CsaV3_2G032020.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G032020.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Rho guanine nucleotide exchange factor
Location	chr2 : 21144026 .. 21144877 (-)
Sequence length	852

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCTCCATAAGCTTAGAAGAACTCCATCTTTACCACTCCATTGACAGAGAAATCTTCTCCCGTTTACTCATTCAACTCTCTCGAGACCCCGCCCAGTCTCTTCTAATCATTTCTCTTTGGCTATGGCTTGAAGAACAAGGCGTCACCAATTTCATTTTCAGAATCATGCCTCTCTCCGACCCTTCATTGAATTCTCTAGCCAATGAAGCTGTTTTCTGTCTCAGCTGCTTAGATTCCAACAACCAACCCGGCTGCCCCCACCCCACCACCGTGCTTCCGGCCACCTCCAAGGCGGCCGGAAGAGATATTCCGGTTGAAATGTTTGTCCAAAACCGTTTCAGAGCAATCAGTGGGGTGAAGTACTTTCTCACCAATGTCTGTGCTCGGATTTTCACCGACATTTTGGAGATTGTTTTGGGTAGAAATAATTCTCAACCGAATGAGGCTTTAGTGATTCATGGATTCCCGCATCCGATTTTTGGTTCGATCACAATCATCCCAAAATCCTTGGATCAAGACTTCCCGACCGGTGGGTTGTGGGGGTGGCCGTCAGCGGACGCCGGCATGTCGGAAGACGACCGGACTCTGTTTCTAACATTTTCACGAGGCTTTCCGGTGACGGCAGAGGAGGTGAAGGGGCTATTTGTACAGGCGTTTGGAGATTGTGTTGAGAGTATTCAGATGGAGGAAGTTGAGGCCGGGGAGCAGCCGTTGTATGCTCGAATGGTGATGAGTTCGGTGGTCCCCGTCGATCAGATTCTCGACGGGAAGCGAATTGCTAAGTTCCGTATTAATGGGAAACACATTTGGGCTCGAAAGTATGAGAGAAGATCGGAGTTATTGATGTGA

mRNA sequence

ATGCCCTCCATAAGCTTAGAAGAACTCCATCTTTACCACTCCATTGACAGAGAAATCTTCTCCCGTTTACTCATTCAACTCTCTCGAGACCCCGCCCAGTCTCTTCTAATCATTTCTCTTTGGCTATGGCTTGAAGAACAAGGCGTCACCAATTTCATTTTCAGAATCATGCCTCTCTCCGACCCTTCATTGAATTCTCTAGCCAATGAAGCTGTTTTCTGTCTCAGCTGCTTAGATTCCAACAACCAACCCGGCTGCCCCCACCCCACCACCGTGCTTCCGGCCACCTCCAAGGCGGCCGGAAGAGATATTCCGGTTGAAATGTTTGTCCAAAACCGTTTCAGAGCAATCAGTGGGGTGAAGTACTTTCTCACCAATGTCTGTGCTCGGATTTTCACCGACATTTTGGAGATTGTTTTGGGTAGAAATAATTCTCAACCGAATGAGGCTTTAGTGATTCATGGATTCCCGCATCCGATTTTTGGTTCGATCACAATCATCCCAAAATCCTTGGATCAAGACTTCCCGACCGGTGGGTTGTGGGGGTGGCCGTCAGCGGACGCCGGCATGTCGGAAGACGACCGGACTCTGTTTCTAACATTTTCACGAGGCTTTCCGGTGACGGCAGAGGAGGTGAAGGGGCTATTTGTACAGGCGTTTGGAGATTGTGTTGAGAGTATTCAGATGGAGGAAGTTGAGGCCGGGGAGCAGCCGTTGTATGCTCGAATGGTGATGAGTTCGGTGGTCCCCGTCGATCAGATTCTCGACGGGAAGCGAATTGCTAAGTTCCGTATTAATGGGAAACACATTTGGGCTCGAAAGTATGAGAGAAGATCGGAGTTATTGATGTGA

Coding sequence (CDS)

ATGCCCTCCATAAGCTTAGAAGAACTCCATCTTTACCACTCCATTGACAGAGAAATCTTCTCCCGTTTACTCATTCAACTCTCTCGAGACCCCGCCCAGTCTCTTCTAATCATTTCTCTTTGGCTATGGCTTGAAGAACAAGGCGTCACCAATTTCATTTTCAGAATCATGCCTCTCTCCGACCCTTCATTGAATTCTCTAGCCAATGAAGCTGTTTTCTGTCTCAGCTGCTTAGATTCCAACAACCAACCCGGCTGCCCCCACCCCACCACCGTGCTTCCGGCCACCTCCAAGGCGGCCGGAAGAGATATTCCGGTTGAAATGTTTGTCCAAAACCGTTTCAGAGCAATCAGTGGGGTGAAGTACTTTCTCACCAATGTCTGTGCTCGGATTTTCACCGACATTTTGGAGATTGTTTTGGGTAGAAATAATTCTCAACCGAATGAGGCTTTAGTGATTCATGGATTCCCGCATCCGATTTTTGGTTCGATCACAATCATCCCAAAATCCTTGGATCAAGACTTCCCGACCGGTGGGTTGTGGGGGTGGCCGTCAGCGGACGCCGGCATGTCGGAAGACGACCGGACTCTGTTTCTAACATTTTCACGAGGCTTTCCGGTGACGGCAGAGGAGGTGAAGGGGCTATTTGTACAGGCGTTTGGAGATTGTGTTGAGAGTATTCAGATGGAGGAAGTTGAGGCCGGGGAGCAGCCGTTGTATGCTCGAATGGTGATGAGTTCGGTGGTCCCCGTCGATCAGATTCTCGACGGGAAGCGAATTGCTAAGTTCCGTATTAATGGGAAACACATTTGGGCTCGAAAGTATGAGAGAAGATCGGAGTTATTGATGTGA

Protein sequence

MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLSDPSLNSLANEAVFCLSCLDSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISGVKYFLTNVCARIFTDILEIVLGRNNSQPNEALVIHGFPHPIFGSITIIPKSLDQDFPTGGLWGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGEQPLYARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELLM

Homology

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BLAST of CsaV3_2G032020.1 vs. NCBI nr
Match: KGN62945.1 (hypothetical protein Csa_2G381710 [Cucumis sativus])

HSP 1 Score: 575.1 bits (1481), Expect = 1.3e-160
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 1   MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS 60
           MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS
Sbjct: 1   MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS 60

Query: 61  DPSLNSLANEAVFCLSCLDSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISGV 120
           DPSLNSLANEAVFCLSCLDSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISGV
Sbjct: 61  DPSLNSLANEAVFCLSCLDSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISGV 120

Query: 121 KYFLTNVCARIFTDILEIVLGRNNSQPNEALVIHGFPHPIFGSITIIPKSLDQDFPTGGL 180
           KYFLTNVCARIFTDILEIVLGRNNSQPNEALVIHGFPHPIFGSITIIPKSLDQDFPTGGL
Sbjct: 121 KYFLTNVCARIFTDILEIVLGRNNSQPNEALVIHGFPHPIFGSITIIPKSLDQDFPTGGL 180

Query: 181 WGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGEQPLY 240
           WGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGEQPLY
Sbjct: 181 WGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGEQPLY 240

Query: 241 ARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELLM 284
           ARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELLM
Sbjct: 241 ARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELLM 283

[Close]

BLAST of CsaV3_2G032020.1 vs. NCBI nr
Match: XP_004138857.2 (PREDICTED: uncharacterized protein LOC101208140 [Cucumis sativus])

HSP 1 Score: 575.1 bits (1481), Expect = 1.3e-160
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 1   MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS 60
           MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS
Sbjct: 95  MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS 154

Query: 61  DPSLNSLANEAVFCLSCLDSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISGV 120
           DPSLNSLANEAVFCLSCLDSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISGV
Sbjct: 155 DPSLNSLANEAVFCLSCLDSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISGV 214

Query: 121 KYFLTNVCARIFTDILEIVLGRNNSQPNEALVIHGFPHPIFGSITIIPKSLDQDFPTGGL 180
           KYFLTNVCARIFTDILEIVLGRNNSQPNEALVIHGFPHPIFGSITIIPKSLDQDFPTGGL
Sbjct: 215 KYFLTNVCARIFTDILEIVLGRNNSQPNEALVIHGFPHPIFGSITIIPKSLDQDFPTGGL 274

Query: 181 WGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGEQPLY 240
           WGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGEQPLY
Sbjct: 275 WGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGEQPLY 334

Query: 241 ARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELLM 284
           ARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELLM
Sbjct: 335 ARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELLM 377

[Close]

BLAST of CsaV3_2G032020.1 vs. NCBI nr
Match: XP_008445208.1 (PREDICTED: uncharacterized protein LOC103488307 [Cucumis melo])

HSP 1 Score: 547.7 bits (1410), Expect = 2.3e-152
Identity = 273/283 (96.47%), Postives = 275/283 (97.17%), Query Frame = 0


Query: 1   MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS 60
           M SISLEELHLYHSIDREIFSRLLI+LSRDPAQSLLIISLWLWLEEQG TNFIFRIMPLS
Sbjct: 1   MTSISLEELHLYHSIDREIFSRLLIKLSRDPAQSLLIISLWLWLEEQGFTNFIFRIMPLS 60

Query: 61  DPSLNSLANEAVFCLSCLDSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISGV 120
           DPSLNSLANEAVFCLSCLDS N PG PHP TVLPATSKA GR+IPVEMFVQNRFRAISGV
Sbjct: 61  DPSLNSLANEAVFCLSCLDSTNHPGLPHP-TVLPATSKAGGREIPVEMFVQNRFRAISGV 120

Query: 121 KYFLTNVCARIFTDILEIVLGRNNSQPNEALVIHGFPHPIFGSITIIPKSLDQDFPTGGL 180
           KYFLTNVCARIFTDILEIVLGRNNSQ NEALVIHGFPHPIFGSITIIPKSLDQDFPTGGL
Sbjct: 121 KYFLTNVCARIFTDILEIVLGRNNSQSNEALVIHGFPHPIFGSITIIPKSLDQDFPTGGL 180

Query: 181 WGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGEQPLY 240
           WGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGEQPLY
Sbjct: 181 WGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGEQPLY 240

Query: 241 ARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELLM 284
           ARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELLM
Sbjct: 241 ARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELLM 282

[Close]

BLAST of CsaV3_2G032020.1 vs. NCBI nr
Match: XP_023538156.1 (uncharacterized protein LOC111799011 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424.9 bits (1091), Expect = 2.2e-115
Identity = 212/286 (74.13%), Postives = 239/286 (83.57%), Query Frame = 0


Query: 1   MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS 60
           M SISLEELHLYH+IDRE+FSRL+I LSRDPAQSLLIISLWLWLEEQG TNFIF+I+   
Sbjct: 1   MASISLEELHLYHAIDRELFSRLVINLSRDPAQSLLIISLWLWLEEQGFTNFIFKIISFP 60

Query: 61  DPSLNSLANEAVFCLSCLD-SNNQPGCPHPT---TVLPATSKAAGRDIPVEMFVQNRFRA 120
           D  +NSLANEA FCL+ LD  +   G PHPT    V PATS  AG +I V +F++NRFRA
Sbjct: 61  DHFINSLANEAFFCLNSLDFDSRHGGGPHPTLLPPVFPATSLVAGTEISVVLFIRNRFRA 120

Query: 121 ISGVKYFLTNVCARIFTDILEIVLGRNNSQPNEALVIHGFPHPIFGSITIIPKSLDQDFP 180
           ISGVKYFLTNVC+R+FTDILEIVLGR +SQ + ALVI+GFPHP+FGSI I+PK LD  FP
Sbjct: 121 ISGVKYFLTNVCSRVFTDILEIVLGRTDSQSDAALVINGFPHPVFGSIRIVPKCLDHTFP 180

Query: 181 TGGLWGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGE 240
           TG LW W  +D G+ EDDRTLFLTFSRGFPV+AEE+KGLF +AFG+CV  IQME V  GE
Sbjct: 181 TGRLWEWRMSDGGIVEDDRTLFLTFSRGFPVSAEEIKGLFTEAFGECVVGIQMELVPVGE 240

Query: 241 QPLYARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELL 283
           QPLYAR+VMSSVV VD+ILDGKRIAKFR NGKHIWARKYERRSELL
Sbjct: 241 QPLYARVVMSSVVAVDRILDGKRIAKFRTNGKHIWARKYERRSELL 286

[Close]

BLAST of CsaV3_2G032020.1 vs. NCBI nr
Match: XP_022951408.1 (uncharacterized protein LOC111454239 [Cucurbita moschata])

HSP 1 Score: 424.5 bits (1090), Expect = 2.9e-115
Identity = 213/287 (74.22%), Postives = 242/287 (84.32%), Query Frame = 0


Query: 1   MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS 60
           M SISLEELHLYH+IDRE+FSRL+I LSRDPAQSLLIISLWLWLEEQG TNFIF+I+P  
Sbjct: 1   MASISLEELHLYHAIDRELFSRLMINLSRDPAQSLLIISLWLWLEEQGFTNFIFKIIPFP 60

Query: 61  DPSLNSLANEAVFCLSCL--DSNNQPGCPHPT---TVLPATSKAAGRDIPVEMFVQNRFR 120
           D  +NSLANEA+FCL+ L  DS +  G PHPT    V PATS  AG +I V +F++NRFR
Sbjct: 61  DHFINSLANEALFCLNSLVFDSRHGGG-PHPTLLPPVFPATSLVAGTEISVVLFIRNRFR 120

Query: 121 AISGVKYFLTNVCARIFTDILEIVLGRNNSQPNEALVIHGFPHPIFGSITIIPKSLDQDF 180
           AISGVKYFLTNVC+R+FTDILE VLGR +SQ + ALVI+GFPHP+FGSITI+PK L+  F
Sbjct: 121 AISGVKYFLTNVCSRVFTDILETVLGRTDSQSDAALVINGFPHPVFGSITIVPKCLNHTF 180

Query: 181 PTGGLWGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAG 240
           PTG LW W  +D G+ EDDRTLFLTFSRGFPV+AEE+KGLF +AFG+CV  IQME V  G
Sbjct: 181 PTGRLWEWRMSDGGIVEDDRTLFLTFSRGFPVSAEEIKGLFTEAFGECVVGIQMELVPVG 240

Query: 241 EQPLYARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELL 283
           EQPLYAR+VMSSVV VD+ILDGKRIAKFR NGKHIWARKYERRSELL
Sbjct: 241 EQPLYARVVMSSVVAVDRILDGKRIAKFRTNGKHIWARKYERRSELL 286

[Close]

BLAST of CsaV3_2G032020.1 vs. TAIR10
Match: AT3G45200.1 (unknown protein)

HSP 1 Score: 243.8 bits (621), Expect = 1.3e-64
Identity = 133/305 (43.61%), Postives = 191/305 (62.62%), Query Frame = 0


Query: 1   MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS 60
           M  ++ +ELH++H+ DREIFS+L+++ SR PA+SLL+++ WLWLE+ G  N    I+ L+
Sbjct: 1   MSLLNAQELHVFHAQDREIFSKLVLKFSRPPAESLLVMATWLWLEDFGFENIFSIILTLT 60

Query: 61  DPSLNSLANEAVFCLSCLDSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISGV 120
           DP +  LA EAV C  CL  NN      P   +P T+K   ++I ++M  +NR+ AI+G+
Sbjct: 61  DPLIAGLAYEAVSCFQCLSLNNP-----PIGRIPLTTKYLKKNISLQMIYKNRYSAITGI 120

Query: 121 KYFLTNVCARIFTDILEIVLGRNNSQPNEA-----LVIHGFPHPIFGSITIIPKSLDQD- 180
           K FLT VC RIFTDIL  VL  ++    +A     L I GFPHPIFGSI ++P  +D+D 
Sbjct: 121 KNFLTTVCTRIFTDILLRVLPPSSMSSFDARLRQPLQIPGFPHPIFGSINVMPNEVDRDN 180

Query: 181 ---------FPTGGLWGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGD-CV 240
                    F   GLWGW +A+   +E+DRTLFLTFSRG+PVT  E+  LF + +G+ CV
Sbjct: 181 FSNKNNNLFFIPNGLWGW-NANCIATENDRTLFLTFSRGYPVTHAEIIELFTKEYGENCV 240

Query: 241 ESIQME-----------EVEAGEQPLYARMVMSSVVPVDQILDGKRIAKFRINGKHIWAR 279
           E + M+                +Q L+AR+V+ SV  VD++LD ++  +  I GK+IWAR
Sbjct: 241 EGVYMQHDNKRSFNANANRSCEQQSLFARLVLDSVTTVDRVLDDEQKKELMIYGKNIWAR 299

[Close]

BLAST of CsaV3_2G032020.1 vs. TAIR10
Match: AT1G64870.1 (unknown protein)

HSP 1 Score: 238.0 bits (606), Expect = 6.9e-63
Identity = 132/305 (43.28%), Postives = 193/305 (63.28%), Query Frame = 0


Query: 5   SLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLSDPSL 64
           ++E+LH +H+ +REIFS+L+ +L R PA+SLL+++ WLW E+ G  N    I   SD  +
Sbjct: 5   TVEQLHAFHAQEREIFSKLVQKLRRPPAESLLVMATWLWFEDFGFGNIFSIITVFSDLLI 64

Query: 65  NSLANEAVFCLSCLDSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISGVKYFL 124
             LANEAV C  CL+S +QP  P+  + +P T +    DI +++   +R+ AI+G+K FL
Sbjct: 65  VDLANEAVLCFRCLES-DQP--PNDVSQIPLTERFMKNDISLQIIHNHRYTAITGIKNFL 124

Query: 125 TNVCARIFTDILEIVLGRNNS----QPNEALVIHGFPHPIFGSITIIPKSLDQD------ 184
           T +C+RIF+DIL+ VL  ++S         L+I GFPHP FGSI ++P  + +D      
Sbjct: 125 TTICSRIFSDILQRVLPSSSSSFITNLRHPLIIPGFPHPTFGSINVLPNIVARDNLPNAN 184

Query: 185 ---FPTGGLWGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFG-DCVESIQME 244
              FP  GLWGW +A+   ++ +RT+FLTFSRGFPV+  EV  LF + +G DCVES+ M 
Sbjct: 185 SFLFP-HGLWGW-NANHVATDKERTVFLTFSRGFPVSHAEVIHLFTEIYGEDCVESVYMP 244

Query: 245 EVEAG------------EQPLYARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERR 284
           E                +QPL+A+MV+ SVV VD+IL G+   K++INGKHIWARK++  
Sbjct: 245 EDGGNSSNDNTNCNGHQQQPLFAKMVLDSVVTVDRILSGQEKQKYKINGKHIWARKFKNN 304

[Close]

BLAST of CsaV3_2G032020.1 vs. TAIR10
Match: AT5G11220.1 (unknown protein)

HSP 1 Score: 208.0 bits (528), Expect = 7.7e-54
Identity = 111/263 (42.21%), Postives = 166/263 (63.12%), Query Frame = 0


Query: 38  ISLWLWLEEQGVTNFIFRIMPLSDPSLNSLANEAVFCLSCLDSNNQPGCPHPTTVLPATS 97
           ++ W WLE+    N +  I+ LSDP + +LANEAV C  CLDS  Q   P+    +P T+
Sbjct: 1   MATWFWLEDFFSQNILSTILALSDPVIMALANEAVLCFQCLDSAEQ---PNDFNQIPLTA 60

Query: 98  KAAGRDIPVEMFVQNRFRAISGVKYFLTNVCARIFTDILEIVLGRNNSQP-----NEALV 157
           +   +DI +++F ++R+ AI+G++ FLT VC+RIF+DIL+  L  ++S P        L+
Sbjct: 61  ELLAKDISLQIFHKHRYSAIAGIRNFLTTVCSRIFSDILQRALPPSSSYPFVTRLRHPLI 120

Query: 158 IHGFPHPIFGSITIIPKSLDQD-------FP-TGGLWGWPSADAGMSEDDRTLFLTFSRG 217
           I GFPHP FGSI ++   +  D       FP + GLWGW +A    ++++RT+F+TFSRG
Sbjct: 121 IPGFPHPTFGSINVMHDVVVGDNLYNNNLFPCSHGLWGW-NASCIATDNERTMFITFSRG 180

Query: 218 FPVTAEEVKGLFVQAFGD-CVESIQMEEVEAG-----------EQPLYARMVMSSVVPVD 276
           FPV+  EVK  F + +G+ CVE + M+E               +Q L+A++V++SV  VD
Sbjct: 181 FPVSQAEVKRFFTKNYGENCVEGVYMKEDNKNFLNANGNDNGQQQSLFAKLVLNSVATVD 240

[Close]

BLAST of CsaV3_2G032020.1 vs. TAIR10
Match: AT5G13620.1 (unknown protein)

HSP 1 Score: 153.7 bits (387), Expect = 1.7e-37
Identity = 98/283 (34.63%), Postives = 147/283 (51.94%), Query Frame = 0


Query: 3   SISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQG-VTNFIFRIMPLSD 62
           +++ +E + +H  DR +F R +++L RD  QSL ++S  L+LE+ G V+N I     L D
Sbjct: 9   AVTRDEFNAFHKCDRALFRRFVVRLRRDINQSLQVMSFLLYLEKSGLVSNLIVNFNSLPD 68

Query: 63  PSLNSLANEAVFCLSCLDSNN--QPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISG 122
             +N++A+E V CLSCL   N           ++P  ++  G  + + +  QNR   +  
Sbjct: 69  FFINTVADEVVMCLSCLSYENFSMFVANFGKKIIPLITRMTGEYLTLAVIHQNRESILLD 128

Query: 123 VKYFLTNVCARIFTDILEIVLGRNNSQPNEALVIHGFPHPIFGSITIIPKSLDQDFPTGG 182
           +K  LT++C   F DI          +  + L      H    S   +  S  Q      
Sbjct: 129 MKKHLTSICYPAFEDICVQAEKEKVIEDMKHLGFSKAVHKAGSSSQFL--SEQQATTRTS 188

Query: 183 LWGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGEQPL 242
             G  S D    EDDRT+FLTFSRG+P++  EV   F + FG+ +E+I M   E  EQ L
Sbjct: 189 KVGVFSEDEQAREDDRTVFLTFSRGYPLSEAEVHAYFTRRFGEIIEAIIMPGGEGNEQAL 248

Query: 243 YARMVMSSVVPVDQIL-DGKRIAKFRINGKHIWARKYERRSEL 282
           YA+MV+ S   + +I+ DG    K+ INGKH+WARKY  RS +
Sbjct: 249 YAKMVLHSAAMIPEIVSDGIERNKYTINGKHVWARKYIPRSSI 289

[Close]

BLAST of CsaV3_2G032020.1 vs. TAIR10
Match: AT1G49290.1 (unknown protein)

HSP 1 Score: 134.0 bits (336), Expect = 1.4e-31
Identity = 89/311 (28.62%), Postives = 151/311 (48.55%), Query Frame = 0


Query: 4   ISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQG-VTNFIFRIMPLSDP 63
           ++ +E + +H+IDR +FSRL+  L+RD  QS L +   L+LE+     + I  ++ L + 
Sbjct: 19  VTRDEFNAFHTIDRTLFSRLVFNLNRDVDQSFLAMCFLLFLEQSSYARDIIAYLVSLPNA 78

Query: 64  SLNSLANEAVFCLSCL-----DSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAI 123
            ++++ANE   C++ L      S          +++P   +  G    + +  Q R    
Sbjct: 79  FVDAVANEIGVCINLLYNVEFASTFFAADNDDNSMIPLLLRITGGKFTLRLINQQRKNFC 138

Query: 124 SGVKYFLTNVCARIFTDILEIVLGRNNSQPNEALVIHGF--------------------- 183
           +GV    T+VC R F+D+ E    R N +   AL    F                     
Sbjct: 139 AGVTKSWTDVCTRAFSDLCE-TAHRINREKQLALEREKFIEDMKKLRLSLQQEKSNRLSV 198

Query: 184 ------PHPIFGSITIIPKSLDQDFPTGGLWGWPSADAGMSEDDRTLFLTFSRGFPVTAE 243
                   P       +    ++             +  ++ DDRT+FLTFS+G+P++  
Sbjct: 199 QQVKIASPPXXXXXXXVEDETEKALREKETMEVKEKEGVLAADDRTVFLTFSKGYPISEA 258

Query: 244 EVKGLFVQAFGDCVESIQMEEVEAGEQPLYARMVM--SSVVPVDQILDGKRIAKFRINGK 280
           EV+  F + FG+ +E+++M+EVEA EQPL+A+MVM       +D+I+  +   KF I+GK
Sbjct: 259 EVRVYFTRRFGEVIEAVEMQEVEANEQPLFAKMVMKLQCASMMDEIVSARFRNKFTIDGK 318

[Close]

BLAST of CsaV3_2G032020.1 vs. TrEMBL
Match: tr|A0A0A0LLY9|A0A0A0LLY9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381710 PE=4 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 8.7e-161
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 1   MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS 60
           MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS
Sbjct: 1   MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS 60

Query: 61  DPSLNSLANEAVFCLSCLDSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISGV 120
           DPSLNSLANEAVFCLSCLDSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISGV
Sbjct: 61  DPSLNSLANEAVFCLSCLDSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISGV 120

Query: 121 KYFLTNVCARIFTDILEIVLGRNNSQPNEALVIHGFPHPIFGSITIIPKSLDQDFPTGGL 180
           KYFLTNVCARIFTDILEIVLGRNNSQPNEALVIHGFPHPIFGSITIIPKSLDQDFPTGGL
Sbjct: 121 KYFLTNVCARIFTDILEIVLGRNNSQPNEALVIHGFPHPIFGSITIIPKSLDQDFPTGGL 180

Query: 181 WGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGEQPLY 240
           WGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGEQPLY
Sbjct: 181 WGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGEQPLY 240

Query: 241 ARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELLM 284
           ARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELLM
Sbjct: 241 ARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELLM 283

[Close]

BLAST of CsaV3_2G032020.1 vs. TrEMBL
Match: tr|A0A1S3BCV6|A0A1S3BCV6_CUCME (uncharacterized protein LOC103488307 OS=Cucumis melo OX=3656 GN=LOC103488307 PE=4 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 1.5e-152
Identity = 273/283 (96.47%), Postives = 275/283 (97.17%), Query Frame = 0


Query: 1   MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS 60
           M SISLEELHLYHSIDREIFSRLLI+LSRDPAQSLLIISLWLWLEEQG TNFIFRIMPLS
Sbjct: 1   MTSISLEELHLYHSIDREIFSRLLIKLSRDPAQSLLIISLWLWLEEQGFTNFIFRIMPLS 60

Query: 61  DPSLNSLANEAVFCLSCLDSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISGV 120
           DPSLNSLANEAVFCLSCLDS N PG PHP TVLPATSKA GR+IPVEMFVQNRFRAISGV
Sbjct: 61  DPSLNSLANEAVFCLSCLDSTNHPGLPHP-TVLPATSKAGGREIPVEMFVQNRFRAISGV 120

Query: 121 KYFLTNVCARIFTDILEIVLGRNNSQPNEALVIHGFPHPIFGSITIIPKSLDQDFPTGGL 180
           KYFLTNVCARIFTDILEIVLGRNNSQ NEALVIHGFPHPIFGSITIIPKSLDQDFPTGGL
Sbjct: 121 KYFLTNVCARIFTDILEIVLGRNNSQSNEALVIHGFPHPIFGSITIIPKSLDQDFPTGGL 180

Query: 181 WGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGEQPLY 240
           WGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGEQPLY
Sbjct: 181 WGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGEQPLY 240

Query: 241 ARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELLM 284
           ARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELLM
Sbjct: 241 ARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELLM 282

[Close]

BLAST of CsaV3_2G032020.1 vs. TrEMBL
Match: tr|A0A067E050|A0A067E050_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g038800mg PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 5.6e-91
Identity = 171/284 (60.21%), Postives = 218/284 (76.76%), Query Frame = 0


Query: 1   MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS 60
           M SISLEELH YH+IDR+ FSRL+I L RDP  SLL+++ WLWLEE G  N I ++M L+
Sbjct: 1   MTSISLEELHAYHTIDRDAFSRLVITLRRDPGDSLLVMATWLWLEEMGFPNIITKLMNLT 60

Query: 61  DPSLNSLANEAVFCLSCLDSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISGV 120
           DP +N LA+E   CL+   +NN     +    LP TS+   R+I +++F+QNRF+AISG+
Sbjct: 61  DPMVNILADEVASCLNSFQTNNTQTVAN--VALPFTSRIMEREISLQIFLQNRFQAISGI 120

Query: 121 KYFLTNVCARIFTDILEIVLGRNNS--QPNEALVIHGFPHPIFGSITIIPKSLDQDFPTG 180
           K FL  VCARIFTDIL+ VLG ++     N +L+I GFPHPIFG++TI+P+++D DFP+G
Sbjct: 121 KNFLNTVCARIFTDILQRVLGMSSQVILNNHSLIIPGFPHPIFGTLTIVPRAMDYDFPSG 180

Query: 181 GLWGW-PSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEE-VEAGE 240
           GLWGW P+ +A  SEDDRT+FLTFSRGFPVT +EVK LF + +GDCVESI M+E V + E
Sbjct: 181 GLWGWNPTNNA--SEDDRTMFLTFSRGFPVTRDEVKELFTRMYGDCVESIHMQENVPSNE 240

Query: 241 QPLYARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSE 281
           QPL+AR+V+ SV  VDQIL G+RIAKFRINGKHIWARKYERR +
Sbjct: 241 QPLFARLVLQSVANVDQILSGRRIAKFRINGKHIWARKYERRDQ 280

[Close]

BLAST of CsaV3_2G032020.1 vs. TrEMBL
Match: tr|A0A2H5QDZ5|A0A2H5QDZ5_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_220700 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.2e-90
Identity = 171/284 (60.21%), Postives = 217/284 (76.41%), Query Frame = 0


Query: 1   MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS 60
           M SISLEELH YH+IDR+ FSRL+I L RDP  SLL+++ WLWLEE G  N I ++M L+
Sbjct: 1   MTSISLEELHAYHTIDRDAFSRLVITLRRDPGDSLLVMATWLWLEEMGFPNIITKLMNLT 60

Query: 61  DPSLNSLANEAVFCLSCLDSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISGV 120
           DP +N LA+E   CL+   +NN          LP TS+   R+I +++F+QNRF+AISG+
Sbjct: 61  DPMVNILADEVASCLNSFQTNNTQTV--ADVALPFTSRIMEREISLQIFLQNRFQAISGI 120

Query: 121 KYFLTNVCARIFTDILEIVLGRNNS--QPNEALVIHGFPHPIFGSITIIPKSLDQDFPTG 180
           K FL  VCARIFTDIL+ VLG ++     N +L+I GFPHPIFG++TI+P+++D DFP+G
Sbjct: 121 KNFLNTVCARIFTDILQRVLGMSSQVILNNHSLIIPGFPHPIFGTLTIVPRAMDYDFPSG 180

Query: 181 GLWGW-PSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEE-VEAGE 240
           GLWGW P+ +A  SEDDRT+FLTFSRGFPVT +EVK LF + +GDCVESI M+E V + E
Sbjct: 181 GLWGWNPTNNA--SEDDRTMFLTFSRGFPVTRDEVKELFTRMYGDCVESIHMQENVPSNE 240

Query: 241 QPLYARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSE 281
           QPL+AR+V+ SV  VDQIL G+RIAKFRINGKHIWARKYERR +
Sbjct: 241 QPLFARLVLQSVANVDQILSGRRIAKFRINGKHIWARKYERRDQ 280

[Close]

BLAST of CsaV3_2G032020.1 vs. TrEMBL
Match: tr|A0A061GIY5|A0A061GIY5_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_037015 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.1e-89
Identity = 170/280 (60.71%), Postives = 213/280 (76.07%), Query Frame = 0


Query: 1   MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS 60
           M SI+LEELH YH+IDREIFSRL+I L RDPA+SLL+++LWLWLEE+G  N I +++ LS
Sbjct: 1   MASITLEELHTYHAIDREIFSRLVITLMRDPAESLLVMALWLWLEEKGYPNIIAKMVKLS 60

Query: 61  DPSLNSLANEAVFCLSCLDSNNQPGCPHPTTVLPATSKAAGRDIPVEMFVQNRFRAISGV 120
           DP L +LA EAV CL+CL S N P  P P  V P T++   +DI  +MF QN+F  ISG+
Sbjct: 61  DPLLEALAGEAVSCLNCLGSGN-PTIP-PNGVFPLTARIMEKDISFQMFHQNKFSTISGI 120

Query: 121 KYFLTNVCARIFTDILEIVLGRNNSQ-PNEALVIHGFPHPIFGSITIIPKSLDQDFPTGG 180
           K FL  VC+RIFTDIL+ V+G  +    N+ LVI GFPH +FG +TI+P+++D  FP GG
Sbjct: 121 KNFLNTVCSRIFTDILQRVMGSTSQVISNQPLVIPGFPHSLFGRVTIVPRAMDHGFPVGG 180

Query: 181 LWGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEE-VEAGEQP 240
           LWGW   +  +SEDDRTLFLTFSRGFPV+ +EV+ LF +  GDCV+S+ M+E V   EQP
Sbjct: 181 LWGWHPCN-NVSEDDRTLFLTFSRGFPVSEDEVRELFTKICGDCVDSVHMQENVPCNEQP 240

Query: 241 LYARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERR 279
           L+ARMV+ SV  VDQIL+ +RIAKFRINGKHIWARKYERR
Sbjct: 241 LFARMVLHSVTNVDQILNRRRIAKFRINGKHIWARKYERR 277

The following BLAST results are available for this feature:

BLAST of CsaV3_2G032020.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN62945.1	1.3e-160	100.00	hypothetical protein Csa_2G381710 [Cucumis sativus]	[more]
XP_004138857.2	1.3e-160	100.00	PREDICTED: uncharacterized protein LOC101208140 [Cucumis sativus]	[more]
XP_008445208.1	2.3e-152	96.47	PREDICTED: uncharacterized protein LOC103488307 [Cucumis melo]	[more]
XP_023538156.1	2.2e-115	74.13	uncharacterized protein LOC111799011 [Cucurbita pepo subsp. pepo]	[more]
XP_022951408.1	2.9e-115	74.22	uncharacterized protein LOC111454239 [Cucurbita moschata]	[more]

BLAST of CsaV3_2G032020.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G45200.1	1.3e-64	43.61	unknown protein	[more]
AT1G64870.1	6.9e-63	43.28	unknown protein	[more]
AT5G11220.1	7.7e-54	42.21	unknown protein	[more]
AT5G13620.1	1.7e-37	34.63	unknown protein	[more]
AT1G49290.1	1.4e-31	28.62	unknown protein	[more]

BLAST of CsaV3_2G032020.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G032020.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LLY9\|A0A0A0LLY9_CUCSA	8.7e-161	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381710 PE=4 SV=1	[more]
tr\|A0A1S3BCV6\|A0A1S3BCV6_CUCME	1.5e-152	96.47	uncharacterized protein LOC103488307 OS=Cucumis melo OX=3656 GN=LOC103488307 PE=...	[more]
tr\|A0A067E050\|A0A067E050_CITSI	5.6e-91	60.21	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g038800mg PE=4 SV=1	[more]
tr\|A0A2H5QDZ5\|A0A2H5QDZ5_CITUN	1.2e-90	60.21	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_220700 PE=4 SV=1	[more]
tr\|A0A061GIY5\|A0A061GIY5_THECC	3.1e-89	60.71	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_037015 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_2G032020	CsaV3_2G032020	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G032020.1.cds1	CsaV3_2G032020.1.cds1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G032020.1.exon1	CsaV3_2G032020.1.exon1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G032020.1	CsaV3_2G032020.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33527:SF1	F13O11.17 PROTEIN	coord: 1..278
None	No IPR available	PANTHER	PTHR33527	FAMILY NOT NAMED	coord: 1..278