Csa7G398110.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGGAGATTGGGTGAGTAATGCTCTCAAAGTAGTGGTCTTTCGTGGTTTAATTAAGTAAGAATTCTTTTTTAATTACAAATTAAGAGAGAGAATTCAAACCACAAACTTTGTAGTTCTTAGTCTACATTGATATCAACATAGTGTTAGACTGATTAAAATAAATATTAGTCTACATTGATCTTCATGATTTTATTAATTAATTCCGAATTAAATGTAATAGTTTTAGCAAAAAAAGAAATTATGATAATAAAAGAAACGTCACAACATTTTCTAAATTTTGTTACTTTAAAATTGGTGTCATGACCAGTTTTTATCGATGCAATTTCTTTTTTTTTTATAAATAAAAAATAGGAAAAAGAAAAAAAATCCATTAAACAAAATTAATTGGGATCCACCTTCTTCGTCTTCCATCCAAATCAAAAAGAGAAACAGTTCAGAACTTGAAGAGGAAGAAACAAGAAGAAGAGGAAGAAGAAGAAGATCGAAGAAGATGAGTTTCTCTAAACTTATGGCTTCTCTTCTTCTCCTTGCTTCAATCTCATTATCAACCTCTCTCGTCTCCGATCCAGAAGCTCTTACCGCCTACGATATTCTCCAACAGTACGGTTTCCCCGTCGGCATTCTTCCTATAGGTGCTACCGGCTATCAATTGAACAGAGCCACCGGTGAATTCAGCCTCTACTTGAGTCAGAAATGCAAATTCAAAATCGATTCCTATGAATTGGAGTATAAATCTACCTTACAAGGCGTGATTTCCAAAGGCAGAATCAGGAAACTCAAAGGTGTTTCTGTTAAGATCTTCCTCTTGTGGCTCAGCATCGTCGAAGTCGTTAACGATGGTGACGACCTTCAATTTTCTGTTGGAATTGCTTCTGCAAATTTCCCGCTGGACAGTTTCTATGAGTCGCCGCGGTGTGGATGTGGATTTGATTGCGATAATGGCGCTGGGAGCTTGGTTTCGGCTTCTTGA ATGGATGGAGATTGGGTGAGTAATGCTCTCAAAGTAGTGGTCTTTCGTGAAGCTCTTACCGCCTACGATATTCTCCAACAGTACGGTTTCCCCGTCGGCATTCTTCCTATAGGTGCTACCGGCTATCAATTGAACAGAGCCACCGGTGAATTCAGCCTCTACTTGAGTCAGAAATGCAAATTCAAAATCGATTCCTATGAATTGGAGTATAAATCTACCTTACAAGGCGTGATTTCCAAAGGCAGAATCAGGAAACTCAAAGGTGTTTCTGTTAAGATCTTCCTCTTGTGGCTCAGCATCGTCGAAGTCGTTAACGATGGTGACGACCTTCAATTTTCTGTTGGAATTGCTTCTGCAAATTTCCCGCTGGACAGTTTCTATGAGTCGCCGCGGTGTGGATGTGGATTTGATTGCGATAATGGCGCTGGGAGCTTGGTTTCGGCTTCTTGA ATGGATGGAGATTGGGTGAGTAATGCTCTCAAAGTAGTGGTCTTTCGTGAAGCTCTTACCGCCTACGATATTCTCCAACAGTACGGTTTCCCCGTCGGCATTCTTCCTATAGGTGCTACCGGCTATCAATTGAACAGAGCCACCGGTGAATTCAGCCTCTACTTGAGTCAGAAATGCAAATTCAAAATCGATTCCTATGAATTGGAGTATAAATCTACCTTACAAGGCGTGATTTCCAAAGGCAGAATCAGGAAACTCAAAGGTGTTTCTGTTAAGATCTTCCTCTTGTGGCTCAGCATCGTCGAAGTCGTTAACGATGGTGACGACCTTCAATTTTCTGTTGGAATTGCTTCTGCAAATTTCCCGCTGGACAGTTTCTATGAGTCGCCGCGGTGTGGATGTGGATTTGATTGCGATAATGGCGCTGGGAGCTTGGTTTCGGCTTCTTGA MDGDWVSNALKVVVFREALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS*
BLAST of Csa7G398110.1 vs. TrEMBL
Match: A0A0A0K7U0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398110 PE=4 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 4.1e-79 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Csa7G398110.1 vs. TrEMBL
Match: A0A0D2QRM0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G127500 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 1.3e-45 Identity = 85/123 (69.11%), Postives = 103/123 (83.74%), Query Frame = 1
BLAST of Csa7G398110.1 vs. TrEMBL
Match: A0A0J8C1K9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g163620 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 1.5e-44 Identity = 90/136 (66.18%), Postives = 104/136 (76.47%), Query Frame = 1
BLAST of Csa7G398110.1 vs. TrEMBL
Match: A0A0D2R182_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G091000 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 3.3e-44 Identity = 88/130 (67.69%), Postives = 106/130 (81.54%), Query Frame = 1
BLAST of Csa7G398110.1 vs. TrEMBL
Match: I3TAG6_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 4.7e-43 Identity = 82/122 (67.21%), Postives = 100/122 (81.97%), Query Frame = 1
BLAST of Csa7G398110.1 vs. TAIR10
Match: AT1G02816.1 (AT1G02816.1 Protein of unknown function, DUF538) HSP 1 Score: 159.8 bits (403), Expect = 1.3e-39 Identity = 71/120 (59.17%), Postives = 90/120 (75.00%), Query Frame = 1
BLAST of Csa7G398110.1 vs. TAIR10
Match: AT4G02360.1 (AT4G02360.1 Protein of unknown function, DUF538) HSP 1 Score: 156.4 bits (394), Expect = 1.4e-38 Identity = 71/122 (58.20%), Postives = 87/122 (71.31%), Query Frame = 1
BLAST of Csa7G398110.1 vs. TAIR10
Match: AT4G02370.1 (AT4G02370.1 Protein of unknown function, DUF538) HSP 1 Score: 150.2 bits (378), Expect = 1.0e-36 Identity = 66/120 (55.00%), Postives = 85/120 (70.83%), Query Frame = 1
BLAST of Csa7G398110.1 vs. TAIR10
Match: AT1G02813.1 (AT1G02813.1 Protein of unknown function, DUF538) HSP 1 Score: 130.2 bits (326), Expect = 1.1e-30 Identity = 57/119 (47.90%), Postives = 78/119 (65.55%), Query Frame = 1
BLAST of Csa7G398110.1 vs. TAIR10
Match: AT5G19590.1 (AT5G19590.1 Protein of unknown function, DUF538) HSP 1 Score: 83.6 bits (205), Expect = 1.2e-16 Identity = 43/114 (37.72%), Postives = 67/114 (58.77%), Query Frame = 1
BLAST of Csa7G398110.1 vs. NCBI nr
Match: gi|700189716|gb|KGN44949.1| (hypothetical protein Csa_7G398110 [Cucumis sativus]) HSP 1 Score: 302.0 bits (772), Expect = 5.9e-79 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Csa7G398110.1 vs. NCBI nr
Match: gi|778728081|ref|XP_004136020.2| (PREDICTED: uncharacterized protein LOC101206914 [Cucumis sativus]) HSP 1 Score: 270.4 bits (690), Expect = 1.9e-69 Identity = 135/144 (93.75%), Postives = 138/144 (95.83%), Query Frame = 1
BLAST of Csa7G398110.1 vs. NCBI nr
Match: gi|659101339|ref|XP_008451556.1| (PREDICTED: uncharacterized protein LOC103492801 [Cucumis melo]) HSP 1 Score: 258.1 bits (658), Expect = 9.7e-66 Identity = 126/144 (87.50%), Postives = 136/144 (94.44%), Query Frame = 1
BLAST of Csa7G398110.1 vs. NCBI nr
Match: gi|823188091|ref|XP_012490398.1| (PREDICTED: uncharacterized protein At5g01610-like [Gossypium raimondii]) HSP 1 Score: 190.7 bits (483), Expect = 1.9e-45 Identity = 85/123 (69.11%), Postives = 103/123 (83.74%), Query Frame = 1
BLAST of Csa7G398110.1 vs. NCBI nr
Match: gi|870854236|gb|KMT06033.1| (hypothetical protein BVRB_7g163620 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 187.2 bits (474), Expect = 2.1e-44 Identity = 90/136 (66.18%), Postives = 104/136 (76.47%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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