CsaV3_3G025060.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G025060.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	DUF1645 family protein
Location	chr3 : 21980235 .. 21983169 (-)
Sequence length	843

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCCTTGATACAACTCTTTTAACCCCAATCTATTTCCTCTTTATTCATACCCTTATTCACAAACAAAAAAAAACAATCTAACCATTTTTTATTCTTAAAAATACATTGTTACTTACCCATATGAGTAATAAATAATGGTGGATGAGACCAAAAATCTTAAACATCAACTAAACCTTTTTTTTTTCTTTATTACACATTTTGAATGAATGGAAAACACAAGGATTGACTGGTTTGAATGAACGGGTTAATTGGAAAGAAGCGAAGTAGGTGGGTTCCGATTCGATGAATTAAACAAACATAAATTTCAAAATTGGAAACTTCCTAGTCGTCTCCACCAAGCAACAACCTTCATAAATACCCACTCACCCTCACGCGGTTATGCTTATACTTACCCTTTCCCCCTCCTCCTCCCCCTCTTCTTCAGACTCTCAACAAACAAATTCCCAATTTTCATTTCCCTCCTCCCAAACCCTAAAATCCGTCGCCAACATCAACCTCATCCAACCCCACCAGATGGAAACGGACCTCCAAATCGAATCCTTGGCTTTCCACGACAAATTAAACCTCCACAACTCTGAACAACATCAACTGGATGAAGAAAATGAAGATGATGAAGATTTCTCCTTTGTGTGCGCCAATCCTGATGCTTCCTCCCCAATCAGCGCCGACGATGCCTTCTATAACGGCCAGATCCGTCCCGTTTACCCACTCTTCAATCGGGACCTCCTCTTTGTAGACGAAACGCTTCCACCGCCCTTGAGGAAGGTGTTCCTGGAAAAGCCTGATACTGATCTCGCACCCATATCGGAGTCGGAGGGAGCTATTGAGGGCACCTACTGCGAGTGGTCTCCGGCTACGGCAGAGCTCGGGAAGAAGAGCAACTCCACTGGCTTCTCCAAGCTTTGGAGATTCCGGGACTTTATGACGGTGCACCGAAGCAGCAGTGATGGCAAAAACGCCTTCGTTTTCTTGAACAATAATCATCCCTCCTCCTCTACCTCTAGTTCCAGTTCCCCCAATTCTTCCTCCAAAAACAACAGCCCCCACAAGCAGCTTCAACAACCTCAAACATCATCCTCTCCCCATCGGACTCACTACGTTAATGGCAGAGCCCAGAAGAAGCAAGTCCACAAACACAAGTCCTATCTCCCCTACCGCCAGGATTTGGTTGGCTTCTTCACCACCGTCAATGGATTCACCAAAAATGTTCATCCTTTCTAATTCAATATTCGTTCATTCTTCCCTTACTTTATAATTTCTTGTAAATATTTCTACCCCAACAACCCTGAATTTTGGCATTAACAATGCAATACAATGCGATGCGACAGAACTTTAAATTCTTTGCTTTGTATATTCATTCTCCATTCTCTATTCTGTTGACACATATTGTGAACTTGTCTTATAAATTAGAGTGAGTGATTCTATTGCATTATGCATTCTGAAAATTTGCATCAAATCTAAAGTTGGAATATTGAAATTTTGGTAGACATTAGAGCAGAGAACATCAAAGGCTGAGCAATAGTTTAGGGATATTTACTGAAAATTACTTTTACAAAGTGAACATCAAAAGATGTATGTAGAAAGGCCAAACACAAGTAAATGGTTTGCATCTTAGTATTGTCCACTTAAATGATAACTTTCACCCAATTAATTTTAAAATTATATTGGGACTTTCCTCTTGGTATTCTCACAAGCTCACAATTGAATGGTAAAATATGAAGTTGAGATGTTTATTATGTTTGTCAAATGGACACGAGGGAAAGGTAAGCTAAGTTTTTCTGGAAGATTTTTAATTAATTAATTTTTTATATTATTCTTTTAATAAAACTACAAAATCTCATTGACTTGGGCCAGAAGTTTCCATAACAACTCAAAAAAAAAAAAAAAATGTAGTTTGTGCAAGAAGTTTCCATAACTCCAAAAAATGTAGTTTCCCAAGTCTTTGGTTCTACTGCAACCCTCACTTTCCATATTTTGGCAAAAAAAAAAGAATCAAGGAAAATAAGGTAAATATAGGATATTAATTTTTGAAAAAATGTTTTTGTCGTTAATTTCGTGGTAATAGTGTCAATAATTTGAGGTCTCTGTTTTAACTTATAGTCTCATTGTCTCTGTTTTAACTTATAGTCTCATTGCCAAGTTATAATTACGGATCGGATTTCAATTTATTTGTTCTATCATCCAAGTATAATTGTCTAAGCTTTGGATCGTTATCCTATTTGAACTGAACATCATGTCTATGTCAAACTCATCCCGCTCCAAGAAGACCTTGTTAGTTGTTATCCAATAACTTAAAACTAATAACATCCTTATCATGTTGCACTTCCCTCAACAAAATAGAATGACACAAAGGCTCGTTAAACACTATTTTAATGTTTGAAAATGACAAAAAAAATTGTTTGCTTGAAAATATACAACAATCTAAGTGTTAACTTCTTCTTTATGTTGGTGACGGTTTTAGCAAAATGGTAACAACATGTCAAATCGGTCTATAGAAGTAAAAAATGTGGGTTTTGATAACCAGTCATCTACAAAACGTAAAACATACAAAAAGCACGTAGAATATCCATTATAACATAAAACAAAAGAAAAAAAAAACAAACACACACATTTGTGAAGAATTTGTTTACAATCTTGGGACAAACTAGAGGAAAACCATGTCGAGAATGAGACATTTTATTTTATTAAAGAACTCGGGACATTTACACCAATATGCCATTAGATTAGTGTTTTTAATGCATTATGTGCAACATGTAAGGGACATTCTTGGGATAAATATAGTTGGAGTTCTCACACATAATGCATTAAAATTGACTATTTCATCCAACCTCAGTTAAGATTCATGACCATAACAGGCACACAGTGGGATAAAGTTACTGATTCATTGAATGAAAACCAACCTACATAATATCAAAACACAAAATATAAAATTAAA

mRNA sequence

ATGCTTATACTTACCCTTTCCCCCTCCTCCTCCCCCTCTTCTTCAGACTCTCAACAAACAAATTCCCAATTTTCATTTCCCTCCTCCCAAACCCTAAAATCCGTCGCCAACATCAACCTCATCCAACCCCACCAGATGGAAACGGACCTCCAAATCGAATCCTTGGCTTTCCACGACAAATTAAACCTCCACAACTCTGAACAACATCAACTGGATGAAGAAAATGAAGATGATGAAGATTTCTCCTTTGTGTGCGCCAATCCTGATGCTTCCTCCCCAATCAGCGCCGACGATGCCTTCTATAACGGCCAGATCCGTCCCGTTTACCCACTCTTCAATCGGGACCTCCTCTTTGTAGACGAAACGCTTCCACCGCCCTTGAGGAAGGTGTTCCTGGAAAAGCCTGATACTGATCTCGCACCCATATCGGAGTCGGAGGGAGCTATTGAGGGCACCTACTGCGAGTGGTCTCCGGCTACGGCAGAGCTCGGGAAGAAGAGCAACTCCACTGGCTTCTCCAAGCTTTGGAGATTCCGGGACTTTATGACGGTGCACCGAAGCAGCAGTGATGGCAAAAACGCCTTCGTTTTCTTGAACAATAATCATCCCTCCTCCTCTACCTCTAGTTCCAGTTCCCCCAATTCTTCCTCCAAAAACAACAGCCCCCACAAGCAGCTTCAACAACCTCAAACATCATCCTCTCCCCATCGGACTCACTACGTTAATGGCAGAGCCCAGAAGAAGCAAGTCCACAAACACAAGTCCTATCTCCCCTACCGCCAGGATTTGGTTGGCTTCTTCACCACCGTCAATGGATTCACCAAAAATGTTCATCCTTTCTAA

Coding sequence (CDS)

ATGCTTATACTTACCCTTTCCCCCTCCTCCTCCCCCTCTTCTTCAGACTCTCAACAAACAAATTCCCAATTTTCATTTCCCTCCTCCCAAACCCTAAAATCCGTCGCCAACATCAACCTCATCCAACCCCACCAGATGGAAACGGACCTCCAAATCGAATCCTTGGCTTTCCACGACAAATTAAACCTCCACAACTCTGAACAACATCAACTGGATGAAGAAAATGAAGATGATGAAGATTTCTCCTTTGTGTGCGCCAATCCTGATGCTTCCTCCCCAATCAGCGCCGACGATGCCTTCTATAACGGCCAGATCCGTCCCGTTTACCCACTCTTCAATCGGGACCTCCTCTTTGTAGACGAAACGCTTCCACCGCCCTTGAGGAAGGTGTTCCTGGAAAAGCCTGATACTGATCTCGCACCCATATCGGAGTCGGAGGGAGCTATTGAGGGCACCTACTGCGAGTGGTCTCCGGCTACGGCAGAGCTCGGGAAGAAGAGCAACTCCACTGGCTTCTCCAAGCTTTGGAGATTCCGGGACTTTATGACGGTGCACCGAAGCAGCAGTGATGGCAAAAACGCCTTCGTTTTCTTGAACAATAATCATCCCTCCTCCTCTACCTCTAGTTCCAGTTCCCCCAATTCTTCCTCCAAAAACAACAGCCCCCACAAGCAGCTTCAACAACCTCAAACATCATCCTCTCCCCATCGGACTCACTACGTTAATGGCAGAGCCCAGAAGAAGCAAGTCCACAAACACAAGTCCTATCTCCCCTACCGCCAGGATTTGGTTGGCTTCTTCACCACCGTCAATGGATTCACCAAAAATGTTCATCCTTTCTAA

Protein sequence

MLILTLSPSSSPSSSDSQQTNSQFSFPSSQTLKSVANINLIQPHQMETDLQIESLAFHDKLNLHNSEQHQLDEENEDDEDFSFVCANPDASSPISADDAFYNGQIRPVYPLFNRDLLFVDETLPPPLRKVFLEKPDTDLAPISESEGAIEGTYCEWSPATAELGKKSNSTGFSKLWRFRDFMTVHRSSSDGKNAFVFLNNNHPSSSTSSSSSPNSSSKNNSPHKQLQQPQTSSSPHRTHYVNGRAQKKQVHKHKSYLPYRQDLVGFFTTVNGFTKNVHPF

Homology

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BLAST of CsaV3_3G025060.1 vs. NCBI nr
Match: KGN58068.1 (hypothetical protein Csa_3G483770 [Cucumis sativus])

HSP 1 Score: 463.4 bits (1191), Expect = 5.5e-127
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MLILTLSPSSXXXXXXXXQTNSQFSFPSSQTLKSVANINLIQPHQMETDLQIESLAFHDK 60
           MLILTLSPSSXXXXXXXXQTNSQFSFPSSQTLKSVANINLIQPHQMETDLQIESLAFHDK
Sbjct: 1   MLILTLSPSSXXXXXXXXQTNSQFSFPSSQTLKSVANINLIQPHQMETDLQIESLAFHDK 60

Query: 61  LNLHNSEQHQLDEENEDDEDFSFVCANPDASSPISADDAFYNGQIRPVYPLFNRDLLFVD 120
           LNLHNSEQHQLDEENEDDEDFSFVCANPDASSPISADDAFYNGQIRPVYPLFNRDLLFVD
Sbjct: 61  LNLHNSEQHQLDEENEDDEDFSFVCANPDASSPISADDAFYNGQIRPVYPLFNRDLLFVD 120

Query: 121 ETLPPPLRKVFLEKPDTDLAPISESEGAIEGTYCEWSPATAELGKKSNSTGFSKLWRFRD 180
           ETLPPPLRKVFLEKPDTDLAPISESEGAIEGTYCEWSPATAELGKKSNSTGFSKLWRFRD
Sbjct: 121 ETLPPPLRKVFLEKPDTDLAPISESEGAIEGTYCEWSPATAELGKKSNSTGFSKLWRFRD 180

Query: 181 FMTVHRSSSDGKNAFVFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHRTHY 240
           FMTVHRSSSDGKNAFVFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHRTHY
Sbjct: 181 FMTVHRSSSDGKNAFVFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHRTHY 240

Query: 241 VNGRAQKKQVHKHKSYLPYRQDLVGFFTTVNGFTKNVHPF 281
           VNGRAQKKQVHKHKSYLPYRQDLVGFFTTVNGFTKNVHPF
Sbjct: 241 VNGRAQKKQVHKHKSYLPYRQDLVGFFTTVNGFTKNVHPF 280

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BLAST of CsaV3_3G025060.1 vs. NCBI nr
Match: XP_011651496.1 (PREDICTED: uncharacterized protein LOC105434905 [Cucumis sativus])

HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-107
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 46  METDLQIESLAFHDKLNLHNSEQHQLDEENEDDEDFSFVCANPDASSPISADDAFYNGQI 105
           METDLQIESLAFHDKLNLHNSEQHQLDEENEDDEDFSFVCANPDASSPISADDAFYNGQI
Sbjct: 1   METDLQIESLAFHDKLNLHNSEQHQLDEENEDDEDFSFVCANPDASSPISADDAFYNGQI 60

Query: 106 RPVYPLFNRDLLFVDETLPPPLRKVFLEKPDTDLAPISESEGAIEGTYCEWSPATAELGK 165
           RPVYPLFNRDLLFVDETLPPPLRKVFLEKPDTDLAPISESEGAIEGTYCEWSPATAELGK
Sbjct: 61  RPVYPLFNRDLLFVDETLPPPLRKVFLEKPDTDLAPISESEGAIEGTYCEWSPATAELGK 120

Query: 166 KSNSTGFSKLWRFRDFMTVHRSSSDGKNAFVFLXXXXXXXXXXXXXXXXXXXXXXXXXXX 225
           KSNSTGFSKLWRFRDFMTVHRSSSDGKNAFVFLXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 KSNSTGFSKLWRFRDFMTVHRSSSDGKNAFVFLXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 226 XXXXXXXXXPHRTHYVNGRAQKKQVHKHKSYLPYRQDLVGFFTTVNGFTKNVHPF 281
           XXXXXXXXXPHRTHYVNGRAQKKQVHKHKSYLPYRQDLVGFFTTVNGFTKNVHPF
Sbjct: 181 XXXXXXXXXPHRTHYVNGRAQKKQVHKHKSYLPYRQDLVGFFTTVNGFTKNVHPF 235

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BLAST of CsaV3_3G025060.1 vs. NCBI nr
Match: XP_008447506.1 (PREDICTED: uncharacterized protein LOC103489939 [Cucumis melo])

HSP 1 Score: 362.1 bits (928), Expect = 1.7e-96
Identity = 220/251 (87.65%), Postives = 229/251 (91.24%), Query Frame = 0


Query: 38  INLIQPHQMETDLQIESLAFHDKLNLHNSEQHQLDEENEDDEDFSFVCANPDASSPISAD 97
           +NL QP  +E+DLQ+ESLAFHDKLNLHN EQ   DEE+E DEDFSFVC NPDASSPISAD
Sbjct: 1   MNLAQPQHIESDLQVESLAFHDKLNLHNGEQ---DEEDEGDEDFSFVCVNPDASSPISAD 60

Query: 98  DAFYNGQIRPVYPLFNRDLLFVDETLPPPLRKVFLEKPDTDLAPISESEGAIEGTYCEWS 157
           DAFYNGQIRPVYPLF+RDLLFVDETLPPPLRKVF+EKPDTDLA +SESEGA EGTYCEWS
Sbjct: 61  DAFYNGQIRPVYPLFDRDLLFVDETLPPPLRKVFVEKPDTDLASVSESEGATEGTYCEWS 120

Query: 158 PATAELGKKSNSTGFSKLWRFRDFMTVHRSSSDGKNAFVFL--------XXXXXXXXXXX 217
           PATAELGKKSNSTGFSKLWRFRDFMTVHRSSSDGKNAFVFL        XXXXXXXXXXX
Sbjct: 121 PATAELGKKSNSTGFSKLWRFRDFMTVHRSSSDGKNAFVFLSNNHPSXXXXXXXXXXXXX 180

Query: 218 XXXXXXXXXXXXXXXXXXXXXXXXXPHRTHYVNGRAQKKQVHKHKSYLPYRQDLVGFFTT 277
           XXXXXXXXXXXXXXXXXXX XXXXXPH+THYV  RAQKKQVHKHKSYLPYRQDLVGFFTT
Sbjct: 181 XXXXXXXXXXXXXXXXXXXPXXXXXPHQTHYVKSRAQKKQVHKHKSYLPYRQDLVGFFTT 240

Query: 278 VNGFTKNVHPF 281
           VNGFTKNVHPF
Sbjct: 241 VNGFTKNVHPF 248

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BLAST of CsaV3_3G025060.1 vs. NCBI nr
Match: XP_022961773.1 (uncharacterized protein LOC111462443 [Cucurbita moschata])

HSP 1 Score: 251.5 bits (641), Expect = 3.3e-63
Identity = 177/258 (68.60%), Postives = 191/258 (74.03%), Query Frame = 0


Query: 39  NLIQPHQMETDLQIESLAFHDKLNLHNSEQHQLDEENEDDEDFSFVCANPDASSPISADD 98
           N     QME DL  ESLAF DKL +   E            +FSFVCANP+ SSPI+ADD
Sbjct: 38  NSSHAEQMERDL--ESLAFDDKLRV---EDGXXXXXXXXXXEFSFVCANPNGSSPITADD 97

Query: 99  AFYNGQIRPVYPLFNRDLLFVD----ETLPPPLRKVFLEKPDTDLAPIS------ESEGA 158
           AFYNGQIRPVYPLFNRDLL VD    E+L PPLRKVF+EK DT LAP S      E EG 
Sbjct: 98  AFYNGQIRPVYPLFNRDLLLVDEKDSESLRPPLRKVFMEKRDT-LAPKSELELKLEVEGV 157

Query: 159 IEGTYCEWSPATAELGKKSNSTGFSKLWRFRDFMTVHRSSSDGKNAFVFL------XXXX 218
           +EGTYCEWSP+ A LG+KSNSTGFSKLWRFR+FM +HRSSSDGK+A+VFL          
Sbjct: 158 VEGTYCEWSPSAAGLGEKSNSTGFSKLWRFREFMKMHRSSSDGKDAYVFLSKPSSSSSPK 217

Query: 219 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHRTHYVNGRAQKKQVHKHKSYLPYRQD 278
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    H THYV  RAQ  Q HK KSYLPYRQD
Sbjct: 218 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASAHETHYVRSRAQ-NQAHKRKSYLPYRQD 277

Query: 279 LVGFFTTVNGFTKNVHPF 281
           LVGFFTTVNGF+KNVHPF
Sbjct: 278 LVGFFTTVNGFSKNVHPF 288

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BLAST of CsaV3_3G025060.1 vs. NCBI nr
Match: XP_022951849.1 (uncharacterized protein LOC111454581 [Cucurbita moschata])

HSP 1 Score: 238.8 bits (608), Expect = 2.2e-59
Identity = 163/255 (63.92%), Postives = 182/255 (71.37%), Query Frame = 0


Query: 48  TDLQIESLAFHDKLNLHNSEQHQLDEENEDDEDFSFVCANPDASSPISADDAFYNGQIRP 107
           T   +ESLAFHD+L LH       D   E DE+FSFVCANP+  SPI+ADDAF+NGQIRP
Sbjct: 11  TKPDLESLAFHDRLQLH-------DAYEEQDEEFSFVCANPN-DSPINADDAFFNGQIRP 70

Query: 108 VYPLFNRDLLFVD----ET------LPPPLRKVFLEKPDTDLAPISESEGAIEGTYCEWS 167
           VYPLF+R LLFVD    ET      L PPLRK+F+EK        +E EG +EGTYCEWS
Sbjct: 71  VYPLFDRSLLFVDGQDPETPDNPPLLRPPLRKLFVEK---QFESDTELEGVVEGTYCEWS 130

Query: 168 PATAELGKKSNSTGFSKLWRFRDFMTVHRSSSDGKNAFVFL------------XXXXXXX 227
           P TAELGKKSNSTGFSKLWRFR+FMT+ RSSSDGK+AFVFL            XXXXXXX
Sbjct: 131 PTTAELGKKSNSTGFSKLWRFREFMTMRRSSSDGKDAFVFLXXXXXXXXXXXXXXXXXXX 190

Query: 228 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHRTHYVNGRAQKKQVHKHKSYLPYRQDLVG 281
           XXXXXXXXXXXXXXXXX             H  HYV  RAQ KQV K +SYLPYRQDL+G
Sbjct: 191 XXXXXXXXXXXXXXXXXKLNRLKAQTASSAHEIHYVRSRAQ-KQVDKRRSYLPYRQDLLG 250

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BLAST of CsaV3_3G025060.1 vs. TAIR10
Match: AT1G23710.1 (Protein of unknown function (DUF1645))

HSP 1 Score: 135.2 bits (339), Expect = 6.3e-32
Identity = 147/306 (48.04%), Postives = 183/306 (59.80%), Query Frame = 0


Query: 23  QFSFPSSQTLKSVANINLIQPHQMETDLQIESLAFHD------KLNLHNSEQHQLDEENE 82
           + +FPSS  +K +A+  L      E  +    L F +      KL    S+  +  E NE
Sbjct: 2   EVAFPSSPPVKCIADERL-----TEISMDFTKLGFPEEDEEIKKLERSWSKLEESVEFNE 61

Query: 83  ----DDEDFSFVCANPDASSPISADDAFYNGQIRPVYPLFNRDLLF-------------V 142
                   FSF C N +  SPI+AD+AF +GQIRPV+PLFNRDLLF             V
Sbjct: 62  XXXXXXXXFSFACVNGE-GSPITADEAFEDGQIRPVFPLFNRDLLFEYENEDDKNDNVSV 121

Query: 143 DETLPPPLRKVFLEKPDTDLAPISESEGAIE---GTYCEW-----SPATAELGKKSNSTG 202
            +   P LRK+F+E  + +     E+EG+ +   G YC W     + A+ E  +KSNSTG
Sbjct: 122 TDENRPRLRKLFVEDRNGN-GDGEETEGSEKEPLGPYCSWTGGTVAEASPETCRKSNSTG 181

Query: 203 FSKLWRFRDFMTVHRSSSDGKNAFVFL-----------------XXXXXXXXXXXXXXXX 262
           FSKLWRFRD   V RS+SDG++AFVFL                 XXXXXXXXXXXXXXXX
Sbjct: 182 FSKLWRFRDL--VLRSNSDGRDAFVFLNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 241

Query: 263 XXXXXXXXXXXXXXXXXXXXPHRTHYVNGRAQKKQVHKHKSYLPYRQDLVGFFTTVNGFT 281
           XXXXXXXXXXXXXXXXXXXX H   Y+  RA K++V KH+SYLPY+Q  VGFFT VNG +
Sbjct: 242 XXXXXXXXXXXXXXXXXXXXXHEKLYMRNRAMKEEV-KHRSYLPYKQ--VGFFTNVNGLS 295

[Close]

BLAST of CsaV3_3G025060.1 vs. TAIR10
Match: AT1G70420.1 (Protein of unknown function (DUF1645))

HSP 1 Score: 130.2 bits (326), Expect = 2.0e-30
Identity = 124/230 (53.91%), Postives = 150/230 (65.22%), Query Frame = 0


Query: 68  QHQLDEENED-DEDFSFVCANPDASSPISADDAFYNGQIRPVYPLFNRDLLFVD---ETL 127
           Q+  D+++E  +EDFSF   N D +SPI+AD+AF +GQIRPVYPLFNR++ F D   +TL
Sbjct: 52  QNGTDKDDEGREEDFSFASVNAD-NSPITADEAFEDGQIRPVYPLFNRNIFFDDPEEKTL 111

Query: 128 PPPLRKVFLEKPDTDLAPISESEGAIEGTYCEWSPATAELG-----KKSNSTGFSKLWRF 187
             PL+K+F                   G YC W+  T E       +KSNSTGFSKLWRF
Sbjct: 112 RSPLKKLF---XXXXXXXXXXXXXXTVGPYCSWTNRTVEQASPETCRKSNSTGFSKLWRF 171

Query: 188 RDFMTVHRSSSDGKNAFVFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHRT 247
           RD   V RS+SDGK+AFVFL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    
Sbjct: 172 RDL--VLRSNSDGKDAFVFLSNGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 231

Query: 248 H--------YVNGRAQKKQVHKHKSYLPYRQDLVGFFTTVNGFTKNVHPF 281
                    Y+  RA +++  K +SYLPY+   VGFFT VNG T+NVHP+
Sbjct: 232 XXXXXXEKLYMRNRAMREE-GKRRSYLPYKH--VGFFTNVNGLTRNVHPY 272

[Close]

BLAST of CsaV3_3G025060.1 vs. TAIR10
Match: AT5G62770.1 (Protein of unknown function (DUF1645))

HSP 1 Score: 80.1 bits (196), Expect = 2.4e-15
Identity = 73/261 (27.97%), Postives = 110/261 (42.15%), Query Frame = 0


Query: 52  IESLAFHDKLNLHNSEQHQLDEENEDDEDFSFVCANPDASSPI-SADDAFYNGQIRPVYP 111
           +E    HD+    +S       ++++D DF+F C +   S P+ +AD+ F NGQIRP+ P
Sbjct: 33  VEEFRDHDQTQSDSSPH----RDDDNDSDFAFDCPSNTCSQPLATADEIFCNGQIRPLNP 92

Query: 112 LFNRDLLFVD-----ETLPPPLRKVFLEK---PDTDLAPISESE------GAIEGTYCEW 171
                 +         TLPP  R+  L K    D D A  S SE      G    TYC W
Sbjct: 93  YGGNAPVESQPTSKITTLPPRRRRPALRKLMSEDRDPASNSSSEAEEDLTGVPPETYCVW 152

Query: 172 SPATAELGK---------------KSNSTGFSKLWRFRDFMTVHRSSSDGKNAFVFLXXX 231
            P  +  G                KS+S GFSK W+ R+ + V RSSS+G +  VF    
Sbjct: 153 KPKQSNSGDDDLQRLSSSPSHSKIKSHSAGFSKRWKLRNLLYV-RSSSEGNDKLVF---- 212

Query: 232 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHRTHYVNG--RAQKKQVHKHKSYLPY 281
                                           X      V+G    ++++  K ++Y+PY
Sbjct: 213 ----------------PAPVKKNDETVSDQREXXXXXSKVDGEEEGREREETKRQTYVPY 268

[Close]

BLAST of CsaV3_3G025060.1 vs. TAIR10
Match: AT3G27880.1 (Protein of unknown function (DUF1645))

HSP 1 Score: 63.2 bits (152), Expect = 3.0e-10
Identity = 81/221 (36.65%), Postives = 107/221 (48.42%), Query Frame = 0


Query: 89  DASSPISADDAFYNGQIRPVYPLFNRDLLFVDETLPP--PLRKVFLEK------------ 148
           DA    S      +G    V+P+FN++L+  D +     PL+ +FL +            
Sbjct: 36  DAEFEFSTAATSSSGDGGLVFPVFNKNLISGDVSPEKVIPLKDLFLRERXXXXXXXXXXX 95

Query: 149 -PDTDLAPISESEGAIEGTYCEWSPA--TAELG-----KKSNSTGFS-------KLWRFR 208
                       +      YC W+PA  TA++      +KS STG S       K WR R
Sbjct: 96  XXXXXXXXXXXFDSIPSEIYCPWTPARSTADMSPSGGCRKSKSTGSSXXXXWSTKRWRLR 155

Query: 209 DFMTVHRSSSDGKNAFVFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHRTH 268
           DF+   RS SDGK +  FL                XXXXXXXXXXXXXXXXXXXX H   
Sbjct: 156 DFL--KRSKSDGKQSLKFL-----------NPTNRXXXXXXXXXXXXXXXXXXXXXHEKF 215

Query: 269 YVNGRAQKKQVHKHKSYLPYRQDLVGFFTTVNGFTKNVHPF 281
           Y+  +A K++  K KSYLPY+QDLVG F+ ++ + K   PF
Sbjct: 216 YLRNKAIKEE-DKRKSYLPYKQDLVGLFSNIHRYGKTFPPF 242

[Close]

BLAST of CsaV3_3G025060.1 vs. TrEMBL
Match: tr|A0A0A0L8F3|A0A0A0L8F3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G483770 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 3.7e-127
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MLILTLSPSSXXXXXXXXQTNSQFSFPSSQTLKSVANINLIQPHQMETDLQIESLAFHDK 60
           MLILTLSPSSXXXXXXXXQTNSQFSFPSSQTLKSVANINLIQPHQMETDLQIESLAFHDK
Sbjct: 1   MLILTLSPSSXXXXXXXXQTNSQFSFPSSQTLKSVANINLIQPHQMETDLQIESLAFHDK 60

Query: 61  LNLHNSEQHQLDEENEDDEDFSFVCANPDASSPISADDAFYNGQIRPVYPLFNRDLLFVD 120
           LNLHNSEQHQLDEENEDDEDFSFVCANPDASSPISADDAFYNGQIRPVYPLFNRDLLFVD
Sbjct: 61  LNLHNSEQHQLDEENEDDEDFSFVCANPDASSPISADDAFYNGQIRPVYPLFNRDLLFVD 120

Query: 121 ETLPPPLRKVFLEKPDTDLAPISESEGAIEGTYCEWSPATAELGKKSNSTGFSKLWRFRD 180
           ETLPPPLRKVFLEKPDTDLAPISESEGAIEGTYCEWSPATAELGKKSNSTGFSKLWRFRD
Sbjct: 121 ETLPPPLRKVFLEKPDTDLAPISESEGAIEGTYCEWSPATAELGKKSNSTGFSKLWRFRD 180

Query: 181 FMTVHRSSSDGKNAFVFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHRTHY 240
           FMTVHRSSSDGKNAFVFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHRTHY
Sbjct: 181 FMTVHRSSSDGKNAFVFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHRTHY 240

Query: 241 VNGRAQKKQVHKHKSYLPYRQDLVGFFTTVNGFTKNVHPF 281
           VNGRAQKKQVHKHKSYLPYRQDLVGFFTTVNGFTKNVHPF
Sbjct: 241 VNGRAQKKQVHKHKSYLPYRQDLVGFFTTVNGFTKNVHPF 280

[Close]

BLAST of CsaV3_3G025060.1 vs. TrEMBL
Match: tr|A0A1S3BI77|A0A1S3BI77_CUCME (uncharacterized protein LOC103489939 OS=Cucumis melo OX=3656 GN=LOC103489939 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.2e-96
Identity = 220/251 (87.65%), Postives = 229/251 (91.24%), Query Frame = 0


Query: 38  INLIQPHQMETDLQIESLAFHDKLNLHNSEQHQLDEENEDDEDFSFVCANPDASSPISAD 97
           +NL QP  +E+DLQ+ESLAFHDKLNLHN EQ   DEE+E DEDFSFVC NPDASSPISAD
Sbjct: 1   MNLAQPQHIESDLQVESLAFHDKLNLHNGEQ---DEEDEGDEDFSFVCVNPDASSPISAD 60

Query: 98  DAFYNGQIRPVYPLFNRDLLFVDETLPPPLRKVFLEKPDTDLAPISESEGAIEGTYCEWS 157
           DAFYNGQIRPVYPLF+RDLLFVDETLPPPLRKVF+EKPDTDLA +SESEGA EGTYCEWS
Sbjct: 61  DAFYNGQIRPVYPLFDRDLLFVDETLPPPLRKVFVEKPDTDLASVSESEGATEGTYCEWS 120

Query: 158 PATAELGKKSNSTGFSKLWRFRDFMTVHRSSSDGKNAFVFL--------XXXXXXXXXXX 217
           PATAELGKKSNSTGFSKLWRFRDFMTVHRSSSDGKNAFVFL        XXXXXXXXXXX
Sbjct: 121 PATAELGKKSNSTGFSKLWRFRDFMTVHRSSSDGKNAFVFLSNNHPSXXXXXXXXXXXXX 180

Query: 218 XXXXXXXXXXXXXXXXXXXXXXXXXPHRTHYVNGRAQKKQVHKHKSYLPYRQDLVGFFTT 277
           XXXXXXXXXXXXXXXXXXX XXXXXPH+THYV  RAQKKQVHKHKSYLPYRQDLVGFFTT
Sbjct: 181 XXXXXXXXXXXXXXXXXXXPXXXXXPHQTHYVKSRAQKKQVHKHKSYLPYRQDLVGFFTT 240

Query: 278 VNGFTKNVHPF 281
           VNGFTKNVHPF
Sbjct: 241 VNGFTKNVHPF 248

[Close]

BLAST of CsaV3_3G025060.1 vs. TrEMBL
Match: tr|A0A2P4M2P4|A0A2P4M2P4_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_78088 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 7.6e-40
Identity = 135/238 (56.72%), Postives = 149/238 (62.61%), Query Frame = 0


Query: 85  CANPDASSPISADDAFYNGQIRPVYPLFNRDLLF-----------VDE-TLPPPLRKVFL 144
           C NPD  SPISADD F NGQIRP++P+FNRDLLF           VD  +L PPLRK+F+
Sbjct: 84  CTNPD-GSPISADDVFVNGQIRPIFPIFNRDLLFSGGYDGDLKSKVDSLSLRPPLRKLFV 143

Query: 145 EKPDTDLAPISES---EGAIEGTYCEWSPATA----------ELGKKSNSTGFSKLWRFR 204
           E+ D      SES   EG    TYCEWS A A          EL KKSNSTGFSKLWRFR
Sbjct: 144 EERDGSSESASESDELEGVPAETYCEWSGAAAVGGKAVEASPELCKKSNSTGFSKLWRFR 203

Query: 205 DFMTVHRSSSDGKNAFVFL-----------------XXXXXXXXXXXXXXXXXXXXXXXX 264
           D   VHRS+SDGK+AFVFL                 XXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 204 DL--VHRSNSDGKDAFVFLNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 263

Query: 265 XXXXXXXXXXXXPHRTHYVNGRAQKKQVHKHKSYLPYRQDLVGFFTTVNGFTKNVHPF 281
                        H  HYV+ RA K++  K KSYLPYRQDLVGFFT VNG ++NVHPF
Sbjct: 264 EAKGKVKTASLSAHEKHYVSSRA-KREGEKRKSYLPYRQDLVGFFTNVNGLSRNVHPF 317

[Close]

BLAST of CsaV3_3G025060.1 vs. TrEMBL
Match: tr|A0A2N9ILI6|A0A2N9ILI6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54379 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.9e-39
Identity = 131/236 (55.51%), Postives = 146/236 (61.86%), Query Frame = 0


Query: 85  CANPDASSPISADDAFYNGQIRPVYPLFNRDLLFVDE------------TLPPPLRKVFL 144
           C NPD  SPISADD F NGQIRP++P+FNRDLLF D              L PPLRK+F+
Sbjct: 87  CTNPD-GSPISADDIFVNGQIRPIFPIFNRDLLFGDNYIGDSRSKEDSLALRPPLRKLFV 146

Query: 145 EKPDTDLAPIS------ESEGAIEGTYCEWS-----PATAELGKKSNSTGFSKLWRFRDF 204
           E+ D  L   S      E E    GTYC+WS      A+ EL KK NSTGFSKLWRFRD 
Sbjct: 147 EERDPSLPSSSSASESDELEQVPAGTYCDWSGGKAVEASPELSKKCNSTGFSKLWRFRDL 206

Query: 205 MTVHRSSSDGKNAFVFL-----------------XXXXXXXXXXXXXXXXXXXXXXXXXX 264
             VHRS+SDGK+AFVFL                              XXXXXXXXXXXXX
Sbjct: 207 --VHRSNSDGKDAFVFLNHSSATAKPSNETAKKNDKSVKKVSGVENNXXXXXXXXXXXXX 266

Query: 265 XXXXXXXXXXPHRTHYVNGRAQKKQVHKHKSYLPYRQDLVGFFTTVNGFTKNVHPF 281
           XXXXXXXXXX H  HYV+ RA K++  K KSYLPYRQDLVGFFT VNG ++NVHPF
Sbjct: 267 XXXXXXXXXXXHERHYVSNRA-KREGDKRKSYLPYRQDLVGFFTNVNGLSRNVHPF 318

[Close]

BLAST of CsaV3_3G025060.1 vs. TrEMBL
Match: tr|A0A251R353|A0A251R353_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G253100 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.9e-38
Identity = 125/311 (40.19%), Postives = 147/311 (47.27%), Query Frame = 0


Query: 3   ILTLSPSSXXXXXXXXQTNSQFSFPSSQTLK---SVANINLIQPHQMETDLQIESLAFHD 62
           +L+LSPS            +Q S   S  LK   S ++           D + E     +
Sbjct: 6   VLSLSPSFNSYDSKNEFEYAQLSANFSSKLKIAGSGSDFEFNDTKPAALDNEKEKPETEE 65

Query: 63  KLNLHNSEQHQLDEENEDDEDFSFVCANPDASSPISADDAFYNGQIRPVYPLFNRDLLFV 122
              + N++     E+NED++DFSFVC NPD  SPISADD F NGQIRPVYP+FNRDLLF 
Sbjct: 66  SEGVQNADAGGDCEKNEDEDDFSFVCTNPD-GSPISADDIFQNGQIRPVYPIFNRDLLFA 125

Query: 123 DE----------------TLPPPLRKVFLEKPDTDLAPISES---EGAIEGTYCEWSPAT 182
           D                             + DT  +  SES   EG  EGTYCEWS  T
Sbjct: 126 DSDDGDXXXXXXXXXXXXXXXXXXXXXXXXERDTPSSSASESDELEGVPEGTYCEWSRKT 185

Query: 183 A----ELGKKSNSTGFSKLWRFRDFMTVHRSSSDGKNAFVFL-------XXXXXXXXXXX 242
                EL  KSNSTG SKLWR RD     RS+SDGK+AFVFL                  
Sbjct: 186 VVVAPELKNKSNSTGSSKLWRVRDLKL--RSNSDGKDAFVFLNPNSTTTSPKPSQETADN 245

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXPHRTHYVNGRAQKKQVHKHKSYLPYRQDLVGFFTT 281
                                     H  HYV  RA KK+  K +SYLPYRQDLVGFFT 
Sbjct: 246 KSGAKIVKTVEKVKGKVKKAETVSSAHEKHYVMNRA-KKEGDKRRSYLPYRQDLVGFFTN 305

The following BLAST results are available for this feature:

BLAST of CsaV3_3G025060.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN58068.1	5.5e-127	100.00	hypothetical protein Csa_3G483770 [Cucumis sativus]	[more]
XP_011651496.1	1.3e-107	100.00	PREDICTED: uncharacterized protein LOC105434905 [Cucumis sativus]	[more]
XP_008447506.1	1.7e-96	87.65	PREDICTED: uncharacterized protein LOC103489939 [Cucumis melo]	[more]
XP_022961773.1	3.3e-63	68.60	uncharacterized protein LOC111462443 [Cucurbita moschata]	[more]
XP_022951849.1	2.2e-59	63.92	uncharacterized protein LOC111454581 [Cucurbita moschata]	[more]

BLAST of CsaV3_3G025060.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G23710.1	6.3e-32	48.04	Protein of unknown function (DUF1645)	[more]
AT1G70420.1	2.0e-30	53.91	Protein of unknown function (DUF1645)	[more]
AT5G62770.1	2.4e-15	27.97	Protein of unknown function (DUF1645)	[more]
AT3G27880.1	3.0e-10	36.65	Protein of unknown function (DUF1645)	[more]

BLAST of CsaV3_3G025060.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G025060.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L8F3\|A0A0A0L8F3_CUCSA	3.7e-127	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G483770 PE=4 SV=1	[more]
tr\|A0A1S3BI77\|A0A1S3BI77_CUCME	1.2e-96	87.65	uncharacterized protein LOC103489939 OS=Cucumis melo OX=3656 GN=LOC103489939 PE=...	[more]
tr\|A0A2P4M2P4\|A0A2P4M2P4_QUESU	7.6e-40	56.72	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_78088 PE=4 SV=1	[more]
tr\|A0A2N9ILI6\|A0A2N9ILI6_FAGSY	2.9e-39	55.51	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54379 PE=4 SV=1	[more]
tr\|A0A251R353\|A0A251R353_PRUPE	1.9e-38	40.19	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G253100 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR012442	DUF1645_plant

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_3G025060	CsaV3_3G025060	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G025060.1.cds1	CsaV3_3G025060.1.cds1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G025060.1.exon1	CsaV3_3G025060.1.exon1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G025060.1	CsaV3_3G025060.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012442	Protein of unknown function DUF1645, plant	PFAM	PF07816	DUF1645	coord: 96..258 e-value: 3.7E-20 score: 73.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..238
None	No IPR available	PANTHER	PTHR33095:SF3	SUBFAMILY NOT NAMED	coord: 41..280
None	No IPR available	PANTHER	PTHR33095	FAMILY NOT NAMED	coord: 41..280