CsaV3_2G017020.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGTTTGTGCTTCCACTCAAACACCACTAACAAGGAATCCCAAATGCGGAGTCAAATTCCCCAAACAACAACAACAACAGCAACAATTATTGAATCTAGATTCAATCAAGGTCGTTCACATGGACGGCTTCATCGAGGAATTTTCCGATCCAATCAAAGCCTCCAAAATCACATCTCGTAACCCTAATTTCTTCCTCTGTAACTCAGAGCAAATGTTAATCGGTAGCTGTGTTCCTTCTCTTTCCAGCGACGAAAATCTTCAAATGGGTCAAATCTACTTCCTCCTCCCTCTCTCTCTCGCTCATTCCCCTCTTTCTCTCCCTGATCTCTGCAATTTCGCCATTAAAGCTTCCTCTGCTCTTCGAAACATTCAATCTTCCTTATTCAGGTAATCGTGTAATTCGTTGGATTTGCTTGCTTGACAATGTGATGGGTTTCGATGTCGGAGTCATTTTAGTTAATTGTTATTATTGTTGATCGGATTATTACAAAGTCAAGTGGTGAATTCAGAAAATGGATCGATGGATTCGTTCTTTTTTTCATATTTGTTATTATGATTATTGTTCCGTTTTTTTGTTGGCGGAATTAGATTGATTGAAGAATTGTTGTAATAGTTTTGTTTATTTGATTTGTTAGTGTGTGTGTATGAAAAGGAAATTGAAAAAGCAAAAAGCTCCTTTGGGATTCTCATATACTAAACGACACCGTTAATAATTCAAATCTCTCTTTTTCTTTCTTTTCTAAAAGTAATTCACATTTGCTTTATAAGTTCACATATATATATATATATATATATAAACATATTATTTTAATCTTTATTTTTTGAACAACATTTAATTTTAGTTGTTGTACTTCATATAAAATTTGAAACTATACTTATCTTTTACGGTGTTGGATGAAAAATTTATGAAATTGGGACTAATGTGTTACGACTCTATTCTTTGATAAAAACGAATCTTTGGTGTTACTGCGCATATGTTTCAAAAGAAATATAAATTTTGACTAAAATTGGAGTTAAAAGAAATAATATTTTGTTCATTTGGGATTCCTTGAATGATGCATTTAAAAAATAATATATAAATTTTAAAGCTAAATGTCTGACCACCCGGCGAAAGTGCGACACAAATGGTTCTTGACTCATACGAGTGACTACTATACATAAACACATCATATTACACAGTCGAATAAATGTGTATGGCCCATTATGTACAAAGGTGGTAGATAGTTGGAATTAATGTATATGATGCTTCATACATATTATATACTTAACCTTTTGGCAACAAACAACTCATAAGTTAGATGAACTAGTGTGCAATGTGAATGATCGTTGTACCTTGTAAGATATGGCACATGGTCATATAGACCGATTAAATAAATAGAGTGGACATATCTCAAATCTCACGCTACTATCACATAAATCATAAAATGTGTGCACAACAAACCTTCCAAAAAGATATTAACCTGCACATGAATATCTTATATTTGTTGTAATTTTGGTAATTAACTCACGTTCGGCTTATGTGTTTGTTGATATTTGTTTGAAGCGTATTGGGCACATTGATGGTTTGTGTGATGTGAATGTGCATGACACGAGCCCTGAGTTGTGAGATATGTACTGTGTGATATGTGTCTATGTGACCATGTTGCATATCTCACAAACTACAATGAGTTATGCACATACTATCATGTGCTAACTTGTGGGTTGTTCGTTACTAAAGTCTTGAGTATATATTGACAATTTGTGTGATGTGTGTCTCAACACCTACACTTAATATTTTACCTCTTTTGTGAACACAATACACATATATGTTTATAACTCTGTGACATATGCTTGTATATGATGGACTACGTACACATTTGTTTGATCATGCAACTTATTCATGTATAGTGGACGGGTCACTTACCAATATAGCTCCCCAATGAGCTATCTTAGTACCTCTAATCTCACTAGTTTATAATGCTTAATAAACAAGTTGTGAATCCTCTCAATACTTCGAGTTGTTTGTATGAAAGTAACTTAAATTAAAACAATCCCTTGACTTTCAAAAAAGAAATCCTAACTCTTTCCAAATGTGAATCGCTTACCGTTTTGGACGGTACGAATGTTTATTATATATATATTCATTAATTTAGAGAAAAGAGATGTTGATGGTGGGTTGTTTTATTTTATTTAAATATAAAAAGTAGGTGATTGAACTTGACAAAATTGTATGGTTGTTGACTTTATTGAGTATGGGGTTCCTATGGGCGTCAAGTTTCAAGTTCTTCATTTTTCAATTATAACACCAATGTGAAATGGAACCTAATTACAAATATCATAAAGTAATTATCTAATTTACACTTTAGAAACTAGGCCTCTCATGAGTGGACATAGAAGCCCATTGTTTGTACCTTAGAAAACTATTCCTCTCACGACTGGACAGTGTATAACTCTTAAAAGTCCACTCATTTGCTAATAATCCACCAAACCCCATTCAAAAGCCCATGAAAAATACTTGAAAGCAGAAGACTTTACAACTCAAACAGTAGACTCTTCTAACCATTTCAAAACAACTGCATGCTTACTAAGTACACTCCCATTACATTGAATTGTTCAGACCTGGGTAACCATCTTAACACAACTAAACATTAAGGCCTAAGATAACTAATATTGAGAGATCTAAGTTAAATGGCTTCCTAATAAGTAGGTTTCGTTCAATTGACTTTGCAACGGTTGGAGGAGTCTAAGTTTGTTTGGTTTGAGGGGAACTCACACTTAGGAAGCCTAAGTAAAGTTGTTTGATGTGCGTTTCAAACAAATTTTGAGAGCACTTATCCTAATTAAACATTAAAGAATAGGTCATACGAGAGTCTCCCTAGAAAGTGTGAGTTTGATAAATAACTATTTTAACTCTTTTAGTTAAGTTTCTTTCCTCTAAAACATTGCTCTACATAGTAGGTGATATAGTATACTTAACAAGGTTACCAATTTCTTTGTCCCTCTTCTACTATTCACTTTTGTTGTTCATATTGTTACAACATTTTGTGTGTGACTTTGGTTGTTATGTATACACGATTCATCTAATTCTCACTTGGATTAGGTTTGAAGAAGTTAAATCAAGCTAA ATGGGGGTTTGTGCTTCCACTCAAACACCACTAACAAGGAATCCCAAATGCGGAGTCAAATTCCCCAAACAACAACAACAACAGCAACAATTATTGAATCTAGATTCAATCAAGGTCGTTCACATGGACGGCTTCATCGAGGAATTTTCCGATCCAATCAAAGCCTCCAAAATCACATCTCGTAACCCTAATTTCTTCCTCTGTAACTCAGAGCAAATGTTAATCGGTAGCTGTGTTCCTTCTCTTTCCAGCGACGAAAATCTTCAAATGGGTCAAATCTACTTCCTCCTCCCTCTCTCTCTCGCTCATTCCCCTCTTTCTCTCCCTGATCTCTGCAATTTCGCCATTAAAGCTTCCTCTGCTCTTCGAAACATTCAATCTTCCTTATTCAGGTTTGAAGAAGTTAAATCAAGCTAA ATGGGGGTTTGTGCTTCCACTCAAACACCACTAACAAGGAATCCCAAATGCGGAGTCAAATTCCCCAAACAACAACAACAACAGCAACAATTATTGAATCTAGATTCAATCAAGGTCGTTCACATGGACGGCTTCATCGAGGAATTTTCCGATCCAATCAAAGCCTCCAAAATCACATCTCGTAACCCTAATTTCTTCCTCTGTAACTCAGAGCAAATGTTAATCGGTAGCTGTGTTCCTTCTCTTTCCAGCGACGAAAATCTTCAAATGGGTCAAATCTACTTCCTCCTCCCTCTCTCTCTCGCTCATTCCCCTCTTTCTCTCCCTGATCTCTGCAATTTCGCCATTAAAGCTTCCTCTGCTCTTCGAAACATTCAATCTTCCTTATTCAGGTTTGAAGAAGTTAAATCAAGCTAA MGVCASTQTPLTRNPKCGVKFPKQQQQQQQLLNLDSIKVVHMDGFIEEFSDPIKASKITSRNPNFFLCNSEQMLIGSCVPSLSSDENLQMGQIYFLLPLSLAHSPLSLPDLCNFAIKASSALRNIQSSLFRFEEVKSS
BLAST of CsaV3_2G017020.1 vs. NCBI nr
Match: KGN62025.1 (hypothetical protein Csa_2G287070 [Cucumis sativus]) HSP 1 Score: 250.8 bits (639), Expect = 2.8e-63 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of CsaV3_2G017020.1 vs. NCBI nr
Match: XP_008457799.2 (PREDICTED: uncharacterized protein LOC103497401 [Cucumis melo]) HSP 1 Score: 229.2 bits (583), Expect = 8.7e-57 Identity = 121/134 (90.30%), Postives = 125/134 (93.28%), Query Frame = 0
BLAST of CsaV3_2G017020.1 vs. NCBI nr
Match: XP_022158695.1 (uncharacterized protein LOC111025158 [Momordica charantia]) HSP 1 Score: 164.5 bits (415), Expect = 2.6e-37 Identity = 87/132 (65.91%), Postives = 102/132 (77.27%), Query Frame = 0
BLAST of CsaV3_2G017020.1 vs. NCBI nr
Match: XP_021275319.1 (uncharacterized protein LOC110410065 [Herrania umbratica]) HSP 1 Score: 125.2 bits (313), Expect = 1.8e-25 Identity = 66/126 (52.38%), Postives = 81/126 (64.29%), Query Frame = 0
BLAST of CsaV3_2G017020.1 vs. NCBI nr
Match: POO02630.1 (hypothetical protein TorRG33x02_016160 [Trema orientalis]) HSP 1 Score: 122.9 bits (307), Expect = 8.8e-25 Identity = 67/134 (50.00%), Postives = 90/134 (67.16%), Query Frame = 0
BLAST of CsaV3_2G017020.1 vs. TAIR10
Match: AT5G66580.1 (unknown protein) HSP 1 Score: 83.6 bits (205), Expect = 1.1e-16 Identity = 38/91 (41.76%), Postives = 61/91 (67.03%), Query Frame = 0
BLAST of CsaV3_2G017020.1 vs. TAIR10
Match: AT2G23690.1 (unknown protein) HSP 1 Score: 78.2 bits (191), Expect = 4.5e-15 Identity = 36/85 (42.35%), Postives = 54/85 (63.53%), Query Frame = 0
BLAST of CsaV3_2G017020.1 vs. TAIR10
Match: AT3G50800.1 (unknown protein) HSP 1 Score: 74.3 bits (181), Expect = 6.5e-14 Identity = 34/88 (38.64%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of CsaV3_2G017020.1 vs. TAIR10
Match: AT4G37240.1 (unknown protein) HSP 1 Score: 73.2 bits (178), Expect = 1.4e-13 Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 0
BLAST of CsaV3_2G017020.1 vs. TAIR10
Match: AT1G21010.1 (unknown protein) HSP 1 Score: 64.7 bits (156), Expect = 5.2e-11 Identity = 32/102 (31.37%), Postives = 60/102 (58.82%), Query Frame = 0
BLAST of CsaV3_2G017020.1 vs. TrEMBL
Match: tr|A0A0A0LJJ9|A0A0A0LJJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287070 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.8e-63 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of CsaV3_2G017020.1 vs. TrEMBL
Match: tr|A0A1S3C6C0|A0A1S3C6C0_CUCME (uncharacterized protein LOC103497401 OS=Cucumis melo OX=3656 GN=LOC103497401 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 5.8e-57 Identity = 121/134 (90.30%), Postives = 125/134 (93.28%), Query Frame = 0
BLAST of CsaV3_2G017020.1 vs. TrEMBL
Match: tr|A0A2P5FXX1|A0A2P5FXX1_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_016160 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 5.8e-25 Identity = 67/134 (50.00%), Postives = 90/134 (67.16%), Query Frame = 0
BLAST of CsaV3_2G017020.1 vs. TrEMBL
Match: tr|A0A2C9UTH4|A0A2C9UTH4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G133100 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.2e-24 Identity = 67/126 (53.17%), Postives = 83/126 (65.87%), Query Frame = 0
BLAST of CsaV3_2G017020.1 vs. TrEMBL
Match: tr|A0A2N9I9K0|A0A2N9I9K0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50519 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 3.8e-24 Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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