Csa7G195290.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa7G195290.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 7049130 .. 7049543 (+)
Sequence length282
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTGGTTAAGTGTGGTACATGTAGAGTCATCAAACAATGATTTTAGTGATAATGGTAGTGCGTTTAACATGATGTCATGGGATTATGATGTTGATGTAAATGTTGAGGCGTTTGAGGTACCTGAGGTGGATGTTAGTACTCATACACATTGTATTAAGTTGATAAACGATCATAATTCGATATACAAAGTTATAATGTACGTTTAACGTAGAATCAAGTCACAAAAGGGTTAAGAATATCAACCCATACACCTTATTCTCTAGTGTGTATACACTGTCACATCTTGGTTGGCGAGTTATGCAGAGCCGATTTGCCATGTTTATGAATGGAAGACTACAGAAGGATTCATCGATAAAGTGATTCTACCACTAAGAATAGTTGGTCAGGTTGATTGCTGTAAAAAAGTTTGA

mRNA sequence

ATGACTTGGTTAAGTGTGGTACATGTAGAGTCATCAAACAATGATTTTAGTGATAATGGTAGTGCGTTTAACATGATGTCATGGGATTATGATGTTGATGTAAATGTTGAGGCGTTTGAGGTACCTGAGGTGGATTGTGTATACACTGTCACATCTTGGTTGGCGAGTTATGCAGAGCCGATTTGCCATGTTTATGAATGGAAGACTACAGAAGGATTCATCGATAAAGTGATTCTACCACTAAGAATAGTTGGTCAGGTTGATTGCTGTAAAAAAGTTTGA

Coding sequence (CDS)

ATGACTTGGTTAAGTGTGGTACATGTAGAGTCATCAAACAATGATTTTAGTGATAATGGTAGTGCGTTTAACATGATGTCATGGGATTATGATGTTGATGTAAATGTTGAGGCGTTTGAGGTACCTGAGGTGGATTGTGTATACACTGTCACATCTTGGTTGGCGAGTTATGCAGAGCCGATTTGCCATGTTTATGAATGGAAGACTACAGAAGGATTCATCGATAAAGTGATTCTACCACTAAGAATAGTTGGTCAGGTTGATTGCTGTAAAAAAGTTTGA

Protein sequence

MTWLSVVHVESSNNDFSDNGSAFNMMSWDYDVDVNVEAFEVPEVDCVYTVTSWLASYAEPICHVYEWKTTEGFIDKVILPLRIVGQVDCCKKV*
Homology
[Close]
BLAST of Csa7G195290.1 vs. TrEMBL
Match: A0A0A0K375_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G195290 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 6.2e-49
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1 

Query: 1  MTWLSVVHVESSNNDFSDNGSAFNMMSWDYDVDVNVEAFEVPEVDCVYTVTSWLASYAEP 60
          MTWLSVVHVESSNNDFSDNGSAFNMMSWDYDVDVNVEAFEVPEVDCVYTVTSWLASYAEP
Sbjct: 1  MTWLSVVHVESSNNDFSDNGSAFNMMSWDYDVDVNVEAFEVPEVDCVYTVTSWLASYAEP 60

Query: 61 ICHVYEWKTTEGFIDKVILPLRIVGQVDCCKKV 94
          ICHVYEWKTTEGFIDKVILPLRIVGQVDCCKKV
Sbjct: 61 ICHVYEWKTTEGFIDKVILPLRIVGQVDCCKKV 93

[Close]
BLAST of Csa7G195290.1 vs. NCBI nr
Match: gi|700188887|gb|KGN44120.1| (hypothetical protein Csa_7G195290 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 8.8e-49
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1 

Query: 1  MTWLSVVHVESSNNDFSDNGSAFNMMSWDYDVDVNVEAFEVPEVDCVYTVTSWLASYAEP 60
          MTWLSVVHVESSNNDFSDNGSAFNMMSWDYDVDVNVEAFEVPEVDCVYTVTSWLASYAEP
Sbjct: 1  MTWLSVVHVESSNNDFSDNGSAFNMMSWDYDVDVNVEAFEVPEVDCVYTVTSWLASYAEP 60

Query: 61 ICHVYEWKTTEGFIDKVILPLRIVGQVDCCKKV 94
          ICHVYEWKTTEGFIDKVILPLRIVGQVDCCKKV
Sbjct: 61 ICHVYEWKTTEGFIDKVILPLRIVGQVDCCKKV 93

The following BLAST results are available for this feature:
BLAST of Csa7G195290.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K375_CUCSA6.2e-49100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G195290 PE=4 SV=1[more]
BLAST of Csa7G195290.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188887|gb|KGN44120.1|8.8e-49100.00hypothetical protein Csa_7G195290 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa7G195290Csa7G195290gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa7G195290.1Csa7G195290.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa7G195290.1.cds1Csa7G195290.1.cds1CDS
Csa7G195290.1.cds2Csa7G195290.1.cds2CDS