CsaV3_2G019570.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G019570.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	NAD-dependent protein deacylase
Location	chr2 : 15541927 .. 15546759 (-)
Sequence length	1074

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATTCTCATCCAGTTTCCATCCAACCTACAATTCTTCCATGTATTCCTCCATTTTCAATCTCTCTGCTTCATATTCTTTTCAATTATGTTCTTCTTTCTTCCTCTTTTCAACCCTTTATTAGGTGAATTCTTCTGATGATTTGTGGTTTTCGAGCATGATGTAAACTCTTACGGTTCAGTGGTAGTTGCATTCTGTTGTGGAAACTGAATTTTCGATATTTGGGTGCTTTATTCGTGTGGCATTCCTTTGAATTGTTCTAATTTTGCCCCCTCCCCGCATGGTACTGATGTATTCGGAAATCATGAGCATTGAAATCCCCTGCAATCCGTTAATATATGGACAACCTTCTCTGTTTAGAGATTTTAAGTTCTGTAAATTCAGACTTTTGGATGTGGGAAATGCAAAATCGACTTGATCAAGCATATTATAAATACCTTTACATTAGACTTACTCATTTAAGTTCCTGGCGAGAGGCGGCGTTCCATAATCTACATTGAAGGAAAGAATCCCCCTCTGGCCTCATCATAAGTCATTTGTCTGTTATTCGTTCTTCTTGTTCAAAGATATCTGTGTAATTGAATTATGTGAATTTTCTATGCTTAATTCAAGATGTTTCCACAACAGTAGTTGGGCTCCACTGTTATGAATAGTATCATATTTTCTACTATCGTATCTTCTCAGGTTACCTTTTGCAATGTAGTTCCTGATTTGGGTTTCAATTCTTATGATTTGATGAAACACCGGGAATTGAAGAAAAATGTAGTAGAAATGCTCCGATGCTATCTGAAAAGAAATGAATAACATTCACTAGGAGGTAGGATTAGTTGCTAGCACTTCAGAAATGAGTTCTTAGTGCTGGAAATACATTGGTATTTGACTTGTGTTTAATAAGCATCTTGCTGAGTAAAAATTAATCTGGTTGTATTAATTTTCTTTGGCTTAATTCAAAATCCACAATAGATAGAAAGTTAGAGAACTATAATCAAGTTTTGTTTCTTAGTAAATTCTTTTTAAGCCTTGGATCGTGAGTTGGTGATTCCTTTTCCTTGTTGGCCGTGAGTTTTTCTTTAAAATTCCAGCCAAAATACATAAACAGAGAAGAACTCTTGCAGACGTACAGTACTATGCTTGAAAAAAGTTGGTCATGTTTTTGTTATTATTAATTTTTTGATGTTAGGATGTTATCGCAAGATTGTGCCAGTGAGTTTTTGAGTAAGAACTTATAATATGATGCTTGGAATTGGATGTTATTAGCGTCTACTATTTTTGTAGGCTTCTTTTTCGAATGCTGAATGTATTACTATTATTTTCATTTTTTCTTCTCATGGAAAGTTTGGGTTTTCATACAAAAAGAAAAGAAAACAAAGGAAAGCATATAAAAATACCACTCAAGTATTGCCGGTCTCCCTTCTTTTGTTCATCTTACGTTCTTACATTTTCATTTCCATCTCAACCATCTTCTTCCAAGCTATCAATGAAATTTTCTTATGATTTGGTTTCGTTTTTAACGTTTTTCAAAACAATTTCTGTTATTTATTTCCTTTTCTTTTTGAATTGTAGTCTTCCTCCTTTGCAAGGAAGTTAGATGGAAACATCATGGGAGGCAAGTGAGCTTCTATTCCATTAGAAAATTCTGATGTCTTGGATTCACTATTTAATAGTATCAAATAAATGACTCAATCACTATTTTGTTCAAAACAATAACAGATACTGCTCAACCTATTGGGCAAAGTTGGCGATTGCACAGGAAGGGAAGATGCTTGATATCTCTTTATTGCTCCTCAAGGAATGTTCAAACATCACGTAACATTTCAGTTAGTTTCTCATCAATCAATGGAGAAAAAACTCACCAAAACTTCCTGAGGGATGAGAAGGTCGCACCTGATTCAGAACCCCCTAGCTTGAAGGATGTTGATTTTTTATATAATTTTCTTGATCTAAGGTTTATTGACATACCTTTGTTGGCATCTCAAAATTTTTTAATCAACAAAAATTCTTCGGGGATGATAAATCGTTAACATCACATGTCATTTGTGTTGTGCTATTATGCATTATGCAGATCAAAGCTTGTGATATCGACAGGAGCTGGAATAAGTATGGAATGTGGAATTCCTGATTATAAAAGGTTTAATCTTCCCTTCCTTATTCTAATATTTCACCTTTTTTTGTTCTTATGTGTTTGTTTTAATTGTGAGATGATTAAACAGTAAACCTTTGTGTTGAGACTTAGATTTGCGTAGAAATGTTGCTAAGTTCAGTTGAAGGCCACCTCTTATGTTTGTTCATACAAAAGCTTTGATACACAGAAGGAAAACTTTCATACATGGCATATTACAGCTCAGGGACTTTGTTAGTGTATGTCGTCTTACTATATATGATTTGTAGTTTGCCAACTGATCCAAGTAAACATTTTCTGTTTTTGTAGCATGTAATGGCTGCTTGATTGACAAGTATAGTTGATCGATACTTATGTTTCGGCTGTAGTTCATTTGTAACTGCAGTGCTGTTCAATGTTCAACATTTCAGGACTTTTACCCTAAAAAAGACCTCACTTGCTCATTTTCCCTTTGCAAACTAAATTTGCTATTGTTTCTCCCTATCCGTTTTCCCCTCCCCATTCAGAACATTAATGGTCTACGTCCTATTAATCCAATGAGAAAAGGCTTCCTAATTTGAACACATTTTATGAATACATATACTGGCAAGTAAATTCTTGTGTACACATGCTTTTGTGTTCTGTTAGCATCTAGTCAAACAAAAATTTTGTATACATAGATTGTCAATTTTCAAGGTCATAATATCTGCTTTCTTCAAGACTTCTGTTAATTTGTTTATGGCTTCTTAAACTGGCATTGCGTTGATTTGAAAATTGTTTTCTGTTTCTCAGTTGATGAACATGTTTTGCACTATTTGGTTAACATCTTTTTGTCATAATGTTATCGTGTAATTTTTCTTTTGTAACACACACATGCCTTTCTTTTCTAATGCAAAAGTTTCTCTATGCTGCAGTCCGAATGGAGCTTATAGTTCTGGTGACAGACCTATTGCACATCAGGTGATCTGAAGGCACGTGTCATACATTCTTTTTGCATTGTATTGATGATTTTTATTACCTAGAGATTTAGAAACAAAATATCGATTATAGTGTAGTATGTACTATTTTTGGTTAATGGTGTCATCAAAAGTTGTCTTTCCATTCGTATTTATTTAATATTGAGTGAATTCTCGTGTATTGAAAATCCTAATTCTAAGGAAATTTCATAACTTAGTAATGTGGATGCTCTCTCTATCTTTTGCTTTTCCACATCCACGTTTCCTTCATCCAAACTATGTTTTCTCATTAAGAAAAAAGGCATATTATCTTCACCCAGGATCTAATTCTCTTTTTTGCAGCACAGTGCTTCTGTGACCCAAGAACACATACTGGGAAGCAGCCACTTGAGCACAAATTCGCTCTTGTTACTAGCAGGAGAGCCATGAACGTTTCTATTCTTTCACTGTTCTTTTATGGATTTTCAACAAGCATTTCTTCGGCAGTTTTTGCTGAAGATTTCGAGCTTGAGAGATACACAGATTCAAAGGAGGGTTTTACTCTTCTTCGACCATCTTCTTGGGTTAAGGTTTTTAGCCCTCTCTCTTTCAACTAGCATCGAAACATTATTTTCTTTTAACTAAACATTTTCTGAAATTGTGTGCTGGAGAAAGGTTGATAAGGCAGGGGCAACAGTTTTGTTTGAAGAGGGGAATAAGGGAAGCAACAATGTTGGTGTTGTAGTGAACCCTGTTCGTCTTACAAGTCTTGGGGAGTTTGGAACTCCTCAATTTGTAGCTGACAAACTTATACAGGCCGAAAAGCGAAAGGTAATGACTAATTGATGCACAGAGTGAGGTTCTCATTTATTCTTGTGAATGTTGCCTGTGAATTACGATGCTTGTTGGTTTCTTTGAAATGCTAGCAAAAATTAATTCTTGAGTTTGTTTGTTTTTTTAAAAAAGAAACAACATATATTATTGAGTTTGAAGCATGAACGCCTTTTTAACTCGTGATCTTTGTTGTGAATTGTGATGATTTGCTCGTCTTTCCTCTTAAAAGGACTGTCTTGCTGAGGTTTCAAACCAAGATTTAAGATGAAGTTTTGAAATTTTTTATCAAAAGCAGATGAAGTTTTAAAAATAGCGAAAAATGTAAATATTGAAACTTGAATTTAGATTATTCAAGGAGCTTAAGAGCACTAATTTATTCCTGGAATTTTCAACAAATTTGTATATTTGGTCTGTAAACTTTCAATATTGGAAGAGATAATTAGCCAGTAATTGAATAGGCAAAAATCTATCCATATTTTTCTTTAGGATTTTAAGTAGTTAACATAGGAAAAGCCATAGTTTTTCTTTCCTTTGTACAAATTGGAAACATCTTTTATATACCTACGGTTGGTCCATTTTATACCATTGGATGTGTTTAGATATTTCATTCAATCAATAAAATTATCTCTTATATATGTAAACATAACCATAATTGTGTTTGGTTCATACACCATCTCTGGGCTGATTTTTGTATGAATATAGGAAAGTACAAAGGATGCTGCAGTGGTTGGTGTTGCAGAGAGATCTGGGGAGGGAGGTTTACAAGTGTATGAGTTTGAGTACACGGTGGATAGCACTAGAGGAGGAATGAAGCGAATTTTTTCCGCTGCTTTTGTGGCTTCTAAGAAGCTTTACATTCTTAACATTTCTCACTCTGACAAACCAGAGAGCCCTCTTGATTCACAAAAAAGAATGATGTTGGAGCAAGTTCTTCATTCCTTCGATGCAGCCCCTTCCTCATAA

mRNA sequence

ATGGCGATTCTCATCCAGTTTCCATCCAACCTACAATTCTTCCATTCTTCCTCCTTTGCAAGGAAGTTAGATGGAAACATCATGGGAGATACTGCTCAACCTATTGGGCAAAGTTGGCGATTGCACAGGAAGGGAAGATGCTTGATATCTCTTTATTGCTCCTCAAGGAATGTTCAAACATCACGTAACATTTCAGTTAGTTTCTCATCAATCAATGGAGAAAAAACTCACCAAAACTTCCTGAGGGATGAGAAGGTCGCACCTGATTCAGAACCCCCTAGCTTGAAGGATGTTGATTTTTTATATAATTTTCTTGATCTAAGATCAAAGCTTGTGATATCGACAGGAGCTGGAATAAGTATGGAATGTGGAATTCCTGATTATAAAAGTCCGAATGGAGCTTATAGTTCTGGTGACAGACCTATTGCACATCAGTGCTTCTGTGACCCAAGAACACATACTGGGAAGCAGCCACTTGAGCACAAATTCGCTCTTGTTACTAGCAGGAGAGCCATGAACGTTTCTATTCTTTCACTGTTCTTTTATGGATTTTCAACAAGCATTTCTTCGGCAGTTTTTGCTGAAGATTTCGAGCTTGAGAGATACACAGATTCAAAGGAGGGTTTTACTCTTCTTCGACCATCTTCTTGGGTTAAGGTTGATAAGGCAGGGGCAACAGTTTTGTTTGAAGAGGGGAATAAGGGAAGCAACAATGTTGGTGTTGTAGTGAACCCTGTTCGTCTTACAAGTCTTGGGGAGTTTGGAACTCCTCAATTTGTAGCTGACAAACTTATACAGGCCGAAAAGCGAAAGGAAAGTACAAAGGATGCTGCAGTGGTTGGTGTTGCAGAGAGATCTGGGGAGGGAGGTTTACAAGTGTATGAGTTTGAGTACACGGTGGATAGCACTAGAGGAGGAATGAAGCGAATTTTTTCCGCTGCTTTTGTGGCTTCTAAGAAGCTTTACATTCTTAACATTTCTCACTCTGACAAACCAGAGAGCCCTCTTGATTCACAAAAAAGAATGATGTTGGAGCAAGTTCTTCATTCCTTCGATGCAGCCCCTTCCTCATAA

Coding sequence (CDS)

ATGGCGATTCTCATCCAGTTTCCATCCAACCTACAATTCTTCCATTCTTCCTCCTTTGCAAGGAAGTTAGATGGAAACATCATGGGAGATACTGCTCAACCTATTGGGCAAAGTTGGCGATTGCACAGGAAGGGAAGATGCTTGATATCTCTTTATTGCTCCTCAAGGAATGTTCAAACATCACGTAACATTTCAGTTAGTTTCTCATCAATCAATGGAGAAAAAACTCACCAAAACTTCCTGAGGGATGAGAAGGTCGCACCTGATTCAGAACCCCCTAGCTTGAAGGATGTTGATTTTTTATATAATTTTCTTGATCTAAGATCAAAGCTTGTGATATCGACAGGAGCTGGAATAAGTATGGAATGTGGAATTCCTGATTATAAAAGTCCGAATGGAGCTTATAGTTCTGGTGACAGACCTATTGCACATCAGTGCTTCTGTGACCCAAGAACACATACTGGGAAGCAGCCACTTGAGCACAAATTCGCTCTTGTTACTAGCAGGAGAGCCATGAACGTTTCTATTCTTTCACTGTTCTTTTATGGATTTTCAACAAGCATTTCTTCGGCAGTTTTTGCTGAAGATTTCGAGCTTGAGAGATACACAGATTCAAAGGAGGGTTTTACTCTTCTTCGACCATCTTCTTGGGTTAAGGTTGATAAGGCAGGGGCAACAGTTTTGTTTGAAGAGGGGAATAAGGGAAGCAACAATGTTGGTGTTGTAGTGAACCCTGTTCGTCTTACAAGTCTTGGGGAGTTTGGAACTCCTCAATTTGTAGCTGACAAACTTATACAGGCCGAAAAGCGAAAGGAAAGTACAAAGGATGCTGCAGTGGTTGGTGTTGCAGAGAGATCTGGGGAGGGAGGTTTACAAGTGTATGAGTTTGAGTACACGGTGGATAGCACTAGAGGAGGAATGAAGCGAATTTTTTCCGCTGCTTTTGTGGCTTCTAAGAAGCTTTACATTCTTAACATTTCTCACTCTGACAAACCAGAGAGCCCTCTTGATTCACAAAAAAGAATGATGTTGGAGCAAGTTCTTCATTCCTTCGATGCAGCCCCTTCCTCATAA

Protein sequence

MAILIQFPSNLQFFHSSSFARKLDGNIMGDTAQPIGQSWRLHRKGRCLISLYCSSRNVQTSRNISVSFSSINGEKTHQNFLRDEKVAPDSEPPSLKDVDFLYNFLDLRSKLVISTGAGISMECGIPDYKSPNGAYSSGDRPIAHQCFCDPRTHTGKQPLEHKFALVTSRRAMNVSILSLFFYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAAPSS

Homology

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BLAST of CsaV3_2G019570.1 vs. NCBI nr
Match: XP_004147342.1 (PREDICTED: psbP domain-containing protein 2, chloroplastic isoform X1 [Cucumis sativus] >KGN62219.1 hypothetical protein Csa_2G336660 [Cucumis sativus])

HSP 1 Score: 710.7 bits (1833), Expect = 2.5e-201
Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0


Query: 1   MAILIQFPSNLQFFHSSSFARKLDGNIMGDTAQPIGQSWRLHRKGRCLISLYCSSRNVQT 60
           MAILIQFPSNLQFFHSSSFARKLDGNIMGDTAQPIGQSWRLHRKGRCLISLYCSSRNVQT
Sbjct: 1   MAILIQFPSNLQFFHSSSFARKLDGNIMGDTAQPIGQSWRLHRKGRCLISLYCSSRNVQT 60

Query: 61  SRNISVSFSSINGEKTHQNFLRDEKVAPDSEPPSLKDVDFLYNFLDLRSKLVISTGAGIS 120
           SRNISVSFSSINGEKTHQNFLRDEKVAPDSEPPSLKDVDFLYNFLDLRSKLVISTGAGIS
Sbjct: 61  SRNISVSFSSINGEKTHQNFLRDEKVAPDSEPPSLKDVDFLYNFLDLRSKLVISTGAGIS 120

Query: 121 MECGIPDYKSPNGAYSSGDRPIAHQCFCDPRTHTGKQPLEHKFALVTSRRAMNVSILSLF 180
           MECGIPDYKSPNGAYSSGDRPIAHQCFCDPRTHTGKQPLEHKFALVTSRRAMNVSILSLF
Sbjct: 121 MECGIPDYKSPNGAYSSGDRPIAHQCFCDPRTHTGKQPLEHKFALVTSRRAMNVSILSLF 180

Query: 181 FYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNKGSNNVG 240
           FYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNKGSNNVG
Sbjct: 181 FYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNKGSNNVG 240

Query: 241 VVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVYEFEYTV 300
           VVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVYEFEYTV
Sbjct: 241 VVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVYEFEYTV 300

Query: 301 DSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAAPSS 358
           DSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAAPSS
Sbjct: 301 DSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAAPSS 357

[Close]

BLAST of CsaV3_2G019570.1 vs. NCBI nr
Match: XP_011649436.1 (PREDICTED: psbP domain-containing protein 2, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 651.7 bits (1680), Expect = 1.4e-183
Identity = 327/328 (99.70%), Postives = 328/328 (100.00%), Query Frame = 0


Query: 30  DTAQPIGQSWRLHRKGRCLISLYCSSRNVQTSRNISVSFSSINGEKTHQNFLRDEKVAPD 89
           +TAQPIGQSWRLHRKGRCLISLYCSSRNVQTSRNISVSFSSINGEKTHQNFLRDEKVAPD
Sbjct: 8   NTAQPIGQSWRLHRKGRCLISLYCSSRNVQTSRNISVSFSSINGEKTHQNFLRDEKVAPD 67

Query: 90  SEPPSLKDVDFLYNFLDLRSKLVISTGAGISMECGIPDYKSPNGAYSSGDRPIAHQCFCD 149
           SEPPSLKDVDFLYNFLDLRSKLVISTGAGISMECGIPDYKSPNGAYSSGDRPIAHQCFCD
Sbjct: 68  SEPPSLKDVDFLYNFLDLRSKLVISTGAGISMECGIPDYKSPNGAYSSGDRPIAHQCFCD 127

Query: 150 PRTHTGKQPLEHKFALVTSRRAMNVSILSLFFYGFSTSISSAVFAEDFELERYTDSKEGF 209
           PRTHTGKQPLEHKFALVTSRRAMNVSILSLFFYGFSTSISSAVFAEDFELERYTDSKEGF
Sbjct: 128 PRTHTGKQPLEHKFALVTSRRAMNVSILSLFFYGFSTSISSAVFAEDFELERYTDSKEGF 187

Query: 210 TLLRPSSWVKVDKAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEK 269
           TLLRPSSWVKVDKAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEK
Sbjct: 188 TLLRPSSWVKVDKAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEK 247

Query: 270 RKESTKDAAVVGVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHS 329
           RKESTKDAAVVGVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHS
Sbjct: 248 RKESTKDAAVVGVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHS 307

Query: 330 DKPESPLDSQKRMMLEQVLHSFDAAPSS 358
           DKPESPLDSQKRMMLEQVLHSFDAAPSS
Sbjct: 308 DKPESPLDSQKRMMLEQVLHSFDAAPSS 335

[Close]

BLAST of CsaV3_2G019570.1 vs. NCBI nr
Match: XP_008460857.1 (PREDICTED: psbP domain-containing protein 2, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 622.9 bits (1605), Expect = 7.0e-175
Identity = 320/359 (89.14%), Postives = 329/359 (91.64%), Query Frame = 0


Query: 1   MAILIQFPSNLQFFHSSSFARKLDGNIMGDTAQPIGQSWRLHRKGRCLISLYCSSRNVQT 60
           MA+LIQFPSNLQFFHSSSFARKLDGNIMGDTAQPIGQSW LHRKGRCLISLYC SRNV+T
Sbjct: 1   MAMLIQFPSNLQFFHSSSFARKLDGNIMGDTAQPIGQSWGLHRKGRCLISLYCFSRNVET 60

Query: 61  SRNISVSFSSINGEKTHQNFLRDEKVAPDSEPPSLKDVDFLYNFLDLRSKLVISTGAGIS 120
           SR+ISVSFSSI GEK HQNFLR EKVAPDSEPPSLKDVD LYNFLD RSKLV+S GAGIS
Sbjct: 61  SRDISVSFSSIKGEKPHQNFLRGEKVAPDSEPPSLKDVDLLYNFLDRRSKLVVSIGAGIS 120

Query: 121 MECGIPDYKSPNGAYSSGDRPIAHQ--CFCDPRTHTGKQPLEHKFALVTSRRAMNVSILS 180
           MECGIPDYKSPNGAYSSGDRPI+HQ           G   L     L+ SRRA+NVS+LS
Sbjct: 121 MECGIPDYKSPNGAYSSGDRPISHQHSASVTQEHMLGSSHLSTNSFLLLSRRALNVSVLS 180

Query: 181 LFFYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNKGSNN 240
           +F YGFS SISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNKGSNN
Sbjct: 181 MFLYGFSPSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNKGSNN 240

Query: 241 VGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVYEFEY 300
           VGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVYEFEY
Sbjct: 241 VGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVYEFEY 300

Query: 301 TVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAAPSS 358
           TVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAAPSS
Sbjct: 301 TVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAAPSS 359

[Close]

BLAST of CsaV3_2G019570.1 vs. NCBI nr
Match: XP_008460858.1 (PREDICTED: psbP domain-containing protein 2, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 565.1 bits (1455), Expect = 1.7e-157
Identity = 291/330 (88.18%), Postives = 300/330 (90.91%), Query Frame = 0


Query: 30  DTAQPIGQSWRLHRKGRCLISLYCSSRNVQTSRNISVSFSSINGEKTHQNFLRDEKVAPD 89
           +TAQPIGQSW LHRKGRCLISLYC SRNV+TSR+ISVSFSSI GEK HQNFLR EKVAPD
Sbjct: 8   NTAQPIGQSWGLHRKGRCLISLYCFSRNVETSRDISVSFSSIKGEKPHQNFLRGEKVAPD 67

Query: 90  SEPPSLKDVDFLYNFLDLRSKLVISTGAGISMECGIPDYKSPNGAYSSGDRPIAHQ--CF 149
           SEPPSLKDVD LYNFLD RSKLV+S GAGISMECGIPDYKSPNGAYSSGDRPI+HQ    
Sbjct: 68  SEPPSLKDVDLLYNFLDRRSKLVVSIGAGISMECGIPDYKSPNGAYSSGDRPISHQHSAS 127

Query: 150 CDPRTHTGKQPLEHKFALVTSRRAMNVSILSLFFYGFSTSISSAVFAEDFELERYTDSKE 209
                  G   L     L+ SRRA+NVS+LS+F YGFS SISSAVFAEDFELERYTDSKE
Sbjct: 128 VTQEHMLGSSHLSTNSFLLLSRRALNVSVLSMFLYGFSPSISSAVFAEDFELERYTDSKE 187

Query: 210 GFTLLRPSSWVKVDKAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQA 269
           GFTLLRPSSWVKVDKAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQA
Sbjct: 188 GFTLLRPSSWVKVDKAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQA 247

Query: 270 EKRKESTKDAAVVGVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNIS 329
           EKRKESTKDAAVVGVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNIS
Sbjct: 248 EKRKESTKDAAVVGVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNIS 307

Query: 330 HSDKPESPLDSQKRMMLEQVLHSFDAAPSS 358
           HSDKPESPLDSQKRMMLEQVLHSFDAAPSS
Sbjct: 308 HSDKPESPLDSQKRMMLEQVLHSFDAAPSS 337

[Close]

BLAST of CsaV3_2G019570.1 vs. NCBI nr
Match: XP_022148977.1 (psbP domain-containing protein 2, chloroplastic isoform X1 [Momordica charantia] >XP_022148978.1 psbP domain-containing protein 2, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 421.0 bits (1081), Expect = 4.0e-114
Identity = 233/357 (65.27%), Postives = 262/357 (73.39%), Query Frame = 0


Query: 1   MAILIQFPSNLQFFHSSSFARKLDGNIMGDTAQPIGQSWRLHRKGRCLISLYCSSRNVQT 60
           MAILIQ PSN+ FFH+    R+      G       +SW L  K   LISLYCSS NVQ+
Sbjct: 1   MAILIQLPSNILFFHTFQTQRE------GTCKHLARKSWPLLAKEGRLISLYCSSENVQS 60

Query: 61  SRNISVSFSSINGEKTHQNFLRDEKVAPDSEPPSLKDVDFLYNFLDLRSKLVISTGAGIS 120
              IS   SSIN  K   NFL D+K+  DS+P + K VD  YNFL+  +KL    GAG S
Sbjct: 61  LCKISEGSSSIN--KLPLNFLXDKKLVFDSDPHTKKAVDLSYNFLNQSTKLAALPGAGRS 120

Query: 121 MECGIPDYKSPNGAYSSGDRPIAHQCFCDPRTHTGKQPLEHKFALVTSRRAMNVSILSLF 180
            ECGI DY+S +                  +   G   L     L  +RR +N+S++SL 
Sbjct: 121 TECGIADYRSAS---------------VTQKRVLGSGHLRTSAPLFLTRRTLNLSVISLL 180

Query: 181 FYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNKGSNNVG 240
            YGFS +I +AVFA+D ELERYTDSKEGFTLLRPSSWVKV+KAGATVLFEE NKGSNNVG
Sbjct: 181 LYGFSPNICAAVFADDLELERYTDSKEGFTLLRPSSWVKVEKAGATVLFEEANKGSNNVG 240

Query: 241 VVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVYEFEYTV 300
           VVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSG+GG QVYEFEYT+
Sbjct: 241 VVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGDGGQQVYEFEYTI 300

Query: 301 DSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAAPSS 358
           DSTRGGMKR+FSAAFV+SKKLYILNISHSDKP+SPLDS +RMMLEQVLHSFDAAPSS
Sbjct: 301 DSTRGGMKRVFSAAFVSSKKLYILNISHSDKPDSPLDSHRRMMLEQVLHSFDAAPSS 334

[Close]

BLAST of CsaV3_2G019570.1 vs. TAIR10
Match: AT2G28605.1 (Photosystem II reaction center PsbP family protein)

HSP 1 Score: 245.0 bits (624), Expect = 7.2e-65
Identity = 130/188 (69.15%), Postives = 152/188 (80.85%), Query Frame = 0


Query: 168 SRRAMNVSILSLFFYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATV 227
           S+R +N+SIL+LFF GF    + A   E  EL+RYTDS  GFTLL PSS+ KV+KAGA  
Sbjct: 47  SKRHLNLSILTLFFNGFLLD-NKAKSME--ELQRYTDSNNGFTLLIPSSYTKVEKAGANA 106

Query: 228 LFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSG 287
           LFEE N GSNN+GVVV+PVR+ SL +FG+PQFVADKLI AEKRKESTK+A VV V ER+G
Sbjct: 107 LFEELNNGSNNIGVVVSPVRIKSLDQFGSPQFVADKLINAEKRKESTKEAEVVSVGERAG 166

Query: 288 EGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQV 347
             G QVYEFEY +DSTRGG+KR+FSAAFV+S KLY+LN+ HSDKPE+PLDS  RM LEQV
Sbjct: 167 L-GQQVYEFEYKIDSTRGGIKRVFSAAFVSSNKLYLLNVVHSDKPENPLDSSTRMSLEQV 226

Query: 348 LHSFDAAP 356
           LHSFDA P
Sbjct: 227 LHSFDALP 230

[Close]

BLAST of CsaV3_2G019570.1 vs. TAIR10
Match: AT5G09230.7 (sirtuin 2)

HSP 1 Score: 105.9 bits (263), Expect = 5.2e-23
Identity = 56/129 (43.41%), Postives = 80/129 (62.02%), Query Frame = 0


Query: 21  RKLDGNIMGDTAQPIGQSWRLHRKGRCLISLYCSSRN-VQTSRNISVSFSSINGE-KTHQ 80
           R++ G +  D   P    +R  + G  L+ L+   R  V+T+  +S+   S+  E K   
Sbjct: 7   RRVFGGVSTDLF-PSRSMYRPLQSGGNLVMLFKGCRRFVRTTCRVSIPGGSLGNESKAPP 66

Query: 81  NFLRDEKVAPDSEPPSLKDVDFLYNFLDLRSKLVISTGAGISMECGIPDYKSPNGAYSSG 140
            FLRD K+ PD++PP+++D+  LY   +  S+L I TGAG+S ECGIPDY+SPNGAYSSG
Sbjct: 67  RFLRDRKIVPDADPPNMEDIHKLYRLFEQSSRLTILTGAGVSTECGIPDYRSPNGAYSSG 126

Query: 141 DRPIAHQCF 148
            +PI HQ F
Sbjct: 127 FKPITHQEF 134

[Close]

BLAST of CsaV3_2G019570.1 vs. Swiss-Prot
Match: sp|Q8VY52|PPD2_ARATH (PsbP domain-containing protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD2 PE=1 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.3e-63
Identity = 130/188 (69.15%), Postives = 152/188 (80.85%), Query Frame = 0


Query: 168 SRRAMNVSILSLFFYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATV 227
           S+R +N+SIL+LFF GF    + A   E  EL+RYTDS  GFTLL PSS+ KV+KAGA  
Sbjct: 47  SKRHLNLSILTLFFNGFLLD-NKAKSME--ELQRYTDSNNGFTLLIPSSYTKVEKAGANA 106

Query: 228 LFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSG 287
           LFEE N GSNN+GVVV+PVR+ SL +FG+PQFVADKLI AEKRKESTK+A VV V ER+G
Sbjct: 107 LFEELNNGSNNIGVVVSPVRIKSLDQFGSPQFVADKLINAEKRKESTKEAEVVSVGERAG 166

Query: 288 EGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQV 347
             G QVYEFEY +DSTRGG+KR+FSAAFV+S KLY+LN+ HSDKPE+PLDS  RM LEQV
Sbjct: 167 L-GQQVYEFEYKIDSTRGGIKRVFSAAFVSSNKLYLLNVVHSDKPENPLDSSTRMSLEQV 226

Query: 348 LHSFDAAP 356
           LHSFDA P
Sbjct: 227 LHSFDALP 230

[Close]

BLAST of CsaV3_2G019570.1 vs. Swiss-Prot
Match: sp|Q94AQ6|SIR4_ARATH (NAD-dependent protein deacylase SRT2 OS=Arabidopsis thaliana OX=3702 GN=SRT2 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 9.4e-22
Identity = 56/129 (43.41%), Postives = 80/129 (62.02%), Query Frame = 0


Query: 21  RKLDGNIMGDTAQPIGQSWRLHRKGRCLISLYCSSRN-VQTSRNISVSFSSINGE-KTHQ 80
           R++ G +  D   P    +R  + G  L+ L+   R  V+T+  +S+   S+  E K   
Sbjct: 4   RRVFGGVSTDLF-PSRSMYRPLQSGGNLVMLFKGCRRFVRTTCRVSIPGGSLGNESKAPP 63

Query: 81  NFLRDEKVAPDSEPPSLKDVDFLYNFLDLRSKLVISTGAGISMECGIPDYKSPNGAYSSG 140
            FLRD K+ PD++PP+++D+  LY   +  S+L I TGAG+S ECGIPDY+SPNGAYSSG
Sbjct: 64  RFLRDRKIVPDADPPNMEDIHKLYRLFEQSSRLTILTGAGVSTECGIPDYRSPNGAYSSG 123

Query: 141 DRPIAHQCF 148
            +PI HQ F
Sbjct: 124 FKPITHQEF 131

[Close]

BLAST of CsaV3_2G019570.1 vs. Swiss-Prot
Match: sp|Q8R216|SIR4_MOUSE (NAD-dependent protein lipoamidase sirtuin-4, mitochondrial OS=Mus musculus OX=10090 GN=Sirt4 PE=1 SV=3)

HSP 1 Score: 50.8 bits (120), Expect = 3.6e-05
Identity = 28/59 (47.46%), Postives = 35/59 (59.32%), Query Frame = 0


Query: 88  PDSEPPSLKDVDFLYNFLDLRSKLVISTGAGISMECGIPDYKSPN-GAYSSGD-RPIAH 145
           P S P   + +  L  F+ L  KL++ TGAGIS E GIPDY+S   G Y+  D RPI H
Sbjct: 31  PPSPPLDPEKIKELQRFISLSKKLLVMTGAGISTESGIPDYRSEKVGLYARTDRRPIQH 89

[Close]

BLAST of CsaV3_2G019570.1 vs. Swiss-Prot
Match: sp|Q1JQC6|SIR4_BOVIN (NAD-dependent protein lipoamidase sirtuin-4, mitochondrial OS=Bos taurus OX=9913 GN=SIRT4 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 4.7e-05
Identity = 29/62 (46.77%), Postives = 36/62 (58.06%), Query Frame = 0


Query: 88  PDSEPPSLKDVDFLYNFLDLRSKLVISTGAGISMECGIPDYKSPN-GAYSSGD-RPIAHQ 147
           P S P   + V  L  F+ L  +L++ TGAGIS E GIPDY+S   G Y+  D RPI H 
Sbjct: 35  PPSPPLDPEKVKELQRFITLSKRLLVMTGAGISTESGIPDYRSEKVGLYARTDRRPIQHG 94

[Close]

BLAST of CsaV3_2G019570.1 vs. Swiss-Prot
Match: sp|Q9Y6E7|SIR4_HUMAN (NAD-dependent protein lipoamidase sirtuin-4, mitochondrial OS=Homo sapiens OX=9606 GN=SIRT4 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 6.1e-05
Identity = 29/62 (46.77%), Postives = 36/62 (58.06%), Query Frame = 0


Query: 88  PDSEPPSLKDVDFLYNFLDLRSKLVISTGAGISMECGIPDYKSPN-GAYSSGD-RPIAHQ 147
           P S P   + V  L  F+ L  +L++ TGAGIS E GIPDY+S   G Y+  D RPI H 
Sbjct: 34  PASPPLDPEKVKELQRFITLSKRLLVMTGAGISTESGIPDYRSEKVGLYARTDRRPIQHG 93

[Close]

BLAST of CsaV3_2G019570.1 vs. TrEMBL
Match: tr|A0A0A0LMF6|A0A0A0LMF6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G336660 PE=4 SV=1)

HSP 1 Score: 710.7 bits (1833), Expect = 1.7e-201
Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0


Query: 1   MAILIQFPSNLQFFHSSSFARKLDGNIMGDTAQPIGQSWRLHRKGRCLISLYCSSRNVQT 60
           MAILIQFPSNLQFFHSSSFARKLDGNIMGDTAQPIGQSWRLHRKGRCLISLYCSSRNVQT
Sbjct: 1   MAILIQFPSNLQFFHSSSFARKLDGNIMGDTAQPIGQSWRLHRKGRCLISLYCSSRNVQT 60

Query: 61  SRNISVSFSSINGEKTHQNFLRDEKVAPDSEPPSLKDVDFLYNFLDLRSKLVISTGAGIS 120
           SRNISVSFSSINGEKTHQNFLRDEKVAPDSEPPSLKDVDFLYNFLDLRSKLVISTGAGIS
Sbjct: 61  SRNISVSFSSINGEKTHQNFLRDEKVAPDSEPPSLKDVDFLYNFLDLRSKLVISTGAGIS 120

Query: 121 MECGIPDYKSPNGAYSSGDRPIAHQCFCDPRTHTGKQPLEHKFALVTSRRAMNVSILSLF 180
           MECGIPDYKSPNGAYSSGDRPIAHQCFCDPRTHTGKQPLEHKFALVTSRRAMNVSILSLF
Sbjct: 121 MECGIPDYKSPNGAYSSGDRPIAHQCFCDPRTHTGKQPLEHKFALVTSRRAMNVSILSLF 180

Query: 181 FYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNKGSNNVG 240
           FYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNKGSNNVG
Sbjct: 181 FYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNKGSNNVG 240

Query: 241 VVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVYEFEYTV 300
           VVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVYEFEYTV
Sbjct: 241 VVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVYEFEYTV 300

Query: 301 DSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAAPSS 358
           DSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAAPSS
Sbjct: 301 DSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAAPSS 357

[Close]

BLAST of CsaV3_2G019570.1 vs. TrEMBL
Match: tr|A0A1S3CCX5|A0A1S3CCX5_CUCME (psbP domain-containing protein 2, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499609 PE=4 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 4.6e-175
Identity = 320/359 (89.14%), Postives = 329/359 (91.64%), Query Frame = 0


Query: 1   MAILIQFPSNLQFFHSSSFARKLDGNIMGDTAQPIGQSWRLHRKGRCLISLYCSSRNVQT 60
           MA+LIQFPSNLQFFHSSSFARKLDGNIMGDTAQPIGQSW LHRKGRCLISLYC SRNV+T
Sbjct: 1   MAMLIQFPSNLQFFHSSSFARKLDGNIMGDTAQPIGQSWGLHRKGRCLISLYCFSRNVET 60

Query: 61  SRNISVSFSSINGEKTHQNFLRDEKVAPDSEPPSLKDVDFLYNFLDLRSKLVISTGAGIS 120
           SR+ISVSFSSI GEK HQNFLR EKVAPDSEPPSLKDVD LYNFLD RSKLV+S GAGIS
Sbjct: 61  SRDISVSFSSIKGEKPHQNFLRGEKVAPDSEPPSLKDVDLLYNFLDRRSKLVVSIGAGIS 120

Query: 121 MECGIPDYKSPNGAYSSGDRPIAHQ--CFCDPRTHTGKQPLEHKFALVTSRRAMNVSILS 180
           MECGIPDYKSPNGAYSSGDRPI+HQ           G   L     L+ SRRA+NVS+LS
Sbjct: 121 MECGIPDYKSPNGAYSSGDRPISHQHSASVTQEHMLGSSHLSTNSFLLLSRRALNVSVLS 180

Query: 181 LFFYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNKGSNN 240
           +F YGFS SISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNKGSNN
Sbjct: 181 MFLYGFSPSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNKGSNN 240

Query: 241 VGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVYEFEY 300
           VGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVYEFEY
Sbjct: 241 VGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVYEFEY 300

Query: 301 TVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAAPSS 358
           TVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAAPSS
Sbjct: 301 TVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAAPSS 359

[Close]

BLAST of CsaV3_2G019570.1 vs. TrEMBL
Match: tr|A0A1S3CDD9|A0A1S3CDD9_CUCME (psbP domain-containing protein 2, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499609 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.1e-157
Identity = 291/330 (88.18%), Postives = 300/330 (90.91%), Query Frame = 0


Query: 30  DTAQPIGQSWRLHRKGRCLISLYCSSRNVQTSRNISVSFSSINGEKTHQNFLRDEKVAPD 89
           +TAQPIGQSW LHRKGRCLISLYC SRNV+TSR+ISVSFSSI GEK HQNFLR EKVAPD
Sbjct: 8   NTAQPIGQSWGLHRKGRCLISLYCFSRNVETSRDISVSFSSIKGEKPHQNFLRGEKVAPD 67

Query: 90  SEPPSLKDVDFLYNFLDLRSKLVISTGAGISMECGIPDYKSPNGAYSSGDRPIAHQ--CF 149
           SEPPSLKDVD LYNFLD RSKLV+S GAGISMECGIPDYKSPNGAYSSGDRPI+HQ    
Sbjct: 68  SEPPSLKDVDLLYNFLDRRSKLVVSIGAGISMECGIPDYKSPNGAYSSGDRPISHQHSAS 127

Query: 150 CDPRTHTGKQPLEHKFALVTSRRAMNVSILSLFFYGFSTSISSAVFAEDFELERYTDSKE 209
                  G   L     L+ SRRA+NVS+LS+F YGFS SISSAVFAEDFELERYTDSKE
Sbjct: 128 VTQEHMLGSSHLSTNSFLLLSRRALNVSVLSMFLYGFSPSISSAVFAEDFELERYTDSKE 187

Query: 210 GFTLLRPSSWVKVDKAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQA 269
           GFTLLRPSSWVKVDKAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQA
Sbjct: 188 GFTLLRPSSWVKVDKAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQA 247

Query: 270 EKRKESTKDAAVVGVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNIS 329
           EKRKESTKDAAVVGVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNIS
Sbjct: 248 EKRKESTKDAAVVGVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNIS 307

Query: 330 HSDKPESPLDSQKRMMLEQVLHSFDAAPSS 358
           HSDKPESPLDSQKRMMLEQVLHSFDAAPSS
Sbjct: 308 HSDKPESPLDSQKRMMLEQVLHSFDAAPSS 337

[Close]

BLAST of CsaV3_2G019570.1 vs. TrEMBL
Match: tr|A0A0F7GXN9|A0A0F7GXN9_9ROSI (PsbP domain-OEC23 like protein (Fragment) OS=Pelargonium echinatum OX=122254 GN=PPD2 PE=2 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.2e-79
Identity = 154/198 (77.78%), Postives = 177/198 (89.39%), Query Frame = 0


Query: 160 EHKFALVTSRRAMNVSILSLFFYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVK 219
           E   ++  S+R++N+SIL+LFF GF  ++S   +AE+ EL+RYTDSKEGFTLL PSS+ K
Sbjct: 21  ELNLSISFSKRSLNLSILALFFNGFLPNLSKCAYAEELELQRYTDSKEGFTLLIPSSFNK 80

Query: 220 VDKAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAV 279
           V+KAGATVLFEE  KGSNNVGVVVNPVRL+SLGEFGTP+FV +KLIQAEKRKESTKDA V
Sbjct: 81  VEKAGATVLFEEEGKGSNNVGVVVNPVRLSSLGEFGTPEFVVEKLIQAEKRKESTKDAEV 140

Query: 280 VGVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQ 339
           +GVAERSG+GGLQVYEFEY VDSTRGGMKRIFSAAFVASKKLY+LNI+HSDKPESPLD+Q
Sbjct: 141 IGVAERSGQGGLQVYEFEYKVDSTRGGMKRIFSAAFVASKKLYLLNIAHSDKPESPLDTQ 200

Query: 340 KRMMLEQVLHSFDAAPSS 358
            RMMLEQVLHSFDAAP +
Sbjct: 201 TRMMLEQVLHSFDAAPQT 218

[Close]

BLAST of CsaV3_2G019570.1 vs. TrEMBL
Match: tr|A0A0F7CYP2|A0A0F7CYP2_9ROSI (PsbP domain-OEC23 like protein OS=Pelargonium citronellum OX=73188 GN=PPD2 PE=2 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.1e-78
Identity = 152/198 (76.77%), Postives = 176/198 (88.89%), Query Frame = 0


Query: 160 EHKFALVTSRRAMNVSILSLFFYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVK 219
           E   ++  S+R++N SIL+LFF GF  ++S   +AE+ EL+RYTDSKEGFTLL PSS+ K
Sbjct: 58  EPNLSISFSKRSLNFSILALFFNGFLPNLSKCAYAEELELQRYTDSKEGFTLLIPSSFNK 117

Query: 220 VDKAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAV 279
           V+KAGATVLFE+  KGSNNVGVVVNPVRL+SLGEFGTP+FV +KLIQAEKRKESTKDA V
Sbjct: 118 VEKAGATVLFEQEGKGSNNVGVVVNPVRLSSLGEFGTPKFVVEKLIQAEKRKESTKDAEV 177

Query: 280 VGVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQ 339
           +GVAERSG+GGLQVYEFEY VDSTRGGMKRIFSAAFVASKKLY+LNI+HSD+PESPLD+Q
Sbjct: 178 IGVAERSGQGGLQVYEFEYKVDSTRGGMKRIFSAAFVASKKLYLLNIAHSDRPESPLDAQ 237

Query: 340 KRMMLEQVLHSFDAAPSS 358
            RMMLEQVLHSFDAAP +
Sbjct: 238 TRMMLEQVLHSFDAAPQT 255

The following BLAST results are available for this feature:

BLAST of CsaV3_2G019570.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147342.1	2.5e-201	100.00	PREDICTED: psbP domain-containing protein 2, chloroplastic isoform X1 [Cucumis s...	[more]
XP_011649436.1	1.4e-183	99.70	PREDICTED: psbP domain-containing protein 2, chloroplastic isoform X2 [Cucumis s...	[more]
XP_008460857.1	7.0e-175	89.14	PREDICTED: psbP domain-containing protein 2, chloroplastic isoform X1 [Cucumis m...	[more]
XP_008460858.1	1.7e-157	88.18	PREDICTED: psbP domain-containing protein 2, chloroplastic isoform X2 [Cucumis m...	[more]
XP_022148977.1	4.0e-114	65.27	psbP domain-containing protein 2, chloroplastic isoform X1 [Momordica charantia]...	[more]

BLAST of CsaV3_2G019570.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G28605.1	7.2e-65	69.15	Photosystem II reaction center PsbP family protein	[more]
AT5G09230.7	5.2e-23	43.41	sirtuin 2	[more]

BLAST of CsaV3_2G019570.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8VY52\|PPD2_ARATH	1.3e-63	69.15	PsbP domain-containing protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q94AQ6\|SIR4_ARATH	9.4e-22	43.41	NAD-dependent protein deacylase SRT2 OS=Arabidopsis thaliana OX=3702 GN=SRT2 PE=...	[more]
sp\|Q8R216\|SIR4_MOUSE	3.6e-05	47.46	NAD-dependent protein lipoamidase sirtuin-4, mitochondrial OS=Mus musculus OX=10...	[more]
sp\|Q1JQC6\|SIR4_BOVIN	4.7e-05	46.77	NAD-dependent protein lipoamidase sirtuin-4, mitochondrial OS=Bos taurus OX=9913...	[more]
sp\|Q9Y6E7\|SIR4_HUMAN	6.1e-05	46.77	NAD-dependent protein lipoamidase sirtuin-4, mitochondrial OS=Homo sapiens OX=96...	[more]

BLAST of CsaV3_2G019570.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LMF6\|A0A0A0LMF6_CUCSA	1.7e-201	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G336660 PE=4 SV=1	[more]
tr\|A0A1S3CCX5\|A0A1S3CCX5_CUCME	4.6e-175	89.14	psbP domain-containing protein 2, chloroplastic isoform X1 OS=Cucumis melo OX=36...	[more]
tr\|A0A1S3CDD9\|A0A1S3CDD9_CUCME	1.1e-157	88.18	psbP domain-containing protein 2, chloroplastic isoform X2 OS=Cucumis melo OX=36...	[more]
tr\|A0A0F7GXN9\|A0A0F7GXN9_9ROSI	1.2e-79	77.78	PsbP domain-OEC23 like protein (Fragment) OS=Pelargonium echinatum OX=122254 GN=...	[more]
tr\|A0A0F7CYP2\|A0A0F7CYP2_9ROSI	1.1e-78	76.77	PsbP domain-OEC23 like protein OS=Pelargonium citronellum OX=73188 GN=PPD2 PE=2 ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

Vocabulary: **Cellular Component**
Term	Definition
GO:0019898	extrinsic component of membrane
GO:0009654	photosystem II oxygen evolving complex
GO:0009523	photosystem II

Vocabulary: **INTERPRO**
Term	Definition
IPR029035	DHS-like_NAD/FAD-binding_dom
IPR026590	Ssirtuin_cat_dom
IPR002683	PsbP
IPR016123	Mog1/PsbP_a/b/a-sand

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009654	photosystem II oxygen evolving complex
molecular_function	GO:0005509	calcium ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_2G019570	CsaV3_2G019570	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G019570.1	CsaV3_2G019570.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G019570.1.cds8	CsaV3_2G019570.1.cds8	CDS
CsaV3_2G019570.1.cds7	CsaV3_2G019570.1.cds7	CDS
CsaV3_2G019570.1.cds6	CsaV3_2G019570.1.cds6	CDS
CsaV3_2G019570.1.cds5	CsaV3_2G019570.1.cds5	CDS
CsaV3_2G019570.1.cds4	CsaV3_2G019570.1.cds4	CDS
CsaV3_2G019570.1.cds3	CsaV3_2G019570.1.cds3	CDS
CsaV3_2G019570.1.cds2	CsaV3_2G019570.1.cds2	CDS
CsaV3_2G019570.1.cds1	CsaV3_2G019570.1.cds1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G019570.1.exon8	CsaV3_2G019570.1.exon8	exon
CsaV3_2G019570.1.exon7	CsaV3_2G019570.1.exon7	exon
CsaV3_2G019570.1.exon6	CsaV3_2G019570.1.exon6	exon
CsaV3_2G019570.1.exon5	CsaV3_2G019570.1.exon5	exon
CsaV3_2G019570.1.exon4	CsaV3_2G019570.1.exon4	exon
CsaV3_2G019570.1.exon3	CsaV3_2G019570.1.exon3	exon
CsaV3_2G019570.1.exon2	CsaV3_2G019570.1.exon2	exon
CsaV3_2G019570.1.exon1	CsaV3_2G019570.1.exon1	exon

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.50.1220		coord: 95..177 e-value: 1.9E-9 score: 39.1
None	No IPR available	PANTHER	PTHR31407:SF3	PSBP DOMAIN-CONTAINING PROTEIN 2, CHLOROPLASTIC	coord: 160..355
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 160..355
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	GENE3D	G3DSA:3.40.1000.10		coord: 194..353 e-value: 1.9E-32 score: 114.4
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	SSF55724	Mog1p/PsbP-like	coord: 200..353
IPR002683	PsbP family	PFAM	PF01789	PsbP	coord: 199..352 e-value: 1.6E-33 score: 116.0
IPR026590	Sirtuin family, catalytic core domain	PROSITE	PS50305	SIRTUIN	coord: 99..357 score: 9.512
IPR029035	DHS-like NAD/FAD-binding domain superfamily	SUPERFAMILY	SSF52467	DHS-like NAD/FAD-binding domain	coord: 82..138