Csa7G343860.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa7G343860.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 12494189 .. 12494431 (+)
Sequence length210
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCAAAGATGGGCTCGACCGAAGATGGATTGGTGAGGGATGCAAAACGAAGAAGAAACGCGACAACTGGCGGACAGAGTCGTACGTCTTTGACTCATTGTTCGTCGATGTTGCTCGGCAGACGACACAAGCAAGTTTCACAACGTTCACTTGGTGTGGTGGTTGGTGCAACGGAGGAAGACTGGTGATAACCAATGGTGGCGACTAGGATTTGGTGAGGGTGAAGAAGATGAATGAGGAA

mRNA sequence

ATGAGCAAAGATGGGCTCGACCGAAGATGGATTGGTGAGGGATGCAAAACGAAGAAGAAACGCGACAACTGGCGGACAGAGTCGTACGTCTTTGACTCATTGTTCGTCGATGTTGCTCGGCAGACGACACAAGCAAGTTTCACAACGTTCACTTGGTGTGGTGGTTGGTGCAACGGAGGAAGACTGGTGATAACCAATGGTGGCGACTAG

Coding sequence (CDS)

ATGAGCAAAGATGGGCTCGACCGAAGATGGATTGGTGAGGGATGCAAAACGAAGAAGAAACGCGACAACTGGCGGACAGAGTCGTACGTCTTTGACTCATTGTTCGTCGATGTTGCTCGGCAGACGACACAAGCAAGTTTCACAACGTTCACTTGGTGTGGTGGTTGGTGCAACGGAGGAAGACTGGTGATAACCAATGGTGGCGACTAG

Protein sequence

MSKDGLDRRWIGEGCKTKKKRDNWRTESYVFDSLFVDVARQTTQASFTTFTWCGGWCNGGRLVITNGGD*
Homology
[Close]
BLAST of Csa7G343860.1 vs. TrEMBL
Match: A0A0A0K4K8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G343860 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 3.8e-35
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MSKDGLDRRWIGEGCKTKKKRDNWRTESYVFDSLFVDVARQTTQASFTTFTWCGGWCNGG 60
          MSKDGLDRRWIGEGCKTKKKRDNWRTESYVFDSLFVDVARQTTQASFTTFTWCGGWCNGG
Sbjct: 1  MSKDGLDRRWIGEGCKTKKKRDNWRTESYVFDSLFVDVARQTTQASFTTFTWCGGWCNGG 60

Query: 61 RLVITNGGD 70
          RLVITNGGD
Sbjct: 61 RLVITNGGD 69

[Close]
BLAST of Csa7G343860.1 vs. NCBI nr
Match: gi|700189387|gb|KGN44620.1| (hypothetical protein Csa_7G343860 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 5.4e-35
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MSKDGLDRRWIGEGCKTKKKRDNWRTESYVFDSLFVDVARQTTQASFTTFTWCGGWCNGG 60
          MSKDGLDRRWIGEGCKTKKKRDNWRTESYVFDSLFVDVARQTTQASFTTFTWCGGWCNGG
Sbjct: 1  MSKDGLDRRWIGEGCKTKKKRDNWRTESYVFDSLFVDVARQTTQASFTTFTWCGGWCNGG 60

Query: 61 RLVITNGGD 70
          RLVITNGGD
Sbjct: 61 RLVITNGGD 69

The following BLAST results are available for this feature:
BLAST of Csa7G343860.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4K8_CUCSA3.8e-35100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G343860 PE=4 SV=1[more]
BLAST of Csa7G343860.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189387|gb|KGN44620.1|5.4e-35100.00hypothetical protein Csa_7G343860 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa7G343860Csa7G343860gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa7G343860.1Csa7G343860.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa7G343860.1.cds1Csa7G343860.1.cds1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa7G343860.1.utr3p1Csa7G343860.1.utr3p1three_prime_UTR