CsaV3_2G007410.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCAATTTCGTGTAGAATTTGAGAAGTTAGAAAATTTATAGGGATATATATATATGATATAACAATAATAAACACACAATTTGAAATTTGCAATTTAAACCATAAGAACTAAATTTGCAATTTAACCATTTTCTAAATATAAACTATATTCATTAATAAATTAGTAATAGCTGATTGTGAACTAAATTTTAATGAATAAGTAGAATTAGTTTTATGATTTATAAATATACAGTATCATATAATCAAACAATTTAAAAAATTATAATCCAATTTCTGAATTCATCTTATTTATTTTTATTAGAAGGACTAGCTAGATAAGCATATAGATGATAAAATAGCTATCATAGTAGATGCGTAAATATAGAAAGTAAGTTAGAAAAACTATATATATATATATATGACATTATTATAAAAGTCTAAGAAAGGAGTTGAAGTTAGGCTTGAATAAGCCCTTTGGGTGCTTGAATTGCTCTTCTACAACAAAGTTGGTCCAACCAAGTTAGCCATCATTACAACTTACCAAAGAAACTAACTTTTTAAGACGTGTTTGATGATAAGATGGTTATTATAGTTCGTATTTAATAACTGCATAATAAAATAGTATGATACATAGTAATATTTGAGTTCGGTTTGTTGAATTAAACTCATTTTGTTTCGGCATCTTTCAATCCAATACTCATTTCTATCATTTTCACGTTTCAAGATTTTATTTTTATTTCGCTCCTAGATTCTCAATAATCTAATTACTTTTAAGCTCTCCATCTAGATCATGAATTTTCTACTCATAAGGTCTTAATAAAAAGTCCAAATTCAATAAATGTTTTAATAGTTGATCATTATAGTCTCGTTTAATTATTTTTTAAAAAAAGAAAATATTAAGTAATTGATTGAGTCTAATTTCAATTTGGATGTTCAGTTTCAAAATATGTTACAATTTTATCTTTAAAATTTGAATCAAGATTTTACATTTTTAAGGTCGATTTTGTACCAAATACTCATTTCAATCTTTTTTTAATGTGTATTCATTAATTTAAAATAATCAACCATTTGCTAGAAAAAAATAGTCAAAGCTTAATTGATTATAATTCTATTAAATAATCTAAATTAGTTATATAGATTAAAAGTGAGTATACTCAAGAATATAAATCTTAAATTCTAGAAATCAAATTGAAACAAAAGAATTAAAAATATAATTTTGTTGAAATTTAGAAATCATATAGAAACTACACCCATCATCCAGAGACGAAAGAAGTATTTCTCCTAATCCTTTGTCAAATCTTCATCCTGCTCCCTATAGGGCCGAGACGCTAACTAGCTGAACTAATAACCACATTAGGAGAGAAGCCAAATTGAAGTAGGTGAGATATAACTTTTAGTTTTGGTCAATACATCCAAGAGACGTAAGGAAAGGGTGTGTCTAACTCAAGAATTGAACCAAATTCCAAAGGTGTGAACATGGCCCATTGCCTTGCATCAAGCCATTGACTTGCCTTTTGATCTAAGAAGTGGCATATTTCTTGCCTTTCATTCCTATCTCTTCTCAAAATAATGATAATAAATAATAACACCATCATCATTTATCTAATCAAATTCAATTCTTAGCTTCCATTTATATATTAACTTCCCCACCCACCTCCCCCCCACAACCCAACTGTTTCTTCAACTTTTCCCTTTTACTCTCCTCTTCTTCACCAAACTTTTTTCACAATCATGAAGCTGCATCCTTTCTCTGCTCTCTTTACTGCTTCTCTTGCCTTCTTCTTCTTTGTTATCACTGCTGCCGATCCCGATTTGCTTCAGGACGTTTGCGTCGCGGATCTCGCTTCCGGTACCTACTTACTTCTCCTCTCCCTCTCCCTCTCCCCCCCATTTACTAGTTCAAGATGTATATGAACCTCTCTTTCTCTATTTCTATATTCATTCACTCAATTTTCTAAAATGGTTGCATAATCATTGGTTTCTAAGTTTTGGGTTTATGGGTTTTTGTTTTTTCGTAGTTCAGAGTAAAGGGTATAGGGTTTTTGTTCAGACAAGACATTTCACTATCTCTATTTTGGACTTGTGCATAATAGGAAGATTTGGTTTTGTTTTCTTTCAAAATGTCTCTATGTTGTTGAGTTAGAATTGAGCTTTGATTTGCTAATGGAGATGGTGTGTAAACATAGTTTCACACTGACTAGAAGGAAAGGAGGAACTAACAAGAAAAGTATCAAGATATCGTCCTATATAGAGATGGAATCAGATTGATTCAAAGAATTTCCAATGTTCTAATCCATGTTTAAGCTAAAACTAGACACCATTATAGGCTTTAATTTCGTACCATACCAGAATTGCCAAACAGTTAATATTTTGCAGATACTAACAATTGAATCAAAAACAGGAATCAAAGTAAACGGATTCACCTGCAAATCGAATTTCTCAGCAGACGATTTCTTCTTCAATGGATTAGCCAAACCAGGGGCCACAAACAATACCCTAGGATCGCGAGTAACCGGTGCCAACGTCCAATCAATCCCCGGTCTTAACACACTCGGCGTCTCCCTTGCCCGAATCGACTACGCTCCCGGCGGTCTGAACCCGCCACACACGCATCCACGCGCCACTGAGATCGTGTTCGTCCTGGAAGGCCAACTGGACGTCGGTTTCATAACAACCGGTAACGTTCTTGTCTCGAAATCGATCAAGAAGGGAGAGATCTTCGTTTTCCCGAAGGGATTGGTTCATTTCCAGAAAAACAACGGGAAGGTTCCGGCAGCGGTGATTGCGGCGTTTAATAGCCAGTTTCCGGGTACTCAATCGATTGCGGCGGCGCTTTTCGCGGCATCTCCGCCGGTGCCTGATAATGTGTTGACGAAGGCGTTTCAAGTTGGGACTAAGGAAGTTGAGAAGATCAAATCGAGGCTTGCACCGAAGTAATAATGGAGATTAAAAATTGGAAGAGAAAAATTTGTGTTTGGAATTTGATTACATTTGGTTGTTCTGATTGATTGTATTATTATTGTATCTCTGTTTTTTTCTTCTTTTTCTTCACTGATTGAATGAATAATAATAATTGGGATTTGGAGATTTGGAGATTTGTAATTTTTCACTGATTGATTCAATGCTTTAGGAAACTAATGGTAGAGTGTGTTGGGGTTTTTTTTACCCTTTCCATCAAATTTAGGGTGAAGCTATCAAAAGTCTAAGATATGCAAATTATTTCAACTAATTATGTCATACCTCAAATGTTCAAATCTTCCCCATCATATATAAATATCAATCTCCTTCTTCCAATTCATTCAATTATTTTCAAATTTTCTAAATTGCAA ATGAAGCTGCATCCTTTCTCTGCTCTCTTTACTGCTTCTCTTGCCTTCTTCTTCTTTGTTATCACTGCTGCCGATCCCGATTTGCTTCAGGACGTTTGCGTCGCGGATCTCGCTTCCGGAATCAAAGTAAACGGATTCACCTGCAAATCGAATTTCTCAGCAGACGATTTCTTCTTCAATGGATTAGCCAAACCAGGGGCCACAAACAATACCCTAGGATCGCGAGTAACCGGTGCCAACGTCCAATCAATCCCCGGTCTTAACACACTCGGCGTCTCCCTTGCCCGAATCGACTACGCTCCCGGCGGTCTGAACCCGCCACACACGCATCCACGCGCCACTGAGATCGTGTTCGTCCTGGAAGGCCAACTGGACGTCGGTTTCATAACAACCGGTAACGTTCTTGTCTCGAAATCGATCAAGAAGGGAGAGATCTTCGTTTTCCCGAAGGGATTGGTTCATTTCCAGAAAAACAACGGGAAGGTTCCGGCAGCGGTGATTGCGGCGTTTAATAGCCAGTTTCCGGGTACTCAATCGATTGCGGCGGCGCTTTTCGCGGCATCTCCGCCGGTGCCTGATAATGTGTTGACGAAGGCGTTTCAAGTTGGGACTAAGGAAGTTGAGAAGATCAAATCGAGGCTTGCACCGAAGTAA ATGAAGCTGCATCCTTTCTCTGCTCTCTTTACTGCTTCTCTTGCCTTCTTCTTCTTTGTTATCACTGCTGCCGATCCCGATTTGCTTCAGGACGTTTGCGTCGCGGATCTCGCTTCCGGAATCAAAGTAAACGGATTCACCTGCAAATCGAATTTCTCAGCAGACGATTTCTTCTTCAATGGATTAGCCAAACCAGGGGCCACAAACAATACCCTAGGATCGCGAGTAACCGGTGCCAACGTCCAATCAATCCCCGGTCTTAACACACTCGGCGTCTCCCTTGCCCGAATCGACTACGCTCCCGGCGGTCTGAACCCGCCACACACGCATCCACGCGCCACTGAGATCGTGTTCGTCCTGGAAGGCCAACTGGACGTCGGTTTCATAACAACCGGTAACGTTCTTGTCTCGAAATCGATCAAGAAGGGAGAGATCTTCGTTTTCCCGAAGGGATTGGTTCATTTCCAGAAAAACAACGGGAAGGTTCCGGCAGCGGTGATTGCGGCGTTTAATAGCCAGTTTCCGGGTACTCAATCGATTGCGGCGGCGCTTTTCGCGGCATCTCCGCCGGTGCCTGATAATGTGTTGACGAAGGCGTTTCAAGTTGGGACTAAGGAAGTTGAGAAGATCAAATCGAGGCTTGCACCGAAGTAA MKLHPFSALFTASLAFFFFVITAADPDLLQDVCVADLASGIKVNGFTCKSNFSADDFFFNGLAKPGATNNTLGSRVTGANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGQLDVGFITTGNVLVSKSIKKGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQFPGTQSIAAALFAASPPVPDNVLTKAFQVGTKEVEKIKSRLAPK
BLAST of CsaV3_2G007410.1 vs. NCBI nr
Match: XP_004144736.1 (PREDICTED: germin-like protein 5-1 [Cucumis sativus] >KGN61037.1 hypothetical protein Csa_2G035370 [Cucumis sativus]) HSP 1 Score: 427.2 bits (1097), Expect = 3.4e-116 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. NCBI nr
Match: XP_008453001.1 (PREDICTED: germin-like protein 5-1 [Cucumis melo]) HSP 1 Score: 408.3 bits (1048), Expect = 1.6e-110 Identity = 211/218 (96.79%), Postives = 212/218 (97.25%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. NCBI nr
Match: XP_023545313.1 (germin-like protein 5-1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 383.6 bits (984), Expect = 4.3e-103 Identity = 194/217 (89.40%), Postives = 205/217 (94.47%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. NCBI nr
Match: XP_022946061.1 (germin-like protein 5-1 [Cucurbita moschata]) HSP 1 Score: 382.1 bits (980), Expect = 1.3e-102 Identity = 194/217 (89.40%), Postives = 205/217 (94.47%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. NCBI nr
Match: XP_022938245.1 (germin-like protein 5-1 [Cucurbita moschata]) HSP 1 Score: 377.1 bits (967), Expect = 4.1e-101 Identity = 195/217 (89.86%), Postives = 200/217 (92.17%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. TAIR10
Match: AT3G62020.1 (germin-like protein 10) HSP 1 Score: 303.5 bits (776), Expect = 1.0e-82 Identity = 146/201 (72.64%), Postives = 171/201 (85.07%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. TAIR10
Match: AT1G09560.1 (germin-like protein 5) HSP 1 Score: 299.3 bits (765), Expect = 1.9e-81 Identity = 143/202 (70.79%), Postives = 170/202 (84.16%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. TAIR10
Match: AT1G02335.1 (germin-like protein subfamily 2 member 2 precursor) HSP 1 Score: 285.8 bits (730), Expect = 2.2e-77 Identity = 139/199 (69.85%), Postives = 165/199 (82.91%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. TAIR10
Match: AT5G26700.1 (RmlC-like cupins superfamily protein) HSP 1 Score: 250.4 bits (638), Expect = 1.0e-66 Identity = 119/199 (59.80%), Postives = 158/199 (79.40%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. TAIR10
Match: AT3G05930.1 (germin-like protein 8) HSP 1 Score: 248.1 bits (632), Expect = 5.2e-66 Identity = 116/197 (58.88%), Postives = 156/197 (79.19%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. Swiss-Prot
Match: sp|Q6I544|GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500 PE=2 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 1.2e-83 Identity = 150/196 (76.53%), Postives = 169/196 (86.22%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. Swiss-Prot
Match: sp|Q9M263|GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP10 PE=2 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 1.9e-81 Identity = 146/201 (72.64%), Postives = 171/201 (85.07%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. Swiss-Prot
Match: sp|P94014|GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4 PE=2 SV=2) HSP 1 Score: 299.3 bits (765), Expect = 3.5e-80 Identity = 143/202 (70.79%), Postives = 170/202 (84.16%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. Swiss-Prot
Match: sp|Q94EG3|NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae OX=164110 GN=NECI PE=1 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 1.3e-79 Identity = 143/194 (73.71%), Postives = 168/194 (86.60%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. Swiss-Prot
Match: sp|Q9SPV5|NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia OX=4092 GN=NEC1 PE=1 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 1.1e-78 Identity = 144/208 (69.23%), Postives = 173/208 (83.17%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. TrEMBL
Match: tr|A0A0A0LK24|A0A0A0LK24_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035370 PE=3 SV=1) HSP 1 Score: 427.2 bits (1097), Expect = 2.3e-116 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. TrEMBL
Match: tr|A0A1S3BUL7|A0A1S3BUL7_CUCME (germin-like protein 5-1 OS=Cucumis melo OX=3656 GN=LOC103493833 PE=3 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 1.1e-110 Identity = 211/218 (96.79%), Postives = 212/218 (97.25%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. TrEMBL
Match: tr|A0A2C9VH54|A0A2C9VH54_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G106400 PE=3 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 1.2e-93 Identity = 179/213 (84.04%), Postives = 189/213 (88.73%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. TrEMBL
Match: tr|A0A2I4DHL6|A0A2I4DHL6_9ROSI (germin-like protein subfamily 2 member 1 OS=Juglans regia OX=51240 GN=LOC108980233 PE=3 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 3.0e-92 Identity = 175/202 (86.63%), Postives = 182/202 (90.10%), Query Frame = 0
BLAST of CsaV3_2G007410.1 vs. TrEMBL
Match: tr|A0A2I4G258|A0A2I4G258_9ROSI (germin-like protein subfamily 2 member 1 OS=Juglans regia OX=51240 GN=LOC109004037 PE=3 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 3.9e-92 Identity = 179/212 (84.43%), Postives = 188/212 (88.68%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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