CsaV3_2G005300.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTGAGAGTAAACCAATAAAAGAAATGATGACTCAAATTTGAAAGATTAGCGGTTAGCAATCATCACCACAAAAAAACTCAGAAACTTTGAGTGAATTCATTCTATGGCTGACAGCTTAAAGCAGATATAGCTCTCACCTTGTTCATGGCTTCCTCATTCCCCAATCCTTCCTTCCCCCATTGTTCCTTCCTAATATCCAATTCAACCTCATCCACACATTTCCCCTTATCTTTTCCTCCAACTTCCCTCTCTGTCTTCCCTCAAATTTCATCTACCAAAAATGGGTCCGTTTCAAAAATTCATGGTAAGTTCGAGAAATTTCAAGGCGAGACTCCCCAAGACGATGTATTAGAAGCGAATCCGTCATTGTCGTTGCAACAACAGCTGAGTCAGGAGGTTGAAGAAGATGACAGGTTTCTCTTTTTCTCTTCCTCTTCAATATTTGTTCACTGAATCTTAGAGTTGATCATGGAAAGATTCTCTTCTGCTCTTAATTGATTGAATCATAAGTAGCTTCTAGGTTCAAAATGATGAACTTCATTCTGCATCCAAATTTCCAGATCGGTTTGGTATGAATCTTTAAGTGATTAAATAGAATTAGAAAGTTATTTCAATATAACTAAGAGCTATGGAGAAAAAATGGTGGATAATGAAGAACTAGGAAGTAGGAGCTTGGAAATATGTGTTTGTCAAATTTGCGTGGAAAACTGTGAACCTGAAGAAAAACTACTGTCTAATAAAAAGAAATCCGCTACAAACTGTTACGATTGCACAAATTAATTCTCTTTCAAATCCCAATTACAAGAATGCTCTCTTGAAGCTTGTGTACTATTCACACTCTTGAATTTCACTCTGAAATTAGAGAATTTAACTAGAGTTAGCACACTAAAGCTTAGAGTACTCCTAATTGGAACGATTAGAAACTAAATTAGTATTAGACTTCTTTTACGGTGTTTGGAGTTCATCACTTCCTTGAACCTTCTTGATATGGAAACAAATACTCTTCCAATATTGTGCCAAAACCCAATAGTTTTAATTATTTTAAAGCTAATGGAGGATTTGTGACCTAAAGTCTCTAGGAAGTCTCAAAATACTTTTAAATTATTGTTGATCATGGTGGATGTCTTGAAGTGGGAAATTCAGTTATCCATAAGGAGTGATCCATTGAGATTTTTGGAGGAAAAGGTGATAATGGTAGTAAGATATTCTCTAATGTCCACTTCAAGTTCCTGGATAGGAAATTTGAATGATTTTAAATCTTTGTAGGTTTACCAAAGAAGGGATAGGACCCTGAGCATAATTCAAGAAGTTGACTCTCTGGTACTCGATTAGAAGAAAGAACTAACTTAAGTTTAGCAATTGAAATAAGGCTTCAACTAATTGCCTTTGTTTCAGTGTCTGGTTATCAATATGGTTATTGTCAATCACTGTGGGTTGATCTAGTGATCATTAAAGGCCATGTAAATAGTAAAGGGCTTAGAGGAAATGAGTTAAACCACGGTGGTTTCATGTCTAAGATTTAATACCCTACCAGTTTAGTCGGCAACCAAATGTAGTAACAGATGTGCGCTAGATAAACCAAACAGTAACATACATAAGAAGAAAAGAGAGATATAGCTATTGCCAAGGAACATGTCATCAATTCTTTTGCAATTAGGCTTATGCACCAAGGTCACATGATATTGTTCCCAATGTTTTTCTCTCTTTATTACGATCTCTGTTTAGTTGGTCGAATTCAAAGCTCTCCTGTTTTTACAAGCTGATTAAGCCAAGGGATGACAGATAGGAGTTGGAATTGTTCAAATCAGTCAGGTACCTAGTATCGTTGGTAAGAAGAGGACATTCTGAATTGATACGAAACTAAAAGAGGAACAGTATTGGCTTATTTTTGCTTTTTTTTTTTTTTTAATCTTTTGTGCTATTGAAATCTCCATTTTGTTGATGAATGAAAGGCTTTCTCAATGTTTTTACTCTTATTTTCAGCTGTTTGCCTTCAGACTTGGAGGGAGCAGTTAGGCAATCTGGTGAATCTGCTGGCCTGTTTGTATCTTCAGGAGGATCGAGAGCAATAGTATGATACTATTTTACTTTATGCTAATCCTTAAGAAACCTTATGTCACTGCCCTGTAAATATGCGCAAACATTATAACAGAAAATGAAATTCTCAACACGTCCAAATTTCAGCCTGCAATTGCCAGGATAGTAAGGCGTAAATTTAGATTCTTACTATAAGAAGCACTCTAATTTTCCATGTTTCATGTACCTAATTTCACCTCTATACCTAGTAGTAGAAAATCGCCCAGTCTAAAAGCTGGTTGGATTTTGAAATGCTTTTATTGGCTCACTCTCTCCCAGTTTATATTCTTCTTTCTTTAACAGGGGTATCGAGGGCCCCATTGCCACTCTTTTGTGAAAAAACTGTTAGTATTCCTTCTCTGAAACCCAGTAAAATCCCAAACCAATAGAGAAACAGAGGCAGTATTCTGCTGTGATTCTATTGATGATAAATTCCCTATGAGTTCACAAAATATCCACAGAATACACTAAAAGAAAGCACAGTAAATTAAGAAAGAAAAGACAGAAATAAATGCCAAAGTTATTCTCCAGCTCCTTCGAGAAGGCTGGAATCTTCTCTTCAAAAGTCTCAGCAGCCTTTACCCAAAATATGACCTGATTTGCTAATCCCAAAACATTCCTTATATACCTCATCAGGGGTAGGTCCCCCCAAGAACCTCCCTTTGTAGGTGTAAATGATTGGAGGTCTAACAAAGATCTACTCAGTCGAAGGCTGGTTTTGAGAGATTTGATGACTTCCTTGATTCTTAGCGACCAAGTTTGAACTCAAATTAGATGTTTGGGTGCATCTTATGATTCCTCTTTATCCTTCAGTTTCTTGCTAATAAAGGTTTGATCCTGAACTTGTTTCTTTATCTCCCTCATCTCTATATTCTTGCATATATTCTTTTCAGGTTGAGCTTCTTATCCCCCAACTTCAGTTTCTGGATGATGAAGGTGCTCAGGCTGAACTCTGGGAGCTCTCAAGAGTTTTCTTGGAGTCACTCATGGAGGAAACAAATTGTGAGGTAAGTAGGATGTGGAAATATCACTTTAATGCCCTTTTTACAGTTTACTAATCAAGAATTGAATTTGAAGAACAGTTGGAATATATTATATATACCATGTGTTTCAGATTACTATTAATCTTATTTAGTGAAAATTTAAATTATATATGATGTGAAATCCACAACAGAAGTAAACAAAGAAAACTGGAAAAGATTCAAAATTTTTAGGATGTTTATTCACAAGTTAGTTTAATCATATATCTAAGTACACTCCAAATTTAATTGCTAGAAAGTTAAAGCTGTGTTTCCTGATGCTGGGGCTGCAGCACTTCTAGAATATCGATGGAAAGATGCCTCCTTCAAAATTTCCAGGTAAGTTCCATAAAACATACAATTCCTTTTCTGAAAAAACCTTGAAGATTCCATCACTAATACTGTTGATATCGATTGAAGGAAAACTTGAGACTAAGGCAAAATATATTGGTTACACATTGGATAGAATCTTTATCTATCATAATCTGTTCTAGCCACCATTTAAGTGAATGCATTACAATTTTCCAGATTAATTGTGTACTCTAAAAAGCTAAGCCAAAGTGAGTTTGGACAATCTGATTCTATATGTTCTTTTTTTTTACCTGAATACAATTATAACTTAATGACGTATGATTGTCATTCTCAGCTTAAGTGACCGAAAACCTGTAGATATTGCAGATGAGATAGTTGTTATGGTTGTTCCTGATTACCAAATGTTGGCAAATGTAGAGAAAATTGCAGCTGCCCTCTCAGATGATCCGGTAAAAATCCAATCATTCCATTTGGTGTTGAAATCTTTGCTTCCCAAATTTTTTCTCATATTATGGTACTCAACTGCGAAAATTGGAGGTCTGCAATCATATAATGAAGCCACATAAGTTCAAATTAATATGCATTAGGTTATCTTTTATTGAGTTAACATATACTAACATAATAAGAAAAGACTATTCTTTCTGACAGTGTCGTATATCATCAGATCATTTACATATATTTGGACTGTGACAGTTTTCACTTGTACACTGAATCAAATGGACTTGGTTCCTTCCTTCCTACTTATGTTTCTACGTTGATGGCAGCCAAGGCCTCTTATCATGTGGAACCCTCGTCTCATCAGCGAAGATGTAGGGGTTGGATTTAACGTTCGAAAATTGAGAAGATACTTTTTAAGGTAAATTTCAAAACTCTCACCTTATCTAGAATACATTTAATCTAGGTATGAGTAGACATCAGCATTAAGAAAAATAAAAGTAAAGGTTATCTTATTTGCGAAATAATTGCTTACGAAAAATGATCGTCTGTCTAATATGAAGTAAACGTCTAACCTCATACATAACAGTTGTAAAGGAGAAAAAAAGTTTCATGAGAGACTCTAAACTTTGTAATTGGTCATTAAGTTCAGGTAAGAAAGGATCTATGTTACTCAACCTCTATTTTGTTATTTTTTGTACAGCACGTTTACAACAGTCTACTCCATGAGGCCTTTGCCATCTGGAGCTGTCTTTAGAGCTTATCCTGGGTAAGAAGATTTTAACATCTTACAAGATTCTTTAAATCATCTTCTCACACTGTGCTGAAGTTGTTTATTTCTTTTATTTGACTGCTGAGCTCACTTTGGTCTGTTCAAGCCTCTAGAGAATGCTTACAGTTAATTTAGGAACAACTCAGATGGTCCAGACTACTTTTTAGTTATATGACCTGAACAAATTTAAGAATATAATCAAATACTATGCTGTATCTTACATGCAAGTAAGGGAATCATTGATCATTGAAGTGAAATAGTAATCGAACTCAAGGCCCAGGCCCAGGCCGCTAAATGCGCAAATACCTTTGGTTGAACTTTCTCCAGCCACTTTCTTCTTCCTCCTCTTTTTTTTTCAAAAAAAAAGGTGTGATTAACACCTTTGCAATCTTTGACCAGGTTATGGAAAGTGTTCTATGATGACAAAGATAGGCCTGGCAGATATTTGCTAGCCAAAGAATTAATAAGCCGTCCAGATGCTGGAGACCTCGAGGTCAGTTACCTGAGAAAATAACATATGAGAAATTAGAATAAGTTAATTGTGGAGCTTTCACAATTTTTCTACTAATAAAGCTACTAATCTGTCATCTACTTTACCTCACATTATATGATCAGAAGTAAATATATAGATTGTTTAAGTAACTTAATTGTGGAACTTTCACAATTTCAATCTTACAGTGGTTCTTAAATGAAGAAGAGATTAGTTAGATCTCTAATGTAAGTATGAGAATCTTGTGCAGATAATATTTGGAAATGTAGCAGATTCAGACCAGGACCCGTCATTTTTGGACAAAGCAGCTGGAGTTCTCTCTTCGTTAACCCGATTCATGAAGGCAATTTCAAAATGAGCAGCGCAAATTTTCCTTGATGTGTTTAAAAATAATAGGTCCTTGTATATTATGAACTCCAAACGCAATCTATTGTGTCTTTAATGAGCTACCTTAAATCTAATCATTAGTTCCAGAAACCAAAGAAGAGTCAACTTTCTTGATATATCTGTTCTTCCAATGTGTGAATTTTTTAGTTGAGTTCTTTTTAACCCCACCAC ATGGCTTCCTCATTCCCCAATCCTTCCTTCCCCCATTGTTCCTTCCTAATATCCAATTCAACCTCATCCACACATTTCCCCTTATCTTTTCCTCCAACTTCCCTCTCTGTCTTCCCTCAAATTTCATCTACCAAAAATGGGTCCGTTTCAAAAATTCATGGTAAGTTCGAGAAATTTCAAGGCGAGACTCCCCAAGACGATGTATTAGAAGCGAATCCGTCATTGTCGTTGCAACAACAGCTGAGTCAGGAGGTTGAAGAAGATGACAGCTGTTTGCCTTCAGACTTGGAGGGAGCAGTTAGGCAATCTGGTGAATCTGCTGGCCTGTTTGTATCTTCAGGAGGATCGAGAGCAATAGTTGAGCTTCTTATCCCCCAACTTCAGTTTCTGGATGATGAAGGTGCTCAGGCTGAACTCTGGGAGCTCTCAAGAGTTTTCTTGGAGTCACTCATGGAGGAAACAAATTGTGAGAAAGTTAAAGCTGTGTTTCCTGATGCTGGGGCTGCAGCACTTCTAGAATATCGATGGAAAGATGCCTCCTTCAAAATTTCCAGCTTAAGTGACCGAAAACCTGTAGATATTGCAGATGAGATAGTTGTTATGGTTGTTCCTGATTACCAAATGTTGGCAAATGTAGAGAAAATTGCAGCTGCCCTCTCAGATGATCCGCCAAGGCCTCTTATCATGTGGAACCCTCGTCTCATCAGCGAAGATGTAGGGGTTGGATTTAACGTTCGAAAATTGAGAAGATACTTTTTAAGCACGTTTACAACAGTCTACTCCATGAGGCCTTTGCCATCTGGAGCTGTCTTTAGAGCTTATCCTGGGTTATGGAAAGTGTTCTATGATGACAAAGATAGGCCTGGCAGATATTTGCTAGCCAAAGAATTAATAAGCCGTCCAGATGCTGGAGACCTCGAGATAATATTTGGAAATGTAGCAGATTCAGACCAGGACCCGTCATTTTTGGACAAAGCAGCTGGAGTTCTCTCTTCGTTAACCCGATTCATGAAGGCAATTTCAAAATGA ATGGCTTCCTCATTCCCCAATCCTTCCTTCCCCCATTGTTCCTTCCTAATATCCAATTCAACCTCATCCACACATTTCCCCTTATCTTTTCCTCCAACTTCCCTCTCTGTCTTCCCTCAAATTTCATCTACCAAAAATGGGTCCGTTTCAAAAATTCATGGTAAGTTCGAGAAATTTCAAGGCGAGACTCCCCAAGACGATGTATTAGAAGCGAATCCGTCATTGTCGTTGCAACAACAGCTGAGTCAGGAGGTTGAAGAAGATGACAGCTGTTTGCCTTCAGACTTGGAGGGAGCAGTTAGGCAATCTGGTGAATCTGCTGGCCTGTTTGTATCTTCAGGAGGATCGAGAGCAATAGTTGAGCTTCTTATCCCCCAACTTCAGTTTCTGGATGATGAAGGTGCTCAGGCTGAACTCTGGGAGCTCTCAAGAGTTTTCTTGGAGTCACTCATGGAGGAAACAAATTGTGAGAAAGTTAAAGCTGTGTTTCCTGATGCTGGGGCTGCAGCACTTCTAGAATATCGATGGAAAGATGCCTCCTTCAAAATTTCCAGCTTAAGTGACCGAAAACCTGTAGATATTGCAGATGAGATAGTTGTTATGGTTGTTCCTGATTACCAAATGTTGGCAAATGTAGAGAAAATTGCAGCTGCCCTCTCAGATGATCCGCCAAGGCCTCTTATCATGTGGAACCCTCGTCTCATCAGCGAAGATGTAGGGGTTGGATTTAACGTTCGAAAATTGAGAAGATACTTTTTAAGCACGTTTACAACAGTCTACTCCATGAGGCCTTTGCCATCTGGAGCTGTCTTTAGAGCTTATCCTGGGTTATGGAAAGTGTTCTATGATGACAAAGATAGGCCTGGCAGATATTTGCTAGCCAAAGAATTAATAAGCCGTCCAGATGCTGGAGACCTCGAGATAATATTTGGAAATGTAGCAGATTCAGACCAGGACCCGTCATTTTTGGACAAAGCAGCTGGAGTTCTCTCTTCGTTAACCCGATTCATGAAGGCAATTTCAAAATGA MASSFPNPSFPHCSFLISNSTSSTHFPLSFPPTSLSVFPQISSTKNGSVSKIHGKFEKFQGETPQDDVLEANPSLSLQQQLSQEVEEDDSCLPSDLEGAVRQSGESAGLFVSSGGSRAIVELLIPQLQFLDDEGAQAELWELSRVFLESLMEETNCEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVDIADEIVVMVVPDYQMLANVEKIAAALSDDPPRPLIMWNPRLISEDVGVGFNVRKLRRYFLSTFTTVYSMRPLPSGAVFRAYPGLWKVFYDDKDRPGRYLLAKELISRPDAGDLEIIFGNVADSDQDPSFLDKAAGVLSSLTRFMKAISK
BLAST of CsaV3_2G005300.1 vs. NCBI nr
Match: XP_004139177.1 (PREDICTED: uncharacterized protein LOC101209109 [Cucumis sativus] >KGN60911.1 hypothetical protein Csa_2G022800 [Cucumis sativus]) HSP 1 Score: 672.2 bits (1733), Expect = 9.6e-190 Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 0
BLAST of CsaV3_2G005300.1 vs. NCBI nr
Match: XP_008454557.1 (PREDICTED: uncharacterized protein LOC103494946 [Cucumis melo]) HSP 1 Score: 659.4 bits (1700), Expect = 6.4e-186 Identity = 333/342 (97.37%), Postives = 340/342 (99.42%), Query Frame = 0
BLAST of CsaV3_2G005300.1 vs. NCBI nr
Match: XP_022998962.1 (probable linoleate 9S-lipoxygenase 5 [Cucurbita maxima]) HSP 1 Score: 588.6 bits (1516), Expect = 1.4e-164 Identity = 308/348 (88.51%), Postives = 321/348 (92.24%), Query Frame = 0
BLAST of CsaV3_2G005300.1 vs. NCBI nr
Match: XP_023545377.1 (probable linoleate 9S-lipoxygenase 5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 583.2 bits (1502), Expect = 5.9e-163 Identity = 305/349 (87.39%), Postives = 318/349 (91.12%), Query Frame = 0
BLAST of CsaV3_2G005300.1 vs. NCBI nr
Match: XP_023546456.1 (probable linoleate 9S-lipoxygenase 5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 582.0 bits (1499), Expect = 1.3e-162 Identity = 305/348 (87.64%), Postives = 317/348 (91.09%), Query Frame = 0
BLAST of CsaV3_2G005300.1 vs. TAIR10
Match: AT5G27560.1 (Domain of unknown function (DUF1995)) HSP 1 Score: 418.7 bits (1075), Expect = 3.5e-117 Identity = 213/299 (71.24%), Postives = 248/299 (82.94%), Query Frame = 0
BLAST of CsaV3_2G005300.1 vs. TrEMBL
Match: tr|A0A0A0LLR1|A0A0A0LLR1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G022800 PE=4 SV=1) HSP 1 Score: 672.2 bits (1733), Expect = 6.3e-190 Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 0
BLAST of CsaV3_2G005300.1 vs. TrEMBL
Match: tr|A0A1S3BZN3|A0A1S3BZN3_CUCME (uncharacterized protein LOC103494946 OS=Cucumis melo OX=3656 GN=LOC103494946 PE=4 SV=1) HSP 1 Score: 659.4 bits (1700), Expect = 4.3e-186 Identity = 333/342 (97.37%), Postives = 340/342 (99.42%), Query Frame = 0
BLAST of CsaV3_2G005300.1 vs. TrEMBL
Match: tr|A0A2P4NAY7|A0A2P4NAY7_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_37669 PE=4 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 1.6e-129 Identity = 249/350 (71.14%), Postives = 288/350 (82.29%), Query Frame = 0
BLAST of CsaV3_2G005300.1 vs. TrEMBL
Match: tr|A0A2P4ILW1|A0A2P4ILW1_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_58995 PE=4 SV=1) HSP 1 Score: 469.2 bits (1206), Expect = 8.2e-129 Identity = 248/350 (70.86%), Postives = 287/350 (82.00%), Query Frame = 0
BLAST of CsaV3_2G005300.1 vs. TrEMBL
Match: tr|B9RF60|B9RF60_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1431490 PE=4 SV=1) HSP 1 Score: 461.8 bits (1187), Expect = 1.3e-126 Identity = 247/346 (71.39%), Postives = 282/346 (81.50%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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