Csa7G393440.2 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G393440.2
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	At1g03250/F15K9_13; contains IPR025952 (R3H-associated N-terminal domain)
Location	Chr7 : 14932436 .. 14936217 (+)
Sequence length	612

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAACAGAATATTCTTCCGAATCTAATCCTTCCCTCTGTTTCTCTTCCCAATTTCTAAGGCTCTGTTTCTTCCTTCTTTTTTCAATCCTTGGATTCGATTTTGCCCTAATTTTCCCATCTCCATCTCCCTCAACTTCATCTTTCGCCGATTCTCCCCTTTCCGTCTTCTCATCCAACCTCCAAAAATCACCTTCCCTACAAGATTTTCAATCCCATCCACAACAGGGGAAAACCACCGCTTGGGCTTCAATCGGATTCTTAGTTTTCCTCTCTAATCATGGCTTCCATTGATGTTCTTGAACGAGAAGGGAATCGTTTCCCCTTTTCCCCTCTTAACGATCCACTCAATGGTACTTCTTCATCTCTTTTGTTAATCGTATCTGCTGATTACATTTAATAATAATACCCATTTGAGTGATTTTGGTGTTTCTGTTATAAAATTTTGAAATTTTCTCTGGGATCTATATTTTGTTTTATTTCCACAGGTGATACGGATTCTCGGGGTATGTCAATCGAGAAGAAGATAGAATTCTTGGAGAGCTTGACTGGGAAGGTGGGGTGATTGTAAATGTTCGAAATTTTCTTTTTGGATCGTCACTCCATCTGGACTGCTCTGTGAACTGCTTGCTTAAGTTTCTTGTATTGATTGTAGTTCTATCAGTACGATGCTTTTGCAATGTGCTTTTGATAAAATGGAAGTTTAACATGGTTACCTGATGATGAATAGTTACAAAATATTTGGATTTTAATCTAGGTTTTTTGTTTTGTTCAATATCTCATATCATTGGCTTCATTTTGAAGGAAAACTAGTAACCGTCTGGTCATTTTTTCAGTTCTCATTTTTTCAATATTATTTGGAGTAGTTTTCATGTGGTAAGGTTATCTAACATTTACTATTTATTCTCGAATGGAAATTGGAATTACATTGTGAATAAAGGTGCATCTCAATGCCTAAATGGGTTACCTGAGTGAAACCAATGCCAACTCTCTTAATATATGAAGTGCCTAAGTGTTCATATTCCTATCATTTCTCCCAAAATTTTACTAAAAGGCTTCAGTTTAAGCAAACTAATTTTCCCCCAAGTTAAATCGATACTGCACTTTCCTATTTACCTTTTGACAATCTTTGTCCACAGAACTTCTCTTTTTTGTTAACTTTTAATTTTTCCCCCTACTCTTCTCAGGTTACCAATAGGAAGTCTCGCAGATGGTTAAACGATCGTCTTTTGATGGAACTTGTTCCTCGTTTGAATGCTGAGGAAATTAGAGGGCTGTTTGCTCCACCACCTTGGGGTGTGATACATCTAAAAACTGTCCTTTTCGTAATTTTTCAATCTTTGATGAGTGTTATTTCTGAGTAATATAGATGCTAGATGTTTTAGACGGTAGAGCCTTCTTGCTTTCATCATCTTGTGTTATGTTATGCTACATGGTTTGAGGTAAGACATCGAGCCCCATAACAATGTCTACGTGAAAAAGAATACGAGGGAAGAGAGTGGAGATTGCTTCTGTAATTAGTTAGTTTGGTGGTGGGGTGCAAAGGTCTGTAAGGGGAAACCCGGAAAAGAGTAAGGAAAGAGGAGTAATTAGGGTAAAGAGTGAAGAAGAAGAAGGGGGATTTGGTTTTTATTTATTTGAGAATAATGGTGTTTACTTTTTAGGATGATTGGATATGGGAAAGTGATCTAGACTATGATATCCAAACCTAGGAGTTTGCTTTGAATTTCTAGTTGATCGGTTATCAAACGTAGCATTAGTTAGAATTAGTAGCTTGTTTGATTTGTTTAGGATCACATATTCCAAGTCATATTGTTTTAAATTAATTCATTTTTGGTGTTATTATGGCCATGATCATTCTGTTTACGCAAGCTTTTCTTCGTCGCATCTAGTGGCTTGACTGTTAATTCTTAGAGGGAATGGCTATATCTGCTAATCTCTCCCATGTTAATGTTTACTGATCCTTTTACCCGAGCCTAGAAATTCCTCACACTGGTGAAAGGATTCATCATGGTTTGAGGTTAATTTGCAGGTGATGATGTACGGCCCACAACGTTCTCCATGACTAATGCAGAAGACTGGGACAAGTTCAGGAGTATTGACATGGATAAAGAGGTCTTTCTACTTTTTACTTTAATGTTACCATTTTCATTTTTAGAATTTCAAAACAGCAGACTGTTGCATAAATAATAGAATGGCAAAGCAGATCGTCTAATTTAAGAACTTAATCCAAATATGTTATTTTCTTGTTAGGCTAAGATCATTGGAGTCTTCGAGAACTCATCTGCTAAGAGAAAGGGTCATATTGATGCAGATAAAATGGCTTTCTTGAATGCTTGGCGTAGAATTGAATGTCGAACAAGGGAGGCTCTTCGCCGTAGTTTTCGTGTGGAGCTTGTTGAAGGTTATGAGGTATGAACGTGTACAATAATTCAGATTTGTTTCATTCATTTCATTTCTTAAACGTGGGTTAATTGCAAGTCTCAAATGTTTCTTTTCGCATTTACTGGATGATTAACATGGTAAGTTAAGCTTTTTCTCCATCACAAATCTGAATGTTAGTTGAAGAGTGGGAACTGCAATGCATCAATCAACTCAACTTATAACTTGCTAATAAGTTTCTTTTTATTCATCTTTTCAGGAGTGCATAAGATCTTTTATTTCAGACACTTGTAAAGAAGATGTCTTAATCATGCGAGTTCAAGATCCATTCCACAGATTATTGCTACATGGAGTTTGTGAGGTATTTCCTCCTGGTTGAATTTAAGGAAATAAACTGGCTCAATAATAAACTTCCAAATTTACACAAGCTGCTATTATATGGGTCAATACATTAAAGAACATACAAATTAAAATTTGGTAAGTCAAAATATCACTTTACTTTCGTGTTTTTTGGGTCTCATTCTATTTTAGTTCTTTTTACTTTTTTAGATATCTAGATTTACCACTGCAGTCGCTATAAATCCTAGTATTAGGCCTTACAGTTGGATTAAAGGTTTTTTTGTCAAACTTGGTAAGATAATAGTAACAATAATAATAATAGTTGTTAAGAGAATGTGACTATGGAAGGGAAACTAATAGATAATAGATGGGTTTGAGAATCGTTGCTGATAACTTAACACAGTGAACTAATTTCAAGATTTGTTCAAAGTATGAGTATTAAATTTGGACATTTAAAGACCTCAGACTGAAAGAAGAAAAAGTCCCAAACTATAAGGATCAAAACCAGTTGAATATATGAAATTCTTATCTTTCACAAGAATAGAGATGAATTGAAAAGCTTAAATATTGAAGACTAGATTACATTTAACTCGAATAACCTGTGTACTATTTGGCTGACTTCTTTTTACATCATTCGAATTGTTTTCTGGGTAGTTCTACAACTTGGACTCTGTGACCGTTCTCGAGTCGAAGAACAGTGGCTCTATGAAAATGACTCGGATAACAAGGAAGAAGAAGGCCATGGTTGAGGTCCCAAATATAACTCTGACCCATTTCCTTAAAATGTCCAAAGAAGGAACATGGTAGTTTCAATTGATTAGATGAAGAAACTTGATAGGACCTTATTATTGCATTGATGTTTGTGACAATAATATTAAAGATTCAATGTTAGGGTACATTATTTAGACTTTAGGTTCGACTGTACAGTTGTTGTTGCCATATATCCTGCTGCTGGACCAATGTGTACTGTAAATTATTCTCTCTTTCTCTTGTGGCACCAATTCATATCATTTGAACAAGGAAATGCCTTGCTTCCTTTATTCACAACACATTTCTTCCTTTT

mRNA sequence

ATGGCTTCCATTGATGTTCTTGAACGAGAAGGGAATCGTTTCCCCTTTTCCCCTCTTAACGATCCACTCAATGGTGATACGGATTCTCGGGGTATGTCAATCGAGAAGAAGATAGAATTCTTGGAGAGCTTGACTGGGAAGGTTACCAATAGGAAGTCTCGCAGATGGTTAAACGATCGTCTTTTGATGGAACTTGTTCCTCGTTTGAATGCTGAGGAAATTAGAGGGCTGTTTGCTCCACCACCTTGGGGTGATGATGTACGGCCCACAACGTTCTCCATGACTAATGCAGAAGACTGGGACAAGTTCAGGAGTATTGACATGGATAAAGAGGCTAAGATCATTGGAGTCTTCGAGAACTCATCTGCTAAGAGAAAGGGTCATATTGATGCAGATAAAATGGCTTTCTTGAATGCTTGGCGTAGAATTGAATGTCGAACAAGGGAGGCTCTTCGCCGTAGTTTTCGTGTGGAGCTTGTTGAAGGTTATGAGGAGTGCATAAGATCTTTTATTTCAGACACTTGTAAAGAAGATGTCTTAATCATGCGAGTTCAAGATCCATTCCACAGATTATTGCTACATGGAGTTTGTGAGGTATTTCCTCCTGGTTGA

Coding sequence (CDS)

ATGGCTTCCATTGATGTTCTTGAACGAGAAGGGAATCGTTTCCCCTTTTCCCCTCTTAACGATCCACTCAATGGTGATACGGATTCTCGGGGTATGTCAATCGAGAAGAAGATAGAATTCTTGGAGAGCTTGACTGGGAAGGTTACCAATAGGAAGTCTCGCAGATGGTTAAACGATCGTCTTTTGATGGAACTTGTTCCTCGTTTGAATGCTGAGGAAATTAGAGGGCTGTTTGCTCCACCACCTTGGGGTGATGATGTACGGCCCACAACGTTCTCCATGACTAATGCAGAAGACTGGGACAAGTTCAGGAGTATTGACATGGATAAAGAGGCTAAGATCATTGGAGTCTTCGAGAACTCATCTGCTAAGAGAAAGGGTCATATTGATGCAGATAAAATGGCTTTCTTGAATGCTTGGCGTAGAATTGAATGTCGAACAAGGGAGGCTCTTCGCCGTAGTTTTCGTGTGGAGCTTGTTGAAGGTTATGAGGAGTGCATAAGATCTTTTATTTCAGACACTTGTAAAGAAGATGTCTTAATCATGCGAGTTCAAGATCCATTCCACAGATTATTGCTACATGGAGTTTGTGAGGTATTTCCTCCTGGTTGA

Protein sequence

MASIDVLEREGNRFPFSPLNDPLNGDTDSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFENSSAKRKGHIDADKMAFLNAWRRIECRTREALRRSFRVELVEGYEECIRSFISDTCKEDVLIMRVQDPFHRLLLHGVCEVFPPG*

Homology

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BLAST of Csa7G393440.2 vs. TrEMBL
Match: A0A0A0K5V5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G393440 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 1.6e-110
Identity = 198/200 (99.00%), Postives = 199/200 (99.50%), Query Frame = 1


Query: 1   MASIDVLEREGNRFPFSPLNDPLNGDTDSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60
           MASIDVLEREGNRFPFSPLNDPLNGDTDSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR
Sbjct: 1   MASIDVLEREGNRFPFSPLNDPLNGDTDSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60

Query: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFEN 120
           LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFEN
Sbjct: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFEN 120

Query: 121 SSAKRKGHIDADKMAFLNAWRRIECRTREALRRSFRVELVEGYEECIRSFISDTCKEDVL 180
           SSAKRKGHIDADKMAFLNAWRRIECRTREALRRSFRVELVEGYEECIRSFISDTCKEDVL
Sbjct: 121 SSAKRKGHIDADKMAFLNAWRRIECRTREALRRSFRVELVEGYEECIRSFISDTCKEDVL 180

Query: 181 IMRVQDPFHRLLLHGVCEVF 201
           IMRVQDPFHRLLLHGVCE +
Sbjct: 181 IMRVQDPFHRLLLHGVCEFY 200

[Close]

BLAST of Csa7G393440.2 vs. TrEMBL
Match: W9R710_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025046 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 6.8e-77
Identity = 142/201 (70.65%), Postives = 170/201 (84.58%), Query Frame = 1


Query: 1   MASIDVLEREGNRFPFSPLNDPLNGDT-DSRGMSIEKKIEFLESLTGKVTNRKSRRWLND 60
           MA+ DVL+RE + F  SP  DP  GD   S  +SIEKKIEFLESL GKV+NR+SRRWLND
Sbjct: 1   MATPDVLQREEDLFLSSPFLDPRKGDNAKSLDLSIEKKIEFLESLAGKVSNRRSRRWLND 60

Query: 61  RLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFE 120
           RLLMELVPRLNAEEIRGLFAPPPWGDDV P+ F+MTN  +WDKFR+IDMD+EA I+G   
Sbjct: 61  RLLMELVPRLNAEEIRGLFAPPPWGDDVPPSPFAMTNGGEWDKFRNIDMDREADIMGALR 120

Query: 121 NSSAKRKGHIDADKMAFLNAWRRIECRTREALRRSFRVELVEGYEECIRSFISDTCKEDV 180
           +S AKRK H+D++KMA LNAWRR++CRTREALRRS  +EL+EGYEECIR++I+D+ +E+ 
Sbjct: 121 SSPAKRKDHVDSNKMAVLNAWRRVDCRTREALRRSSLLELIEGYEECIRAYITDSGEEET 180

Query: 181 LIMRVQDPFHRLLLHGVCEVF 201
           LI+RVQDPFHRLLLHGVCE +
Sbjct: 181 LILRVQDPFHRLLLHGVCEFY 201

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BLAST of Csa7G393440.2 vs. TrEMBL
Match: I1L826_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G025400 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.6e-76
Identity = 141/195 (72.31%), Postives = 161/195 (82.56%), Query Frame = 1


Query: 6   VLEREGNRFPFSPLNDPLNGDTDSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMEL 65
           VL RE +    SP  DP   D  S GMSIEKKIEFLESLTGKVTNR+SRRWLNDRLLMEL
Sbjct: 2   VLHRELDHLFSSPFVDPPKDDAKSSGMSIEKKIEFLESLTGKVTNRRSRRWLNDRLLMEL 61

Query: 66  VPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFENSSAKR 125
           VPRLNAEEIRGLFAPPPWGD+V P+TFSMTN E+WD+FR+IDMDKE  II   ENS  KR
Sbjct: 62  VPRLNAEEIRGLFAPPPWGDEVPPSTFSMTNMEEWDRFRNIDMDKEVNIIHSLENSIEKR 121

Query: 126 KGHIDADKMAFLNAWRRIECRTREALRRSFRVELVEGYEECIRSFISDTCKEDVLIMRVQ 185
           KGHIDADKMA LN W RI+CRTR+ALRRS   EL+EGYEEC+R+FI+++   D+L +++Q
Sbjct: 122 KGHIDADKMAVLNGWHRIDCRTRDALRRSCLSELIEGYEECVRAFITESTDGDILELQIQ 181

Query: 186 DPFHRLLLHGVCEVF 201
           DPFHRLLLHGVCE +
Sbjct: 182 DPFHRLLLHGVCEFY 196

[Close]

BLAST of Csa7G393440.2 vs. TrEMBL
Match: C6TC35_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.3e-75
Identity = 140/195 (71.79%), Postives = 160/195 (82.05%), Query Frame = 1


Query: 6   VLEREGNRFPFSPLNDPLNGDTDSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMEL 65
           VL RE +    SP  DP   D  S GMSIEKKIEFLESLTGKVTNR+SRRWLNDRLLMEL
Sbjct: 2   VLHRELDHLFSSPFVDPPKDDAKSSGMSIEKKIEFLESLTGKVTNRRSRRWLNDRLLMEL 61

Query: 66  VPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFENSSAKR 125
           VPRLNAEEIRGLFAPPPWGD+V P+TF MTN E+WD+FR+IDMDKE  II   ENS  KR
Sbjct: 62  VPRLNAEEIRGLFAPPPWGDEVPPSTFFMTNMEEWDRFRNIDMDKEVNIIHSLENSIEKR 121

Query: 126 KGHIDADKMAFLNAWRRIECRTREALRRSFRVELVEGYEECIRSFISDTCKEDVLIMRVQ 185
           KGHIDADKMA LN W RI+CRTR+ALRRS   EL+EGYEEC+R+FI+++   D+L +++Q
Sbjct: 122 KGHIDADKMAVLNGWHRIDCRTRDALRRSCLSELIEGYEECVRAFITESTDGDILELQIQ 181

Query: 186 DPFHRLLLHGVCEVF 201
           DPFHRLLLHGVCE +
Sbjct: 182 DPFHRLLLHGVCEFY 196

[Close]

BLAST of Csa7G393440.2 vs. TrEMBL
Match: V7BGD3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G170300g PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.6e-73
Identity = 137/195 (70.26%), Postives = 159/195 (81.54%), Query Frame = 1


Query: 6   VLEREGNRFPFSPLNDPLNGDTDSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMEL 65
           VL RE +    SP  DP    + S GMSIEKKIE+LESLTGKVTNR+SRRWLNDRLLMEL
Sbjct: 2   VLHRELDHLFLSPFTDPPKDGSKSSGMSIEKKIEYLESLTGKVTNRRSRRWLNDRLLMEL 61

Query: 66  VPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFENSSAKR 125
           VPRLNAEEIRGLFAPPPWGD+V P+TFSMTN E+WD+FR+IDMDKE  II   EN+  KR
Sbjct: 62  VPRLNAEEIRGLFAPPPWGDEVPPSTFSMTNIEEWDRFRNIDMDKEVTIINSLENTIEKR 121

Query: 126 KGHIDADKMAFLNAWRRIECRTREALRRSFRVELVEGYEECIRSFISDTCKEDVLIMRVQ 185
           KG IDADKMA LN WRRI+CRTR+ALRRS   EL++ YEEC+R+FI+ +   DVL +++Q
Sbjct: 122 KGPIDADKMAVLNCWRRIDCRTRDALRRSSLSELIDNYEECLRTFITASTDGDVLELQIQ 181

Query: 186 DPFHRLLLHGVCEVF 201
           DPFHRLLLHGVCE +
Sbjct: 182 DPFHRLLLHGVCEFY 196

[Close]

BLAST of Csa7G393440.2 vs. TAIR10
Match: AT1G03250.2 (AT1G03250.2 unknown protein)

HSP 1 Score: 259.6 bits (662), Expect = 1.6e-69
Identity = 131/205 (63.90%), Postives = 157/205 (76.59%), Query Frame = 1


Query: 1   MASIDVLEREGNRFPFSPLNDPLNGDTD-SRGMSIEKKIEFLESLTGKVTNRKSRRWLND 60
           MA+ +V+ R+      S L DP  GDT  SRG+S+EKKIE LESL G+V+NR+SRRWLND
Sbjct: 1   MAATNVMRRDE-----SLLIDPQRGDTSVSRGLSLEKKIEALESLAGQVSNRRSRRWLND 60

Query: 61  RLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKE------AK 120
           R+LMELVPRL+A+EIRGLFAPPPWGDDV P+ FS+TN  +WDKFR+IDMDKE      A 
Sbjct: 61  RILMELVPRLDAQEIRGLFAPPPWGDDVPPSAFSLTNVGEWDKFRNIDMDKEELCFFQAN 120

Query: 121 IIGVFENSSAKRKGHIDADKMAFLNAWRRIECRTREALRRSFRVELVEGYEECIRSFISD 180
           I+     SS ++KG +D DK+A LNAWRRI+CRTR+ALRRSF  EL+EGYE CI  FI +
Sbjct: 121 IMDSLNRSSVRQKGSVDGDKIAVLNAWRRIDCRTRDALRRSFLPELIEGYESCISHFIEE 180

Query: 181 TCKEDVLIMRVQDPFHRLLLHGVCE 199
             + DVL ++VQDPFHRLLLHGVCE
Sbjct: 181 GGEGDVLELKVQDPFHRLLLHGVCE 200

[Close]

BLAST of Csa7G393440.2 vs. NCBI nr
Match: gi|778727880|ref|XP_011659335.1| (PREDICTED: uncharacterized protein LOC101217014 [Cucumis sativus])

HSP 1 Score: 406.8 bits (1044), Expect = 2.3e-110
Identity = 198/200 (99.00%), Postives = 199/200 (99.50%), Query Frame = 1


Query: 1   MASIDVLEREGNRFPFSPLNDPLNGDTDSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60
           MASIDVLEREGNRFPFSPLNDPLNGDTDSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR
Sbjct: 1   MASIDVLEREGNRFPFSPLNDPLNGDTDSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60

Query: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFEN 120
           LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFEN
Sbjct: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFEN 120

Query: 121 SSAKRKGHIDADKMAFLNAWRRIECRTREALRRSFRVELVEGYEECIRSFISDTCKEDVL 180
           SSAKRKGHIDADKMAFLNAWRRIECRTREALRRSFRVELVEGYEECIRSFISDTCKEDVL
Sbjct: 121 SSAKRKGHIDADKMAFLNAWRRIECRTREALRRSFRVELVEGYEECIRSFISDTCKEDVL 180

Query: 181 IMRVQDPFHRLLLHGVCEVF 201
           IMRVQDPFHRLLLHGVCE +
Sbjct: 181 IMRVQDPFHRLLLHGVCEFY 200

[Close]

BLAST of Csa7G393440.2 vs. NCBI nr
Match: gi|659100999|ref|XP_008451376.1| (PREDICTED: uncharacterized protein LOC103492685 [Cucumis melo])

HSP 1 Score: 385.2 bits (988), Expect = 7.2e-104
Identity = 189/200 (94.50%), Postives = 192/200 (96.00%), Query Frame = 1


Query: 1   MASIDVLEREGNRFPFSPLNDPLNGDTDSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60
           MAS DVL+RE N FPFS  NDPLNGDTDSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR
Sbjct: 1   MASTDVLKREANPFPFSLPNDPLNGDTDSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60

Query: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFEN 120
           LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFEN
Sbjct: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFEN 120

Query: 121 SSAKRKGHIDADKMAFLNAWRRIECRTREALRRSFRVELVEGYEECIRSFISDTCKEDVL 180
           SS+KRKGHIDADKMAFLNAWRRIECRTREALRRSFR ELVEGYEE IRSFISDTCKEDVL
Sbjct: 121 SSSKRKGHIDADKMAFLNAWRRIECRTREALRRSFRAELVEGYEESIRSFISDTCKEDVL 180

Query: 181 IMRVQDPFHRLLLHGVCEVF 201
           IMRVQDPFHRLLLHGVCE +
Sbjct: 181 IMRVQDPFHRLLLHGVCEFY 200

[Close]

BLAST of Csa7G393440.2 vs. NCBI nr
Match: gi|703076623|ref|XP_010090381.1| (hypothetical protein L484_025046 [Morus notabilis])

HSP 1 Score: 295.0 bits (754), Expect = 9.8e-77
Identity = 142/201 (70.65%), Postives = 170/201 (84.58%), Query Frame = 1


Query: 1   MASIDVLEREGNRFPFSPLNDPLNGDT-DSRGMSIEKKIEFLESLTGKVTNRKSRRWLND 60
           MA+ DVL+RE + F  SP  DP  GD   S  +SIEKKIEFLESL GKV+NR+SRRWLND
Sbjct: 1   MATPDVLQREEDLFLSSPFLDPRKGDNAKSLDLSIEKKIEFLESLAGKVSNRRSRRWLND 60

Query: 61  RLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFE 120
           RLLMELVPRLNAEEIRGLFAPPPWGDDV P+ F+MTN  +WDKFR+IDMD+EA I+G   
Sbjct: 61  RLLMELVPRLNAEEIRGLFAPPPWGDDVPPSPFAMTNGGEWDKFRNIDMDREADIMGALR 120

Query: 121 NSSAKRKGHIDADKMAFLNAWRRIECRTREALRRSFRVELVEGYEECIRSFISDTCKEDV 180
           +S AKRK H+D++KMA LNAWRR++CRTREALRRS  +EL+EGYEECIR++I+D+ +E+ 
Sbjct: 121 SSPAKRKDHVDSNKMAVLNAWRRVDCRTREALRRSSLLELIEGYEECIRAYITDSGEEET 180

Query: 181 LIMRVQDPFHRLLLHGVCEVF 201
           LI+RVQDPFHRLLLHGVCE +
Sbjct: 181 LILRVQDPFHRLLLHGVCEFY 201

[Close]

BLAST of Csa7G393440.2 vs. NCBI nr
Match: gi|571481335|ref|XP_006588625.1| (PREDICTED: uncharacterized protein LOC100785058 [Glycine max])

HSP 1 Score: 293.1 bits (749), Expect = 3.7e-76
Identity = 141/195 (72.31%), Postives = 161/195 (82.56%), Query Frame = 1


Query: 6   VLEREGNRFPFSPLNDPLNGDTDSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMEL 65
           VL RE +    SP  DP   D  S GMSIEKKIEFLESLTGKVTNR+SRRWLNDRLLMEL
Sbjct: 2   VLHRELDHLFSSPFVDPPKDDAKSSGMSIEKKIEFLESLTGKVTNRRSRRWLNDRLLMEL 61

Query: 66  VPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFENSSAKR 125
           VPRLNAEEIRGLFAPPPWGD+V P+TFSMTN E+WD+FR+IDMDKE  II   ENS  KR
Sbjct: 62  VPRLNAEEIRGLFAPPPWGDEVPPSTFSMTNMEEWDRFRNIDMDKEVNIIHSLENSIEKR 121

Query: 126 KGHIDADKMAFLNAWRRIECRTREALRRSFRVELVEGYEECIRSFISDTCKEDVLIMRVQ 185
           KGHIDADKMA LN W RI+CRTR+ALRRS   EL+EGYEEC+R+FI+++   D+L +++Q
Sbjct: 122 KGHIDADKMAVLNGWHRIDCRTRDALRRSCLSELIEGYEECVRAFITESTDGDILELQIQ 181

Query: 186 DPFHRLLLHGVCEVF 201
           DPFHRLLLHGVCE +
Sbjct: 182 DPFHRLLLHGVCEFY 196

[Close]

BLAST of Csa7G393440.2 vs. NCBI nr
Match: gi|255638147|gb|ACU19387.1| (unknown [Glycine max])

HSP 1 Score: 290.8 bits (743), Expect = 1.8e-75
Identity = 140/195 (71.79%), Postives = 160/195 (82.05%), Query Frame = 1


Query: 6   VLEREGNRFPFSPLNDPLNGDTDSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMEL 65
           VL RE +    SP  DP   D  S GMSIEKKIEFLESLTGKVTNR+SRRWLNDRLLMEL
Sbjct: 2   VLHRELDHLFSSPFVDPPKDDAKSSGMSIEKKIEFLESLTGKVTNRRSRRWLNDRLLMEL 61

Query: 66  VPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFENSSAKR 125
           VPRLNAEEIRGLFAPPPWGD+V P+TF MTN E+WD+FR+IDMDKE  II   ENS  KR
Sbjct: 62  VPRLNAEEIRGLFAPPPWGDEVPPSTFFMTNMEEWDRFRNIDMDKEVNIIHSLENSIEKR 121

Query: 126 KGHIDADKMAFLNAWRRIECRTREALRRSFRVELVEGYEECIRSFISDTCKEDVLIMRVQ 185
           KGHIDADKMA LN W RI+CRTR+ALRRS   EL+EGYEEC+R+FI+++   D+L +++Q
Sbjct: 122 KGHIDADKMAVLNGWHRIDCRTRDALRRSCLSELIEGYEECVRAFITESTDGDILELQIQ 181

Query: 186 DPFHRLLLHGVCEVF 201
           DPFHRLLLHGVCE +
Sbjct: 182 DPFHRLLLHGVCEFY 196

The following BLAST results are available for this feature:

BLAST of Csa7G393440.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5V5_CUCSA	1.6e-110	99.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G393440 PE=4 SV=1	[more]
W9R710_9ROSA	6.8e-77	70.65	Uncharacterized protein OS=Morus notabilis GN=L484_025046 PE=4 SV=1	[more]
I1L826_SOYBN	2.6e-76	72.31	Uncharacterized protein OS=Glycine max GN=GLYMA_10G025400 PE=4 SV=1	[more]
C6TC35_SOYBN	1.3e-75	71.79	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]
V7BGD3_PHAVU	1.6e-73	70.26	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G170300g PE=4 SV=1	[more]

BLAST of Csa7G393440.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G03250.2	1.6e-69	63.90	unknown protein	[more]

BLAST of Csa7G393440.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778727880\|ref\|XP_011659335.1\|	2.3e-110	99.00	PREDICTED: uncharacterized protein LOC101217014 [Cucumis sativus]	[more]
gi\|659100999\|ref\|XP_008451376.1\|	7.2e-104	94.50	PREDICTED: uncharacterized protein LOC103492685 [Cucumis melo]	[more]
gi\|703076623\|ref\|XP_010090381.1\|	9.8e-77	70.65	hypothetical protein L484_025046 [Morus notabilis]	[more]
gi\|571481335\|ref\|XP_006588625.1\|	3.7e-76	72.31	PREDICTED: uncharacterized protein LOC100785058 [Glycine max]	[more]
gi\|255638147\|gb\|ACU19387.1\|	1.8e-75	71.79	unknown [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001374	R3H_dom
IPR025952	R3H-assoc_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa7G393440	Csa7G393440	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa7G393440.2	Csa7G393440.2-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa7G393440.2.utr5p1	Csa7G393440.2.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa7G393440.2.cds1	Csa7G393440.2.cds1	CDS
Csa7G393440.2.cds2	Csa7G393440.2.cds2	CDS
Csa7G393440.2.cds3	Csa7G393440.2.cds3	CDS
Csa7G393440.2.cds4	Csa7G393440.2.cds4	CDS
Csa7G393440.2.cds5	Csa7G393440.2.cds5	CDS
Csa7G393440.2.cds6	Csa7G393440.2.cds6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa7G393440.2.utr3p1	Csa7G393440.2.utr3p1	three_prime_UTR
Csa7G393440.2.utr3p2	Csa7G393440.2.utr3p2	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001374	R3H domain	unknown	SSF82708	R3H domain	coord: 140..200 score: 1.
IPR025952	R3H-associated N-terminal domain	PFAM	PF13902	R3H-assoc	coord: 33..153 score: 2.6
None	No IPR available	PANTHER	PTHR32019	FAMILY NOT NAMED	coord: 1..198 score: 4.8
None	No IPR available	PANTHER	PTHR32019:SF2	R3H DOMAIN-CONTAINING PROTEIN 4	coord: 1..198 score: 4.8