CsaV3_1G043730.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAAGGGATCTGAAGAGGTATTAACAAGTGATCACCATGGTTGCTTCAAAGGCAAAGCTTGTAACGTGGAAGAAAAAGTGGTTGAATTAGTAAACAATACAAAGAAGGTGGGCAAAGACGACCCGAGAAGAATAGTTCACTCTTTAAAGCTTGGATTAGCTGCCACAATGGTGTCATCATTTTACTATTTCGAACCTCTCTACGATAGCTTCGGCGCATCTTCGATATGGGCCATCATCACCGTTATTGTCGTCTTCGAGTTTTCTGTTGGTAAGTTAGCATATAATGCACACAGTTGTTCAATCTTCATTTTGTTGAGAGTTTTGGTTCAGAGGACTATGAAGGCCTCCCAAGGCATACTAGTAGTCTTCTATGATTCTTCCTCTTTACCTTTGCCTTTTTCTTCCTTGAACTGCTTTCCCATTATTTTCTCCTCTGATTCCTTTGTTTTCTTCCTATATTCTAGAACTCTACTAAAAGGTGGGGGAAAAAAAGGCTGAATTTCTAAATTTTCAAAAAAATTTAAGTAGTTCAATTACTTTTTCAACTTTAAAATAAATTTATTATAGAACATTACTAATCCCAACCATTCTGCTTTTGCTATCTACTTTCTACCAATATTTTAAAATAATGACTTCTATAACTTGTTATGTTATAAAAATTTGTTAATATTTGAAGTGTTTACTTGAAAATTTCATGTCCCTTCCAAAGAAACGATGAGCAAATACGGAAAAATTTGAAATAGTTAGTGCATAGAAATTTACAGTTTTCAAAATTATATTTGCATAGTGTTTTGTTTTAGAAAAATGACATCCATACATAGAAGCCGATCGACAAAGAAAGCAACAAGTCAAAAGAATAACATCCAAAATCCATCTCAAATAGTTAGAAGTCCAACTATATCGATCGAATGTCTTTCAAAATAGAAGAATTACATAATCAACCAAATTTAAAATCCACCTACATATAAATATTCGATGTTTCAATATTTCAATATTTATCCAACACTTTTCATCTTCTTCTCCACCTACAAGGTTTTGAACCCATAACTTAAGCAGTTGGATCAAATTTCAATCCAAACTCTTAAACTATGCTACGAAACGGTTGGGTATATATTTATACAACAGTTATACTATATATATATATATATATAGTATATGTATGTATAATAAATATGTCATGTTTTGGGAATTTAATAAGTATATATCATTAACCAGTGAATTTTAGTTTACACATTGTAGTCCTATAATATAATTTAAAATCCAAGGTCTTATTAATTATTTTTTTTATTGAAACAAATATTATAAAATGCTAGTATAGAAACACAACCCATGACTTAATTGATCTATAAAGTATTGGTCGACTCTTCGGAAAAGTAAATATGTAGGGAGATTAAATAGAAATTAATATGGACAAAAGCAAAGAGTGAGGAAATATATATATAATTTATAAACATGTTTTTCTTTTTTTTGAAAAGGAAAACATACTTTTTTTAGTTATTCTACCTACAATTTTATCATTTATTACCTACATGCTAAGAACTATGTCAACTTTTAAAATTTTAATAACTAAAAGCAACATGTTTAAAATATAATTTTTTAATAATTTTGGAAAACAAAGTATAGTTAATTACTAAACAGATGTTACATCCCACGTATTGATGGGTTGTTTTGGAATAAACAGGAGCAACGCTTGGAAAAGGGTTGAATAGAACGACAGCCACGTTAGTAGCGGGAGGTCTAGGATTTGTAGCTCATTACATTGCAAGTATTAGTGGAAAGATTGGACATCCCATATTGCTAGGGATCTTTATATCCATAATGAGTAAGTAATCAATTTATATAATTATACTAATTGTTTCAACCTCAATTAGATTCAACAATTTAAACAAATGAAAAAGTTCAATATATTTACTGTGTTGTTATTCAGGTGGAACAGCAACATATCTTCGATTCTTCCCCAAGTTGAAGGCGAAATATGATTATGGGCTTTTGATATTCATATTGACATTTGATATGGTCGCAGTGTCTGGTTATAGAGATGATGAGATCTTGAAATTGGCTTGGCATAGGATTGCTAACATTCTCATGGGTGGCTTTATTGCTGTGGTTGTTTGTATCTTTGTTAGACCTGTTTGGGCTGGTGCTGATCTTCATCAATTGGTTTCTACCAATATTCGTAACCTTGGGATATTCTTTGAAGGTGAATCTTCATCTTTACTTTAA ATGGTGAAGGGATCTGAAGAGGTATTAACAAGTGATCACCATGGTTGCTTCAAAGGCAAAGCTTGTAACGTGGAAGAAAAAGTGGTTGAATTAGTAAACAATACAAAGAAGGTGGGCAAAGACGACCCGAGAAGAATAGTTCACTCTTTAAAGCTTGGATTAGCTGCCACAATGGTGTCATCATTTTACTATTTCGAACCTCTCTACGATAGCTTCGGCGCATCTTCGATATGGGCCATCATCACCGTTATTGTCGTCTTCGAGTTTTCTGTTGGAGCAACGCTTGGAAAAGGGTTGAATAGAACGACAGCCACGTTAGTAGCGGGAGGTCTAGGATTTGTAGCTCATTACATTGCAAGTATTAGTGGAAAGATTGGACATCCCATATTGCTAGGGATCTTTATATCCATAATGAGTGGAACAGCAACATATCTTCGATTCTTCCCCAAGTTGAAGGCGAAATATGATTATGGGCTTTTGATATTCATATTGACATTTGATATGGTCGCAGTGTCTGGTTATAGAGATGATGAGATCTTGAAATTGGCTTGGCATAGGATTGCTAACATTCTCATGGGTGGCTTTATTGCTGTGGTTGTTTGTATCTTTGTTAGACCTGTTTGGGCTGGTGCTGATCTTCATCAATTGGTTTCTACCAATATTCGTAACCTTGGGATATTCTTTGAAGGTGAATCTTCATCTTTACTTTAA ATGGTGAAGGGATCTGAAGAGGTATTAACAAGTGATCACCATGGTTGCTTCAAAGGCAAAGCTTGTAACGTGGAAGAAAAAGTGGTTGAATTAGTAAACAATACAAAGAAGGTGGGCAAAGACGACCCGAGAAGAATAGTTCACTCTTTAAAGCTTGGATTAGCTGCCACAATGGTGTCATCATTTTACTATTTCGAACCTCTCTACGATAGCTTCGGCGCATCTTCGATATGGGCCATCATCACCGTTATTGTCGTCTTCGAGTTTTCTGTTGGAGCAACGCTTGGAAAAGGGTTGAATAGAACGACAGCCACGTTAGTAGCGGGAGGTCTAGGATTTGTAGCTCATTACATTGCAAGTATTAGTGGAAAGATTGGACATCCCATATTGCTAGGGATCTTTATATCCATAATGAGTGGAACAGCAACATATCTTCGATTCTTCCCCAAGTTGAAGGCGAAATATGATTATGGGCTTTTGATATTCATATTGACATTTGATATGGTCGCAGTGTCTGGTTATAGAGATGATGAGATCTTGAAATTGGCTTGGCATAGGATTGCTAACATTCTCATGGGTGGCTTTATTGCTGTGGTTGTTTGTATCTTTGTTAGACCTGTTTGGGCTGGTGCTGATCTTCATCAATTGGTTTCTACCAATATTCGTAACCTTGGGATATTCTTTGAAGGTGAATCTTCATCTTTACTTTAA MVKGSEEVLTSDHHGCFKGKACNVEEKVVELVNNTKKVGKDDPRRIVHSLKLGLAATMVSSFYYFEPLYDSFGASSIWAIITVIVVFEFSVGATLGKGLNRTTATLVAGGLGFVAHYIASISGKIGHPILLGIFISIMSGTATYLRFFPKLKAKYDYGLLIFILTFDMVAVSGYRDDEILKLAWHRIANILMGGFIAVVVCIFVRPVWAGADLHQLVSTNIRNLGIFFEGESSSLL
BLAST of CsaV3_1G043730.1 vs. NCBI nr
Match: KGN66580.1 (hypothetical protein Csa_1G630840 [Cucumis sativus]) HSP 1 Score: 466.5 bits (1199), Expect = 5.5e-128 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. NCBI nr
Match: XP_004139137.1 (PREDICTED: aluminum-activated malate transporter 2 [Cucumis sativus]) HSP 1 Score: 456.8 bits (1174), Expect = 4.4e-125 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. NCBI nr
Match: XP_023003150.1 (aluminum-activated malate transporter 2-like [Cucurbita maxima]) HSP 1 Score: 357.8 bits (917), Expect = 2.8e-95 Identity = 175/230 (76.09%), Postives = 197/230 (85.65%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. NCBI nr
Match: XP_023530353.1 (aluminum-activated malate transporter 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 357.8 bits (917), Expect = 2.8e-95 Identity = 175/230 (76.09%), Postives = 197/230 (85.65%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. NCBI nr
Match: XP_022153250.1 (aluminum-activated malate transporter 2-like [Momordica charantia]) HSP 1 Score: 331.6 bits (849), Expect = 2.1e-87 Identity = 164/224 (73.21%), Postives = 185/224 (82.59%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. TAIR10
Match: AT1G08440.1 (Aluminium activated malate transporter family protein) HSP 1 Score: 259.6 bits (662), Expect = 1.9e-69 Identity = 120/204 (58.82%), Postives = 166/204 (81.37%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. TAIR10
Match: AT2G27240.1 (Aluminium activated malate transporter family protein) HSP 1 Score: 258.8 bits (660), Expect = 3.2e-69 Identity = 117/207 (56.52%), Postives = 163/207 (78.74%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. TAIR10
Match: AT3G11680.1 (Aluminium activated malate transporter family protein) HSP 1 Score: 236.1 bits (601), Expect = 2.2e-62 Identity = 113/207 (54.59%), Postives = 152/207 (73.43%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. TAIR10
Match: AT1G08430.1 (aluminum-activated malate transporter 1) HSP 1 Score: 226.5 bits (576), Expect = 1.7e-59 Identity = 109/207 (52.66%), Postives = 155/207 (74.88%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. TAIR10
Match: AT5G46610.1 (Aluminium activated malate transporter family protein) HSP 1 Score: 198.0 bits (502), Expect = 6.7e-51 Identity = 97/212 (45.75%), Postives = 138/212 (65.09%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. Swiss-Prot
Match: sp|Q9SJE8|ALMT2_ARATH (Aluminum-activated malate transporter 2 OS=Arabidopsis thaliana OX=3702 GN=ALMT2 PE=2 SV=2) HSP 1 Score: 259.6 bits (662), Expect = 3.4e-68 Identity = 120/204 (58.82%), Postives = 166/204 (81.37%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. Swiss-Prot
Match: sp|Q9XIN1|ALMT7_ARATH (Aluminum-activated malate transporter 7 OS=Arabidopsis thaliana OX=3702 GN=ALMT7 PE=3 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 5.7e-68 Identity = 117/207 (56.52%), Postives = 163/207 (78.74%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. Swiss-Prot
Match: sp|Q9SRM9|ALMT8_ARATH (Aluminum-activated malate transporter 8 OS=Arabidopsis thaliana OX=3702 GN=ALMT8 PE=3 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 4.0e-61 Identity = 113/207 (54.59%), Postives = 152/207 (73.43%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. Swiss-Prot
Match: sp|Q9SJE9|ALMT1_ARATH (Aluminum-activated malate transporter 1 OS=Arabidopsis thaliana OX=3702 GN=ALMT1 PE=1 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 3.1e-58 Identity = 109/207 (52.66%), Postives = 155/207 (74.88%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. Swiss-Prot
Match: sp|Q76LB1|ALMT1_WHEAT (Aluminum-activated malate transporter 1 OS=Triticum aestivum OX=4565 GN=ALMT1 PE=1 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 1.9e-50 Identity = 101/201 (50.25%), Postives = 141/201 (70.15%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. TrEMBL
Match: tr|A0A0A0LXK8|A0A0A0LXK8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G630840 PE=4 SV=1) HSP 1 Score: 466.5 bits (1199), Expect = 3.7e-128 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. TrEMBL
Match: tr|V4SJW4|V4SJW4_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10028411mg PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 7.5e-73 Identity = 134/229 (58.52%), Postives = 175/229 (76.42%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. TrEMBL
Match: tr|A0A067F4Z2|A0A067F4Z2_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g042529mg PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 7.5e-73 Identity = 134/229 (58.52%), Postives = 175/229 (76.42%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. TrEMBL
Match: tr|A0A2H5QDW3|A0A2H5QDW3_CITUN (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_220530 PE=4 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 1.3e-72 Identity = 133/229 (58.08%), Postives = 175/229 (76.42%), Query Frame = 0
BLAST of CsaV3_1G043730.1 vs. TrEMBL
Match: tr|A0A2P6QEL5|A0A2P6QEL5_ROSCH (Putative aluminum-activated malate transporter OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0048481 PE=4 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 2.8e-72 Identity = 134/204 (65.69%), Postives = 169/204 (82.84%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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