CsaV3_2G030790.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGGAAGGATATATCTTCACACCGGACTCCACGATCCTTCTCCAATGGCAGCAAAATGGGAAGGCCGGGTTACAGAAACCTTAACCGTGGCGACGCCGGACCAGATATGGCCCATGATAAAGGATTTCTTCAACTTCCACAAATGGTTTCCAACTCTAGCTAATTGCTACGGACTTTCAGGCACCAACGCCGAGGTGGGCTCCGTCCGGTTCTGCTCCGGGTTCTCGATTCCCTCCTCCGACGGCTCAGATGGCGTTGTTAGCTGGTCCAAAGAACGCCTGGTGGGAGTGGACGAGGAGCACCGCCGCATATGCTACGAGATAGTGGATAGCAACATAGGATTCAAGTCGTACGTGGCGACGATGGAGGTGGGCAGTGTGAGCGGGGGTGGGTGCATGATTGAGTGGAGGTTTGAGGTTGAGGCAGTGGAAGGCTTGAAGCTGGAGGATTTGGTGAAGAAGTATGAAGTGGGATTGAGGTCGATGGCCAACCGAATGGAGGCTGCTGTAGTAGAAAATGAAATCACAAAGTAACCATTCGTTGAGGTTCTTATTGTAATAATTATGCCTTTTTGGCTTCTCCTCAATGCTAATTTCAATTTCTGTCTTTTATATTATATAGTTACTATCGTTCTTGAAAAAACCATGCTAATGTCAGCCATGCATGTGGTAGCGATTCCTTTGTCCTTTCTCCACTTCAAAGAAAAGTTCAAACATCAATGCCCAACATTTCTATCCATTTTTTTTTCTTTTTTAAAACAACAATATATTCTGTTGCAAAAAAAAAAAGGAGAGAAAAATAAGAAATATTACATTTATGACTTTTAAGGGAATTTCTAATTCAATATAAAAAGTATAAATTAACTAAAATGATTTTACAGTTGATACTCACATAAGACAGTGTGATTACAAAGCCATCTTGAAAAAAACAAGCTTGTACATTTAAGCCATATTTAAATAGTTTCTATTTTTATATCGGAATCAAAGGTAGTGAGACTTTTCAAATTCCAATCAATCTAAACTCAACCCAAACAACGTATTAGACAAGCTACTTTTTAACTAGACGGAACACGAGAGTAGCCTTTATAGTACCATAATCATTAGAACTTATGTATGACTTTATATGACATACAATATAATTACTATAAGAAAATGTCAATATTTCTAAACTTATCATTTAATTAACTTAATAATATTTTTTTATGCTTCACCCAAATGAAAGTTAAAATAATAATAATAATAACGATTAAATAAAGAATCCCATCTGATTCCCATTTTTCTAAAGTTGAGAAGAAAACAGAATAAAGAAATCGTTTAGTGGCATAGGAATGTCTATTTAATCTAAATTAAAATCCATCATAAAGGAACAACAAACACTAAACCTTCTCTATCTCTCCATGGAACAACAATCGCCACCGCCGCCTCCGTCGAAGTGGGAAGGAGAAGTCTTCGCCGAGACAACCGCCGCAGATCCCCATCAAATCTGGCCGCTACTGACCGACGACTTCTGCAGCCTCCACAAATGGCTCCCCTTTGTCGACACCTGTCACTACGTCGAAGGCGTACCTGGGCAGCCAGGCTTGGTCCGCCACTGCGCCGTCACCGTCACCCCGTCGTCGATCAAGTGGGCCAAAGAGAGGCTGAATCTGATTGATCCCATCGCACACACTCTCACCTACGAGATCCTCGATAACAACATGGGATTCAAATCCTACGTGGCCACCATGAAGCTACTCCAGGGAAGCGGCGGGGGATGCAAGTTCGTCTGGTCGTTCGTGGCGGATCCGATCGAAGGGTGGCCGCTGGAGGAGTTTGTGAAGTATCTTGACTCTGGTCTCCACCAAATGGTGAATAAAATGGCTGACTTTTTGAAGAAGAGTCCCCTATAAACATTATCATTTTTCAAATCTTTATATTGAACTATTTGGAGCTGATAATAAGTTTTAGTTTCATTTTTCCTTTTACTTACAACAAATGTTTGTAGAGAAAGGGAAATTTGAATTCTCTATGTTATTTAAGTTGCGTTGACTATGAGTTTATCTTAGAAATTCTCATGTGTGTTTAATTTGTTTGATTTTATGATTGTGTATCTCATTTGAGATTTTGTTCTTACGTCTTCTTGTGTATATGAACTGTATTTTAATAGTTAAGATGCATTCAAGTTTTTTCTATTTGTTATTTAATATCTTTGTTTGTATTTTTTTATTTCACGAAAGAAAAAGAAAACAAATCAAAATTAGAATAGTCAAGTTTCAAATGATATATAGTGACATTTGAACAAATTGCTTTTCAAGACAAAGGTACCTGGAAAGAGGGAGGATTGACAACATAGAATAGATGAATTGATTTGATCTGTCTATATAGGTTTTCTTTTCACTGATAAATAAAAAATCATGATTAAAAACCGTATAAACAGAATAAAATAAAATAATTACTATCGTTCTTTTAAAAAAATATATGCTAAGCTAAATTATGAATTAAGTAGATATGGAAAAAACTACACTCTAAATTAACGAAGGTTTGAAGATTGTGACAATCAAATGCAAGCTTTTGTCCTTAGCATTACACTTGACGGTTGTTAGTTAGATTTGGATGCTTCAAATTTCAAAAAGAGTATGTTTCGATCATCATAACAAATATTTATTTATAGGTCGTAGTTTCAACTTGCTCACGAGTGATTTTTCCGTTAGAAAAACCAAACGTTTAAAAGGCTTGAAATGGATCAAAAATGTCATCTAAAGTGACTGTTTTTGTTTCTACCAAATTGATTGTCAAGACAAATGTACATGTTTTTAATATACCTTTAGAAAAAGTACATGTTTTCACATAAGCTTTAGTTCTTAAAGATATCATAGCAGAACATTATTGATCTTGTGAAAACATAAAGCAATTGTATCATAATTTTAAATTTGCTTAACTGAAATTGAATGATAATTGTCTTAAGTTATAAATATTAAATAAAATAACATACCCAAAAACAGTCTAAAAAGAGTCTGTATATTGGTTTTAAATTTCTTACTAATTATAGTTAATAATTTTGTTTCTTATTATGTAATTAATCGAGAGTAAAGAAAATAGTTTAATTAAATGATCAAAAGAAGTGAGGGTTCTTTTTTTTTTTTTTCTTTCTAGAATTTGGGAAAAATACTACTATTGATTTCTACTTAAATTAGTTTTTAAATTTAAATTTAAGTTTTAAATGTTACCATTTAACACAATCTTCATCCTGAGAAGTACAAAAAAGATGAAAAAAATATTACATTAAAACTCAAAACAAAAGAATCTGAGTCTCTAACTTTAAATTTAAATTTGGCAATACAAACATTAAGATTGAGAGAGAAATTAATGTTTATATCATAAATGTAGTTTAATGTCAACCATGCATGTGATAGCAATTCCTTTGTCCTTTCTCCCACTCATCAATGCCCAACATTTCTATCCATTTTTCTAAAAAACAATATATTTTATTGCAAAAAGAAAAAGAGACTAAATTATATTTACTTTTAACATAGTAATGGAAGCCATTAGCACATAACCTAGAGCATATTTCAACAAACATAAAGATATGTGATTTGAGTATTCCATATATTTTTATTATTCTACCATTAATTAGATATATATATATGTATGTATATAATATATTGAATCTTTCAATAATATCCAACATTGTGTTTAGGTAGGCCAAACTTGATGGATGAGAGTGAGCCTTATTAGAAAAAAATGTCAATATTTCTAAACTTATTATTTAACCTAAGAGTATTTTTTGTATGCTTTACCCCAATGAAAGTAATAATTAAATAAATAAATCCAATATATTTCCCATTTTTCTAAAGTGGAGAAGAAAACAAAAAAGAAAGAAACCGTTCTGTGCCACCAATCGGAATGTCGATATATAGGCTAACTTCAAATCCATCATAAAGGAAATAACAAGCCCCAAACCTTCCCTCTCTCTCTCTTTTTCTCTCTATCTCTCCATGGAACAACCATCGCCGCCGCCGCCGCCGTCGAAGTGGGAAGGAGAAGTCTTCGCCGAGACAACCGCCGCAGATCCCCACCAAATCTGGCCGCTACTGGCCGACGGCTTCTGCAGCGTCCACAAATGGCTCCCCTTCGTCGACACCTGTCACTACGTCGAAGGCGTACCTGGGCAGCCGGGCTTGATCCGCCACTGCTCCACCACCGACACCACGTCGTCGATCAAGTGGGCCAAAGAGAGGCTGAATCTGATTGATCCCATCGCACATACTCTCACCTACGAGGTCCTCGATAATAACATGGGATTCAAATCCTACGTGGCCACCATGAAGCTACTCCAGGGAAGCGGCGGGGGGTGCAAGTTCGTCTGGTCGTTCGTGGCGGATCCGATCGAAGGGTGGCCGCTGGAGGAGTTTGTGAAGTATCTTGACTCTGCTCTCCACCAAATGATGAAAAAAATGGCTGACTTTTTGCAGAAAAGTCCCTAAACTTTTTCGATTTCATGTAATTGGAATTGAAATTAAGCCATCTGTGTAATAAATAATTAATTTGGCCCTAAAAAACTTCACCAAATCTTAATATTAAACTATATGGAGCTGATAATAAGTTCTATTTTCATTTTTCCTTTTACTTATAACAAAGGTTTGTAGAGAAAGGGAAATTTGAAGTGTATGGTTAATTTAAGTTGGGTTGACTATGAATTTATCTTAGAAATTCTCATGGGTTTAAATTGTTTGATTTTATGATTGTATATCCAAAACGAATCTTTATCTAATATAAAAAAGAGCTCAATTATTTGGGACGAATATTCAGAGAAGTTGACGCGATGTTCAAAAGATAAAGAGGACAAAATTGGTGTGAGATTTTGAGAGATTGCCTTGAAGAAGACCACTAATTTCAGATTTTGTTCTTTCGTTTTCTTCACAATGAACTGTATTTTATATAATTTATATATATCTTAAGACTAAACATGGAAAATGATTATTTTTAGTGACATTTGAACAGAG ATGGGGGGAAGGATATATCTTCACACCGGACTCCACGATCCTTCTCCAATGGCAGCAAAATGGGAAGGCCGGGTTACAGAAACCTTAACCGTGGCGACGCCGGACCAGATATGGCCCATGATAAAGGATTTCTTCAACTTCCACAAATGGTTTCCAACTCTAGCTAATTGCTACGGACTTTCAGGCACCAACGCCGAGGTGGGCTCCGTCCGGTTCTGCTCCGGGTTCTCGATTCCCTCCTCCGACGGCTCAGATGGCGTTGTTAGCTGGTCCAAAGAACGCCTGGTGGGAGTGGACGAGGAGCACCGCCGCATATGCTACGAGATAGTGGATAGCAACATAGGATTCAAGTCGTACGTGGCGACGATGGAGGTGGGCAGTGTGAGCGGGGGTGGGTGCATGATTGAGTGGAGGTTTGAGGTTGAGGCAGTGGAAGGCTTGAAGCTGGAGGATTTGGTGAAGAAGTATGAAGTGGGATTGAGGTCGATGGCCAACCGAATGGAGGCTGCTGAACAACAAACACTAAACCTTCTCTATCTCTCCATGGAACAACAATCGCCACCGCCGCCTCCGTCGAAGTGGGAAGGAGAAGTCTTCGCCGAGACAACCGCCGCAGATCCCCATCAAATCTGGCCGCTACTGACCGACGACTTCTGCAGCCTCCACAAATGGCTCCCCTTTGTCGACACCTGTCACTACGTCGAAGGCGTACCTGGGCAGCCAGGCTTGGTCCGCCACTGCGCCGTCACCGTCACCCCGTCGTCGATCAAGTGGGCCAAAGAGAGGCTGAATCTGATTGATCCCATCGCACACACTCTCACCTACGAGATCCTCGATAACAACATGGGATTCAAATCCTACGTGGCCACCATGAAGCTACTCCAGGGAAGCGGCGGGGGATGCAAGTTCGTCTGGTCGTTCGTGGCGGATCCGATCGAAGGGTGGCCGCTGGAGGAGTTTGTGAAGTATCTTGACTCTGGTCTCCACCAAATGGTGAATAAAATGGCTGACTTTTTGAAGAAGAGTCCCCTATAA ATGGGGGGAAGGATATATCTTCACACCGGACTCCACGATCCTTCTCCAATGGCAGCAAAATGGGAAGGCCGGGTTACAGAAACCTTAACCGTGGCGACGCCGGACCAGATATGGCCCATGATAAAGGATTTCTTCAACTTCCACAAATGGTTTCCAACTCTAGCTAATTGCTACGGACTTTCAGGCACCAACGCCGAGGTGGGCTCCGTCCGGTTCTGCTCCGGGTTCTCGATTCCCTCCTCCGACGGCTCAGATGGCGTTGTTAGCTGGTCCAAAGAACGCCTGGTGGGAGTGGACGAGGAGCACCGCCGCATATGCTACGAGATAGTGGATAGCAACATAGGATTCAAGTCGTACGTGGCGACGATGGAGGTGGGCAGTGTGAGCGGGGGTGGGTGCATGATTGAGTGGAGGTTTGAGGTTGAGGCAGTGGAAGGCTTGAAGCTGGAGGATTTGGTGAAGAAGTATGAAGTGGGATTGAGGTCGATGGCCAACCGAATGGAGGCTGCTGAACAACAAACACTAAACCTTCTCTATCTCTCCATGGAACAACAATCGCCACCGCCGCCTCCGTCGAAGTGGGAAGGAGAAGTCTTCGCCGAGACAACCGCCGCAGATCCCCATCAAATCTGGCCGCTACTGACCGACGACTTCTGCAGCCTCCACAAATGGCTCCCCTTTGTCGACACCTGTCACTACGTCGAAGGCGTACCTGGGCAGCCAGGCTTGGTCCGCCACTGCGCCGTCACCGTCACCCCGTCGTCGATCAAGTGGGCCAAAGAGAGGCTGAATCTGATTGATCCCATCGCACACACTCTCACCTACGAGATCCTCGATAACAACATGGGATTCAAATCCTACGTGGCCACCATGAAGCTACTCCAGGGAAGCGGCGGGGGATGCAAGTTCGTCTGGTCGTTCGTGGCGGATCCGATCGAAGGGTGGCCGCTGGAGGAGTTTGTGAAGTATCTTGACTCTGGTCTCCACCAAATGGTGAATAAAATGGCTGACTTTTTGAAGAAGAGTCCCCTATAA MGGRIYLHTGLHDPSPMAAKWEGRVTETLTVATPDQIWPMIKDFFNFHKWFPTLANCYGLSGTNAEVGSVRFCSGFSIPSSDGSDGVVSWSKERLVGVDEEHRRICYEIVDSNIGFKSYVATMEVGSVSGGGCMIEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAEQQTLNLLYLSMEQQSPPPPPSKWEGEVFAETTAADPHQIWPLLTDDFCSLHKWLPFVDTCHYVEGVPGQPGLVRHCAVTVTPSSIKWAKERLNLIDPIAHTLTYEILDNNMGFKSYVATMKLLQGSGGGCKFVWSFVADPIEGWPLEEFVKYLDSGLHQMVNKMADFLKKSPL
BLAST of CsaV3_2G030790.1 vs. NCBI nr
Match: XP_004148422.1 (PREDICTED: lachrymatory-factor synthase [Cucumis sativus] >KGN62807.1 hypothetical protein Csa_2G373500 [Cucumis sativus]) HSP 1 Score: 357.8 bits (917), Expect = 4.0e-95 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
BLAST of CsaV3_2G030790.1 vs. NCBI nr
Match: XP_012077383.1 (uncharacterized protein LOC105638217 isoform X1 [Jatropha curcas] >KDP34166.1 hypothetical protein JCGZ_07737 [Jatropha curcas]) HSP 1 Score: 334.0 bits (855), Expect = 6.2e-88 Identity = 165/331 (49.85%), Postives = 209/331 (63.14%), Query Frame = 0
BLAST of CsaV3_2G030790.1 vs. NCBI nr
Match: XP_017617653.1 (PREDICTED: uncharacterized protein LOC108462185 [Gossypium arboreum]) HSP 1 Score: 332.4 bits (851), Expect = 1.8e-87 Identity = 164/332 (49.40%), Postives = 215/332 (64.76%), Query Frame = 0
BLAST of CsaV3_2G030790.1 vs. NCBI nr
Match: XP_004148423.2 (PREDICTED: lachrymatory-factor synthase-like [Cucumis sativus] >KGN62806.1 hypothetical protein Csa_2G373490 [Cucumis sativus]) HSP 1 Score: 328.9 bits (842), Expect = 2.0e-86 Identity = 150/152 (98.68%), Postives = 150/152 (98.68%), Query Frame = 0
BLAST of CsaV3_2G030790.1 vs. NCBI nr
Match: XP_002516521.1 (uncharacterized protein LOC8275674 [Ricinus communis] >EEF45862.1 hypothetical protein RCOM_0800710 [Ricinus communis]) HSP 1 Score: 322.4 bits (825), Expect = 1.9e-84 Identity = 162/341 (47.51%), Postives = 212/341 (62.17%), Query Frame = 0
BLAST of CsaV3_2G030790.1 vs. TAIR10
Match: AT2G25770.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 172.2 bits (435), Expect = 5.7e-43 Identity = 81/149 (54.36%), Postives = 102/149 (68.46%), Query Frame = 0
BLAST of CsaV3_2G030790.1 vs. TAIR10
Match: AT4G32870.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 148.7 bits (374), Expect = 6.7e-36 Identity = 66/146 (45.21%), Postives = 95/146 (65.07%), Query Frame = 0
BLAST of CsaV3_2G030790.1 vs. Swiss-Prot
Match: sp|P59082|LFS_ALLCE (Lachrymatory-factor synthase OS=Allium cepa OX=4679 GN=LFS PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.3e-15 Identity = 44/136 (32.35%), Postives = 68/136 (50.00%), Query Frame = 0
BLAST of CsaV3_2G030790.1 vs. TrEMBL
Match: tr|A0A0A0LPR8|A0A0A0LPR8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373500 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 2.7e-95 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
BLAST of CsaV3_2G030790.1 vs. TrEMBL
Match: tr|A0A067KD66|A0A067KD66_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_07737 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 4.1e-88 Identity = 165/331 (49.85%), Postives = 209/331 (63.14%), Query Frame = 0
BLAST of CsaV3_2G030790.1 vs. TrEMBL
Match: tr|A0A0A0LS03|A0A0A0LS03_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373490 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 1.3e-86 Identity = 150/152 (98.68%), Postives = 150/152 (98.68%), Query Frame = 0
BLAST of CsaV3_2G030790.1 vs. TrEMBL
Match: tr|B9RS02|B9RS02_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0800710 PE=4 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 1.2e-84 Identity = 162/341 (47.51%), Postives = 212/341 (62.17%), Query Frame = 0
BLAST of CsaV3_2G030790.1 vs. TrEMBL
Match: tr|A0A2C9W4Y6|A0A2C9W4Y6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G059600 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83 Identity = 160/341 (46.92%), Postives = 207/341 (60.70%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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