Csa7G290490.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa7G290490.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 10103493 .. 10103951 (+)
Sequence length261
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATCGAGTGACCCTAGAATACTCGAACTGAATTTAAGGGTAAGCGGGTAATTTCACATAGTGTTAGACTTGAGGGGAAGACCTCTTATAATTGAGTTTAGGAAAAATGGGTCAGATTTCTTTTTCACTTGGAAAAAGAGCCATCAGTCAAAAAAAAGAAAAATAGAAAAACAACCCAAAAAAAGAACCTAATTTCATAACTTCTTCTCGCCGCCCCCTTTCTGTCTTTCTCGCCAGCGGCTACTCTGCAAACCCACAAGCAGGGCCGCTGACCATAGACTCCGTCCACCTGTCTTTGTGTATCACACCTGCGCCCTCTTGCTCAACCATCGACGGCGGTGGTTTGTTGTCGACAAAACCCACAGATATAGCTTGCGAAGCAGACCTGCTTCAGACGCTCTTGCCCAGACCTTCGCGATAACGTTTCTCTCCGTTTTCTACAAGTTTCAGCGCTGA

mRNA sequence

ATGCAATCGAGTGACCCTAGAATACTCGAACTGAATTTAAGGCGGCTACTCTGCAAACCCACAAGCAGGGCCGCTGACCATAGACTCCGTCCACCTGTCTTTGTGTATCACACCTGCGCCCTCTTGCTCAACCATCGACGGCGGTGGTTTGTTGTCGACAAAACCCACAGATATAGCTTGCGAAGCAGACCTGCTTCAGACGCTCTTGCCCAGACCTTCGCGATAACGTTTCTCTCCGTTTTCTACAAGTTTCAGCGCTGA

Coding sequence (CDS)

ATGCAATCGAGTGACCCTAGAATACTCGAACTGAATTTAAGGCGGCTACTCTGCAAACCCACAAGCAGGGCCGCTGACCATAGACTCCGTCCACCTGTCTTTGTGTATCACACCTGCGCCCTCTTGCTCAACCATCGACGGCGGTGGTTTGTTGTCGACAAAACCCACAGATATAGCTTGCGAAGCAGACCTGCTTCAGACGCTCTTGCCCAGACCTTCGCGATAACGTTTCTCTCCGTTTTCTACAAGTTTCAGCGCTGA

Protein sequence

MQSSDPRILELNLRRLLCKPTSRAADHRLRPPVFVYHTCALLLNHRRRWFVVDKTHRYSLRSRPASDALAQTFAITFLSVFYKFQR*
Homology
[Close]
BLAST of Csa7G290490.1 vs. TrEMBL
Match: A0A0A0K9D6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290490 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.0e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1 

Query: 1  MQSSDPRILELNLRRLLCKPTSRAADHRLRPPVFVYHTCALLLNHRRRWFVVDKTHRYSL 60
          MQSSDPRILELNLRRLLCKPTSRAADHRLRPPVFVYHTCALLLNHRRRWFVVDKTHRYSL
Sbjct: 1  MQSSDPRILELNLRRLLCKPTSRAADHRLRPPVFVYHTCALLLNHRRRWFVVDKTHRYSL 60

Query: 61 RSRPASDALAQTFAITFLSVFYKFQR 87
          RSRPASDALAQTFAITFLSVFYKFQR
Sbjct: 61 RSRPASDALAQTFAITFLSVFYKFQR 86

[Close]
BLAST of Csa7G290490.1 vs. NCBI nr
Match: gi|700189193|gb|KGN44426.1| (hypothetical protein Csa_7G290490 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 5.7e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1 

Query: 1  MQSSDPRILELNLRRLLCKPTSRAADHRLRPPVFVYHTCALLLNHRRRWFVVDKTHRYSL 60
          MQSSDPRILELNLRRLLCKPTSRAADHRLRPPVFVYHTCALLLNHRRRWFVVDKTHRYSL
Sbjct: 1  MQSSDPRILELNLRRLLCKPTSRAADHRLRPPVFVYHTCALLLNHRRRWFVVDKTHRYSL 60

Query: 61 RSRPASDALAQTFAITFLSVFYKFQR 87
          RSRPASDALAQTFAITFLSVFYKFQR
Sbjct: 61 RSRPASDALAQTFAITFLSVFYKFQR 86

The following BLAST results are available for this feature:
BLAST of Csa7G290490.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9D6_CUCSA4.0e-42100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290490 PE=4 SV=1[more]
BLAST of Csa7G290490.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189193|gb|KGN44426.1|5.7e-42100.00hypothetical protein Csa_7G290490 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa7G290490Csa7G290490gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa7G290490.1Csa7G290490.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa7G290490.1.cds1Csa7G290490.1.cds1CDS
Csa7G290490.1.cds2Csa7G290490.1.cds2CDS