Csa7G349870.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa7G349870.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 12517659 .. 12517844 (-)
Sequence length186
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGGAATACCTATCTCGACATCAAGACCAACGTCGAAAAGAACGTTGCCATTACCGCGTTGGGATTGGCAAAATCAACCTATAAACATAACAACGTCGGCAAAAACTTTGCCCGATAGGGGCTTCGCTGACTCACGCAAGACATCGGAGAAAGCCTCGTCTGACGTCTGGTCAAAGCGTTGA

mRNA sequence

ATGTTGGGAATACCTATCTCGACATCAAGACCAACGTCGAAAAGAACGTTGCCATTACCGCGTTGGGATTGGCAAAATCAACCTATAAACATAACAACGTCGGCAAAAACTTTGCCCGATAGGGGCTTCGCTGACTCACGCAAGACATCGGAGAAAGCCTCGTCTGACGTCTGGTCAAAGCGTTGA

Coding sequence (CDS)

ATGTTGGGAATACCTATCTCGACATCAAGACCAACGTCGAAAAGAACGTTGCCATTACCGCGTTGGGATTGGCAAAATCAACCTATAAACATAACAACGTCGGCAAAAACTTTGCCCGATAGGGGCTTCGCTGACTCACGCAAGACATCGGAGAAAGCCTCGTCTGACGTCTGGTCAAAGCGTTGA

Protein sequence

MLGIPISTSRPTSKRTLPLPRWDWQNQPINITTSAKTLPDRGFADSRKTSEKASSDVWSKR*
Homology
[Close]
BLAST of Csa7G349870.1 vs. TrEMBL
Match: A0A0A0K8D6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G349870 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.0e-27
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1 

Query: 1  MLGIPISTSRPTSKRTLPLPRWDWQNQPINITTSAKTLPDRGFADSRKTSEKASSDVWSK 60
          MLGIPISTSRPTSKRTLPLPRWDWQNQPINITTSAKTLPDRGFADSRKTSEKASSDVWSK
Sbjct: 1  MLGIPISTSRPTSKRTLPLPRWDWQNQPINITTSAKTLPDRGFADSRKTSEKASSDVWSK 60

Query: 61 R 62
          R
Sbjct: 61 R 61

[Close]
BLAST of Csa7G349870.1 vs. NCBI nr
Match: gi|700189389|gb|KGN44622.1| (hypothetical protein Csa_7G349870 [Cucumis sativus])

HSP 1 Score: 129.0 bits (323), Expect = 2.8e-27
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1 

Query: 1  MLGIPISTSRPTSKRTLPLPRWDWQNQPINITTSAKTLPDRGFADSRKTSEKASSDVWSK 60
          MLGIPISTSRPTSKRTLPLPRWDWQNQPINITTSAKTLPDRGFADSRKTSEKASSDVWSK
Sbjct: 1  MLGIPISTSRPTSKRTLPLPRWDWQNQPINITTSAKTLPDRGFADSRKTSEKASSDVWSK 60

Query: 61 R 62
          R
Sbjct: 61 R 61

The following BLAST results are available for this feature:
BLAST of Csa7G349870.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8D6_CUCSA2.0e-27100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G349870 PE=4 SV=1[more]
BLAST of Csa7G349870.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189389|gb|KGN44622.1|2.8e-27100.00hypothetical protein Csa_7G349870 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa7G349870Csa7G349870gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa7G349870.1Csa7G349870.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa7G349870.1.cds1Csa7G349870.1.cds1CDS