CsaV3_2G005170.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCAACTTAAGATGTCGGTATCTTGATGTTTTGGTATCTTACATCCCTACGAATCAAATGGGAGAATCTAAATGCTGAAAATCTATCTTAACTACCAGGAAACAATCTTACATCCCTACAAATCAAATGGGAGAATCCAATTGCTGAAATCTATCTTAGACTACCAGGAAGCAAAATAACTTGTTGAAGGTAACTTATATGAAAATAATAATAATAATAATAATAAATAAAATTTGAAAACAGGACCAAAATGATGCTTCTAGCTAATTGTTAGCCCCCATAATTTTTAGATTGTTTGTAGCCCTCATATATATATTTGGTTCCCTGGCCTCTGTCCCTTGTTTTTAGCAAATTGTCAGCTGCCATAATTTTTAGGTTCTTAGCACCCCACCCAGTACATATTTGGTTACGAGACCACTATTCCTTGTTCTCTTCCACGATGGGAAGCCACTTGGGGCTGCTTGGGTTGTAATGGGATGGGCTCTTAATGTAGAGCTATTAAGGGGTGTTCGGTCATCCGAGATGGATGAGTTTACAATAGTAATATAATACGCTGTTAATATAATGTAATCTAAAACTCATGATGTTTGAAGTTTTTTAGATTAGGTAATCCAGCCTCCTATTATACCGTTTTCAATCTGGCCTTTTTTTCGACTGTTTTCATGCATTGCGATATCCCATATTTTTTTTGTCTTCGATCACTCGTCCTTTTCAACAATTCAGAGATTACATCCAAATTCTCCAAATAACCCCCAAGCATTTTTAGTGTTTTAGAGTTTTGGGCGAGCTCAAGTTCGTTCCACCCTCAATTACTTTCTCATTCCAACGCCTCTTAGGTTCTCTGAGAATCTTCTTCAAACTTCACGACCCCATTTTCCTTGTGAGTCATTGATTACCAATTCCATTTTCGTTATGAGTCCTTGGTTACTCACCCATTCCAACACCGCTAGAAAATTCTCTTAGGAATCTTCCACCGTTTTTAACCCAAATTTTCAGGCTTCTCGATCTCTCTCATTCACGCCGAACCAATACCTCTTAGATATTTTTCTCTGAGTCTCATAAATCCTAGTCACATTTCCGACTCCAAAACAGTGGAATCATGAATCTCATAATTGATAGTTCAATACACTCCCACATAAAATAAGACACAGCTAGAAAGTGGATTTGAATTTCCATCTAGTTTTTTGTATTCGTGGAGCAATATTGATTATTTTAAGTGTAGAGAATTTGAGTAAATTTTGTTACCATTCACCTGATTGCAGATGAAGAGGACAATCTTCTCCAAGGCCTAAACAGCTACCGACAAGCACAAAACCTCCCGCCGCTCGTGAAGAACGCAAAAGCCGACTGCGTTGCAAACGAGATGGCCGACGATGCTGAAGACCAACCCTGTGCTGTCACCACCACCAAATCAAACGTCGTTGCAAGCCGACCGTCACAAATCACGAAGTTCCCGGATTACGCCGAGAAATGCAAGGTAGATATCAACACCACCGCTGACGCCGTGGTGATGCCGGTGTGCGTACCAAAACTAGTCCAAACTCTGCTGCTTACGAACTACACCCACTCCCAGTACGCGAAGTATTTGAACGATTCAAGATTCGTCGGTGCGGGGCTAGGGAAGGAAGACGACTGGATGGTGGTGGTTCTGACGACCGGAACGAACGCGGGTAGCTTCGAAGGTTCGGGGGCCGGGCCGGCGTTGGGTTCGATTTGGGTATGGGCAGTGGCGGTTTTGGTAGGGCTTTTGATTGGGGATTATGTGAGATTCTAA ATGAGCAACTTAAGATGTCGGTATCTTGATGTTTTGGTTCTTAGCACCCCACCCAGTACATATTTGGTTACGAGACCACTATTCCTTGTTCTCTTCCACGATGGGAAGCCACTTGGGGCTGCTTGGGTTGTAATGGGATGGGCTCTTAATGTAGAGCTATTAAGGGGTGTTCGGTCATCCGAGATGGATGAGTTTACAATAAGTTTTGGGCGAGCTCAAGTTCGTTCCACCCTCAATTACTTTCTCATTCCAACGCCTCTTAGGTTCTCTGAGAATCTTCTTCAAACTTCACGACCCCATTTTCCTTATGAAGAGGACAATCTTCTCCAAGGCCTAAACAGCTACCGACAAGCACAAAACCTCCCGCCGCTCGTGAAGAACGCAAAAGCCGACTGCGTTGCAAACGAGATGGCCGACGATGCTGAAGACCAACCCTGTGCTGTCACCACCACCAAATCAAACGTCGTTGCAAGCCGACCGTCACAAATCACGAAGTTCCCGGATTACGCCGAGAAATGCAAGGTAGATATCAACACCACCGCTGACGCCGTGGTGATGCCGGTGTGCGTACCAAAACTAGTCCAAACTCTGCTGCTTACGAACTACACCCACTCCCAGTACGCGAAGTATTTGAACGATTCAAGATTCGTCGGTGCGGGGCTAGGGAAGGAAGACGACTGGATGGTGGTGGTTCTGACGACCGGAACGAACGCGGGTAGCTTCGAAGGTTCGGGGGCCGGGCCGGCGTTGGGTTCGATTTGGGTATGGGCAGTGGCGGTTTTGGTAGGGCTTTTGATTGGGGATTATGTGAGATTCTAA ATGAGCAACTTAAGATGTCGGTATCTTGATGTTTTGGTTCTTAGCACCCCACCCAGTACATATTTGGTTACGAGACCACTATTCCTTGTTCTCTTCCACGATGGGAAGCCACTTGGGGCTGCTTGGGTTGTAATGGGATGGGCTCTTAATGTAGAGCTATTAAGGGGTGTTCGGTCATCCGAGATGGATGAGTTTACAATAAGTTTTGGGCGAGCTCAAGTTCGTTCCACCCTCAATTACTTTCTCATTCCAACGCCTCTTAGGTTCTCTGAGAATCTTCTTCAAACTTCACGACCCCATTTTCCTTATGAAGAGGACAATCTTCTCCAAGGCCTAAACAGCTACCGACAAGCACAAAACCTCCCGCCGCTCGTGAAGAACGCAAAAGCCGACTGCGTTGCAAACGAGATGGCCGACGATGCTGAAGACCAACCCTGTGCTGTCACCACCACCAAATCAAACGTCGTTGCAAGCCGACCGTCACAAATCACGAAGTTCCCGGATTACGCCGAGAAATGCAAGGTAGATATCAACACCACCGCTGACGCCGTGGTGATGCCGGTGTGCGTACCAAAACTAGTCCAAACTCTGCTGCTTACGAACTACACCCACTCCCAGTACGCGAAGTATTTGAACGATTCAAGATTCGTCGGTGCGGGGCTAGGGAAGGAAGACGACTGGATGGTGGTGGTTCTGACGACCGGAACGAACGCGGGTAGCTTCGAAGGTTCGGGGGCCGGGCCGGCGTTGGGTTCGATTTGGGTATGGGCAGTGGCGGTTTTGGTAGGGCTTTTGATTGGGGATTATGTGAGATTCTAA MSNLRCRYLDVLVLSTPPSTYLVTRPLFLVLFHDGKPLGAAWVVMGWALNVELLRGVRSSEMDEFTISFGRAQVRSTLNYFLIPTPLRFSENLLQTSRPHFPYEEDNLLQGLNSYRQAQNLPPLVKNAKADCVANEMADDAEDQPCAVTTTKSNVVASRPSQITKFPDYAEKCKVDINTTADAVVMPVCVPKLVQTLLLTNYTHSQYAKYLNDSRFVGAGLGKEDDWMVVVLTTGTNAGSFEGSGAGPALGSIWVWAVAVLVGLLIGDYVRF
BLAST of CsaV3_2G005170.1 vs. NCBI nr
Match: KGN60896.1 (hypothetical protein Csa_2G021670 [Cucumis sativus]) HSP 1 Score: 340.1 bits (871), Expect = 6.9e-90 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. NCBI nr
Match: XP_011648805.1 (PREDICTED: uncharacterized GPI-anchored protein At3g06035-like [Cucumis sativus]) HSP 1 Score: 340.1 bits (871), Expect = 6.9e-90 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. NCBI nr
Match: XP_008454814.1 (PREDICTED: uncharacterized GPI-anchored protein At3g06035 [Cucumis melo] >ABR67421.1 GPI-anchored protein-like protein II [Cucumis melo subsp. melo]) HSP 1 Score: 311.2 bits (796), Expect = 3.4e-81 Identity = 156/169 (92.31%), Postives = 157/169 (92.90%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. NCBI nr
Match: XP_022999135.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima]) HSP 1 Score: 278.5 bits (711), Expect = 2.5e-71 Identity = 135/168 (80.36%), Postives = 147/168 (87.50%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. NCBI nr
Match: XP_022946761.1 (uncharacterized GPI-anchored protein At3g06035 [Cucurbita moschata] >XP_023545378.1 uncharacterized GPI-anchored protein At3g06035 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 275.8 bits (704), Expect = 1.6e-70 Identity = 134/168 (79.76%), Postives = 146/168 (86.90%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. TAIR10
Match: AT1G54860.1 (Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 181.8 bits (460), Expect = 5.7e-46 Identity = 94/169 (55.62%), Postives = 114/169 (67.46%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. TAIR10
Match: AT3G06035.1 (Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 141.4 bits (355), Expect = 8.5e-34 Identity = 73/169 (43.20%), Postives = 105/169 (62.13%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. TAIR10
Match: AT5G19250.1 (Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 134.8 bits (338), Expect = 8.0e-32 Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. TAIR10
Match: AT5G19240.1 (Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 107.5 bits (267), Expect = 1.4e-23 Identity = 59/144 (40.97%), Postives = 87/144 (60.42%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. TAIR10
Match: AT5G19230.1 (Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 89.7 bits (221), Expect = 2.9e-18 Identity = 51/138 (36.96%), Postives = 73/138 (52.90%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. Swiss-Prot
Match: sp|Q84MC0|UGPI4_ARATH (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.5e-32 Identity = 73/169 (43.20%), Postives = 105/169 (62.13%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. Swiss-Prot
Match: sp|P59833|UGPI3_ARATH (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 GN=At5g19250 PE=2 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.4e-30 Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. Swiss-Prot
Match: sp|Q84VZ5|UGPI2_ARATH (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 GN=At5g19240 PE=2 SV=2) HSP 1 Score: 107.5 bits (267), Expect = 2.5e-22 Identity = 59/144 (40.97%), Postives = 87/144 (60.42%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. Swiss-Prot
Match: sp|Q8GUL8|UGPI1_ARATH (Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 GN=At5g19230 PE=2 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 5.3e-17 Identity = 51/138 (36.96%), Postives = 73/138 (52.90%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. TrEMBL
Match: tr|A0A0A0LLP1|A0A0A0LLP1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021670 PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 4.6e-90 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. TrEMBL
Match: tr|A0A1S3C074|A0A1S3C074_CUCME (uncharacterized GPI-anchored protein At3g06035 OS=Cucumis melo OX=3656 GN=LOC103495124 PE=4 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 2.3e-81 Identity = 156/169 (92.31%), Postives = 157/169 (92.90%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. TrEMBL
Match: tr|A6YTC7|A6YTC7_CUCME (GPI-anchored protein-like protein II OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 2.3e-81 Identity = 156/169 (92.31%), Postives = 157/169 (92.90%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. TrEMBL
Match: tr|W9S359|W9S359_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002452 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.8e-46 Identity = 96/166 (57.83%), Postives = 123/166 (74.10%), Query Frame = 0
BLAST of CsaV3_2G005170.1 vs. TrEMBL
Match: tr|A0A2R6RBI5|A0A2R6RBI5_ACTCH (Putative GPI-anchored protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc09482 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 2.4e-46 Identity = 101/178 (56.74%), Postives = 126/178 (70.79%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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