTTAGGATAATATTTACGTGTTTTTAATTGCATATATTCAATTTGTTATTTTTTTAATAATTATTAACGTGATATTTCATTTCTAATGATTTTAAACTATAAAACTACA

mRNA sequence

ATGACTAAGACTAAACCCAGAACAGGTCAATCGGAACCAATTCAATTCGATCCCATCCATTCGTCTCCTTACAACCTGCCACCATCATCGGAACGATCGCGACGAGCCGACGATGGAGTGGAAACTTTTGTCGACGGAGAAAGCTCACCACCGGGAGGAAGGTCAGAAAGAGCGGCCAGAAACCGGCGAATACTGACGGAACGAGCCGGTTTAAAGCTGAGAGATCTCACTTTCTGGTCGTTGGAGAAGAGATTGGAGGATTTGGAGAGAATCAAATAG

Coding sequence (CDS)

ATGACTAAGACTAAACCCAGAACAGGTCAATCGGAACCAATTCAATTCGATCCCATCCATTCGTCTCCTTACAACCTGCCACCATCATCGGAACGATCGCGACGAGCCGACGATGGAGTGGAAACTTTTGTCGACGGAGAAAGCTCACCACCGGGAGGAAGGTCAGAAAGAGCGGCCAGAAACCGGCGAATACTGACGGAACGAGCCGGTTTAAAGCTGAGAGATCTCACTTTCTGGTCGTTGGAGAAGAGATTGGAGGATTTGGAGAGAATCAAATAG

Protein sequence

MTKTKPRTGQSEPIQFDPIHSSPYNLPPSSERSRRADDGVETFVDGESSPPGGRSERAARNRRILTERAGLKLRDLTFWSLEKRLEDLERIK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsaV3_3G032550CsaV3_3G032550gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_3G032550.1.exon1CsaV3_3G032550.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_3G032550.1.cds1CsaV3_3G032550.1.cds1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsaV3_3G032550.1CsaV3_3G032550.1-proteinpolypeptide


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29