CsaV3_2G010190.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTCCATTCTTATTTTTTTTCCACAATAATAACTCACTTTCTTTCCCTTGATGACAATTCATCTTTTTATATATATCTTCAACCCTTCAACACAAGAATTGGGAGAGAAAAAACAAAGGTTCAATGGGAGGCATTGCTTGGACTGAAGAAGAAGATTACTTACTCAAGAAATGCATTGAACAATATGGAGAAGGGAAATGGCATCGTGTTCCTCAATTGGCTGGTTTGTTTCATTTTGCTTTTTCTACCTTTCATAGTTGCTTTATTTATATTTTTGTCTTTATAGTTTTCTATATAAACTCACTGATTTCCATGTTTGATCATAACAAGATAAAATGGTGATTTCATCACTTCAAAATTTCCGAGTTTAGTTTGAGTGGTATATTACTTGCTATATGGTTTATGCTCGTATCATTAATTCAAATTTTCAAAAAAAAATTGTGAGTACCTACTCTCAATTGAAACATAGATTTTTTCGTTGTTAATTAATACATTCACATGTTAGCTAAGCTAGGATGACTTTGGCACAACAATTTTACTATATTAGTTACTATTGATAATATTTTTCTATAGTTGCGTCTAGTTGTCAAGAAACTCGAAAAAGAAAATGAAAAAAATTACTAAATTTTTCAATTTTAAAATTCTAGGTGTATAAATTTCACTAATATTCAAAGAAGATAGTATGTTCAAATAATATTTTGAAATGAATGAATATGTAAACAGCTAAATGGATTTCCATATACTGAAATCTGAGCTTCTGAAACTATACTTTTCTTTTGAATGCATTAATACAAAGTTAGCATATTGACGTACTTACATTTATTAGCACAAATTTATAAAAAAATGTTAGGTAAAAAAAAATATATAGATAGGTTTTATAGCCATTTTATAAAAATAATAATATAAAATCTTGATATACTTAAAAATACATCCATTTTAGTATGTCATTCAGTAAAGATATTCTAGTTTATATTCACATGTATTGGAAATGCTATGGACATTTAACTATACAGTGCTTTTAAAAAAAGTGAAGAGTCAAGTTGAATTTGAAAAACCAATCTTAGGTCGAAACCCCTCTCGATATCAATTTCATCATTTGTTAAAATTACCAATAACTAATCGAGGTCATTAAATGACAACTAAAGACAGGTGATCGATCTTCTACAAAATTGATAATTTGAATAATTGAGTTAGAAACATTTCTCAATCCAATCTAGACGAACTCGTGAACAATCTACTTCAAAAGATATTAATAAAACATTGAAATTGAGAGTTTCATAAATGTCATTGAATTTAGAAACAAGGGCAGATAATAGAGATGGTCCTCCAAAAAAACAAAGATGCAATGATGCACATGTGTGTCACCTACCTGTTAGCTTTGAATGCTGCATGTGGTGTGTGTATAATTTTGCATTGTCTATTTTAGGCATTTCTTTAAACACTTTATGAACTTGAGTTTGCATTTTGGTCACATTTAGGGAGCTAGCTATTTTTATCTATGTTTATTTAGACCATATGTTGTGAACATATGGGGCTAATGATAGTACCAAAGAAGAAAACGATGTTTTAAATATAGTTGGTGGCACTGTTTTTCAAACCTCACCATCAACCATTATTACTGCTTACTGTTTAAATCAAGGGTTAGGTTGAGAAAATAAACTTAAGAGGAAGAATTGGGTAAGTTATAAATTCTGAAAGTTTTTTCTTTCTTTTGTCCTAACTTCAAAGAAAATATATACTAATTATAATTTTTGAACTTTCATTTGAGTCTACTTAAAGTTGATCACGTTATTATTATATTGAAATGTTTTAGGTGATATCGTTGATTGAACAAAAACTCGATATACTTCACAACCATATTGTATAAAGTTATCATACATAAATTAAGTATAAAATATTAGAAGAATGAATTGGGAGAAAAAAAAAATAATGAGACAAATATATACATTTACTATATCCTTTAGGTTTAGACCCTACTTTAGTCTTTGTATTTTCCACATTCATGTACTTTCGTAATATCTATTGTGTCCACCCTTGAGGCTGGCCCCTCAATATGGTTGCTTGATCTTAAAGATTGGCCATGAGTGATTGAATGATGGTTAAATCTGTACTTAAAATCCATCAAGTTACTAAACTAAGAAAATGGATACTTTATATTTTTAACTCGCAAATAGATCAATTAATTTTTTATAAAAAAATCTACATGTCAAGAGACATGACTGAACATCAAATTCAAAGGTGTATTAGACATTTTTGAAGTTTTTTTCAATATCCGTGAATGTCCGGACCAATTTACGCCCACCACGACTAATCTTATGTGACAAGTGTGATCCTACAACATTTAGATGTCAAGAAAAATTCGTAGAGATGTAAATTTTAGGTAGGTGGCATATGAATTGAATCCAAAGCCTTAGTTAATGATATAGAATAGAAAATTAAAAGTTGATGAAACTAAATTTGTGATTAAAATTTTTCTAAACCAAGTTTTTGAACAAAAAAAATTCAAGATCTTATCACTACTCATGATCCATCCTATGGATGGGTTTTTGAAGTTAAATCCATAAGCATTGGTTTGTGTGTGAGTTGAATTGATTATGAGTTCAAAGAAATATCTATAAGTTAGTTGGTGTAAGAAGATTTTAGTTGTTTTTATGGTATAGTTTTTAAGAACTGATGGAAGTTAATTAGTGTGATTTTGGTGATTGTGAAAAAGGTTTAAACAGATGCAGAAAGAGTTGTAGACTAAGATGGTTAAATTACCTTCGTCCAAATATCAAAAGAGGAAGCTTTACACCACAAGAAGTTGACCTCATTCTTAACCTTCACAATATCCTCGGCAACAGGCAAGCTATAGAAAATTTTTAGATTCTATCACTTGATATAAACTGATAAACTTCTGTCACTGTCTATCAATATTACTAATAGAAACATATAATTGTCTATTAATGTTTATTATTGATAAAATCTAACGTTTGTTTTTGTCATTTTCCCTTCTTTTAAAATTAGAGTTATTTTTTGATTGTGCTATAATGTTTCACTTGAGGCTTCCTTTCAAATACACTATCATATCAACAAAATAGTAAACTATATAAGTATTATTGAAAATCTTATCCTATCATGGGTTAAGCTTTCACCCATAGATCAGGCTACCAATCAAATAAATTTGTTGTGATTCATATATGAGTAGTCTATTGCTATAGATTTCAATCGGACAACTTAAACATTTTATATGAGTTGAATAAAGTTAGCAAAATTTGAAATTTTTTTGAACTTATAGATGTTAGTACACATTTTTTATGGTTGTTATGTTTTAATTTGCAACTGTCTCTTTGGTTTTTGCCATGTTAGGTGGTCAATTATTGCAGGAAGATTGCCAGGAAGAACAGCAAACGACATAAAGAACTATTGGAATTGTCATTTGAGCAAAAAGTTGAATGGTCAGGGAGTTGAGAAGCCAAATTCCACCAAAGAAGGATCCAATTTTGGGAAACAGTCGAAGTGGAAGCCACTTCAAGAAGAAAGCAGCAAATCGAAAGGAAAAGAATACGTTGATGATGATCAAAATAATGAAAGCCAAGGAATATTGGTACAAAATAATCAGAATCAAAATACACAACCAATTGTTGTTGAACAAAATAGTAGCATGAGTTTAGGAAATATGCAAATGGACTTATTCCAATTTGATCAACAAGTGCTCAAAGCAATGGAGGATGAAGATGGCTGCAGTAAGAGGGAGCTTTGGGATGATTGGATCTCAGAGATGGATCTTTGGATTGATTCTTTGTGAGATTGAAGAAGGAAAATTTTTATATATTTTAGCTATCTATCTATATATATATATATATATTTCTCTTGCATGCATGCAACAACTCTACAGCATCTGAATACTAAAGGTTGCACTTATATTATCATGGAAACATCAAATAAAACTTTGTTTGTGG ATGGGAGGCATTGCTTGGACTGAAGAAGAAGATTACTTACTCAAGAAATGCATTGAACAATATGGAGAAGGGAAATGGCATCGTGTTCCTCAATTGGCTGGTTTAAACAGATGCAGAAAGAGTTGTAGACTAAGATGGTTAAATTACCTTCGTCCAAATATCAAAAGAGGAAGCTTTACACCACAAGAAGTTGACCTCATTCTTAACCTTCACAATATCCTCGGCAACAGGTGGTCAATTATTGCAGGAAGATTGCCAGGAAGAACAGCAAACGACATAAAGAACTATTGGAATTGTCATTTGAGCAAAAAGTTGAATGGTCAGGGAGTTGAGAAGCCAAATTCCACCAAAGAAGGATCCAATTTTGGGAAACAGTCGAAGTGGAAGCCACTTCAAGAAGAAAGCAGCAAATCGAAAGGAAAAGAATACGTTGATGATGATCAAAATAATGAAAGCCAAGGAATATTGGTACAAAATAATCAGAATCAAAATACACAACCAATTGTTGTTGAACAAAATAGTAGCATGAGTTTAGGAAATATGCAAATGGACTTATTCCAATTTGATCAACAAGTGCTCAAAGCAATGGAGGATGAAGATGGCTGCAGTAAGAGGGAGCTTTGGGATGATTGGATCTCAGAGATGGATCTTTGGATTGATTCTTTGTGA ATGGGAGGCATTGCTTGGACTGAAGAAGAAGATTACTTACTCAAGAAATGCATTGAACAATATGGAGAAGGGAAATGGCATCGTGTTCCTCAATTGGCTGGTTTAAACAGATGCAGAAAGAGTTGTAGACTAAGATGGTTAAATTACCTTCGTCCAAATATCAAAAGAGGAAGCTTTACACCACAAGAAGTTGACCTCATTCTTAACCTTCACAATATCCTCGGCAACAGGTGGTCAATTATTGCAGGAAGATTGCCAGGAAGAACAGCAAACGACATAAAGAACTATTGGAATTGTCATTTGAGCAAAAAGTTGAATGGTCAGGGAGTTGAGAAGCCAAATTCCACCAAAGAAGGATCCAATTTTGGGAAACAGTCGAAGTGGAAGCCACTTCAAGAAGAAAGCAGCAAATCGAAAGGAAAAGAATACGTTGATGATGATCAAAATAATGAAAGCCAAGGAATATTGGTACAAAATAATCAGAATCAAAATACACAACCAATTGTTGTTGAACAAAATAGTAGCATGAGTTTAGGAAATATGCAAATGGACTTATTCCAATTTGATCAACAAGTGCTCAAAGCAATGGAGGATGAAGATGGCTGCAGTAAGAGGGAGCTTTGGGATGATTGGATCTCAGAGATGGATCTTTGGATTGATTCTTTGTGA MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFTPQEVDLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGSNFGKQSKWKPLQEESSKSKGKEYVDDDQNNESQGILVQNNQNQNTQPIVVEQNSSMSLGNMQMDLFQFDQQVLKAMEDEDGCSKRELWDDWISEMDLWIDSL
BLAST of CsaV3_2G010190.1 vs. NCBI nr
Match: XP_004138976.1 (PREDICTED: transcription factor MYB1-like [Cucumis sativus]) HSP 1 Score: 418.3 bits (1074), Expect = 1.6e-113 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. NCBI nr
Match: XP_008441809.1 (PREDICTED: transcription factor MYB90-like [Cucumis melo]) HSP 1 Score: 351.3 bits (900), Expect = 2.4e-93 Identity = 193/223 (86.55%), Postives = 196/223 (87.89%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. NCBI nr
Match: XP_022933166.1 (transcription factor MYB1-like [Cucurbita moschata]) HSP 1 Score: 327.0 bits (837), Expect = 4.9e-86 Identity = 166/224 (74.11%), Postives = 179/224 (79.91%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. NCBI nr
Match: XP_022997553.1 (transcription factor MYB1-like [Cucurbita maxima]) HSP 1 Score: 326.6 bits (836), Expect = 6.4e-86 Identity = 165/224 (73.66%), Postives = 179/224 (79.91%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. NCBI nr
Match: XP_023520914.1 (transcription factor MYB1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 325.9 bits (834), Expect = 1.1e-85 Identity = 165/224 (73.66%), Postives = 179/224 (79.91%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. TAIR10
Match: AT1G66380.1 (myb domain protein 114) HSP 1 Score: 182.2 bits (461), Expect = 3.6e-46 Identity = 78/100 (78.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. TAIR10
Match: AT1G56650.1 (production of anthocyanin pigment 1) HSP 1 Score: 180.6 bits (457), Expect = 1.0e-45 Identity = 77/100 (77.00%), Postives = 88/100 (88.00%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. TAIR10
Match: AT1G66370.1 (myb domain protein 113) HSP 1 Score: 179.9 bits (455), Expect = 1.8e-45 Identity = 76/99 (76.77%), Postives = 86/99 (86.87%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. TAIR10
Match: AT1G66390.1 (myb domain protein 90) HSP 1 Score: 179.5 bits (454), Expect = 2.3e-45 Identity = 77/100 (77.00%), Postives = 88/100 (88.00%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. TAIR10
Match: AT1G22640.1 (myb domain protein 3) HSP 1 Score: 161.0 bits (406), Expect = 8.5e-40 Identity = 69/111 (62.16%), Postives = 91/111 (81.98%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. Swiss-Prot
Match: sp|Q9FNV8|MY114_ARATH (Transcription factor MYB114 OS=Arabidopsis thaliana OX=3702 GN=MYB114 PE=1 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 6.4e-45 Identity = 78/100 (78.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. Swiss-Prot
Match: sp|Q9FE25|MYB75_ARATH (Transcription factor MYB75 OS=Arabidopsis thaliana OX=3702 GN=MYB75 PE=1 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.9e-44 Identity = 77/100 (77.00%), Postives = 88/100 (88.00%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. Swiss-Prot
Match: sp|Q9FNV9|MY113_ARATH (Transcription factor MYB113 OS=Arabidopsis thaliana OX=3702 GN=MYB113 PE=1 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 3.2e-44 Identity = 76/99 (76.77%), Postives = 86/99 (86.87%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. Swiss-Prot
Match: sp|Q9ZTC3|MYB90_ARATH (Transcription factor MYB90 OS=Arabidopsis thaliana OX=3702 GN=MYB90 PE=1 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 4.2e-44 Identity = 77/100 (77.00%), Postives = 88/100 (88.00%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. Swiss-Prot
Match: sp|Q9S9K9|MYB3_ARATH (Transcription factor MYB3 OS=Arabidopsis thaliana OX=3702 GN=MYB3 PE=1 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.5e-38 Identity = 69/111 (62.16%), Postives = 91/111 (81.98%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. TrEMBL
Match: tr|A0A1S3B4A4|A0A1S3B4A4_CUCME (transcription factor MYB90-like OS=Cucumis melo OX=3656 GN=LOC103485861 PE=4 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 1.6e-93 Identity = 193/223 (86.55%), Postives = 196/223 (87.89%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. TrEMBL
Match: tr|A0A061F261|A0A061F261_THECC (Myb domain protein 113, putative OS=Theobroma cacao OX=3641 GN=TCM_026054 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 1.2e-56 Identity = 126/240 (52.50%), Postives = 150/240 (62.50%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. TrEMBL
Match: tr|A0A1U8KRM9|A0A1U8KRM9_GOSHI (transcription factor MYB114-like OS=Gossypium hirsutum OX=3635 GN=LOC107918333 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 2.8e-53 Identity = 117/226 (51.77%), Postives = 139/226 (61.50%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. TrEMBL
Match: tr|I3SDN3|I3SDN3_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 4.7e-53 Identity = 92/112 (82.14%), Postives = 105/112 (93.75%), Query Frame = 0
BLAST of CsaV3_2G010190.1 vs. TrEMBL
Match: tr|I3S6E6|I3S6E6_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 4.7e-53 Identity = 92/112 (82.14%), Postives = 105/112 (93.75%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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