Csa7G432230.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa7G432230.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 17133540 .. 17133833 (+)
Sequence length294
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGATAAGGGAGTTGCAAAAGAACCAGGAGTCAGTTGGATTCAGATGAAGTGCAGGGTACACTACTTTCTTACCAAGGACGATTGTCATGACAAGATTGAAGGTGATTCATTCATGCTTGAAGGAGTTGTTAAAACATCTCACCATGGCAGGTTATGTCAGATACAAATTTTATGCTCCATAATGTGGAAGAAGATTAAAAACAAAATAAGCTTCTGTACCATTGTGAGAAGCTTGCCGTTGCTTATGGGATCTTGCACACACCAAACAAGATGCCAATTGAAATCATGA

mRNA sequence

ATGAAAGATAAGGGAGTTGCAAAAGAACCAGGAGTCAGTTGGATTCAGATGAAGTGCAGGGTACACTACTTTCTTACCAAGGACGATTGTCATGACAAGATTGAAGGTGATTCATTCATGCTTGAAGGAGTTGTTAAAACATCTCACCATGGCAGGTTATGTCAGATACAAATTTTATGCTCCATAATGTGGAAGAAGATTAAAAACAAAATAAGCTTCTGTACCATTGTGAGAAGCTTGCCGTTGCTTATGGGATCTTGCACACACCAAACAAGATGCCAATTGAAATCATGA

Coding sequence (CDS)

ATGAAAGATAAGGGAGTTGCAAAAGAACCAGGAGTCAGTTGGATTCAGATGAAGTGCAGGGTACACTACTTTCTTACCAAGGACGATTGTCATGACAAGATTGAAGGTGATTCATTCATGCTTGAAGGAGTTGTTAAAACATCTCACCATGGCAGGTTATGTCAGATACAAATTTTATGCTCCATAATGTGGAAGAAGATTAAAAACAAAATAAGCTTCTGTACCATTGTGAGAAGCTTGCCGTTGCTTATGGGATCTTGCACACACCAAACAAGATGCCAATTGAAATCATGA

Protein sequence

MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVKTSHHGRLCQIQILCSIMWKKIKNKISFCTIVRSLPLLMGSCTHQTRCQLKS*
Homology
[Close]
BLAST of Csa7G432230.1 vs. TrEMBL
Match: A0A0A0KA26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432230 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 3.1e-51
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1 

Query: 1  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVKTSHHGRLCQIQILC 60
          MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVKTSHHGRLCQIQILC
Sbjct: 1  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVKTSHHGRLCQIQILC 60

Query: 61 SIMWKKIKNKISFCTIVRSLPLLMGSCTHQTRCQLKS 98
          SIMWKKIKNKISFCTIVRSLPLLMGSCTHQTRCQLKS
Sbjct: 61 SIMWKKIKNKISFCTIVRSLPLLMGSCTHQTRCQLKS 97

[Close]
BLAST of Csa7G432230.1 vs. NCBI nr
Match: gi|700190009|gb|KGN45242.1| (hypothetical protein Csa_7G432230 [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 4.4e-51
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1 

Query: 1  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVKTSHHGRLCQIQILC 60
          MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVKTSHHGRLCQIQILC
Sbjct: 1  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVKTSHHGRLCQIQILC 60

Query: 61 SIMWKKIKNKISFCTIVRSLPLLMGSCTHQTRCQLKS 98
          SIMWKKIKNKISFCTIVRSLPLLMGSCTHQTRCQLKS
Sbjct: 61 SIMWKKIKNKISFCTIVRSLPLLMGSCTHQTRCQLKS 97

The following BLAST results are available for this feature:
BLAST of Csa7G432230.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KA26_CUCSA3.1e-51100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432230 PE=4 SV=1[more]
BLAST of Csa7G432230.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190009|gb|KGN45242.1|4.4e-51100.00hypothetical protein Csa_7G432230 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa7G432230Csa7G432230gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa7G432230.1Csa7G432230.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa7G432230.1.cds1Csa7G432230.1.cds1CDS