CsaV3_2G005150.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G005150.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	GPI-anchored protein-like protein
Location	chr2 : 2805769 .. 2806717 (+)
Sequence length	588

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCCTCAGCCTTTGTGCTCTTCTACACTGTTTGCTTCCTCTGTTACATTCGGTACACTGTGATGGTTAGCTCTCGCTCTCTCGCTCTCTCTCTCTCTCTCTCTAAGTTTATAAAGCTCATTAACTGCACAGAAAACAACACATTCTTACCCTAGATGATTCATGCAAACAGAACTTGAAATTCTCCAACTAGTTTTATGAGGTTGCACAAAAATATTTTTCTTTACAAACCCTTTTCTCAACATTTTCAAACTAAGATTTTTCAGTCACCTTTCCTGGCACGTTTATCAAAGAAATGCATGGTATGATAAAGTCAGTCGAACTTACAGCTCTTTAGTGAAAGATGAATGGCTGGCATTCTTTTCATATCTTCGTACACTGATGAATTAAACTTCAAACCTGACTACCTGCAGTTGATTTAGAAGAGCTTTTTAAAGGCTTTAACATCTACAGAAACTCAAAAGACAGGTCGGCTCTCGCCCAGAACTCCAAAGCAAAGTGTATAGCAGAACAAATTGCGAAGAACTGGTATAATAAATTGCCTTGCAGTGCTGCCATTGAGGGCGACGTCCTTTTGCCATTCAACCAGAGCCAACTTCCTATGTCACACTACTCAAGAAAGTGCGAAGTTAACCTCAATCATACAGTAGATGGGGTTATTTTACCAGTATACGTCCCTAACTCAGCAGATAAACTTATGCTTACTAATTGCACTCATTCTCAGGCTCCGAAGTATTTGGATAATGCAACTTACACAAGGGTAGGTCTTGCTACAAATGAAGACTGTTTAGTGATTGCTTTGGGTACAGATGCCATTAGTGGAAGCTATTCCGCTGGTCTATCTTTGGTTCCACATATTGGTTGGGTTTATTGGCTGGGATTTTTGTTTTTATCAATTCTTTGTTTTGGTGAAGGTGAAAAGCTTTTGTGTTCTTTCATTCTTTAA

mRNA sequence

ATGTTGCCTCAGCCTTTGTGCTCTTCTACACTGTTTGCTTCCTCTGTTACATTCGTTGATTTAGAAGAGCTTTTTAAAGGCTTTAACATCTACAGAAACTCAAAAGACAGGTCGGCTCTCGCCCAGAACTCCAAAGCAAAGTGTATAGCAGAACAAATTGCGAAGAACTGGTATAATAAATTGCCTTGCAGTGCTGCCATTGAGGGCGACGTCCTTTTGCCATTCAACCAGAGCCAACTTCCTATGTCACACTACTCAAGAAAGTGCGAAGTTAACCTCAATCATACAGTAGATGGGGTTATTTTACCAGTATACGTCCCTAACTCAGCAGATAAACTTATGCTTACTAATTGCACTCATTCTCAGGCTCCGAAGTATTTGGATAATGCAACTTACACAAGGGTAGGTCTTGCTACAAATGAAGACTGTTTAGTGATTGCTTTGGGTACAGATGCCATTAGTGGAAGCTATTCCGCTGGTCTATCTTTGGTTCCACATATTGGTTGGGTTTATTGGCTGGGATTTTTGTTTTTATCAATTCTTTGTTTTGGTGAAGGTGAAAAGCTTTTGTGTTCTTTCATTCTTTAA

Coding sequence (CDS)

ATGTTGCCTCAGCCTTTGTGCTCTTCTACACTGTTTGCTTCCTCTGTTACATTCGTTGATTTAGAAGAGCTTTTTAAAGGCTTTAACATCTACAGAAACTCAAAAGACAGGTCGGCTCTCGCCCAGAACTCCAAAGCAAAGTGTATAGCAGAACAAATTGCGAAGAACTGGTATAATAAATTGCCTTGCAGTGCTGCCATTGAGGGCGACGTCCTTTTGCCATTCAACCAGAGCCAACTTCCTATGTCACACTACTCAAGAAAGTGCGAAGTTAACCTCAATCATACAGTAGATGGGGTTATTTTACCAGTATACGTCCCTAACTCAGCAGATAAACTTATGCTTACTAATTGCACTCATTCTCAGGCTCCGAAGTATTTGGATAATGCAACTTACACAAGGGTAGGTCTTGCTACAAATGAAGACTGTTTAGTGATTGCTTTGGGTACAGATGCCATTAGTGGAAGCTATTCCGCTGGTCTATCTTTGGTTCCACATATTGGTTGGGTTTATTGGCTGGGATTTTTGTTTTTATCAATTCTTTGTTTTGGTGAAGGTGAAAAGCTTTTGTGTTCTTTCATTCTTTAA

Protein sequence

MLPQPLCSSTLFASSVTFVDLEELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAAIEGDVLLPFNQSQLPMSHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKYLDNATYTRVGLATNEDCLVIALGTDAISGSYSAGLSLVPHIGWVYWLGFLFLSILCFGEGEKLLCSFIL

Homology

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BLAST of CsaV3_2G005150.1 vs. NCBI nr
Match: KGN60893.1 (hypothetical protein Csa_2G021640 [Cucumis sativus])

HSP 1 Score: 365.5 bits (937), Expect = 1.1e-97
Identity = 180/189 (95.24%), Postives = 180/189 (95.24%), Query Frame = 0


Query: 7   CSSTLFASSVTFVDLEELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAA 66
           C   L  S    VDLEELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAA
Sbjct: 16  CLLPLLHSVHCDVDLEELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAA 75

Query: 67  IEGDVLLPFNQSQLPMSHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKY 126
           IEGDVLLPFNQSQLPMSHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKY
Sbjct: 76  IEGDVLLPFNQSQLPMSHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKY 135

Query: 127 LDNATYTRVGLATNEDCLVIALGTDAISGSYSAGLSLVPHIGWVYWLGFLFLSILCFGEG 186
           LDNATYTRVGLATNEDCLVIALGTDAISGSYSAGLSLVPHIGWVYWLGFLFLSILCFGEG
Sbjct: 136 LDNATYTRVGLATNEDCLVIALGTDAISGSYSAGLSLVPHIGWVYWLGFLFLSILCFGEG 195

Query: 187 EKLLCSFIL 196
           EKLLCSFIL
Sbjct: 196 EKLLCSFIL 204

[Close]

BLAST of CsaV3_2G005150.1 vs. NCBI nr
Match: XP_008454795.1 (PREDICTED: uncharacterized GPI-anchored protein At3g06035-like isoform X1 [Cucumis melo])

HSP 1 Score: 329.7 bits (844), Expect = 6.7e-87
Identity = 163/175 (93.14%), Postives = 168/175 (96.00%), Query Frame = 0


Query: 22  EELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAAIEGDVLLPFNQSQLP 81
           EELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWY++LPCSAAIEGDVLLP NQSQLP
Sbjct: 31  EELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYSQLPCSAAIEGDVLLPSNQSQLP 90

Query: 82  M-SHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKYLDNATYTRVGLATN 141
           + + YSRKCEVNLNHTVDGVILPV+VPNSADKLMLTNCTHSQAPKYLDNATYT VGLATN
Sbjct: 91  LFTEYSRKCEVNLNHTVDGVILPVHVPNSADKLMLTNCTHSQAPKYLDNATYTSVGLATN 150

Query: 142 EDCLVIALGTDAISGSYSAGLSLVPHIGWVYWLGFLFLSILCFGEGEKLLCSFIL 196
           EDCLVIALGTDAISGSYSAGLSLVPH  WVYWLGFLFLSILCFGEGEKLL SFIL
Sbjct: 151 EDCLVIALGTDAISGSYSAGLSLVPHTCWVYWLGFLFLSILCFGEGEKLLFSFIL 205

[Close]

BLAST of CsaV3_2G005150.1 vs. NCBI nr
Match: ABR67420.1 (GPI-anchored protein-like protein [Cucumis melo subsp. melo])

HSP 1 Score: 281.2 bits (718), Expect = 2.7e-72
Identity = 138/151 (91.39%), Postives = 144/151 (95.36%), Query Frame = 0


Query: 22  EELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAAIEGDVLLPFNQSQLP 81
           EELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWY++LPCSAAIEGDVLLP NQSQLP
Sbjct: 31  EELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYSQLPCSAAIEGDVLLPSNQSQLP 90

Query: 82  M-SHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKYLDNATYTRVGLATN 141
           + + YSRKCEVNLNHTVDGVILPV+VPNSADKLMLTNCTHSQAPKYLDNATYT VGLATN
Sbjct: 91  LFTEYSRKCEVNLNHTVDGVILPVHVPNSADKLMLTNCTHSQAPKYLDNATYTSVGLATN 150

Query: 142 EDCLVIALGTDAISGSYSAGLSLVPHIGWVY 172
           EDCLVIALGTDAISGSYSAGLSLVPH  W +
Sbjct: 151 EDCLVIALGTDAISGSYSAGLSLVPHTCWPF 181

[Close]

BLAST of CsaV3_2G005150.1 vs. NCBI nr
Match: XP_022965956.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima] >XP_022965957.1 uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima])

HSP 1 Score: 233.4 bits (594), Expect = 6.5e-58
Identity = 114/164 (69.51%), Postives = 134/164 (81.71%), Query Frame = 0


Query: 19  VDLEELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAAIEGDVLLPFNQS 78
           VDLEELFKGFNIY+NS+ +  L +NSKA+CIAEQIAK  YN+LPCS  I GD LLP NQS
Sbjct: 28  VDLEELFKGFNIYKNSQSQLYLNKNSKAQCIAEQIAKKLYNQLPCSRTINGDALLPSNQS 87

Query: 79  QLPM-SHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKYLDNATYTRVGL 138
           QLP+ +HYS KC+VNLNHT+D VILP+YVPNS D L+L  C HSQA KYL NATYTRVGL
Sbjct: 88  QLPLFTHYSSKCQVNLNHTLDAVILPIYVPNSEDGLVLAGCKHSQASKYLGNATYTRVGL 147

Query: 139 ATNEDCLVIALGTDAISGSYSAGLSLVPHIGWVYWLGFLFLSIL 182
           A N+DCLVIALGTDA+ GSYSAG+S + +IG VY LGF+   ++
Sbjct: 148 AKNKDCLVIALGTDALGGSYSAGVSQIQNIGRVYCLGFIVFGVI 191

[Close]

BLAST of CsaV3_2G005150.1 vs. NCBI nr
Match: XP_022938135.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita moschata] >XP_023537309.1 uncharacterized GPI-anchored protein At3g06035-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.0 bits (593), Expect = 8.5e-58
Identity = 113/164 (68.90%), Postives = 135/164 (82.32%), Query Frame = 0


Query: 19  VDLEELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAAIEGDVLLPFNQS 78
           VDLEELFKGFNIY+NS+ +  L +NSKA+CIAEQIAK  YN+LPCS  I+GD LLP NQS
Sbjct: 28  VDLEELFKGFNIYKNSQSQLYLNKNSKAQCIAEQIAKKLYNQLPCSRTIDGDALLPSNQS 87

Query: 79  QLPM-SHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKYLDNATYTRVGL 138
           QLP+ +HYSRKC+VNLNHT+D VILP+YVPNS  +L+L  C HSQA KYL N TYTRVGL
Sbjct: 88  QLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSQASKYLGNTTYTRVGL 147

Query: 139 ATNEDCLVIALGTDAISGSYSAGLSLVPHIGWVYWLGFLFLSIL 182
           A N+DCLVIALGTDA+ GSYSAG+S + +IG VY LGF+   ++
Sbjct: 148 AKNKDCLVIALGTDALGGSYSAGVSRIQNIGRVYCLGFIVFGVI 191

[Close]

BLAST of CsaV3_2G005150.1 vs. TAIR10
Match: AT3G06035.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 84.7 bits (208), Expect = 6.8e-17
Identity = 55/170 (32.35%), Postives = 88/170 (51.76%), Query Frame = 0


Query: 24  LFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAAIEGDVLLPFNQSQLPMS 83
           L  G N YR +++ + L++N  A+C+A++IA  + NK PC+    G   +P  + Q   +
Sbjct: 32  LLTGINSYRTTQNLTILSKNENAECLADEIADQFKNK-PCTND-TGSATVPGTEPQ--FA 91

Query: 84  HYSR---KCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKYLDNATYTRVGLATN 143
           +Y +   KC +N++ T DG I+P  VP     L+LTN T SQ    L+++ +T +G+   
Sbjct: 92  NYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQYSMSLNDSKFTGIGIGKE 151

Query: 144 EDCLVIALGTDAISGSYSAGLSLVPH-------IGWVYWLGFLFLSILCF 184
           +D +V+ L T+   GSYS               IG V +L     S  CF
Sbjct: 152 DDWIVVVLTTNTPEGSYSTATPTKQESNGFTFGIGLVSYLVIFMYSSFCF 197

[Close]

BLAST of CsaV3_2G005150.1 vs. TAIR10
Match: AT5G19250.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-16
Identity = 49/136 (36.03%), Postives = 75/136 (55.15%), Query Frame = 0


Query: 24  LFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAAIEGDVLLPFNQSQLP-M 83
           L  G N YR S + + L  N  A+C+A++IA  + N+ PC+    G   +P      P +
Sbjct: 33  LLTGINSYRASLNLTTLIHNHNAECLADEIADQFKNQ-PCTNT-TGSASVPGTTPGFPNL 92

Query: 84  SHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKYLDNATYTRVGLATNED 143
            +   KC +N   T DG ILP  VPN    L+LTN T SQ  K L+++ +T +G+ ++++
Sbjct: 93  PNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTNFTMSQYSKDLNDSKFTGIGIGSDDN 152

Query: 144 CLVIALGTDAISGSYS 159
            +V+ L T    GSYS
Sbjct: 153 WIVVVLTTSTPEGSYS 166

[Close]

BLAST of CsaV3_2G005150.1 vs. TAIR10
Match: AT1G54860.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 81.6 bits (200), Expect = 5.7e-16
Identity = 45/146 (30.82%), Postives = 82/146 (56.16%), Query Frame = 0


Query: 22  EELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAAIEGDVLLPFNQSQLP 81
           + L +G N YR ++     A+N KA C+A++IA    ++ PC+       + P     +P
Sbjct: 33  DNLLQGLNSYRTAQRVPPFAKNEKADCVADEIADKLEDQ-PCTNHTTASTVTP---GSVP 92

Query: 82  --MSHYS---RKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKYLDNATYTRVG 141
             +++Y     +C+++ N T DG+ILPV +PN    L LTN T +   +YL+++ Y   G
Sbjct: 93  PRLTNYQDILSECKIDPNTTRDGLILPVCIPNRIPTLALTNYTQTGYARYLNDSRYVGAG 152

Query: 142 LATNEDCLVIALGTDAISGSYSAGLS 163
           + + ++ +V+ L T    GS++AG++
Sbjct: 153 VGSEKEWMVVVLTTSTPGGSFTAGVA 174

[Close]

BLAST of CsaV3_2G005150.1 vs. Swiss-Prot
Match: sp|Q84MC0|UGPI4_ARATH (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15
Identity = 55/170 (32.35%), Postives = 88/170 (51.76%), Query Frame = 0


Query: 24  LFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAAIEGDVLLPFNQSQLPMS 83
           L  G N YR +++ + L++N  A+C+A++IA  + NK PC+    G   +P  + Q   +
Sbjct: 32  LLTGINSYRTTQNLTILSKNENAECLADEIADQFKNK-PCTND-TGSATVPGTEPQ--FA 91

Query: 84  HYSR---KCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKYLDNATYTRVGLATN 143
           +Y +   KC +N++ T DG I+P  VP     L+LTN T SQ    L+++ +T +G+   
Sbjct: 92  NYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQYSMSLNDSKFTGIGIGKE 151

Query: 144 EDCLVIALGTDAISGSYSAGLSLVPH-------IGWVYWLGFLFLSILCF 184
           +D +V+ L T+   GSYS               IG V +L     S  CF
Sbjct: 152 DDWIVVVLTTNTPEGSYSTATPTKQESNGFTFGIGLVSYLVIFMYSSFCF 197

[Close]

BLAST of CsaV3_2G005150.1 vs. Swiss-Prot
Match: sp|P59833|UGPI3_ARATH (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 GN=At5g19250 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.6e-15
Identity = 49/136 (36.03%), Postives = 75/136 (55.15%), Query Frame = 0


Query: 24  LFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAAIEGDVLLPFNQSQLP-M 83
           L  G N YR S + + L  N  A+C+A++IA  + N+ PC+    G   +P      P +
Sbjct: 33  LLTGINSYRASLNLTTLIHNHNAECLADEIADQFKNQ-PCTNT-TGSASVPGTTPGFPNL 92

Query: 84  SHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKYLDNATYTRVGLATNED 143
            +   KC +N   T DG ILP  VPN    L+LTN T SQ  K L+++ +T +G+ ++++
Sbjct: 93  PNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTNFTMSQYSKDLNDSKFTGIGIGSDDN 152

Query: 144 CLVIALGTDAISGSYS 159
            +V+ L T    GSYS
Sbjct: 153 WIVVVLTTSTPEGSYS 166

[Close]

BLAST of CsaV3_2G005150.1 vs. TrEMBL
Match: tr|A0A0A0LGC0|A0A0A0LGC0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021640 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 7.3e-98
Identity = 180/189 (95.24%), Postives = 180/189 (95.24%), Query Frame = 0


Query: 7   CSSTLFASSVTFVDLEELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAA 66
           C   L  S    VDLEELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAA
Sbjct: 16  CLLPLLHSVHCDVDLEELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAA 75

Query: 67  IEGDVLLPFNQSQLPMSHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKY 126
           IEGDVLLPFNQSQLPMSHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKY
Sbjct: 76  IEGDVLLPFNQSQLPMSHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKY 135

Query: 127 LDNATYTRVGLATNEDCLVIALGTDAISGSYSAGLSLVPHIGWVYWLGFLFLSILCFGEG 186
           LDNATYTRVGLATNEDCLVIALGTDAISGSYSAGLSLVPHIGWVYWLGFLFLSILCFGEG
Sbjct: 136 LDNATYTRVGLATNEDCLVIALGTDAISGSYSAGLSLVPHIGWVYWLGFLFLSILCFGEG 195

Query: 187 EKLLCSFIL 196
           EKLLCSFIL
Sbjct: 196 EKLLCSFIL 204

[Close]

BLAST of CsaV3_2G005150.1 vs. TrEMBL
Match: tr|A0A1S3BZI4|A0A1S3BZI4_CUCME (uncharacterized GPI-anchored protein At3g06035-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495110 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 4.4e-87
Identity = 163/175 (93.14%), Postives = 168/175 (96.00%), Query Frame = 0


Query: 22  EELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAAIEGDVLLPFNQSQLP 81
           EELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWY++LPCSAAIEGDVLLP NQSQLP
Sbjct: 31  EELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYSQLPCSAAIEGDVLLPSNQSQLP 90

Query: 82  M-SHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKYLDNATYTRVGLATN 141
           + + YSRKCEVNLNHTVDGVILPV+VPNSADKLMLTNCTHSQAPKYLDNATYT VGLATN
Sbjct: 91  LFTEYSRKCEVNLNHTVDGVILPVHVPNSADKLMLTNCTHSQAPKYLDNATYTSVGLATN 150

Query: 142 EDCLVIALGTDAISGSYSAGLSLVPHIGWVYWLGFLFLSILCFGEGEKLLCSFIL 196
           EDCLVIALGTDAISGSYSAGLSLVPH  WVYWLGFLFLSILCFGEGEKLL SFIL
Sbjct: 151 EDCLVIALGTDAISGSYSAGLSLVPHTCWVYWLGFLFLSILCFGEGEKLLFSFIL 205

[Close]

BLAST of CsaV3_2G005150.1 vs. TrEMBL
Match: tr|A6YTC6|A6YTC6_CUCME (GPI-anchored protein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.8e-72
Identity = 138/151 (91.39%), Postives = 144/151 (95.36%), Query Frame = 0


Query: 22  EELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAAIEGDVLLPFNQSQLP 81
           EELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWY++LPCSAAIEGDVLLP NQSQLP
Sbjct: 31  EELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYSQLPCSAAIEGDVLLPSNQSQLP 90

Query: 82  M-SHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKYLDNATYTRVGLATN 141
           + + YSRKCEVNLNHTVDGVILPV+VPNSADKLMLTNCTHSQAPKYLDNATYT VGLATN
Sbjct: 91  LFTEYSRKCEVNLNHTVDGVILPVHVPNSADKLMLTNCTHSQAPKYLDNATYTSVGLATN 150

Query: 142 EDCLVIALGTDAISGSYSAGLSLVPHIGWVY 172
           EDCLVIALGTDAISGSYSAGLSLVPH  W +
Sbjct: 151 EDCLVIALGTDAISGSYSAGLSLVPHTCWPF 181

[Close]

BLAST of CsaV3_2G005150.1 vs. TrEMBL
Match: tr|A0A2N9EV37|A0A2N9EV37_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6535 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 7.7e-23
Identity = 61/163 (37.42%), Postives = 102/163 (62.58%), Query Frame = 0


Query: 20  DLEELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAAIEGDVLLPFNQSQ 79
           D + L +G N YRNS    AL +N KA C+AE+IA     + PC+++  G  ++  + +Q
Sbjct: 5   DEDNLLQGINSYRNSLKLPALFKNGKADCLAEEIADE-LEEEPCTSSTNGANIVSSSTTQ 64

Query: 80  L-PMSHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKYLDNATYTRVGLA 139
           L  +  + +KC++++N TVDG+I+P+ VP     L+LTN TH+   +YL+++ YT VG+ 
Sbjct: 65  LTDLLKHLKKCKIDVNTTVDGIIMPICVPKLVPTLVLTNYTHTSYARYLNSSKYTGVGVG 124

Query: 140 TNEDCLVIALGTDAISGSYSAGLSLVPHIGWVYWLGFLFLSIL 182
           + +D +V+ L T+   GS+S+ +SLV  +G    LG   +S+L
Sbjct: 125 SEDDWMVVVLSTNTTGGSFSSAMSLVSKVG----LGHCLVSLL 162

[Close]

BLAST of CsaV3_2G005150.1 vs. TrEMBL
Match: tr|A0A2P4MC66|A0A2P4MC66_QUESU (Putative gpi-anchored protein OS=Quercus suber OX=58331 GN=CFP56_58348 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.0e-22
Identity = 58/146 (39.73%), Postives = 91/146 (62.33%), Query Frame = 0


Query: 20  DLEELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAAIEGDVLLPFNQSQ 79
           D + L +G N YRNS +R AL +N KA C+A++IA N     PC++   G  + P + +Q
Sbjct: 5   DEDNLLQGINSYRNSLNRPALIKNEKADCLADEIA-NELEDEPCTSPTNGATIKPSSTTQ 64

Query: 80  LP-MSHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKYLDNATYTRVGLA 139
           LP +  + +KC +++N TV+G+ILPV VP     ++LTN T +   KY++++ YT  G  
Sbjct: 65  LPDLPKHFKKCRIDVNTTVNGIILPVCVPKLVPTIVLTNYTRTANAKYINSSKYTLAGFG 124

Query: 140 TNEDCLVIALGTDAISGSYSAGLSLV 165
             +D +V  LGT+   GS+S+ +SLV
Sbjct: 125 AEDDWMVTVLGTNTTGGSFSSAISLV 149

The following BLAST results are available for this feature:

BLAST of CsaV3_2G005150.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60893.1	1.1e-97	95.24	hypothetical protein Csa_2G021640 [Cucumis sativus]	[more]
XP_008454795.1	6.7e-87	93.14	PREDICTED: uncharacterized GPI-anchored protein At3g06035-like isoform X1 [Cucum...	[more]
ABR67420.1	2.7e-72	91.39	GPI-anchored protein-like protein [Cucumis melo subsp. melo]	[more]
XP_022965956.1	6.5e-58	69.51	uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima] >XP_02296...	[more]
XP_022938135.1	8.5e-58	68.90	uncharacterized GPI-anchored protein At3g06035-like [Cucurbita moschata] >XP_023...	[more]

BLAST of CsaV3_2G005150.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G06035.1	6.8e-17	32.35	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19250.1	2.0e-16	36.03	Glycoprotein membrane precursor GPI-anchored	[more]
AT1G54860.1	5.7e-16	30.82	Glycoprotein membrane precursor GPI-anchored	[more]

BLAST of CsaV3_2G005150.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84MC0\|UGPI4_ARATH	1.2e-15	32.35	Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|P59833\|UGPI3_ARATH	3.6e-15	36.03	Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CsaV3_2G005150.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LGC0\|A0A0A0LGC0_CUCSA	7.3e-98	95.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021640 PE=4 SV=1	[more]
tr\|A0A1S3BZI4\|A0A1S3BZI4_CUCME	4.4e-87	93.14	uncharacterized GPI-anchored protein At3g06035-like isoform X1 OS=Cucumis melo O...	[more]
tr\|A6YTC6\|A6YTC6_CUCME	1.8e-72	91.39	GPI-anchored protein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=...	[more]
tr\|A0A2N9EV37\|A0A2N9EV37_FAGSY	7.7e-23	37.42	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6535 PE=4 SV=1	[more]
tr\|A0A2P4MC66\|A0A2P4MC66_QUESU	1.0e-22	39.73	Putative gpi-anchored protein OS=Quercus suber OX=58331 GN=CFP56_58348 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_2G005150	CsaV3_2G005150	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G005150.1.exon1	CsaV3_2G005150.1.exon1	exon
CsaV3_2G005150.1.exon2	CsaV3_2G005150.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G005150.1.cds1	CsaV3_2G005150.1.cds1	CDS
CsaV3_2G005150.1.cds2	CsaV3_2G005150.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G005150.1	CsaV3_2G005150.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33976	FAMILY NOT NAMED	coord: 21..183
None	No IPR available	PRODOM	PD208950		coord: 24..183 e-value: 1.0E-17 score: 219.0