Csa7G298780.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa7G298780.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 10445992 .. 10446240 (+)
Sequence length249
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAATGTTGGTGGCTTAAAGCTAAGAAGAACGGTTGGCCTCAATGGAAGAAGGAAATATCAAGTCGCAGCGGATGGAAGATGGAAAGGCGGAGAAAAGAAAGTACACCGGCAGCCAGATGGTCTAAGAATCGAGGTGGAAATGAACAAAAGATGGTCACCGGCGGCCCAAGGAAGATGTATGCCTTGATAATTGCCAAAGGACAGTGGCTTGCAATGAAAAAAGAAGAGATAGATGAGTCATGA

mRNA sequence

ATGAAGAAATGTTGGTGGCTTAAAGCTAAGAAGAACGGTTGGCCTCAATGGAAGAAGGAAATATCAAGTCGCAGCGGATGGAAGATGGAAAGGCGGAGAAAAGAAAGTACACCGGCAGCCAGATGGTCTAAGAATCGAGGTGGAAATGAACAAAAGATGGTCACCGGCGGCCCAAGGAAGATGTATGCCTTGATAATTGCCAAAGGACAGTGGCTTGCAATGAAAAAAGAAGAGATAGATGAGTCATGA

Coding sequence (CDS)

ATGAAGAAATGTTGGTGGCTTAAAGCTAAGAAGAACGGTTGGCCTCAATGGAAGAAGGAAATATCAAGTCGCAGCGGATGGAAGATGGAAAGGCGGAGAAAAGAAAGTACACCGGCAGCCAGATGGTCTAAGAATCGAGGTGGAAATGAACAAAAGATGGTCACCGGCGGCCCAAGGAAGATGTATGCCTTGATAATTGCCAAAGGACAGTGGCTTGCAATGAAAAAAGAAGAGATAGATGAGTCATGA

Protein sequence

MKKCWWLKAKKNGWPQWKKEISSRSGWKMERRRKESTPAARWSKNRGGNEQKMVTGGPRKMYALIIAKGQWLAMKKEEIDES*
Homology
[Close]
BLAST of Csa7G298780.1 vs. TrEMBL
Match: A0A0A0K802_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G298780 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.3e-42
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

Query: 1  MKKCWWLKAKKNGWPQWKKEISSRSGWKMERRRKESTPAARWSKNRGGNEQKMVTGGPRK 60
          MKKCWWLKAKKNGWPQWKKEISSRSGWKMERRRKESTPAARWSKNRGGNEQKMVTGGPRK
Sbjct: 1  MKKCWWLKAKKNGWPQWKKEISSRSGWKMERRRKESTPAARWSKNRGGNEQKMVTGGPRK 60

Query: 61 MYALIIAKGQWLAMKKEEIDES 83
          MYALIIAKGQWLAMKKEEIDES
Sbjct: 61 MYALIIAKGQWLAMKKEEIDES 82

[Close]
BLAST of Csa7G298780.1 vs. NCBI nr
Match: gi|700189229|gb|KGN44462.1| (hypothetical protein Csa_7G298780 [Cucumis sativus])

HSP 1 Score: 179.9 bits (455), Expect = 1.9e-42
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

Query: 1  MKKCWWLKAKKNGWPQWKKEISSRSGWKMERRRKESTPAARWSKNRGGNEQKMVTGGPRK 60
          MKKCWWLKAKKNGWPQWKKEISSRSGWKMERRRKESTPAARWSKNRGGNEQKMVTGGPRK
Sbjct: 1  MKKCWWLKAKKNGWPQWKKEISSRSGWKMERRRKESTPAARWSKNRGGNEQKMVTGGPRK 60

Query: 61 MYALIIAKGQWLAMKKEEIDES 83
          MYALIIAKGQWLAMKKEEIDES
Sbjct: 61 MYALIIAKGQWLAMKKEEIDES 82

The following BLAST results are available for this feature:
BLAST of Csa7G298780.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K802_CUCSA1.3e-42100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G298780 PE=4 SV=1[more]
BLAST of Csa7G298780.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189229|gb|KGN44462.1|1.9e-42100.00hypothetical protein Csa_7G298780 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa7G298780Csa7G298780gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa7G298780.1Csa7G298780.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa7G298780.1.cds1Csa7G298780.1.cds1CDS