CsaV3_1G044120.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G044120.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Jasmonate induced protein
Location	chr1 : 29351895 .. 29354454 (-)
Sequence length	1038

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAATCGTTCTTTTTCTATCTTCAACTTTCTCATATACAACTTTTAGTTATACTATTTTACTCCTCAAATGGCTCCTCTTTTGCTTCTTCAGGGTGATGAACTAAGGAAACTTGCAAGAATAGTTCGGAACCAAGAGGTTGAAATATTAGGGAATCTCAATTTCCCATCCGAACAAGAACAAGCCAAATATTTGAGAAATGTGGGAGATAATTACCATGCAACGCTAAAGCTTTTGGATGATGCAGATGGCGTCAAACAAATGTTCAAAGACGACGAAACTAAATCGTCAATTGCTCATGAATCGTATTCCTACGTGGAAAAAGCTGTTAACATCTCGCTTCAAGCAGTAAGAAACTATGCACTGCGAACAAACTATCTATCAAAGATCGACGCGCACTCGAAAGACATTTTTGAAGCATTAAAAACCTTAGATCCAGAGAATGTAACCAATGTGGCTCGTTTAGCCAAGGAGGCTAATCAATATAATGAGAGTATGCAACAAGTCATGCTAAACCATCAAAGTCCAGCATCACGCAACTTTTCCAAATGGCTAAAAGATAGTGGAACTAAGTTTGAAGATCTTATCACAAGGTAAACTCAACGAATAACACGTTTTCTTTCAAAATACAATATACTTTTTTCTAACCTCAAGTTTTATCCATTTTTCGTTAAAAAAATCGTTTTAGAGTTTTCTAAATGGCTAGTTTTGTGTTGATATGTATGTAGATACATGGTTTCTTTGATATAACATGTTCACTAATCAAATGTTAAATTAAAAAATAATTAATTTTTAATACCTAGCTAGTGGATAATTTTATCATGAATTTTTTAAAAACTTATCATCACCTGATTGTTCTTTTATTTATAGAATTTGTGTATCATGCTCAAACTGGTATATCATGAATTTAAAATTTTATTTATTTGAAAATTTTAATTCCAAGTTTAATAGGTTAACTTTCAAGCCGCTAAATTTTTTAATTTGTGTTTAAATATTCTTTAAACGTAGATAGTTCATATTTTTAAATTTGAATCTAATAAATGTTAATGAAAATTTTAATCCACGTTAAATTGACCTTAAACTTATAATGTCGTAGATAATAATTTTTTTTATTGAAACCTTAAATTTAAACATTTTATGTTTAAGGTTAACGTTAAAGAGATCTATTGGATGCAAAATTTACCATTCAAGAATTTGTGTGACACAAAATCTAAAATTTATGTATTTAGCACATATTTTAAAGGACGACAATCATATAAAAACAAATATAAAAAATTCACGAACTAAATATATTTACATTATAATAATTCACGTGCCTTGACATAGAGTTATCGATACGTGGTTATGTCATTTTTGTATACAACTCAATGCCAATTAGTACTATAGTTTATGGAACAATTTAATTTAATATAAGTTTTTCAGGGTTCCTATGGATTACAGTTTTCAAATTTCATAAGATTAAACTATATATATATCGTTTTAGGAGTGGTAATCTCAGCAAACTCCCCTAATGTCTCTTAAATGTGAAACTTGTTAGGTACCAAAATAAGCGTGGCTTTTCAGGGCTTTTCAAGAATTTGGCAGATGAAGAAAAATTGCTGGTAAATATATATATGATCCTATATTAAATGATAGTATCTTATCTAGCTTCACTTTCTTGTCATTTGAAGGTTGTAAGATGATATTTTCATATTTTCCTTTTCTCCATTATTTTTTTTCCATTTTTCTTAAGAAACGTGTGTGTCTGATAATAAACTTTTACTTCTTAACAACTTATTAAATGATTCTAAAAATTGAATGTAAAATTTTGAAACATGAAATCCTATTTTAAAATATTCTGAATAATTCATATTTTGAAGTTTTCGATCAGCTCATGCTTAACCAATAATATCCAATTTTGAAATATGATGAGTACATGGGATGTATGTGTGTACTTAGGTGTATAACGACATCATTGTGGCTTCTGGGCGAGGAAGTGTGGTAGCAGACACGTTATCAACGATCTCTGGTGTAGCGGGCATTTTGTTTCTCATCCTCGCAGCTGGAGTAATTGTATGGGACATCTTTACAGCTGAACATGTTCTCCAAACAGCAACAAAAGATGTGATGATGACTGTTGCAACAGTGGGTGGGGCAATGGTTGGACAAGTTGTGGGAGCTGCTTTGCCAACTTTAGCTGGTGTTGAAGCTTCTGCTCTATTTTTGATGGCCACTGCAGTCATAGGTAGCATTGTCGGAGCTTTTGTAGTAGGTGCCTTTGTTGGTTGGTTGGTTGATCATATCTTTAGCTCCGGAGGGCATTATTCCCACGAAACTGATAGCCACACTTGCTATGTCGCCCCATTGCCTGATGGTGAGGCCATCGCACGTCAAATTGTTCACCAGTAGAACTCTATGCTTATTGCATGCGTCTCCACGTCAAATAAGTTGAAAACAATACTGCTTTCAAGTTAATTTATATCAATAAGGTTGGGTTTTATACCCTAAACTCATGGGTTTGTAAAAATAAATAAATTTCTAATTATTAATAAAATATTTGTTATTTTATTCTATGTCTACG

mRNA sequence

ATGGCTCCTCTTTTGCTTCTTCAGGGTGATGAACTAAGGAAACTTGCAAGAATAGTTCGGAACCAAGAGGTTGAAATATTAGGGAATCTCAATTTCCCATCCGAACAAGAACAAGCCAAATATTTGAGAAATGTGGGAGATAATTACCATGCAACGCTAAAGCTTTTGGATGATGCAGATGGCGTCAAACAAATGTTCAAAGACGACGAAACTAAATCGTCAATTGCTCATGAATCGTATTCCTACGTGGAAAAAGCTGTTAACATCTCGCTTCAAGCAGTAAGAAACTATGCACTGCGAACAAACTATCTATCAAAGATCGACGCGCACTCGAAAGACATTTTTGAAGCATTAAAAACCTTAGATCCAGAGAATGTAACCAATGTGGCTCGTTTAGCCAAGGAGGCTAATCAATATAATGAGAGTATGCAACAAGTCATGCTAAACCATCAAAGTCCAGCATCACGCAACTTTTCCAAATGGCTAAAAGATAGTGGAACTAAGTTTGAAGATCTTATCACAAGGTACCAAAATAAGCGTGGCTTTTCAGGGCTTTTCAAGAATTTGGCAGATGAAGAAAAATTGCTGGTGTATAACGACATCATTGTGGCTTCTGGGCGAGGAAGTGTGGTAGCAGACACGTTATCAACGATCTCTGGTGTAGCGGGCATTTTGTTTCTCATCCTCGCAGCTGGAGTAATTGTATGGGACATCTTTACAGCTGAACATGTTCTCCAAACAGCAACAAAAGATGTGATGATGACTGTTGCAACAGTGGGTGGGGCAATGGTTGGACAAGTTGTGGGAGCTGCTTTGCCAACTTTAGCTGGTGTTGAAGCTTCTGCTCTATTTTTGATGGCCACTGCAGTCATAGGTAGCATTGTCGGAGCTTTTGTAGTAGGTGCCTTTGTTGGTTGGTTGGTTGATCATATCTTTAGCTCCGGAGGGCATTATTCCCACGAAACTGATAGCCACACTTGCTATGTCGCCCCATTGCCTGATGGTGAGGCCATCGCACGTCAAATTGTTCACCAGTAG

Coding sequence (CDS)

ATGGCTCCTCTTTTGCTTCTTCAGGGTGATGAACTAAGGAAACTTGCAAGAATAGTTCGGAACCAAGAGGTTGAAATATTAGGGAATCTCAATTTCCCATCCGAACAAGAACAAGCCAAATATTTGAGAAATGTGGGAGATAATTACCATGCAACGCTAAAGCTTTTGGATGATGCAGATGGCGTCAAACAAATGTTCAAAGACGACGAAACTAAATCGTCAATTGCTCATGAATCGTATTCCTACGTGGAAAAAGCTGTTAACATCTCGCTTCAAGCAGTAAGAAACTATGCACTGCGAACAAACTATCTATCAAAGATCGACGCGCACTCGAAAGACATTTTTGAAGCATTAAAAACCTTAGATCCAGAGAATGTAACCAATGTGGCTCGTTTAGCCAAGGAGGCTAATCAATATAATGAGAGTATGCAACAAGTCATGCTAAACCATCAAAGTCCAGCATCACGCAACTTTTCCAAATGGCTAAAAGATAGTGGAACTAAGTTTGAAGATCTTATCACAAGGTACCAAAATAAGCGTGGCTTTTCAGGGCTTTTCAAGAATTTGGCAGATGAAGAAAAATTGCTGGTGTATAACGACATCATTGTGGCTTCTGGGCGAGGAAGTGTGGTAGCAGACACGTTATCAACGATCTCTGGTGTAGCGGGCATTTTGTTTCTCATCCTCGCAGCTGGAGTAATTGTATGGGACATCTTTACAGCTGAACATGTTCTCCAAACAGCAACAAAAGATGTGATGATGACTGTTGCAACAGTGGGTGGGGCAATGGTTGGACAAGTTGTGGGAGCTGCTTTGCCAACTTTAGCTGGTGTTGAAGCTTCTGCTCTATTTTTGATGGCCACTGCAGTCATAGGTAGCATTGTCGGAGCTTTTGTAGTAGGTGCCTTTGTTGGTTGGTTGGTTGATCATATCTTTAGCTCCGGAGGGCATTATTCCCACGAAACTGATAGCCACACTTGCTATGTCGCCCCATTGCCTGATGGTGAGGCCATCGCACGTCAAATTGTTCACCAGTAG

Protein sequence

MAPLLLLQGDELRKLARIVRNQEVEILGNLNFPSEQEQAKYLRNVGDNYHATLKLLDDADGVKQMFKDDETKSSIAHESYSYVEKAVNISLQAVRNYALRTNYLSKIDAHSKDIFEALKTLDPENVTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLKDSGTKFEDLITRYQNKRGFSGLFKNLADEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILAAGVIVWDIFTAEHVLQTATKDVMMTVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGSIVGAFVVGAFVGWLVDHIFSSGGHYSHETDSHTCYVAPLPDGEAIARQIVHQ

Homology

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BLAST of CsaV3_1G044120.1 vs. NCBI nr
Match: XP_004139155.1 (PREDICTED: uncharacterized protein LOC101203466 [Cucumis sativus] >KGN66627.1 hypothetical protein Csa_1G650630 [Cucumis sativus])

HSP 1 Score: 657.1 bits (1694), Expect = 3.2e-185
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MAPLLLLQGDELRKLARIVRNQEVEILGNLNFPSEQEQAKYLRNVGDNYHATLKLLDDAD 60
           MAPLLLLQGDELRKLARIVRNQEVEILGNLNFPSEQEQAKYLRNVGDNYHATLKLLDDAD
Sbjct: 1   MAPLLLLQGDELRKLARIVRNQEVEILGNLNFPSEQEQAKYLRNVGDNYHATLKLLDDAD 60

Query: 61  GVKQMFKDDETKSSIAHESYSYVEKAVNISLQAVRNYALRTNYLSKIDAHSKDIFEALKT 120
           GVKQMFKDDETKSSIAHESYSYVEKAVNISLQAVRNYALRTNYLSKIDAHSKDIFEALKT
Sbjct: 61  GVKQMFKDDETKSSIAHESYSYVEKAVNISLQAVRNYALRTNYLSKIDAHSKDIFEALKT 120

Query: 121 LDPENVTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLKDSGTKFEDLITRYQNKR 180
           LDPENVTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLKDSGTKFEDLITRYQNKR
Sbjct: 121 LDPENVTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLKDSGTKFEDLITRYQNKR 180

Query: 181 GFSGLFKNLADEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILAAGVIVWDIFT 240
           GFSGLFKNLADEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILAAGVIVWDIFT
Sbjct: 181 GFSGLFKNLADEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILAAGVIVWDIFT 240

Query: 241 AEHVLQTATKDVMMTVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGSIVGAFVV 300
           AEHVLQTATKDVMMTVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGSIVGAFVV
Sbjct: 241 AEHVLQTATKDVMMTVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGSIVGAFVV 300

Query: 301 GAFVGWLVDHIFSSGGHYSHETDSHTCYVAPLPDGEAIARQIVHQ 346
           GAFVGWLVDHIFSSGGHYSHETDSHTCYVAPLPDGEAIARQIVHQ
Sbjct: 301 GAFVGWLVDHIFSSGGHYSHETDSHTCYVAPLPDGEAIARQIVHQ 345

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BLAST of CsaV3_1G044120.1 vs. NCBI nr
Match: XP_008443644.1 (PREDICTED: uncharacterized protein LOC103487192 [Cucumis melo])

HSP 1 Score: 627.9 bits (1618), Expect = 2.1e-176
Identity = 326/345 (94.49%), Postives = 336/345 (97.39%), Query Frame = 0


Query: 1   MAPLLLLQGDELRKLARIVRNQEVEILGNLNFPSEQEQAKYLRNVGDNYHATLKLLDDAD 60
           MAPLLLLQGDELRKLA +VRNQEV+ILGNL F SEQEQAKYLRNVGDNYHATLKLLDDAD
Sbjct: 1   MAPLLLLQGDELRKLAILVRNQEVDILGNLTFQSEQEQAKYLRNVGDNYHATLKLLDDAD 60

Query: 61  GVKQMFKDDETKSSIAHESYSYVEKAVNISLQAVRNYALRTNYLSKIDAHSKDIFEALKT 120
           G+KQMFKDDETKSSIAHE+YSYVEKAVNISLQAVRNYALRTNYLSKI AHSKDIFEALKT
Sbjct: 61  GIKQMFKDDETKSSIAHETYSYVEKAVNISLQAVRNYALRTNYLSKIGAHSKDIFEALKT 120

Query: 121 LDPENVTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLKDSGTKFEDLITRYQNKR 180
           LDPENVTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLK+SGTKFEDL+TRYQNKR
Sbjct: 121 LDPENVTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLKESGTKFEDLVTRYQNKR 180

Query: 181 GFSGLFKNLADEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILAAGVIVWDIFT 240
           GFSGLFKNL DEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILA GVIVWDIFT
Sbjct: 181 GFSGLFKNLTDEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILATGVIVWDIFT 240

Query: 241 AEHVLQTATKDVMMTVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGSIVGAFVV 300
           +EHVLQT TKDVM+TVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGS+VGAFVV
Sbjct: 241 SEHVLQTVTKDVMVTVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGSVVGAFVV 300

Query: 301 GAFVGWLVDHIFSSGGHYSHETDSHTCYVAPLPDGEAIARQIVHQ 346
           GAFVGWLVDHIFSSGGHY H TD+HTCYVAPLPDGEAIARQIVHQ
Sbjct: 301 GAFVGWLVDHIFSSGGHYPHNTDNHTCYVAPLPDGEAIARQIVHQ 345

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BLAST of CsaV3_1G044120.1 vs. NCBI nr
Match: XP_022157066.1 (uncharacterized protein LOC111023876 [Momordica charantia])

HSP 1 Score: 421.0 bits (1081), Expect = 3.9e-114
Identity = 215/345 (62.32%), Postives = 276/345 (80.00%), Query Frame = 0


Query: 1   MAPLLLLQGDELRKLARIVRNQEVEILGNLNFPSEQEQAKYLRNVGDNYHATLKLLDDAD 60
           MAPLL+L+G++L+KLAR+VRNQE+E + N+ F SE++ AKY R+V +NY+  +KLLDDAD
Sbjct: 1   MAPLLVLEGEKLQKLARLVRNQEIESVHNIVFKSEEDLAKYERDVSENYNKAIKLLDDAD 60

Query: 61  GVKQMFKDDETKSSIAHESYSYVEKAVNISLQAVRNYALRTNYLSKIDAHSKDIFEALKT 120
            +   F++DET+SSIAH+ YSYV+KAVN SLQAVRNY LR +YL KI  HSK++FEAL  
Sbjct: 61  AMMVDFQNDETRSSIAHDVYSYVQKAVNSSLQAVRNYTLRKSYLEKISDHSKELFEALAN 120

Query: 121 LDPENVTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLKDSGTKFEDLITRYQNKR 180
           LDP ++  V RLA+EA QYN+++++ +  HQS AS NFS+ LK  GT FE+L+ RY+NKR
Sbjct: 121 LDPTDIPEVGRLAEEAAQYNKALEEFLAKHQSKASINFSQLLKQEGTTFEELVNRYKNKR 180

Query: 181 GFSGLFKNLADEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILAAGVIVWDIFT 240
           G  GLF++L DEEKL VYNDII ASGRG V+ +     +  AG+  LILAAGV++WDIFT
Sbjct: 181 GLPGLFEDLEDEEKLAVYNDIIEASGRGRVI-EIKEIATTAAGVAVLILAAGVMIWDIFT 240

Query: 241 AEHVLQTATKDVMMTVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGSIVGAFVV 300
           + H L+TAT+D MM VA++GGA+VG+VV AALP+L G+EAS+LF+MATA++ S VGAFV+
Sbjct: 241 SAHPLETATRDAMMNVASIGGALVGEVVEAALPSLLGIEASSLFVMATAIVTSFVGAFVI 300

Query: 301 GAFVGWLVDHIFSSGGHYSHETDSHTCYVAPLPDGEAIARQIVHQ 346
           G FVGWL+D IFSSGG Y H TD H CYVAPLPDGEA+ARQI HQ
Sbjct: 301 GEFVGWLIDIIFSSGGTYPHSTDGHICYVAPLPDGEALARQISHQ 344

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BLAST of CsaV3_1G044120.1 vs. NCBI nr
Match: XP_009378339.1 (PREDICTED: uncharacterized protein LOC103966850 [Pyrus x bretschneideri])

HSP 1 Score: 265.8 bits (678), Expect = 2.1e-67
Identity = 145/338 (42.90%), Postives = 216/338 (63.91%), Query Frame = 0


Query: 10  DELRKLARIVRNQEVEILGNLNFPSEQEQAKYLRNVGDNYHATLKLLDDADGVKQMF-KD 69
           ++LRKLARI+  QE E + N+ F  E + AKYLR+    Y + ++LLD    ++  F  D
Sbjct: 15  EQLRKLARIIYYQEAEAIKNIKFEYEAKLAKYLRDCKACYESAIRLLDSGSKLEPWFNND 74

Query: 70  DETKSSIAHESYSYVEKAVNISLQAVRNYALRTNYLSKIDAHSKDIFEALKTLDPENVTN 129
           D  ++SIAH+ Y YV  A N +LQ VRN+ +R +Y++KI+ H     + L+    +++TN
Sbjct: 75  DNDRASIAHDIYGYVVNAANHALQFVRNFRVRMDYVNKIEKH----VDGLRAELDDDLTN 134

Query: 130 VARLAKEANQYNESMQQVMLNHQSPASRNFSKWLKDSGTKFEDLITRYQNKRGFSG-LFK 189
           +  LAK+A+ +   M ++    QSPASR +S+W+K++G  FE+L+ +YQ   G+ G LF+
Sbjct: 135 MEELAKKASTFRNDMLEIARGSQSPASRQYSRWIKETGKSFEELLQKYQTDLGYGGRLFE 194

Query: 190 NLADEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILAAGVIVWDIFTAEHVLQT 249
            L D  K+ V+  II ASGR ++     S + G AGI  LI A G +VWDIF+A++ LQT
Sbjct: 195 ELEDVVKIRVFGKIIFASGRANINVTAYSKMFGAAGIAVLIFATGFMVWDIFSADNPLQT 254

Query: 250 ATKDVMMTVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGSIVGAFVVGAFVGWL 309
           A +D ++T A++GGAM+G+VVG AL ++  V A+AL ++   +   I GAF++G F  WL
Sbjct: 255 AARDAVVTAASIGGAMIGEVVGVALASM--VTANALLVLMAGITAGIAGAFLIGEFATWL 314

Query: 310 VDHIFSSGGHYSHETDSHTCYVAPLPDGEAIARQIVHQ 346
           +D +F SGG     T  H CYVA LPDG  +AR+I HQ
Sbjct: 315 IDVVFGSGGSAPLSTMGHRCYVAHLPDGSVLARRIAHQ 346

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BLAST of CsaV3_1G044120.1 vs. NCBI nr
Match: XP_008392236.1 (PREDICTED: uncharacterized protein LOC103454422 [Malus domestica])

HSP 1 Score: 258.5 bits (659), Expect = 3.3e-65
Identity = 143/341 (41.94%), Postives = 215/341 (63.05%), Query Frame = 0


Query: 7   LQGDELRKLARIVRNQEVEILGNLNFPSEQEQAKYLRNVGDNYHATLKLLDDADGVKQMF 66
           L  ++LRKLARI+  QE E + N+ F  E + AKYL++    Y + ++LLD A  ++  F
Sbjct: 12  LSPEQLRKLARILYYQEAEAIKNIQFEYEAKLAKYLQDSKACYESAIRLLDSATTLEPWF 71

Query: 67  -KDDETKSSIAHESYSYVEKAVNISLQAVRNYALRTNYLSKIDAHSKDIFEALKTLDPEN 126
              D+ ++SIAH+ Y Y+E A N ++Q V+N+ +R +Y++KI  H  ++   L     + 
Sbjct: 72  DHGDKVRASIAHDIYGYIENAANHAIQFVKNFYVRMDYVNKIKKHVNELSGKL----DDQ 131

Query: 127 VTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLKDSGTKFEDLITRYQNKRGFS-G 186
           VTN+  LAKEA+++     ++    QSPASR +S+W+K++G  FE+L+ +YQ + G+   
Sbjct: 132 VTNMEELAKEAHKFRNDSLEIARGSQSPASRQYSRWIKETGKTFEELVQKYQTELGYGRR 191

Query: 187 LFKNLADEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILAAGVIVWDIFTAEHV 246
            F +L D EK+ VY  II  SGR ++     S I G AGI  LILAAG++VWDI++A++ 
Sbjct: 192 RFADLEDFEKIKVYGTIISKSGRANIDVTAYSKIFGAAGIAVLILAAGILVWDIYSADNP 251

Query: 247 LQTATKDVMMTVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGSIVGAFVVGAFV 306
           LQTA +D + T A +GGAM+G+VVG AL ++  V  +AL ++   +   I GAF++G F 
Sbjct: 252 LQTAARDAVTTAAAIGGAMIGEVVGVALASM--VTGNALLVLMAGITAGIAGAFLIGEFA 311

Query: 307 GWLVDHIFSSGGHYSHETDSHTCYVAPLPDGEAIARQIVHQ 346
            WL++ IF SGG     T  H CYV  LP+G  +ARQI HQ
Sbjct: 312 IWLINVIFGSGGSAPLSTMGHRCYVTQLPEGSVLARQIAHQ 346

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BLAST of CsaV3_1G044120.1 vs. TrEMBL
Match: tr|A0A0A0M0G8|A0A0A0M0G8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G650630 PE=4 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 2.1e-185
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MAPLLLLQGDELRKLARIVRNQEVEILGNLNFPSEQEQAKYLRNVGDNYHATLKLLDDAD 60
           MAPLLLLQGDELRKLARIVRNQEVEILGNLNFPSEQEQAKYLRNVGDNYHATLKLLDDAD
Sbjct: 1   MAPLLLLQGDELRKLARIVRNQEVEILGNLNFPSEQEQAKYLRNVGDNYHATLKLLDDAD 60

Query: 61  GVKQMFKDDETKSSIAHESYSYVEKAVNISLQAVRNYALRTNYLSKIDAHSKDIFEALKT 120
           GVKQMFKDDETKSSIAHESYSYVEKAVNISLQAVRNYALRTNYLSKIDAHSKDIFEALKT
Sbjct: 61  GVKQMFKDDETKSSIAHESYSYVEKAVNISLQAVRNYALRTNYLSKIDAHSKDIFEALKT 120

Query: 121 LDPENVTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLKDSGTKFEDLITRYQNKR 180
           LDPENVTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLKDSGTKFEDLITRYQNKR
Sbjct: 121 LDPENVTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLKDSGTKFEDLITRYQNKR 180

Query: 181 GFSGLFKNLADEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILAAGVIVWDIFT 240
           GFSGLFKNLADEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILAAGVIVWDIFT
Sbjct: 181 GFSGLFKNLADEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILAAGVIVWDIFT 240

Query: 241 AEHVLQTATKDVMMTVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGSIVGAFVV 300
           AEHVLQTATKDVMMTVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGSIVGAFVV
Sbjct: 241 AEHVLQTATKDVMMTVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGSIVGAFVV 300

Query: 301 GAFVGWLVDHIFSSGGHYSHETDSHTCYVAPLPDGEAIARQIVHQ 346
           GAFVGWLVDHIFSSGGHYSHETDSHTCYVAPLPDGEAIARQIVHQ
Sbjct: 301 GAFVGWLVDHIFSSGGHYSHETDSHTCYVAPLPDGEAIARQIVHQ 345

[Close]

BLAST of CsaV3_1G044120.1 vs. TrEMBL
Match: tr|A0A1S3B9A9|A0A1S3B9A9_CUCME (uncharacterized protein LOC103487192 OS=Cucumis melo OX=3656 GN=LOC103487192 PE=4 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 1.4e-176
Identity = 326/345 (94.49%), Postives = 336/345 (97.39%), Query Frame = 0


Query: 1   MAPLLLLQGDELRKLARIVRNQEVEILGNLNFPSEQEQAKYLRNVGDNYHATLKLLDDAD 60
           MAPLLLLQGDELRKLA +VRNQEV+ILGNL F SEQEQAKYLRNVGDNYHATLKLLDDAD
Sbjct: 1   MAPLLLLQGDELRKLAILVRNQEVDILGNLTFQSEQEQAKYLRNVGDNYHATLKLLDDAD 60

Query: 61  GVKQMFKDDETKSSIAHESYSYVEKAVNISLQAVRNYALRTNYLSKIDAHSKDIFEALKT 120
           G+KQMFKDDETKSSIAHE+YSYVEKAVNISLQAVRNYALRTNYLSKI AHSKDIFEALKT
Sbjct: 61  GIKQMFKDDETKSSIAHETYSYVEKAVNISLQAVRNYALRTNYLSKIGAHSKDIFEALKT 120

Query: 121 LDPENVTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLKDSGTKFEDLITRYQNKR 180
           LDPENVTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLK+SGTKFEDL+TRYQNKR
Sbjct: 121 LDPENVTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLKESGTKFEDLVTRYQNKR 180

Query: 181 GFSGLFKNLADEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILAAGVIVWDIFT 240
           GFSGLFKNL DEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILA GVIVWDIFT
Sbjct: 181 GFSGLFKNLTDEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILATGVIVWDIFT 240

Query: 241 AEHVLQTATKDVMMTVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGSIVGAFVV 300
           +EHVLQT TKDVM+TVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGS+VGAFVV
Sbjct: 241 SEHVLQTVTKDVMVTVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGSVVGAFVV 300

Query: 301 GAFVGWLVDHIFSSGGHYSHETDSHTCYVAPLPDGEAIARQIVHQ 346
           GAFVGWLVDHIFSSGGHY H TD+HTCYVAPLPDGEAIARQIVHQ
Sbjct: 301 GAFVGWLVDHIFSSGGHYPHNTDNHTCYVAPLPDGEAIARQIVHQ 345

[Close]

BLAST of CsaV3_1G044120.1 vs. TrEMBL
Match: tr|A0A1Q3C5B1|A0A1Q3C5B1_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_18757 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 8.4e-57
Identity = 131/350 (37.43%), Postives = 207/350 (59.14%), Query Frame = 0


Query: 1   MAPLLLLQGDELRKLARIVRNQEVEILGNLNFPSEQEQAKYLRNVGDNYHATLKLLDDAD 60
           MA +++L   +LR+LA+++R QE +++ N+ F SE +Q  YL +   NY+  +++LD  +
Sbjct: 1   MAGMIILNDAQLRRLAKLIRKQEEQLIYNIKFESENDQGTYLNDCRANYNTAMEILDSGN 60

Query: 61  GVKQMFKDDETKSSIAHESYSYVEKAVNISLQAVRNYALRTNYLSKIDAHSKDIFEALKT 120
            + + F DD  +SSIAH+ YS +E ++N + Q VRNY LR +YL KI   S    + +KT
Sbjct: 61  KLVKEFNDDTARSSIAHDIYSTIEGSLNSAFQWVRNYTLRKSYLQKIKKFSTGAIDIVKT 120

Query: 121 LDPENVTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLKDSGTK--FEDLITRYQN 180
           LDP++      LA+ A+ Y ++M ++     S  S+  +      G +   + LI R Q 
Sbjct: 121 LDPKDTAFAKDLAQAADDYKKAMWELNKKCMSARSQAVANMFDQMGKRATMDALIERAQK 180

Query: 181 KRGFSGLFKNLADEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILAAGVIVWDI 240
           K   SG F  L+D++K+ VY  ++  SG   +V++ ++ I G AG+  L+  AG++VWDI
Sbjct: 181 KLNLSGSFDKLSDKDKIRVYEKVMDISGEEKLVSNAITKIFGAAGVALLLFTAGMMVWDI 240

Query: 241 FTAEHVLQTATKDVMMTVATVGGAMVGQVVGA-ALPTLAGVE--ASALFLMATAVIGSIV 300
           +T++H ++TAT D ++  A+  GA VG+ +G  A   L G E  A+A  +    +  S  
Sbjct: 241 YTSDHKIRTATHDAVVAAASFAGAWVGEFIGTIAASALVGTETFAAAAIVAVAGLAFSFA 300

Query: 301 GAFVVGAFVGWLVDHIFSSG-GHYSHETDSHTCYVAPLPDGEAIARQIVH 345
           GA ++G F GWL+D I SSG  +    TD   CYVAP+PDG A+A QI H
Sbjct: 301 GAVILGLFAGWLIDSILSSGPSNKPLSTDGLRCYVAPMPDGVALAHQIAH 350

[Close]

BLAST of CsaV3_1G044120.1 vs. TrEMBL
Match: tr|A0A1Q3DCX1|A0A1Q3DCX1_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_33720 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 4.3e-53
Identity = 129/350 (36.86%), Postives = 201/350 (57.43%), Query Frame = 0


Query: 1   MAPLLLLQGDELRKLARIVRNQEVEILGNLNFPSEQEQAKYLRNVGDNYHATLKLLDDAD 60
           MA ++LL   +LR+LA +VR QE E +  + F SE +Q+ YLR    NY + +++LD  +
Sbjct: 1   MAGMILLNDAQLRRLASLVRKQEEENIYYIKFESENDQSSYLRECKANYTSAIEMLDAGN 60

Query: 61  GVKQMFKDDETKSSIAHESYSYVEKAVNISLQAVRNYALRTNYLSKIDAHSKDIFEALKT 120
            + + +  D  ++SIAH+ YS +E ++N + Q VRNY LR +YL KI   S    + +KT
Sbjct: 61  NLVEEYSSDPARASIAHDIYSTIEGSLNSAYQWVRNYTLRKSYLEKIKGFSDSAMDIVKT 120

Query: 121 LDPENVTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLKDSGTK--FEDLITRYQN 180
           LDP +      LA+ A+ Y ++M ++     S  S   +      G+K   + LI R Q 
Sbjct: 121 LDPADTDFAKELAQAADDYKKAMWELNKKCMSSRSEAVATMFDQMGSKATMDTLIERAQQ 180

Query: 181 KRGFSGLFKNLADEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILAAGVIVWDI 240
           K    G F +L+DE+K+ VY  ++  SG   +V++ +S I G AGI  L+ AAG++VWDI
Sbjct: 181 KLNLKGSFDDLSDEDKIRVYEKVMDISGEEKLVSNAISKIMGAAGIAVLLFAAGMMVWDI 240

Query: 241 FTAEHVLQTATKDVMMTVATVGGAMVGQVVGAALPT---LAGVEASALFLMATAVIGSIV 300
           +T++H ++TAT D ++  A+  GA  G+ +G  + +    A   A+A  +    +  S  
Sbjct: 241 YTSDHKIRTATHDAVVAAASFAGAWAGEFIGTVVASELVEAETFAAATIVAVAGLAFSFA 300

Query: 301 GAFVVGAFVGWLVDHIFSS-GGHYSHETDSHTCYVAPLPDGEAIARQIVH 345
           GA ++G F GWL+D I SS   +    TD   CYVAP+PDG A+A QI +
Sbjct: 301 GAVILGLFAGWLIDSILSSKPSNKPLSTDGLLCYVAPMPDGVALAHQIAN 350

[Close]

BLAST of CsaV3_1G044120.1 vs. TrEMBL
Match: tr|A0A1Q3D1J0|A0A1Q3D1J0_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_29778 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.8e-52
Identity = 132/349 (37.82%), Postives = 198/349 (56.73%), Query Frame = 0


Query: 1   MAPLLLLQGDELRKLARIVRNQEVEILGNLNFPSEQEQAKYLRNVGDNYHATLKLLDDAD 60
           MA ++LL G +L +LA +VR QE   +  + F SE +QA YLR    NY   +++LD  D
Sbjct: 1   MAGMILLNGPQLGRLASLVRKQEEANIFYIKFESENDQAAYLRECKANYTTAMEILDAGD 60

Query: 61  GVKQMFKDDETKSSIAHESYSYVEKAVNISLQAVRNYALRTNYLSKIDAHSKDIFEALKT 120
            + + FK+D  + SIAH+ YS +E ++N + Q VRNY LR +YL KI + S    + +KT
Sbjct: 61  NLVKEFKNDPARDSIAHDIYSTIEGSLNSAFQWVRNYTLRMSYLQKIKSFSTGAIDIVKT 120

Query: 121 LDPENVTNVARLAKEANQYNESMQQVMLNHQSPASRNFSKWLKDSGTK--FEDLITRYQN 180
           LD  +   V  LAK  + Y ++M ++     S  +   +      G++   + LI R Q 
Sbjct: 121 LDTSDTEFVRDLAKATDDYKKAMWELNKKCMSSRTEAVANMFDQMGSRATMDTLIERAQE 180

Query: 181 KRGFSGLFKNLADEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILAAGVIVWDI 240
           K    G F  L +E+K+ VY  ++  SG   +V++ +S I G AGI  L+ AAG++VWDI
Sbjct: 181 KLKLRGSFDKLNEEDKIRVYEKVMDISGEEKLVSNAISKIFGAAGIAVLLFAAGMMVWDI 240

Query: 241 FTAEHVLQTATKDVMMTVATVGGAMVGQVVGAALPT-LAGVE--ASALFLMATAVIGSIV 300
           +T++H ++TAT D ++  A+  GA  G+ +G  + T L G E  A+A  +    +  S  
Sbjct: 241 YTSDHPIRTATHDGVVAAASFAGAWAGEFIGTVVATELVGAETFAAATVVAVAGLAFSFA 300

Query: 301 GAFVVGAFVGWLVDHIFSS--GGHYSHETDSHTCYVAPLPDGEAIARQI 343
           GA ++G F GWL+D I SS         TD   CYVAP+PDG A+A QI
Sbjct: 301 GAVILGLFAGWLIDSILSSKPSNDKPLSTDGLRCYVAPMPDGVALAHQI 349

The following BLAST results are available for this feature:

BLAST of CsaV3_1G044120.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139155.1	3.2e-185	100.00	PREDICTED: uncharacterized protein LOC101203466 [Cucumis sativus] >KGN66627.1 hy...	[more]
XP_008443644.1	2.1e-176	94.49	PREDICTED: uncharacterized protein LOC103487192 [Cucumis melo]	[more]
XP_022157066.1	3.9e-114	62.32	uncharacterized protein LOC111023876 [Momordica charantia]	[more]
XP_009378339.1	2.1e-67	42.90	PREDICTED: uncharacterized protein LOC103966850 [Pyrus x bretschneideri]	[more]
XP_008392236.1	3.3e-65	41.94	PREDICTED: uncharacterized protein LOC103454422 [Malus domestica]	[more]

BLAST of CsaV3_1G044120.1 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G044120.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G044120.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0M0G8\|A0A0A0M0G8_CUCSA	2.1e-185	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G650630 PE=4 SV=1	[more]
tr\|A0A1S3B9A9\|A0A1S3B9A9_CUCME	1.4e-176	94.49	uncharacterized protein LOC103487192 OS=Cucumis melo OX=3656 GN=LOC103487192 PE=...	[more]
tr\|A0A1Q3C5B1\|A0A1Q3C5B1_CEPFO	8.4e-57	37.43	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_18757 PE=4...	[more]
tr\|A0A1Q3DCX1\|A0A1Q3DCX1_CEPFO	4.3e-53	36.86	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_33720 PE=4...	[more]
tr\|A0A1Q3D1J0\|A0A1Q3D1J0_CEPFO	2.8e-52	37.82	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_29778 PE=4...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_1G044120	CsaV3_1G044120	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_1G044120.1	CsaV3_1G044120.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_1G044120.1.cds3	CsaV3_1G044120.1.cds3	CDS
CsaV3_1G044120.1.cds2	CsaV3_1G044120.1.cds2	CDS
CsaV3_1G044120.1.cds1	CsaV3_1G044120.1.cds1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_1G044120.1.exon3	CsaV3_1G044120.1.exon3	exon
CsaV3_1G044120.1.exon2	CsaV3_1G044120.1.exon2	exon
CsaV3_1G044120.1.exon1	CsaV3_1G044120.1.exon1	exon

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 129..149