CsaV3_2G005070.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G005070.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	transcription factor bHLH94-like
Location	chr2 : 2751170 .. 2752663 (-)
Sequence length	954

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTAGAGGCTGTGGTTTTTTCTCAAGATCCATTATGTTACAATGGAAGCAAAGATCTTTACTCTTTACTTGGAGGAGGAATTTGGGCTAATGGAGGCTTTGAATATCCAGAGATCCCTCATGATTTTCCCGAGAACCAAACAGAAAATTTCCCATTTGAAGATTGGAACTCATCTTCCTCTGTTTTTGTTCCTAACCCTTCCCCTGAAGCTGCTGATTCCAGAAATGGGTTGCTGAAGCCGCCATTAGAGGCTGAATCAATTACTCCGCACCCAATTCGTCCAAGGAAACGAAGACCTAAATCACGCAAGAACAAAGAGGAAATCGAAAATCAAAGAATGACTCACATCGCTGTTGAACGAAATCGAAGAAAACAGATGAATGAATATCTTTCTGTTCTTCGTTCCTTAATGCCAGAGTCTTATGTTCAAAGGGTACCTCCCTCATTTCTCCCATTTTCTTTTTCATTTTCCTTTCTTTCCAACAAAAAGTTAAACGGGCTTTTCGAGTTTCGTATCACTATTGCAACTCATCAGTTTTGAGTTCTTGAGTTAACCGATAATTTAACATTGTATTAGAATTGTTGGTTCTGTTTTGTTATAACTAAATTTACCATACCCATCAGTTTACGTTGAGTTGAGTTATTGTTGACGTATTGGCGTTGCTAAATTTACTATAATCCATAAGCTTAAGTATATTTCTGAGTTGATGGGTAAGTTTAGGTTGAGTTATTGTTGACGAAGGAAGATGACTAAATTTATCTTTACCCGTCACCTTAAACTTTTGGCATTGACTTTATTCTTAGGGCCTGCAATGCCATTTTTTTGCTTGAGCCTAAAGATTTTTGGGTTGATCGATGATTTGACGTTATTTCGACAGGGGGATCAAGCTTCAATTATTGGGGGAGCGATTAATTTTGTGAAGGAGTTGGAACAACAAGTTCAAGTTCTATCCACAGTAGAAACAAAAGGGAAGATTAATAATTCAGCTGAAGGGTGTTGTAATTCAAATTCAAATTCAAATTCAAAAATCCCTTTCACAGAGTTCTTCAGTTTCCCTCAATTCAAAGCAATGGAAGGTTGTTCTTTAGTGAGTGAAAATGAAACTCAATGTTCTTCCACAGTTGCTGATATTGAAGTAACAATGGTAGAAAATCATGCAAATTTGAAAATAAGATCAAAGAGAAGACCAAAACAAATCTTGAAAATTGTTGCTGGCTTGCATTCTCTTTCCCTTTCTGTTCTTCATCTCAATATTTCAACTATCAACCAAATTGTTCTTTATTGTCTCAGTGTCAAGGTTTGTTTTTTTCTTCATTTTTTGAAATGGGTCTTTGTGTTTAGATGTTTTTCATTTGAAAACTTTTTTTCTTTTGGTTTGGAATTTTGTTGTAGGTCGAAGATGATTGCAAGCTGAGTTCTGTTGATGAAATTGCTTCCGCCCTGCATCAGTTGCTTAGTAGAATAGAAGAAGATTCACTTATGAACTGA

mRNA sequence

ATGGCATTAGAGGCTGTGGTTTTTTCTCAAGATCCATTATGTTACAATGGAAGCAAAGATCTTTACTCTTTACTTGGAGGAGGAATTTGGGCTAATGGAGGCTTTGAATATCCAGAGATCCCTCATGATTTTCCCGAGAACCAAACAGAAAATTTCCCATTTGAAGATTGGAACTCATCTTCCTCTGTTTTTGTTCCTAACCCTTCCCCTGAAGCTGCTGATTCCAGAAATGGGTTGCTGAAGCCGCCATTAGAGGCTGAATCAATTACTCCGCACCCAATTCGTCCAAGGAAACGAAGACCTAAATCACGCAAGAACAAAGAGGAAATCGAAAATCAAAGAATGACTCACATCGCTGTTGAACGAAATCGAAGAAAACAGATGAATGAATATCTTTCTGTTCTTCGTTCCTTAATGCCAGAGTCTTATGTTCAAAGGGGGGATCAAGCTTCAATTATTGGGGGAGCGATTAATTTTGTGAAGGAGTTGGAACAACAAGTTCAAGTTCTATCCACAGTAGAAACAAAAGGGAAGATTAATAATTCAGCTGAAGGGTGTTGTAATTCAAATTCAAATTCAAATTCAAAAATCCCTTTCACAGAGTTCTTCAGTTTCCCTCAATTCAAAGCAATGGAAGGTTGTTCTTTAGTGAGTGAAAATGAAACTCAATGTTCTTCCACAGTTGCTGATATTGAAGTAACAATGGTAGAAAATCATGCAAATTTGAAAATAAGATCAAAGAGAAGACCAAAACAAATCTTGAAAATTGTTGCTGGCTTGCATTCTCTTTCCCTTTCTGTTCTTCATCTCAATATTTCAACTATCAACCAAATTGTTCTTTATTGTCTCAGTGTCAAGGTCGAAGATGATTGCAAGCTGAGTTCTGTTGATGAAATTGCTTCCGCCCTGCATCAGTTGCTTAGTAGAATAGAAGAAGATTCACTTATGAACTGA

Coding sequence (CDS)

ATGGCATTAGAGGCTGTGGTTTTTTCTCAAGATCCATTATGTTACAATGGAAGCAAAGATCTTTACTCTTTACTTGGAGGAGGAATTTGGGCTAATGGAGGCTTTGAATATCCAGAGATCCCTCATGATTTTCCCGAGAACCAAACAGAAAATTTCCCATTTGAAGATTGGAACTCATCTTCCTCTGTTTTTGTTCCTAACCCTTCCCCTGAAGCTGCTGATTCCAGAAATGGGTTGCTGAAGCCGCCATTAGAGGCTGAATCAATTACTCCGCACCCAATTCGTCCAAGGAAACGAAGACCTAAATCACGCAAGAACAAAGAGGAAATCGAAAATCAAAGAATGACTCACATCGCTGTTGAACGAAATCGAAGAAAACAGATGAATGAATATCTTTCTGTTCTTCGTTCCTTAATGCCAGAGTCTTATGTTCAAAGGGGGGATCAAGCTTCAATTATTGGGGGAGCGATTAATTTTGTGAAGGAGTTGGAACAACAAGTTCAAGTTCTATCCACAGTAGAAACAAAAGGGAAGATTAATAATTCAGCTGAAGGGTGTTGTAATTCAAATTCAAATTCAAATTCAAAAATCCCTTTCACAGAGTTCTTCAGTTTCCCTCAATTCAAAGCAATGGAAGGTTGTTCTTTAGTGAGTGAAAATGAAACTCAATGTTCTTCCACAGTTGCTGATATTGAAGTAACAATGGTAGAAAATCATGCAAATTTGAAAATAAGATCAAAGAGAAGACCAAAACAAATCTTGAAAATTGTTGCTGGCTTGCATTCTCTTTCCCTTTCTGTTCTTCATCTCAATATTTCAACTATCAACCAAATTGTTCTTTATTGTCTCAGTGTCAAGGTCGAAGATGATTGCAAGCTGAGTTCTGTTGATGAAATTGCTTCCGCCCTGCATCAGTTGCTTAGTAGAATAGAAGAAGATTCACTTATGAACTGA

Protein sequence

MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGGFEYPEIPHDFPENQTENFPFEDWNSSSSVFVPNPSPEAADSRNGLLKPPLEAESITPHPIRPRKRRPKSRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTVETKGKINNSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHANLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEIASALHQLLSRIEEDSLMN

Homology

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BLAST of CsaV3_2G005070.1 vs. NCBI nr
Match: XP_004139191.1 (PREDICTED: transcription factor bHLH94-like [Cucumis sativus] >KGN60884.1 Helix-loop-helix-like protein [Cucumis sativus])

HSP 1 Score: 588.2 bits (1515), Expect = 1.7e-164
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0


Query: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGGFEYPEIPHDFPENQTENFPFEDWNSS 60
           MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGGFEYPEIPHDFPENQTENFPFEDWNSS
Sbjct: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGGFEYPEIPHDFPENQTENFPFEDWNSS 60

Query: 61  SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV 120
           SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV
Sbjct: 61  SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV 120

Query: 121 ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTVETKGKIN 180
           ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTVETKGKIN
Sbjct: 121 ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTVETKGKIN 180

Query: 181 NSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA 240
           NSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA
Sbjct: 181 NSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA 240

Query: 241 NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEIA 300
           NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEIA
Sbjct: 241 NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEIA 300

Query: 301 SALHQLLSRIEEDSLMN 318
           SALHQLLSRIEEDSLMN
Sbjct: 301 SALHQLLSRIEEDSLMN 317

[Close]

BLAST of CsaV3_2G005070.1 vs. NCBI nr
Match: XP_008454918.1 (PREDICTED: transcription factor bHLH94-like [Cucumis melo])

HSP 1 Score: 583.6 bits (1503), Expect = 4.2e-163
Identity = 314/317 (99.05%), Postives = 315/317 (99.37%), Query Frame = 0


Query: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGGFEYPEIPHDFPENQTENFPFEDWNSS 60
           MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANG FEYPEIPHDFPENQTENFPFEDWNSS
Sbjct: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGSFEYPEIPHDFPENQTENFPFEDWNSS 60

Query: 61  SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV 120
           SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV
Sbjct: 61  SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV 120

Query: 121 ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTVETKGKIN 180
           ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLST+ETKGKIN
Sbjct: 121 ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTIETKGKIN 180

Query: 181 NSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA 240
           NSAEGCCNSNSNSNSKIPF EFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA
Sbjct: 181 NSAEGCCNSNSNSNSKIPFAEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA 240

Query: 241 NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEIA 300
           NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEIA
Sbjct: 241 NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEIA 300

Query: 301 SALHQLLSRIEEDSLMN 318
           SALHQLLSRIEEDSLMN
Sbjct: 301 SALHQLLSRIEEDSLMN 317

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BLAST of CsaV3_2G005070.1 vs. NCBI nr
Match: AAO45750.1 (helix-loop-helix-like protein [Cucumis melo subsp. melo])

HSP 1 Score: 526.6 bits (1355), Expect = 6.0e-146
Identity = 284/287 (98.95%), Postives = 285/287 (99.30%), Query Frame = 0


Query: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGGFEYPEIPHDFPENQTENFPFEDWNSS 60
           MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANG FEYPEIPHDFPENQTENFPFEDWNSS
Sbjct: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGSFEYPEIPHDFPENQTENFPFEDWNSS 60

Query: 61  SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV 120
           SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV
Sbjct: 61  SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV 120

Query: 121 ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTVETKGKIN 180
           ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLST+ETKGKIN
Sbjct: 121 ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTIETKGKIN 180

Query: 181 NSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA 240
           NSAEGCCNSNSNSNSKIPF EFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA
Sbjct: 181 NSAEGCCNSNSNSNSKIPFAEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA 240

Query: 241 NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKV 288
           NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKV
Sbjct: 241 NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKV 287

[Close]

BLAST of CsaV3_2G005070.1 vs. NCBI nr
Match: XP_022999125.1 (transcription factor bHLH94-like [Cucurbita maxima])

HSP 1 Score: 434.9 bits (1117), Expect = 2.4e-118
Identity = 241/318 (75.79%), Postives = 258/318 (81.13%), Query Frame = 0


Query: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGGFEYPEIPHDFPENQTENFPFEDWNSS 60
           MALEAVVFSQ         DLY+  GGGIW NG F++P+IPHDFPE QTENFPFEDWNSS
Sbjct: 1   MALEAVVFSQ---------DLYTSFGGGIWTNGSFQFPQIPHDFPEKQTENFPFEDWNSS 60

Query: 61  SSVFVPNPSP-EAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIA 120
           SSVF+P PSP E A SRN    PPLEAES TP+P               +IENQRMTHIA
Sbjct: 61  SSVFLPIPSPEEPAISRN----PPLEAESRTPNPIRPRKRRPKSRKNKEDIENQRMTHIA 120

Query: 121 VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTVETKGKI 180
           VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLST+E K K 
Sbjct: 121 VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMEIKTK- 180

Query: 181 NNSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENH 240
                GC      S+SK PF+EFF+FPQFK+MEGC  + ENETQCSS +ADIEVTMVENH
Sbjct: 181 -----GC------SSSKPPFSEFFTFPQFKSMEGCCSLGENETQCSS-IADIEVTMVENH 240

Query: 241 ANLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEI 300
           ANLKIRSKRRPKQ LKIVAGLHSL LSVLHLNISTINQIVLYCLSVKVEDDCKL+SVDEI
Sbjct: 241 ANLKIRSKRRPKQALKIVAGLHSLCLSVLHLNISTINQIVLYCLSVKVEDDCKLNSVDEI 292

Query: 301 ASALHQLLSRIEEDSLMN 318
           ASALHQLL RIEE+S+MN
Sbjct: 301 ASALHQLLCRIEEESVMN 292

[Close]

BLAST of CsaV3_2G005070.1 vs. NCBI nr
Match: XP_022946286.1 (transcription factor bHLH94-like isoform X2 [Cucurbita moschata] >XP_023521809.1 transcription factor bHLH94-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023546564.1 transcription factor bHLH94-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 433.7 bits (1114), Expect = 5.3e-118
Identity = 240/318 (75.47%), Postives = 258/318 (81.13%), Query Frame = 0


Query: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGGFEYPEIPHDFPENQTENFPFEDWNSS 60
           MALEAVVFSQ         DLY+  GGGIW NG F++P+IPHDFPE QTEN+PFEDWNSS
Sbjct: 1   MALEAVVFSQ---------DLYTSFGGGIWTNGSFQFPQIPHDFPEKQTENYPFEDWNSS 60

Query: 61  SSVFVPNPSP-EAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIA 120
           SSV +P PSP E A SRN    PPLEAES TP+P               +IENQRMTHIA
Sbjct: 61  SSVLLPIPSPEEPAISRN----PPLEAESRTPNPIRPRKRRPKSRKNKEDIENQRMTHIA 120

Query: 121 VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTVETKGKI 180
           VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLST+ETK K 
Sbjct: 121 VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMETKTK- 180

Query: 181 NNSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENH 240
                GC      S+SK PF+EFF+FPQFK+MEGC  + ENETQCSS +ADIEVTMVENH
Sbjct: 181 -----GC------SSSKPPFSEFFTFPQFKSMEGCCSLGENETQCSS-IADIEVTMVENH 240

Query: 241 ANLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEI 300
           ANLKIRSKRRPKQ LKIVAGLHSL LSVLHLNISTINQIVLYCLSVKVEDDCKL+SVDEI
Sbjct: 241 ANLKIRSKRRPKQALKIVAGLHSLCLSVLHLNISTINQIVLYCLSVKVEDDCKLNSVDEI 292

Query: 301 ASALHQLLSRIEEDSLMN 318
           ASALHQLL RIEE+S+MN
Sbjct: 301 ASALHQLLCRIEEESVMN 292

[Close]

BLAST of CsaV3_2G005070.1 vs. TAIR10
Match: AT1G22490.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 207.2 bits (526), Expect = 1.5e-53
Identity = 111/206 (53.88%), Postives = 157/206 (76.21%), Query Frame = 0


Query: 109 EIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQ 168
           EIENQRMTHIAVERNRRKQMNEYL+VLRSLMP SY QRGDQASI+GGAIN+VKELE    
Sbjct: 109 EIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELE---H 168

Query: 169 VLSTVETKGKINNSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTV 228
           +L ++E K    +  +G  +  S S+   PFT+FFSFPQ+         S +  + SS+ 
Sbjct: 169 ILQSMEPKRTRTHDPKG--DKTSTSSLVGPFTDFFSFPQYSTKS-----SSDVPESSSSP 228

Query: 229 ADIEVTMVENHANLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVE 288
           A+IEVT+ E+HAN+KI +K++P+Q+LK++  L SL L++LHLN++T++  +LY +SV+VE
Sbjct: 229 AEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVE 288

Query: 289 DDCKLSSVDEIASALHQLLSRIEEDS 315
           +  +L++VD+IA+AL+Q + RI+E++
Sbjct: 289 EGSQLNTVDDIATALNQTIRRIQEET 304

[Close]

BLAST of CsaV3_2G005070.1 vs. TAIR10
Match: AT1G72210.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 198.7 bits (504), Expect = 5.2e-51
Identity = 107/205 (52.20%), Postives = 152/205 (74.15%), Query Frame = 0


Query: 110 IENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQV 169
           IENQRMTHIAVERNRRKQMNEYL+VLRSLMP  Y QRGDQASI+GGAIN++KELE  +Q 
Sbjct: 120 IENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQS 179

Query: 170 LSTVETKGKINNSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTVA 229
           +         +  A       ++++S  PF++FF+FPQ+      +  +E        +A
Sbjct: 180 MEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAEG-------MA 239

Query: 230 DIEVTMVENHANLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVED 289
           +IEVTMVE+HA+LKI +K+RP+Q+LK+V+ + SL L++LHLN++T +  VLY +SVKVE+
Sbjct: 240 EIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKVEE 299

Query: 290 DCKLSSVDEIASALHQLLSRIEEDS 315
             +L++V++IA+A++Q+L RIEE+S
Sbjct: 300 GSQLNTVEDIAAAVNQILRRIEEES 317

[Close]

BLAST of CsaV3_2G005070.1 vs. TAIR10
Match: AT5G46690.1 (beta HLH protein 71)

HSP 1 Score: 174.5 bits (441), Expect = 1.1e-43
Identity = 103/220 (46.82%), Postives = 144/220 (65.45%), Query Frame = 0


Query: 111 ENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVL 170
           ENQRMTHIAVERNRR+QMN++LSVLRSLMP+ +  +GDQASI+GGAI+F+KELE ++  L
Sbjct: 84  ENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSL 143

Query: 171 STVE-TKGKINNSAEGCCNSNSNSNSKIPF-TEFFSFPQFKAMEGCSLVSENETQCSSTV 230
              +    K+N S     + +SN   + P      S  QF  +       EN    +S+V
Sbjct: 144 EAQKHHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQF-FLHSYDPSQENRNGSTSSV 203

Query: 231 ----ADIEVTMVENHANLKIRSKRR-----------PKQILKIVAGLHSLSLSVLHLNIS 290
                D+EVT++E HAN++I S+RR           P Q+ K+VA L SLSLS+LHL+++
Sbjct: 204 KTPMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLSKLVASLQSLSLSILHLSVT 263

Query: 291 TINQIVLYCLSVKVEDDCKLSSVDEIASALHQLLSRIEED 314
           T++   +Y +S KVE+ C+LSSVD+IA A+H +LS IEE+
Sbjct: 264 TLDNYAIYSISAKVEESCQLSSVDDIAGAVHHMLSIIEEE 302

[Close]

BLAST of CsaV3_2G005070.1 vs. TAIR10
Match: AT5G65320.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 151.4 bits (381), Expect = 9.6e-37
Identity = 89/211 (42.18%), Postives = 128/211 (60.66%), Query Frame = 0


Query: 111 ENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVL 170
           ENQRM HIAVERNRRKQMN +LS+L+S+MP SY Q  DQASII G I+++K+LEQ++Q L
Sbjct: 98  ENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLEQRLQSL 157

Query: 171 STVETKGKINNSAEGCCNSNSNSNSKIPFTEFFSFPQFK-------AMEGCSLVSENETQ 230
                  K+N S                F++FF FPQ+                      
Sbjct: 158 EAQLKATKLNQSPN-------------IFSDFFMFPQYSXXXXXXXXXXXXXXXXXXXXX 217

Query: 231 CSSTVADIEVTMVENHANLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCL 290
                AD+EVTMVE HAN+K+ +K +P+ + KI+   +SL LS LHLN++T   + L+  
Sbjct: 218 XXXXXADVEVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFTF 277

Query: 291 SVKVEDDCKLS-SVDEIASALHQLLSRIEED 314
           SVKVE DC+L+ S +E+A+ +H+++ R+ ++
Sbjct: 278 SVKVEADCQLTPSGNEVANTVHEVVRRVHKE 295

[Close]

BLAST of CsaV3_2G005070.1 vs. TAIR10
Match: AT3G24140.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 149.4 bits (376), Expect = 3.6e-36
Identity = 91/210 (43.33%), Postives = 130/210 (61.90%), Query Frame = 0


Query: 110 IENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQV 169
           +E+QRMTHIAVERNRRKQMNE+L VLRSLMP SYVQRGDQASIIGGAI FV+ELEQ +Q 
Sbjct: 192 VESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQC 251

Query: 170 LSTVETKGKINNSAEGCCNSNSNSNSKIPFTEFFSFP-----QFKAMEGCSLVSENETQC 229
           L + + +  +  +                     + P         +EG   + E   + 
Sbjct: 252 LESQKRRRILGETGRDMTXXXXXXXXXXXXXANQAQPLIITGNVTELEGGGGLREETAEN 311

Query: 230 SSTVADIEVTMVENHANLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLS 289
            S +AD+EV ++   A +KI S+RRP Q++K +A L  L LS+LH NI+T+ Q VLY  +
Sbjct: 312 KSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYSFN 371

Query: 290 VKVEDDCKLSSVDEIASALHQLLSRIEEDS 315
           VK+  + + ++ ++IAS++ Q+ S I  ++
Sbjct: 372 VKITSETRFTA-EDIASSIQQIFSFIHANT 400

[Close]

BLAST of CsaV3_2G005070.1 vs. Swiss-Prot
Match: sp|Q9SK91|BH094_ARATH (Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2)

HSP 1 Score: 207.2 bits (526), Expect = 2.7e-52
Identity = 111/206 (53.88%), Postives = 157/206 (76.21%), Query Frame = 0


Query: 109 EIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQ 168
           EIENQRMTHIAVERNRRKQMNEYL+VLRSLMP SY QRGDQASI+GGAIN+VKELE    
Sbjct: 109 EIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELE---H 168

Query: 169 VLSTVETKGKINNSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTV 228
           +L ++E K    +  +G  +  S S+   PFT+FFSFPQ+         S +  + SS+ 
Sbjct: 169 ILQSMEPKRTRTHDPKG--DKTSTSSLVGPFTDFFSFPQYSTKS-----SSDVPESSSSP 228

Query: 229 ADIEVTMVENHANLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVE 288
           A+IEVT+ E+HAN+KI +K++P+Q+LK++  L SL L++LHLN++T++  +LY +SV+VE
Sbjct: 229 AEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVE 288

Query: 289 DDCKLSSVDEIASALHQLLSRIEEDS 315
           +  +L++VD+IA+AL+Q + RI+E++
Sbjct: 289 EGSQLNTVDDIATALNQTIRRIQEET 304

[Close]

BLAST of CsaV3_2G005070.1 vs. Swiss-Prot
Match: sp|Q9C7T4|BH096_ARATH (Transcription factor bHLH96 OS=Arabidopsis thaliana OX=3702 GN=BHLH96 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 9.4e-50
Identity = 107/205 (52.20%), Postives = 152/205 (74.15%), Query Frame = 0


Query: 110 IENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQV 169
           IENQRMTHIAVERNRRKQMNEYL+VLRSLMP  Y QRGDQASI+GGAIN++KELE  +Q 
Sbjct: 120 IENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQS 179

Query: 170 LSTVETKGKINNSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTVA 229
           +         +  A       ++++S  PF++FF+FPQ+      +  +E        +A
Sbjct: 180 MEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAEG-------MA 239

Query: 230 DIEVTMVENHANLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVED 289
           +IEVTMVE+HA+LKI +K+RP+Q+LK+V+ + SL L++LHLN++T +  VLY +SVKVE+
Sbjct: 240 EIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKVEE 299

Query: 290 DCKLSSVDEIASALHQLLSRIEEDS 315
             +L++V++IA+A++Q+L RIEE+S
Sbjct: 300 GSQLNTVEDIAAAVNQILRRIEEES 317

[Close]

BLAST of CsaV3_2G005070.1 vs. Swiss-Prot
Match: sp|Q56XR0|BH071_ARATH (Transcription factor bHLH71 OS=Arabidopsis thaliana OX=3702 GN=BHLH71 PE=1 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.9e-42
Identity = 103/220 (46.82%), Postives = 144/220 (65.45%), Query Frame = 0


Query: 111 ENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVL 170
           ENQRMTHIAVERNRR+QMN++LSVLRSLMP+ +  +GDQASI+GGAI+F+KELE ++  L
Sbjct: 84  ENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSL 143

Query: 171 STVE-TKGKINNSAEGCCNSNSNSNSKIPF-TEFFSFPQFKAMEGCSLVSENETQCSSTV 230
              +    K+N S     + +SN   + P      S  QF  +       EN    +S+V
Sbjct: 144 EAQKHHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQF-FLHSYDPSQENRNGSTSSV 203

Query: 231 ----ADIEVTMVENHANLKIRSKRR-----------PKQILKIVAGLHSLSLSVLHLNIS 290
                D+EVT++E HAN++I S+RR           P Q+ K+VA L SLSLS+LHL+++
Sbjct: 204 KTPMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLSKLVASLQSLSLSILHLSVT 263

Query: 291 TINQIVLYCLSVKVEDDCKLSSVDEIASALHQLLSRIEED 314
           T++   +Y +S KVE+ C+LSSVD+IA A+H +LS IEE+
Sbjct: 264 TLDNYAIYSISAKVEESCQLSSVDDIAGAVHHMLSIIEEE 302

[Close]

BLAST of CsaV3_2G005070.1 vs. Swiss-Prot
Match: sp|Q9FKQ6|BH099_ARATH (Transcription factor bHLH99 OS=Arabidopsis thaliana OX=3702 GN=BHLH99 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.7e-35
Identity = 89/211 (42.18%), Postives = 128/211 (60.66%), Query Frame = 0


Query: 111 ENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVL 170
           ENQRM HIAVERNRRKQMN +LS+L+S+MP SY Q  DQASII G I+++K+LEQ++Q L
Sbjct: 98  ENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLEQRLQSL 157

Query: 171 STVETKGKINNSAEGCCNSNSNSNSKIPFTEFFSFPQFK-------AMEGCSLVSENETQ 230
                  K+N S                F++FF FPQ+                      
Sbjct: 158 EAQLKATKLNQSPN-------------IFSDFFMFPQYSXXXXXXXXXXXXXXXXXXXXX 217

Query: 231 CSSTVADIEVTMVENHANLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCL 290
                AD+EVTMVE HAN+K+ +K +P+ + KI+   +SL LS LHLN++T   + L+  
Sbjct: 218 XXXXXADVEVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFTF 277

Query: 291 SVKVEDDCKLS-SVDEIASALHQLLSRIEED 314
           SVKVE DC+L+ S +E+A+ +H+++ R+ ++
Sbjct: 278 SVKVEADCQLTPSGNEVANTVHEVVRRVHKE 295

[Close]

BLAST of CsaV3_2G005070.1 vs. Swiss-Prot
Match: sp|Q56YJ8|FAMA_ARATH (Transcription factor FAMA OS=Arabidopsis thaliana OX=3702 GN=FAMA PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 6.6e-35
Identity = 91/210 (43.33%), Postives = 130/210 (61.90%), Query Frame = 0


Query: 110 IENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQV 169
           +E+QRMTHIAVERNRRKQMNE+L VLRSLMP SYVQRGDQASIIGGAI FV+ELEQ +Q 
Sbjct: 192 VESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQC 251

Query: 170 LSTVETKGKINNSAEGCCNSNSNSNSKIPFTEFFSFP-----QFKAMEGCSLVSENETQC 229
           L + + +  +  +                     + P         +EG   + E   + 
Sbjct: 252 LESQKRRRILGETGRDMTXXXXXXXXXXXXXANQAQPLIITGNVTELEGGGGLREETAEN 311

Query: 230 SSTVADIEVTMVENHANLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLS 289
            S +AD+EV ++   A +KI S+RRP Q++K +A L  L LS+LH NI+T+ Q VLY  +
Sbjct: 312 KSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYSFN 371

Query: 290 VKVEDDCKLSSVDEIASALHQLLSRIEEDS 315
           VK+  + + ++ ++IAS++ Q+ S I  ++
Sbjct: 372 VKITSETRFTA-EDIASSIQQIFSFIHANT 400

[Close]

BLAST of CsaV3_2G005070.1 vs. TrEMBL
Match: tr|A0A0A0LIK9|A0A0A0LIK9_CUCSA (Helix-loop-helix-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G021550 PE=4 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 1.1e-164
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0


Query: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGGFEYPEIPHDFPENQTENFPFEDWNSS 60
           MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGGFEYPEIPHDFPENQTENFPFEDWNSS
Sbjct: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGGFEYPEIPHDFPENQTENFPFEDWNSS 60

Query: 61  SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV 120
           SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV
Sbjct: 61  SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV 120

Query: 121 ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTVETKGKIN 180
           ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTVETKGKIN
Sbjct: 121 ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTVETKGKIN 180

Query: 181 NSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA 240
           NSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA
Sbjct: 181 NSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA 240

Query: 241 NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEIA 300
           NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEIA
Sbjct: 241 NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEIA 300

Query: 301 SALHQLLSRIEEDSLMN 318
           SALHQLLSRIEEDSLMN
Sbjct: 301 SALHQLLSRIEEDSLMN 317

[Close]

BLAST of CsaV3_2G005070.1 vs. TrEMBL
Match: tr|A0A1S3C0F1|A0A1S3C0F1_CUCME (transcription factor bHLH94-like OS=Cucumis melo OX=3656 GN=LOC103495217 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 2.8e-163
Identity = 314/317 (99.05%), Postives = 315/317 (99.37%), Query Frame = 0


Query: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGGFEYPEIPHDFPENQTENFPFEDWNSS 60
           MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANG FEYPEIPHDFPENQTENFPFEDWNSS
Sbjct: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGSFEYPEIPHDFPENQTENFPFEDWNSS 60

Query: 61  SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV 120
           SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV
Sbjct: 61  SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV 120

Query: 121 ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTVETKGKIN 180
           ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLST+ETKGKIN
Sbjct: 121 ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTIETKGKIN 180

Query: 181 NSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA 240
           NSAEGCCNSNSNSNSKIPF EFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA
Sbjct: 181 NSAEGCCNSNSNSNSKIPFAEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA 240

Query: 241 NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEIA 300
           NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEIA
Sbjct: 241 NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEIA 300

Query: 301 SALHQLLSRIEEDSLMN 318
           SALHQLLSRIEEDSLMN
Sbjct: 301 SALHQLLSRIEEDSLMN 317

[Close]

BLAST of CsaV3_2G005070.1 vs. TrEMBL
Match: tr|Q84KB2|Q84KB2_CUCME (Helix-loop-helix-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 4.0e-146
Identity = 284/287 (98.95%), Postives = 285/287 (99.30%), Query Frame = 0


Query: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGGFEYPEIPHDFPENQTENFPFEDWNSS 60
           MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANG FEYPEIPHDFPENQTENFPFEDWNSS
Sbjct: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGSFEYPEIPHDFPENQTENFPFEDWNSS 60

Query: 61  SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV 120
           SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV
Sbjct: 61  SSVFVPNPSPEAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIAV 120

Query: 121 ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTVETKGKIN 180
           ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLST+ETKGKIN
Sbjct: 121 ERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTIETKGKIN 180

Query: 181 NSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA 240
           NSAEGCCNSNSNSNSKIPF EFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA
Sbjct: 181 NSAEGCCNSNSNSNSKIPFAEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENHA 240

Query: 241 NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKV 288
           NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKV
Sbjct: 241 NLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKV 287

[Close]

BLAST of CsaV3_2G005070.1 vs. TrEMBL
Match: tr|U5GAK1|U5GAK1_POPTR (BHLH family protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G039800v3 PE=2 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 195/351 (55.56%), Postives = 243/351 (69.23%), Query Frame = 0


Query: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGGFEYPEIPHD------FPENQTENFPF 60
           MALEA VF QD   ++ SK+LY+LLGG    + G +  E   D      F ENQTE F  
Sbjct: 1   MALEAAVFQQDWFGHS-SKELYNLLGGNWSYDFGLDQNEEDQDNSCSSYFLENQTETFLH 60

Query: 61  EDWNS----------------SSSVFVPNPSPEAADSRNGLLK--------PPLEAESIT 120
           EDWNS                + S  +P+ S  + D+ NGLL                  
Sbjct: 61  EDWNSFQPPNSMVPHLNDLHLTCSNNIPSSSDASIDAANGLLSTAPXXXXXXXXXXXXXX 120

Query: 121 PHPXXXXXXXXXXXXXXXEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQA 180
                XXXXXXXXXXXXXEIENQRMTHIAVERNRRKQMNEYLSVLR+LMPESYVQRGDQA
Sbjct: 121 MPATRXXXXXXXXXXXXXEIENQRMTHIAVERNRRKQMNEYLSVLRALMPESYVQRGDQA 180

Query: 181 SIIGGAINFVKELEQQVQVLSTVETKGKINNSAEGCCNSNSNSNSKIPFTEFFSFPQF-- 240
           SIIGGAINFVKELEQ++QVL   +   K+  +++G    N    S +PF+EFF+FPQ+  
Sbjct: 181 SIIGGAINFVKELEQKMQVLGACK---KMKENSDG---DNQQHVSSLPFSEFFTFPQYST 240

Query: 241 KAMEGCSLVSENET--QCSSTVADIEVTMVENHANLKIRSKRRPKQILKIVAGLHSLSLS 300
            ++   + V +NE   +  ST+ADIEVTMVE+HANLKIRSKRRPKQ+LK+V+GLHS+ L+
Sbjct: 241 SSIHFENSVGKNEKLHKTQSTIADIEVTMVESHANLKIRSKRRPKQLLKVVSGLHSMRLT 300

Query: 301 VLHLNISTINQIVLYCLSVKVEDDCKLSSVDEIASALHQLLSRIEEDSLMN 318
           VLHLN++T++QIVLY LSVKVEDDCKL+SVDEIA+A++Q+L RI+E+ ++N
Sbjct: 301 VLHLNVTTVDQIVLYSLSVKVEDDCKLTSVDEIATAVYQMLGRIQEECVLN 344

[Close]

BLAST of CsaV3_2G005070.1 vs. TrEMBL
Match: tr|A0A2I4HRB1|A0A2I4HRB1_9ROSI (transcription factor bHLH94-like OS=Juglans regia OX=51240 GN=LOC109020625 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.4e-74
Identity = 190/339 (56.05%), Postives = 240/339 (70.80%), Query Frame = 0


Query: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWA-----NGGFEYPEIPHDFPENQTENFPFE 60
           MALEAVV+ QDP  Y+G    Y+LL G  W+         E      DF ENQTEN  + 
Sbjct: 1   MALEAVVYPQDPFAYSG----YNLLAGSNWSYDLGPEREDEQAGGTFDFLENQTENCLYG 60

Query: 61  DWNSSSSVFVP--------NPSPEAADSRNGLLKPPLEAESIT-----PHPXXXXXXXXX 120
           D++SS+S  +P        NPS    D+ N       E++ +         XXXXXXXXX
Sbjct: 61  DYHSSTSSMLPHLNELHSYNPS---LDATNATALTADESQQLVDXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKE 180
           XXXXXXEIENQRMTHIAVERNRRKQMNEYLSVLRSLMP+SYVQRGDQASIIGGAINFVKE
Sbjct: 121 XXXXXXEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKE 180

Query: 181 LEQQVQVLSTVETKGKINNSAEGCCNSNSNSNSKIPFTEFFSFPQFKA----MEGCSLVS 240
           LEQ++Q+L         +N  E     NS++ + +PF+EFF+FPQ+       +   +++
Sbjct: 181 LEQRLQLLGA-------HNEME----ENSDACASLPFSEFFTFPQYSTSSNYCDNSVVMT 240

Query: 241 ENETQCSSTVADIEVTMVENHANLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQI 300
           E   +    +ADIEVTMVE+HANLKIRSKRRPKQ+LK+V+GLH+L L+VLHLN++T+++I
Sbjct: 241 EQVGETRLAIADIEVTMVESHANLKIRSKRRPKQLLKVVSGLHTLRLTVLHLNVTTVDEI 300

Query: 301 VLYCLSVKVEDDCKLSSVDEIASALHQLLSRIEEDSLMN 318
           VLY LSVKVEDDCKLSSVDEIA+A+HQ+L RI+E++++N
Sbjct: 301 VLYSLSVKVEDDCKLSSVDEIATAVHQMLGRIKEEAMLN 321

The following BLAST results are available for this feature:

BLAST of CsaV3_2G005070.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139191.1	1.7e-164	100.00	PREDICTED: transcription factor bHLH94-like [Cucumis sativus] >KGN60884.1 Helix-...	[more]
XP_008454918.1	4.2e-163	99.05	PREDICTED: transcription factor bHLH94-like [Cucumis melo]	[more]
AAO45750.1	6.0e-146	98.95	helix-loop-helix-like protein [Cucumis melo subsp. melo]	[more]
XP_022999125.1	2.4e-118	75.79	transcription factor bHLH94-like [Cucurbita maxima]	[more]
XP_022946286.1	5.3e-118	75.47	transcription factor bHLH94-like isoform X2 [Cucurbita moschata] >XP_023521809.1...	[more]

BLAST of CsaV3_2G005070.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G22490.1	1.5e-53	53.88	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G72210.1	5.2e-51	52.20	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G46690.1	1.1e-43	46.82	beta HLH protein 71	[more]
AT5G65320.1	9.6e-37	42.18	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G24140.1	3.6e-36	43.33	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of CsaV3_2G005070.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SK91\|BH094_ARATH	2.7e-52	53.88	Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2	[more]
sp\|Q9C7T4\|BH096_ARATH	9.4e-50	52.20	Transcription factor bHLH96 OS=Arabidopsis thaliana OX=3702 GN=BHLH96 PE=1 SV=1	[more]
sp\|Q56XR0\|BH071_ARATH	1.9e-42	46.82	Transcription factor bHLH71 OS=Arabidopsis thaliana OX=3702 GN=BHLH71 PE=1 SV=1	[more]
sp\|Q9FKQ6\|BH099_ARATH	1.7e-35	42.18	Transcription factor bHLH99 OS=Arabidopsis thaliana OX=3702 GN=BHLH99 PE=2 SV=1	[more]
sp\|Q56YJ8\|FAMA_ARATH	6.6e-35	43.33	Transcription factor FAMA OS=Arabidopsis thaliana OX=3702 GN=FAMA PE=1 SV=1	[more]

BLAST of CsaV3_2G005070.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LIK9\|A0A0A0LIK9_CUCSA	1.1e-164	100.00	Helix-loop-helix-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G021550 PE=4 SV...	[more]
tr\|A0A1S3C0F1\|A0A1S3C0F1_CUCME	2.8e-163	99.05	transcription factor bHLH94-like OS=Cucumis melo OX=3656 GN=LOC103495217 PE=4 SV...	[more]
tr\|Q84KB2\|Q84KB2_CUCME	4.0e-146	98.95	Helix-loop-helix-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|U5GAK1\|U5GAK1_POPTR	1.3e-75	55.56	BHLH family protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G039800v3 PE=2 SV...	[more]
tr\|A0A2I4HRB1\|A0A2I4HRB1_9ROSI	2.4e-74	56.05	transcription factor bHLH94-like OS=Juglans regia OX=51240 GN=LOC109020625 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036638	HLH_DNA-bd_sf
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_2G005070	CsaV3_2G005070	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G005070.1	CsaV3_2G005070.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G005070.1.cds3	CsaV3_2G005070.1.cds3	CDS
CsaV3_2G005070.1.cds2	CsaV3_2G005070.1.cds2	CDS
CsaV3_2G005070.1.cds1	CsaV3_2G005070.1.cds1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G005070.1.exon3	CsaV3_2G005070.1.exon3	exon
CsaV3_2G005070.1.exon2	CsaV3_2G005070.1.exon2	exon
CsaV3_2G005070.1.exon1	CsaV3_2G005070.1.exon1	exon

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 118..169 e-value: 2.1E-10 score: 50.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 113..164 e-value: 1.8E-10 score: 40.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 112..163 score: 15.402
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	CDD	cd00083	HLH	coord: 111..168 e-value: 6.35874E-14 score: 64.5427
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	G3DSA:4.10.280.10		coord: 95..176 e-value: 9.1E-12 score: 46.8
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 112..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..109
None	No IPR available	PANTHER	PTHR11969:SF26	SUBFAMILY NOT NAMED	coord: 2..317
None	No IPR available	PANTHER	PTHR11969	MAX DIMERIZATION, MAD	coord: 2..317