Csa7G419640.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G419640.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Autophagy 8h, putative; contains IPR004241 (Autophagy protein Atg8 ubiquitin-like)
Location	Chr7 : 16057303 .. 16059213 (-)
Sequence length	357

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTTAATTAAAATTGAATTTAAAGAAAGCAAAAGGTAGGAAGGATTATCTCTATTTATACGTTCTTCCCATTTGTACGGCAACGCAAAGACAGCGCTAATGGGAAGAACCAAATCCTTCAAGGACGAGTTCACCTTCGGTATGATTGACTTTTTGTGGCTTCAAATTCTACATCATCATCCTAATTTTTCATCAGTTTTTCTCTCCTTTTATATCTATTTTTTGTTTAATTATGGCCTTGATTTTTTCACAGAACAACGATTTGGGGAGTCCTTCGAAGTCTTAGCCAAGTATCCTGATCGAATCCCCGTAAGTTGCAAGATTCTCTTCATACTTGTGTTTTATTAGAGAATATGACGGTGAATTTGTGAATTTATTCGATATACATAATATCGGTGATTCAGAGAGTCTGCAGGTGTCGAATTCTTAGGGTTTTTTTCAATCTGTTTTCCTCTTTACGAAATCTCTGCGGAATACGGAATAGCTTGCGTGTTTTGCTATAGGGAAATGAAATTCTAAAGTTATCAAATGATTTTAGTCAATGTTTTCTTTGTTATCCAAGAACAAACTTGTATGAGGTTTATCGCATAACTCGTGGCGAGAAGCTGCTTGTTGATTGTATTCAAATTCAATTTTGGTTGCTTAGACAAATGAAACATTCACTACTTTTGTTCCTAAAATTCAATGACATGGAAAATAACATGAAGTCTCAATTATGTAATCTTCTTATGTTTGTGAGGTGCCAATGATAGATAGATAGATGCTAATTTCCTCCAAAATACACGGAAGTAAATTAACGGTTTTCCTTTTGATGTTTCGAGTAATTGCAGGTAATTGTTGAGAGATATGGGAAATGTGAACTTCCTGAGATGGAAAAGAAGAAGTGAGCTTCTCCATCTTGTTTTGAGTTTCCTCAATGTTTCTGTTCCACTAATTTAATTTAACTGTTTCTGAAAATCAATTGAATGAAAGCAGAGATTAGCATTACACTCTTTTCTTGATTGCTCATGTCTGTTTTTGTTTGGCTATAAGTTTATGGTATTCTCTATTATATAGTCATCCCGAAACTTGGTAAATTTAGTGTCATTCTGATGGTTGAATCATGTTTTTGTCATAAATAAAACACTCCATGTTTCATAGATTTCTCACCTTGTCTGCTTGATAATGTTCTCATTTCTTGTTTCCTACCCATTTCTTATTTTCGTAAGAAACGAACTTTTTTGATAGATCTTTTGTTTCTTGTTTACAAAGTTTTCGAAATCTTTCTAGACACAAATTTTTGAGAAGCGACCAAAAAGTAGAAACATGAATATGATAAATAAACAAGAACATAGTTAAAATAGCCCACTTTATATTTTGAAAGGCAGTTGTGATCGATCCGAATGTAGCATGGTGGCATATTGTGTCATCACGATTTTGTTTTCTCTATTAGAATGTCATTTGTTTTCTCATTTGAGTAAAGGTACCTCATTCCTCGAGACATGTCTGTTGGGCAGTTCATCCATGTTCTAAGCACCAGGCTTCATCTAGCACCTGGAAAAGCTCTCTTTGTATTTGTAAACAATACTTTGCCTCAAACAGGTAGAGTTGCACTTGAGTTGATGCTATTGACCATTTTGGTGCCTCGCTATCGTTTGCTAATGACCTCAGATTATTGCAGCTAGCTTAATGAGTACGGTGTACGATTCATACAAGGATGGTGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAAACCTTTGGCTAAGACTAATCGGATTGAGATTTGGGAATGCTGAAGCTGTATGTTTCTGTAATCTCATTATGTCAATGTATATTCCTTGGACAAATTTGTTTTTTATGTTGACATTATCCATAAATTATAATGTTAATGTGTATAATATCATCCTTCATATTTTGCATTTTCTG

mRNA sequence

ATGGGAAGAACCAAATCCTTCAAGGACGAGTTCACCTTCGAACAACGATTTGGGGAGTCCTTCGAAGTCTTAGCCAAGTATCCTGATCGAATCCCCGTAATTGTTGAGAGATATGGGAAATGTGAACTTCCTGAGATGGAAAAGAAGAAGTACCTCATTCCTCGAGACATGTCTGTTGGGCAGTTCATCCATGTTCTAAGCACCAGGCTTCATCTAGCACCTGGAAAAGCTCTCTTTGTATTTGTAAACAATACTTTGCCTCAAACAGCTAGCTTAATGAGTACGGTGTACGATTCATACAAGGATGGTGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAAACCTTTGGCTAA

Coding sequence (CDS)

ATGGGAAGAACCAAATCCTTCAAGGACGAGTTCACCTTCGAACAACGATTTGGGGAGTCCTTCGAAGTCTTAGCCAAGTATCCTGATCGAATCCCCGTAATTGTTGAGAGATATGGGAAATGTGAACTTCCTGAGATGGAAAAGAAGAAGTACCTCATTCCTCGAGACATGTCTGTTGGGCAGTTCATCCATGTTCTAAGCACCAGGCTTCATCTAGCACCTGGAAAAGCTCTCTTTGTATTTGTAAACAATACTTTGCCTCAAACAGCTAGCTTAATGAGTACGGTGTACGATTCATACAAGGATGGTGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAAACCTTTGGCTAA

Protein sequence

MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVGQFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG*

Homology

[Close]

BLAST of Csa7G419640.1 vs. Swiss-Prot
Match: ATG8I_ARATH (Autophagy-related protein 8i OS=Arabidopsis thaliana GN=ATG8I PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.0e-45
Identity = 83/114 (72.81%), Postives = 100/114 (87.72%), Query Frame = 1


Query: 5   KSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVGQFIH 64
           KSFK+++T ++R  ES E++AKYP RIPVI E+Y K +LP +EKKK+L+PRDMSVGQFI+
Sbjct: 2   KSFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIY 61

Query: 65  VLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           +LS RLHL+PGKALFVFVNNTLPQTA+LM +VY+SYKD DGF+YMCYSSEKTFG
Sbjct: 62  ILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115

[Close]

BLAST of Csa7G419640.1 vs. Swiss-Prot
Match: ATG8D_ORYSJ (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica GN=ATG8D PE=3 SV=2)

HSP 1 Score: 169.5 bits (428), Expect = 2.3e-41
Identity = 80/117 (68.38%), Postives = 96/117 (82.05%), Query Frame = 1


Query: 3   RTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVGQF 62
           + + FK+EFT E+R  ES  ++A YPDRIPVIVE++ +  LPEMEK+KYL+P +M VGQF
Sbjct: 2   KPRPFKEEFTLEERAKESAAMIASYPDRIPVIVEKFSRSNLPEMEKRKYLVPCNMPVGQF 61

Query: 63  IHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKD-GDGFLYMCYSSEKTFG 119
           I +L +RLHL+PG ALFVFVNNTLPQTA LM +VY+SYKD GDGFLY+CYSSEKTFG
Sbjct: 62  IFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 118

[Close]

BLAST of Csa7G419640.1 vs. Swiss-Prot
Match: ATG8H_ARATH (Autophagy-related protein 8h OS=Arabidopsis thaliana GN=ATG8H PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 6.6e-41
Identity = 75/114 (65.79%), Postives = 95/114 (83.33%), Query Frame = 1


Query: 5   KSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVGQFIH 64
           KSFKD+F+ ++R  ES  ++AKYPDRIPVI+E+Y   +LP+MEK KYL+PRDM+VG FIH
Sbjct: 6   KSFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIH 65

Query: 65  VLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           +LS R+ L P KALFVFV+NTLPQTAS M ++Y+++K+ DGFLYMCYS+EKTFG
Sbjct: 66  MLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119

[Close]

BLAST of Csa7G419640.1 vs. Swiss-Prot
Match: ATG8A_ORYSJ (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica GN=ATG8A PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 6.6e-33
Identity = 70/118 (59.32%), Postives = 86/118 (72.88%), Query Frame = 1


Query: 1   MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG 60
           M RT SFK E   E+R  ES  +  KY DRIPVIVE+  K ++PE++KKKYL+P D++VG
Sbjct: 1   MART-SFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           QF++V+  R+ L+P KA+FVFV NTLP TASLMS +Y+  KD DGFLYM YS E TFG
Sbjct: 61  QFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Csa7G419640.1 vs. Swiss-Prot
Match: ATG8A_ORYSI (Autophagy-related protein 8A OS=Oryza sativa subsp. indica GN=ATG8A PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 6.6e-33
Identity = 70/118 (59.32%), Postives = 86/118 (72.88%), Query Frame = 1


Query: 1   MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG 60
           M RT SFK E   E+R  ES  +  KY DRIPVIVE+  K ++PE++KKKYL+P D++VG
Sbjct: 1   MART-SFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           QF++V+  R+ L+P KA+FVFV NTLP TASLMS +Y+  KD DGFLYM YS E TFG
Sbjct: 61  QFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Csa7G419640.1 vs. TrEMBL
Match: A0A0A0K6G3_CUCSA (Autophagy-related protein OS=Cucumis sativus GN=Csa_7G419640 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.0e-61
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1


Query: 1   MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG 60
           MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           QFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 118

[Close]

BLAST of Csa7G419640.1 vs. TrEMBL
Match: B9RN69_RICCO (Autophagy-related protein OS=Ricinus communis GN=RCOM_1344100 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 2.7e-49
Identity = 94/118 (79.66%), Postives = 110/118 (93.22%), Query Frame = 1


Query: 1   MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG 60
           MG+T SFK+EFTFEQR  ES +++AKYPDR+PVIVERY K +LPE+EKKKYL+PRDMSVG
Sbjct: 1   MGKTSSFKNEFTFEQRLEESNDIIAKYPDRVPVIVERYCKTDLPELEKKKYLVPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           QFIHVLS+RL +APGKALFVFV NTLPQTA+LM++VY+S+KDGDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSSRLRMAPGKALFVFVENTLPQTATLMNSVYESFKDGDGFLYMCYSSEKTFG 118

[Close]

BLAST of Csa7G419640.1 vs. TrEMBL
Match: A0A067K7T1_JATCU (Autophagy-related protein OS=Jatropha curcas GN=JCGZ_14091 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.7e-48
Identity = 92/118 (77.97%), Postives = 108/118 (91.53%), Query Frame = 1


Query: 1   MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG 60
           MG++ SFKDEFTFE+R  ES ++++KYP+R+PVIVERY K +LPEMEKKKYL+PRDMSVG
Sbjct: 1   MGKSNSFKDEFTFEERLEESRDIISKYPNRVPVIVERYSKTDLPEMEKKKYLVPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           QFIHVLS+RLHL PGKALFVFV NTLPQTA+LM +VY+S+KD DGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSSRLHLTPGKALFVFVKNTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 118

[Close]

BLAST of Csa7G419640.1 vs. TrEMBL
Match: A0A067H4R6_CITSI (Autophagy-related protein OS=Citrus sinensis GN=CISIN_1g033214mg PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 3.9e-48
Identity = 91/118 (77.12%), Postives = 107/118 (90.68%), Query Frame = 1


Query: 1   MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG 60
           MG+ +SFKDEFTFEQR  ES E++AKYPDR+PVI ERY K +LP+MEKKK+L+PRDMSVG
Sbjct: 1   MGKMQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           QFIH+LS+RLHL PGKALFVFV +TLPQTA+LM +VY+S+KD DGFLYMCYSSEKTFG
Sbjct: 61  QFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 118

[Close]

BLAST of Csa7G419640.1 vs. TrEMBL
Match: V4U1C0_9ROSI (Autophagy-related protein OS=Citrus clementina GN=CICLE_v10022874mg PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 3.9e-48
Identity = 91/118 (77.12%), Postives = 107/118 (90.68%), Query Frame = 1


Query: 1   MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG 60
           MG+ +SFKDEFTFEQR  ES E++AKYPDR+PVI ERY K +LP+MEKKK+L+PRDMSVG
Sbjct: 1   MGKMQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           QFIH+LS+RLHL PGKALFVFV +TLPQTA+LM +VY+S+KD DGFLYMCYSSEKTFG
Sbjct: 61  QFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 118

[Close]

BLAST of Csa7G419640.1 vs. TAIR10
Match: AT3G15580.1 (AT3G15580.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 183.0 bits (463), Expect = 1.1e-46
Identity = 83/114 (72.81%), Postives = 100/114 (87.72%), Query Frame = 1


Query: 5   KSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVGQFIH 64
           KSFK+++T ++R  ES E++AKYP RIPVI E+Y K +LP +EKKK+L+PRDMSVGQFI+
Sbjct: 2   KSFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIY 61

Query: 65  VLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           +LS RLHL+PGKALFVFVNNTLPQTA+LM +VY+SYKD DGF+YMCYSSEKTFG
Sbjct: 62  ILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115

[Close]

BLAST of Csa7G419640.1 vs. TAIR10
Match: AT3G06420.1 (AT3G06420.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 167.9 bits (424), Expect = 3.7e-42
Identity = 75/114 (65.79%), Postives = 95/114 (83.33%), Query Frame = 1


Query: 5   KSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVGQFIH 64
           KSFKD+F+ ++R  ES  ++AKYPDRIPVI+E+Y   +LP+MEK KYL+PRDM+VG FIH
Sbjct: 6   KSFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIH 65

Query: 65  VLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           +LS R+ L P KALFVFV+NTLPQTAS M ++Y+++K+ DGFLYMCYS+EKTFG
Sbjct: 66  MLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119

[Close]

BLAST of Csa7G419640.1 vs. TAIR10
Match: AT4G21980.2 (AT4G21980.2 Ubiquitin-like superfamily protein)

HSP 1 Score: 138.3 bits (347), Expect = 3.1e-33
Identity = 64/113 (56.64%), Postives = 82/113 (72.57%), Query Frame = 1


Query: 6   SFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVGQFIHV 65
           SFK     E R  ES  +  KYPDRIPVIVE+ G+ ++P+++KKKYL+P D++VGQF++V
Sbjct: 20  SFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFVYV 79

Query: 66  LSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           +  R+ L   KA+FVFV NTLP TA+LMS +Y+ +KD DGFLYM YS E TFG
Sbjct: 80  VRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 132

[Close]

BLAST of Csa7G419640.1 vs. TAIR10
Match: AT4G04620.1 (AT4G04620.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 137.9 bits (346), Expect = 4.1e-33
Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = 1


Query: 6   SFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVGQFIHV 65
           SFK     E R  ES  + AKYP+R+PVIVE+ G+ ++P+++KKKYL+P D+++GQF++V
Sbjct: 5   SFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVYV 64

Query: 66  LSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           +  R+ L   KA+FVFV NTLP TA+LMS +Y+ +KD DGFLYM YS E TFG
Sbjct: 65  VRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Csa7G419640.1 vs. TAIR10
Match: AT1G62040.2 (AT1G62040.2 Ubiquitin-like superfamily protein)

HSP 1 Score: 136.0 bits (341), Expect = 1.6e-32
Identity = 65/113 (57.52%), Postives = 82/113 (72.57%), Query Frame = 1


Query: 6   SFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVGQFIHV 65
           SFK E   E+R  ES  +  KYPDRIPVIVER  + ++P ++KKKYL+P D++VGQF++V
Sbjct: 19  SFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYV 78

Query: 66  LSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           +  R+ L+  KA+FVFV NTLP TA++MS +YD  KD DGFLYM YS E TFG
Sbjct: 79  VRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 131

[Close]

BLAST of Csa7G419640.1 vs. NCBI nr
Match: gi|449436361|ref|XP_004135961.1| (PREDICTED: autophagy-related protein 8i [Cucumis sativus])

HSP 1 Score: 243.8 bits (621), Expect = 1.5e-61
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1


Query: 1   MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG 60
           MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           QFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 118

[Close]

BLAST of Csa7G419640.1 vs. NCBI nr
Match: gi|659122904|ref|XP_008461385.1| (PREDICTED: autophagy-related protein 8i-like [Cucumis melo])

HSP 1 Score: 230.7 bits (587), Expect = 1.3e-57
Identity = 112/118 (94.92%), Postives = 114/118 (96.61%), Query Frame = 1


Query: 1   MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG 60
           MGRTKSFKDEFT+EQRF ESFEVLAKYPDR+PVIVERYGKC LPEMEKKKYLIPRDMSVG
Sbjct: 1   MGRTKSFKDEFTYEQRFEESFEVLAKYPDRVPVIVERYGKCGLPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           QFIHVLSTRL LAPGKALFVFVNNTLPQTASLMSTVYDSYKD DGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVNNTLPQTASLMSTVYDSYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Csa7G419640.1 vs. NCBI nr
Match: gi|255548303|ref|XP_002515208.1| (PREDICTED: autophagy-related protein 8i [Ricinus communis])

HSP 1 Score: 202.6 bits (514), Expect = 3.8e-49
Identity = 94/118 (79.66%), Postives = 110/118 (93.22%), Query Frame = 1


Query: 1   MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG 60
           MG+T SFK+EFTFEQR  ES +++AKYPDR+PVIVERY K +LPE+EKKKYL+PRDMSVG
Sbjct: 1   MGKTSSFKNEFTFEQRLEESNDIIAKYPDRVPVIVERYCKTDLPELEKKKYLVPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           QFIHVLS+RL +APGKALFVFV NTLPQTA+LM++VY+S+KDGDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSSRLRMAPGKALFVFVENTLPQTATLMNSVYESFKDGDGFLYMCYSSEKTFG 118

[Close]

BLAST of Csa7G419640.1 vs. NCBI nr
Match: gi|720047875|ref|XP_010270947.1| (PREDICTED: autophagy-related protein 8i [Nelumbo nucifera])

HSP 1 Score: 202.6 bits (514), Expect = 3.8e-49
Identity = 92/118 (77.97%), Postives = 108/118 (91.53%), Query Frame = 1


Query: 1   MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG 60
           MG+ +SFKDEFTF++RF ES ++LAKYPDR+PV+VERY K +LPEMEKKKYL+PRDMS+G
Sbjct: 1   MGKIRSFKDEFTFDERFQESRDILAKYPDRVPVVVERYSKTDLPEMEKKKYLVPRDMSIG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           QFIH+LS RLHL PGKALFVFV NTLPQTA+LM +VY+S+KD DGFLYMCYSSEKTFG
Sbjct: 61  QFIHILSIRLHLPPGKALFVFVKNTLPQTANLMDSVYESFKDEDGFLYMCYSSEKTFG 118

[Close]

BLAST of Csa7G419640.1 vs. NCBI nr
Match: gi|802692207|ref|XP_012082976.1| (PREDICTED: autophagy-related protein 8i-like [Jatropha curcas])

HSP 1 Score: 199.9 bits (507), Expect = 2.5e-48
Identity = 92/118 (77.97%), Postives = 108/118 (91.53%), Query Frame = 1


Query: 1   MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG 60
           MG++ SFKDEFTFE+R  ES ++++KYP+R+PVIVERY K +LPEMEKKKYL+PRDMSVG
Sbjct: 1   MGKSNSFKDEFTFEERLEESRDIISKYPNRVPVIVERYSKTDLPEMEKKKYLVPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 119
           QFIHVLS+RLHL PGKALFVFV NTLPQTA+LM +VY+S+KD DGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSSRLHLTPGKALFVFVKNTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 118

The following BLAST results are available for this feature:

BLAST of Csa7G419640.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATG8I_ARATH	2.0e-45	72.81	Autophagy-related protein 8i OS=Arabidopsis thaliana GN=ATG8I PE=1 SV=1	[more]
ATG8D_ORYSJ	2.3e-41	68.38	Autophagy-related protein 8D OS=Oryza sativa subsp. japonica GN=ATG8D PE=3 SV=2	[more]
ATG8H_ARATH	6.6e-41	65.79	Autophagy-related protein 8h OS=Arabidopsis thaliana GN=ATG8H PE=1 SV=1	[more]
ATG8A_ORYSJ	6.6e-33	59.32	Autophagy-related protein 8A OS=Oryza sativa subsp. japonica GN=ATG8A PE=3 SV=1	[more]
ATG8A_ORYSI	6.6e-33	59.32	Autophagy-related protein 8A OS=Oryza sativa subsp. indica GN=ATG8A PE=1 SV=1	[more]

BLAST of Csa7G419640.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6G3_CUCSA	1.0e-61	100.00	Autophagy-related protein OS=Cucumis sativus GN=Csa_7G419640 PE=3 SV=1	[more]
B9RN69_RICCO	2.7e-49	79.66	Autophagy-related protein OS=Ricinus communis GN=RCOM_1344100 PE=3 SV=1	[more]
A0A067K7T1_JATCU	1.7e-48	77.97	Autophagy-related protein OS=Jatropha curcas GN=JCGZ_14091 PE=3 SV=1	[more]
A0A067H4R6_CITSI	3.9e-48	77.12	Autophagy-related protein OS=Citrus sinensis GN=CISIN_1g033214mg PE=3 SV=1	[more]
V4U1C0_9ROSI	3.9e-48	77.12	Autophagy-related protein OS=Citrus clementina GN=CICLE_v10022874mg PE=3 SV=1	[more]

BLAST of Csa7G419640.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15580.1	1.1e-46	72.81	Ubiquitin-like superfamily protein	[more]
AT3G06420.1	3.7e-42	65.79	Ubiquitin-like superfamily protein	[more]
AT4G21980.2	3.1e-33	56.64	Ubiquitin-like superfamily protein	[more]
AT4G04620.1	4.1e-33	54.87	Ubiquitin-like superfamily protein	[more]
AT1G62040.2	1.6e-32	57.52	Ubiquitin-like superfamily protein	[more]

BLAST of Csa7G419640.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449436361\|ref\|XP_004135961.1\|	1.5e-61	100.00	PREDICTED: autophagy-related protein 8i [Cucumis sativus]	[more]
gi\|659122904\|ref\|XP_008461385.1\|	1.3e-57	94.92	PREDICTED: autophagy-related protein 8i-like [Cucumis melo]	[more]
gi\|255548303\|ref\|XP_002515208.1\|	3.8e-49	79.66	PREDICTED: autophagy-related protein 8i [Ricinus communis]	[more]
gi\|720047875\|ref\|XP_010270947.1\|	3.8e-49	77.97	PREDICTED: autophagy-related protein 8i [Nelumbo nucifera]	[more]
gi\|802692207\|ref\|XP_012082976.1\|	2.5e-48	77.97	PREDICTED: autophagy-related protein 8i-like [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR004241	Atg8-like

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa7G419640	Csa7G419640	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa7G419640.1	Csa7G419640.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa7G419640.1.utr3p1	Csa7G419640.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa7G419640.1.cds5	Csa7G419640.1.cds5	CDS
Csa7G419640.1.cds4	Csa7G419640.1.cds4	CDS
Csa7G419640.1.cds3	Csa7G419640.1.cds3	CDS
Csa7G419640.1.cds2	Csa7G419640.1.cds2	CDS
Csa7G419640.1.cds1	Csa7G419640.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa7G419640.1.utr5p1	Csa7G419640.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 1..118 score: 6.3
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 16..118 score: 1.9
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 3..118 score: 6.4
None	No IPR available	PANTHER	PTHR10969:SF25	AUTOPHAGY-RELATED PROTEIN 8I	coord: 1..118 score: 6.3