CsaV3_3G021140.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G021140.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Transmembrane protein
Location	chr3 : 17772922 .. 17776071 (+)
Sequence length	564

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAACAAGAAGTTATAAAATGGTAAGAGAAAGAAAAGAAAAGAAAAGAAAATGTGAATGGTTATGATCCATTGGTGAAAGGGAAGGCGAAGGGGACGGGGGAGGATAGAGAGAGAAGAAAAGATAGGACTGAATTGAATCGACACACAAACAATCAAAACACTTAACAAAGTCTTCTCTCTTCCATTCTCTTCTCTCAAACCCAAACAAAAAACTTTTCTCCTTTCTTCAAACCCTTCATCCATGGCGTCGCCTCTCTTTCTCCTCTTTCTCTTCACAATTTCCTTCTCAATTCCATCTCAAGCTCGTCCTTGCAAATCCCTTTTCCTTTCCTTTTCCCTTCACCGTCACCGAACCCTCGATTCCCCCCATCCCTTCTCCCAGATGGCCATTATCGTCGACATCACCGAATTCAAATCTTCCTCCTTTTCCTCTTCTCCCGATCCCCTTTTCCCCTCCGTCGCCGACCCCACCGACATCCTCCGCTTCGATCTCCCTCGTCCTACCCCTGTTTCAGCATCAACCCAACACTTCCCTTACGATTTCACCTCTCTCCGTGATCGCACCAAGGATATTCTCAGCGTTGTTGTCGCTTTGCTCTTCGGCGTTGGCTGTGGCGCTCTCACTGCTGCCACTATGTATTTGGCTTACTCTTTGTTTGCTGGTCAATTTGGGCATCGCTCCTCTGTGTATGATGACTTTGGGGAGGATGAGGATGATCTCAGTGATGATAACAAGGAGAATATTAAGAAGATGGGTTATATCAACATCCCTGACGACGTTGCCCCCGTTAAATCAGTGGTATAATCATTTATACATATGTTTCGTAACCTTGGTTTGTTCCATCTTATGATCCAAATTATACTTAATGTTCGATTTCTGTATTGTAATTTGTCTAAGTTTCCAACGTAACTTCTCTGCCATATTATGTGAAAACTATGTTGTTAATTGTCATTTTTCTTTGAAAAATGTGTTTGTAAACATTATGCTTCCTTGTTGGATTTCAATTGGACGTTTCAATGTCTTTGCATTTTACTTCCCATGGCGTTGATCGATTAGGGGAGAGTATATATAATAGGGCCACAGGTTTCAAAGTTGTGTTTTTCGATTAAACTTCATTTGGGATTTTTCTATCTTGTAATGTAACCCTCACCTTTCCATTTCTTACTATTATGTTACTGTTTTTATTACTTTTCTGGTTTAGACCTTGAACCAATTAGATTTTGTTCATCGTTTCTTTTTCTCTGGTTGAATGCTCACTATTCGATTTGAGTAGATGTAGTGATCAATTGGAGCAATCTCTATGCTATGATCTTGAAGTTATGGTTCAAGGGATGGTTGCTAATGCTACCTATTAATGTTTTTACATATTGTTTCTTTAATGTCAAATATCGTAGCGTTTGATGGTTGTCTCACAGGGTTAGACAACGTGCACGGTGTGCTCAGCAGATATTTTAACTGGAGGATCCCTACTTAACTGTTGACTTGTGTTGGACTTCATCAGCCCTTCCCTTATATATGCTCTCTTTTCAGTTCAACTTTTTTTAATTAATTTTTTAATCTATTTACAGGGACCTGTATTTTTAGACCTCTCTAATGGTTACTTCTTCACAAAATTATTAATTTAAGGTTAAGTATTCCTCATGTGATGGCATGATAAAAGTTTCATTTCATTTTGGTTTTATACTGCCACAGTATTGTTATTATAATTTCGTCAGCTCTGGAAGTGGTAAATGTCTTGTTTAATATTGTACTACCAACGAATGCCCTTTTATTTTAATAGCATGTGGAGCAGTTGATACTGGTCTAAGAAAAGACCTTACCTATAAATTATAATTCTACACTATCAAGTACTTAATTATTCCTGTAGTTCATAAGTTCAGGCTATGAGAATTCCAGAAAAGATTTATTTCATGATAAACATATTGGCTTATAATCTGCTCGACTGCCTAGAGCCTTCCCTGTTGCTTTCCTTTCCTTTTTTAGTATCTTTCTTCTCCTTTCTTCCATTTGAACTAGTGTTGGCCTATTTCTTTAAAGTTGTGGAATAATTATTGAACTTGCCCTTCTTTATCAATCTTTGTAAACCATGTTGTAGGGTTTTGCTCTCTTGTGTAGAATGGAATGATATGGAGAGACAAATCGCCTTGTGAATGTTAAAGTTTTTCTGTTAAGTAGGTTGCAGGAAGGTAATAGTTATCGCACAAGAAAGGACTAGACCTAAGAACAGAAAGATCGGAGCTTTAGTGATGTGACTTTGCGAGTGGAGTTTGGGATTCCAGTTTTTTGGACGTTTGGTGTGATTACTGTTTGTCATAGAGATGTCAGTTCTATGAGTTTCTACTCAATCCACCTTTTTGGGAGAGAGCCCGGTTTCTTATAGGTTCTGTAGGGCAGGTGGAATAGTAGGGTGTTTAGAGGAGTTGAGTGGGATCATAGGGAGTTTTGATCTTTGATTTCATGTTTCCCTCTGAAGTTTCATTTCAAATACCTTTTCTAATTATTCTATAGACGTGATTTCACATAGTTGGAGCTCCTGTAGTGGAGTACTTCCCTCTTTTTGGGCTTGGTTTTTTTTATATGCATGTGTATTCTTTCTCAATGAAAGTCGTCATTTTTGTTTTAAAGAAATAAATTGAAGTTCACAACTTTGGGTGAGACATCCTTCCGGTATGAAAGCTATCATTTTCTTAACTTCCCTTTCTTTAAGGTCCCACCCGAGTTGGTCCCTGTAGACGGCTATATAAGGAAAATAAATTCCAAAAGAACCCAAGTTGGGCAGTTAGTTCCAAACTGTTTAAAGGCTATATCTTCAAGTGGAGGAACTCAAAATATTTTTCCACTGCAATATTTACGCCAGAAGACAACAATTTTGTAGATTTCTTTGAAAATTGATCTGTGGTTTGAAGTACTTTTAGGTTGGCTGTGGCAGATGAAAAACCTTCAAGTGTGCGGCCTGAGCTCTTTTAAACAGTATGAGTGATTTCAATTTCTTGGATCATATTCAATTGGCCAACATTAGAAATAATAAAGTTTGAGAATAATAGTGCAATTCTTATTGCCTTTACTGAGAAATGAGGCCATGAAGGGCCATGGAACAAGATACTCGTCTTTTGGATCAACGATAGGATTTTAATTTTAATTGCTAA

mRNA sequence

ATGGCGTCGCCTCTCTTTCTCCTCTTTCTCTTCACAATTTCCTTCTCAATTCCATCTCAAGCTCGTCCTTGCAAATCCCTTTTCCTTTCCTTTTCCCTTCACCGTCACCGAACCCTCGATTCCCCCCATCCCTTCTCCCAGATGGCCATTATCGTCGACATCACCGAATTCAAATCTTCCTCCTTTTCCTCTTCTCCCGATCCCCTTTTCCCCTCCGTCGCCGACCCCACCGACATCCTCCGCTTCGATCTCCCTCGTCCTACCCCTGTTTCAGCATCAACCCAACACTTCCCTTACGATTTCACCTCTCTCCGTGATCGCACCAAGGATATTCTCAGCGTTGTTGTCGCTTTGCTCTTCGGCGTTGGCTGTGGCGCTCTCACTGCTGCCACTATGTATTTGGCTTACTCTTTGTTTGCTGGTCAATTTGGGCATCGCTCCTCTGTGTATGATGACTTTGGGGAGGATGAGGATGATCTCAGTGATGATAACAAGGAGAATATTAAGAAGATGGGTTATATCAACATCCCTGACGACGTTGCCCCCGTTAAATCAGTGGGTTAG

Coding sequence (CDS)

ATGGCGTCGCCTCTCTTTCTCCTCTTTCTCTTCACAATTTCCTTCTCAATTCCATCTCAAGCTCGTCCTTGCAAATCCCTTTTCCTTTCCTTTTCCCTTCACCGTCACCGAACCCTCGATTCCCCCCATCCCTTCTCCCAGATGGCCATTATCGTCGACATCACCGAATTCAAATCTTCCTCCTTTTCCTCTTCTCCCGATCCCCTTTTCCCCTCCGTCGCCGACCCCACCGACATCCTCCGCTTCGATCTCCCTCGTCCTACCCCTGTTTCAGCATCAACCCAACACTTCCCTTACGATTTCACCTCTCTCCGTGATCGCACCAAGGATATTCTCAGCGTTGTTGTCGCTTTGCTCTTCGGCGTTGGCTGTGGCGCTCTCACTGCTGCCACTATGTATTTGGCTTACTCTTTGTTTGCTGGTCAATTTGGGCATCGCTCCTCTGTGTATGATGACTTTGGGGAGGATGAGGATGATCTCAGTGATGATAACAAGGAGAATATTAAGAAGATGGGTTATATCAACATCCCTGACGACGTTGCCCCCGTTAAATCAGTGGGTTAG

Protein sequence

MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSSSFSSSPDPLFPSVADPTDILRFDLPRPTPVSASTQHFPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDNKENIKKMGYINIPDDVAPVKSVG

Homology

[Close]

BLAST of CsaV3_3G021140.1 vs. NCBI nr
Match: XP_004145840.1 (PREDICTED: uncharacterized protein LOC101219659 [Cucumis sativus] >KGN57805.1 hypothetical protein Csa_3G313200 [Cucumis sativus])

HSP 1 Score: 368.2 bits (944), Expect = 1.6e-98
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS 60
           MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS
Sbjct: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS 60

Query: 61  SFSSSPDPLFPSVADPTDILRFDLPRPTPVSASTQHFPYDFTSLRDRTKDILSVVVALLF 120
           SFSSSPDPLFPSVADPTDILRFDLPRPTPVSASTQHFPYDFTSLRDRTKDILSVVVALLF
Sbjct: 61  SFSSSPDPLFPSVADPTDILRFDLPRPTPVSASTQHFPYDFTSLRDRTKDILSVVVALLF 120

Query: 121 GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDNKENIKKMGYINIPDDV 180
           GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDNKENIKKMGYINIPDDV
Sbjct: 121 GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDNKENIKKMGYINIPDDV 180

Query: 181 APVKSVG 188
           APVKSVG
Sbjct: 181 APVKSVG 187

[Close]

BLAST of CsaV3_3G021140.1 vs. NCBI nr
Match: XP_008457043.1 (PREDICTED: uncharacterized protein LOC103496817 isoform X2 [Cucumis melo])

HSP 1 Score: 362.8 bits (930), Expect = 6.8e-97
Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS 60
           MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS
Sbjct: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS 60

Query: 61  SFSSSPDPLFPSVADPTDILRFDLPRPTPVSASTQHFPYDFTSLRDRTKDILSVVVALLF 120
           SFSSS DPLFPSVADPTDILRFDLPRPTPVSA+TQHFPYDFTSLRDRTKDILSVVVALLF
Sbjct: 61  SFSSSSDPLFPSVADPTDILRFDLPRPTPVSATTQHFPYDFTSLRDRTKDILSVVVALLF 120

Query: 121 GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDNKENIKKMGYINIPDDV 180
           GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGED+DDLSDDNKENIKKMGYINIPDDV
Sbjct: 121 GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDDDDLSDDNKENIKKMGYINIPDDV 180

Query: 181 APVKSVG 188
           APVKSVG
Sbjct: 181 APVKSVG 187

[Close]

BLAST of CsaV3_3G021140.1 vs. NCBI nr
Match: XP_008457044.1 (PREDICTED: uncharacterized protein LOC103496817 isoform X3 [Cucumis melo])

HSP 1 Score: 362.8 bits (930), Expect = 6.8e-97
Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS 60
           MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS
Sbjct: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS 60

Query: 61  SFSSSPDPLFPSVADPTDILRFDLPRPTPVSASTQHFPYDFTSLRDRTKDILSVVVALLF 120
           SFSSS DPLFPSVADPTDILRFDLPRPTPVSA+TQHFPYDFTSLRDRTKDILSVVVALLF
Sbjct: 61  SFSSSSDPLFPSVADPTDILRFDLPRPTPVSATTQHFPYDFTSLRDRTKDILSVVVALLF 120

Query: 121 GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDNKENIKKMGYINIPDDV 180
           GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGED+DDLSDDNKENIKKMGYINIPDDV
Sbjct: 121 GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDDDDLSDDNKENIKKMGYINIPDDV 180

Query: 181 APVKSVG 188
           APVKSVG
Sbjct: 181 APVKSVG 187

[Close]

BLAST of CsaV3_3G021140.1 vs. NCBI nr
Match: XP_008457042.1 (PREDICTED: uncharacterized protein LOC103496817 isoform X1 [Cucumis melo])

HSP 1 Score: 360.5 bits (924), Expect = 3.4e-96
Identity = 183/186 (98.39%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS 60
           MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS
Sbjct: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS 60

Query: 61  SFSSSPDPLFPSVADPTDILRFDLPRPTPVSASTQHFPYDFTSLRDRTKDILSVVVALLF 120
           SFSSS DPLFPSVADPTDILRFDLPRPTPVSA+TQHFPYDFTSLRDRTKDILSVVVALLF
Sbjct: 61  SFSSSSDPLFPSVADPTDILRFDLPRPTPVSATTQHFPYDFTSLRDRTKDILSVVVALLF 120

Query: 121 GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDNKENIKKMGYINIPDDV 180
           GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGED+DDLSDDNKENIKKMGYINIPDDV
Sbjct: 121 GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDDDDLSDDNKENIKKMGYINIPDDV 180

Query: 181 APVKSV 187
           APVKSV
Sbjct: 181 APVKSV 186

[Close]

BLAST of CsaV3_3G021140.1 vs. NCBI nr
Match: XP_022983562.1 (uncharacterized protein LOC111482129 [Cucurbita maxima])

HSP 1 Score: 248.4 bits (633), Expect = 1.9e-62
Identity = 142/187 (75.94%), Postives = 150/187 (80.21%), Query Frame = 0


Query: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDS-PHPFSQMAIIVDITEFKS 60
           MAS LFLL L TIS S+ S ARPCKSLF+SFSL RHRTLDS  HPFS+MA+IVDITEFKS
Sbjct: 1   MASRLFLLLLLTISLSLSSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKS 60

Query: 61  SSFSSSPDPLFPSVADPTDILRFDLPRPTPVSASTQHFPYDFTSLRDRTKDILSVVVALL 120
           SS S            P DIL  DLPRP P S   QHFPYDFTSLRDRTKDIL+VVVALL
Sbjct: 61  SSLSV-----------PDDILLLDLPRPRPHSLH-QHFPYDFTSLRDRTKDILTVVVALL 120

Query: 121 FGVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDNKENIKKMGYINIPDD 180
           FGVGCGALTAATMYLAYSL AG+FG+RSSVYDD  E+EDD SDDNKENIKKMGYI I DD
Sbjct: 121 FGVGCGALTAATMYLAYSLCAGRFGNRSSVYDD-SEEEDDFSDDNKENIKKMGYIKITDD 174

Query: 181 VAPVKSV 187
            APVKSV
Sbjct: 181 SAPVKSV 174

[Close]

BLAST of CsaV3_3G021140.1 vs. TAIR10
Match: AT1G65720.1 (unknown protein)

HSP 1 Score: 70.9 bits (172), Expect = 9.7e-13
Identity = 65/188 (34.57%), Postives = 91/188 (48.40%), Query Frame = 0


Query: 1   MASPLFLLFLFTI----SFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITE 60
           M S  +L F   +    S +  + ARPCK+ FL  S     T ++P+  S       +T 
Sbjct: 1   MTSSSYLRFAIAVVAFLSITTITTARPCKT-FLISSYSLSITPENPNLESDFTSTRFVTV 60

Query: 61  FKSSSFSSSPDPLFPSVADPTDILRFDLPR--PTPVSASTQHFPY---DFTSLRDRTKDI 120
           F                 +P  ++ F + R    P   S +  P    +  S RDRT+DI
Sbjct: 61  FTIRRL------------NPHHVVPFFVNRRHEKPQIQSDRSLPLISDNINSFRDRTRDI 120

Query: 121 LSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDNKE--NIK 178
           LSVVVALLFGVGCGALTAATMYL ++L   +  +      DF E+E        +  ++K
Sbjct: 121 LSVVVALLFGVGCGALTAATMYLVWALVVNRQSY------DFEEEEXXXXXXXSDAASLK 169

[Close]

BLAST of CsaV3_3G021140.1 vs. TrEMBL
Match: tr|A0A0A0L741|A0A0A0L741_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G313200 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.1e-98
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS 60
           MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS
Sbjct: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS 60

Query: 61  SFSSSPDPLFPSVADPTDILRFDLPRPTPVSASTQHFPYDFTSLRDRTKDILSVVVALLF 120
           SFSSSPDPLFPSVADPTDILRFDLPRPTPVSASTQHFPYDFTSLRDRTKDILSVVVALLF
Sbjct: 61  SFSSSPDPLFPSVADPTDILRFDLPRPTPVSASTQHFPYDFTSLRDRTKDILSVVVALLF 120

Query: 121 GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDNKENIKKMGYINIPDDV 180
           GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDNKENIKKMGYINIPDDV
Sbjct: 121 GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDNKENIKKMGYINIPDDV 180

Query: 181 APVKSVG 188
           APVKSVG
Sbjct: 181 APVKSVG 187

[Close]

BLAST of CsaV3_3G021140.1 vs. TrEMBL
Match: tr|A0A1S3C4K4|A0A1S3C4K4_CUCME (uncharacterized protein LOC103496817 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496817 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 4.5e-97
Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS 60
           MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS
Sbjct: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS 60

Query: 61  SFSSSPDPLFPSVADPTDILRFDLPRPTPVSASTQHFPYDFTSLRDRTKDILSVVVALLF 120
           SFSSS DPLFPSVADPTDILRFDLPRPTPVSA+TQHFPYDFTSLRDRTKDILSVVVALLF
Sbjct: 61  SFSSSSDPLFPSVADPTDILRFDLPRPTPVSATTQHFPYDFTSLRDRTKDILSVVVALLF 120

Query: 121 GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDNKENIKKMGYINIPDDV 180
           GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGED+DDLSDDNKENIKKMGYINIPDDV
Sbjct: 121 GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDDDDLSDDNKENIKKMGYINIPDDV 180

Query: 181 APVKSVG 188
           APVKSVG
Sbjct: 181 APVKSVG 187

[Close]

BLAST of CsaV3_3G021140.1 vs. TrEMBL
Match: tr|A0A1S3C4P1|A0A1S3C4P1_CUCME (uncharacterized protein LOC103496817 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496817 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 4.5e-97
Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS 60
           MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS
Sbjct: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS 60

Query: 61  SFSSSPDPLFPSVADPTDILRFDLPRPTPVSASTQHFPYDFTSLRDRTKDILSVVVALLF 120
           SFSSS DPLFPSVADPTDILRFDLPRPTPVSA+TQHFPYDFTSLRDRTKDILSVVVALLF
Sbjct: 61  SFSSSSDPLFPSVADPTDILRFDLPRPTPVSATTQHFPYDFTSLRDRTKDILSVVVALLF 120

Query: 121 GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDNKENIKKMGYINIPDDV 180
           GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGED+DDLSDDNKENIKKMGYINIPDDV
Sbjct: 121 GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDDDDLSDDNKENIKKMGYINIPDDV 180

Query: 181 APVKSVG 188
           APVKSVG
Sbjct: 181 APVKSVG 187

[Close]

BLAST of CsaV3_3G021140.1 vs. TrEMBL
Match: tr|A0A1S3C467|A0A1S3C467_CUCME (uncharacterized protein LOC103496817 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496817 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 2.2e-96
Identity = 183/186 (98.39%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS 60
           MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS
Sbjct: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDSPHPFSQMAIIVDITEFKSS 60

Query: 61  SFSSSPDPLFPSVADPTDILRFDLPRPTPVSASTQHFPYDFTSLRDRTKDILSVVVALLF 120
           SFSSS DPLFPSVADPTDILRFDLPRPTPVSA+TQHFPYDFTSLRDRTKDILSVVVALLF
Sbjct: 61  SFSSSSDPLFPSVADPTDILRFDLPRPTPVSATTQHFPYDFTSLRDRTKDILSVVVALLF 120

Query: 121 GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDNKENIKKMGYINIPDDV 180
           GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGED+DDLSDDNKENIKKMGYINIPDDV
Sbjct: 121 GVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDDDDLSDDNKENIKKMGYINIPDDV 180

Query: 181 APVKSV 187
           APVKSV
Sbjct: 181 APVKSV 186

[Close]

BLAST of CsaV3_3G021140.1 vs. TrEMBL
Match: tr|A0A2C9WBZ6|A0A2C9WBZ6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G082600 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.5e-23
Identity = 89/202 (44.06%), Postives = 116/202 (57.43%), Query Frame = 0


Query: 1   MASP---LFLLFLFTISFSIPSQARPCKSLFL---SFSL-----HRHRTLDSPHPFSQMA 60
           MASP   L LLF      S+ + ARPCK+LF+   SFS+       +   D       + 
Sbjct: 1   MASPIPKLLLLFSILSFISLSASARPCKTLFISSYSFSIKPLYPKPNSNFDRRSSSGFVT 60

Query: 61  IIVDITEFKSSSFSSSPDPLFPSV-----ADPTDILRFDLPRPTPVSASTQHFPYDFTSL 120
           I+ +IT+  SSS      P+FP+V     ++P  I R       P   S+    YD +SL
Sbjct: 61  IVTEITQQHSSSEIFLDRPVFPAVDHYDTSEPQGIQRRQEGPVLPFGISS----YDMSSL 120

Query: 121 RDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDN 180
           RDRTKDILSVVVALLFGVGCGALTAATMYL +SLF+ ++ +R   +D  GED D+  D +
Sbjct: 121 RDRTKDILSVVVALLFGVGCGALTAATMYLVWSLFSTRYDYRYEEFD--GEDVDEADDVS 180

Query: 181 KENIKKMGYINIPDDVAPVKSV 187
               KKMGY+ IP+ V+  K V
Sbjct: 181 P---KKMGYVKIPEAVSMPKQV 193

The following BLAST results are available for this feature:

BLAST of CsaV3_3G021140.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145840.1	1.6e-98	100.00	PREDICTED: uncharacterized protein LOC101219659 [Cucumis sativus] >KGN57805.1 hy...	[more]
XP_008457043.1	6.8e-97	98.40	PREDICTED: uncharacterized protein LOC103496817 isoform X2 [Cucumis melo]	[more]
XP_008457044.1	6.8e-97	98.40	PREDICTED: uncharacterized protein LOC103496817 isoform X3 [Cucumis melo]	[more]
XP_008457042.1	3.4e-96	98.39	PREDICTED: uncharacterized protein LOC103496817 isoform X1 [Cucumis melo]	[more]
XP_022983562.1	1.9e-62	75.94	uncharacterized protein LOC111482129 [Cucurbita maxima]	[more]

BLAST of CsaV3_3G021140.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65720.1	9.7e-13	34.57	unknown protein	[more]

BLAST of CsaV3_3G021140.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G021140.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L741\|A0A0A0L741_CUCSA	1.1e-98	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G313200 PE=4 SV=1	[more]
tr\|A0A1S3C4K4\|A0A1S3C4K4_CUCME	4.5e-97	98.40	uncharacterized protein LOC103496817 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3C4P1\|A0A1S3C4P1_CUCME	4.5e-97	98.40	uncharacterized protein LOC103496817 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3C467\|A0A1S3C467_CUCME	2.2e-96	98.39	uncharacterized protein LOC103496817 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2C9WBZ6\|A0A2C9WBZ6_MANES	1.5e-23	44.06	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G082600 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_3G021140	CsaV3_3G021140	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G021140.1.exon1	CsaV3_3G021140.1.exon1	exon
CsaV3_3G021140.1.exon2	CsaV3_3G021140.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G021140.1.cds1	CsaV3_3G021140.1.cds1	CDS
CsaV3_3G021140.1.cds2	CsaV3_3G021140.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G021140.1	CsaV3_3G021140.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35107	FAMILY NOT NAMED	coord: 7..179