Csa7G193730.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTTGGATAAAACACTACAGGAATCCCATATAAACTTCACCACGCCTACTACCTCTTACCTATGCGTTTCTATTTCCCACCAAAAACCGACGTCCTTTCATTTCTTCTCCAAAACACTTTCTCAAGCTCTTCTATGTTTATCAACCCCCGGAAACCCTTCCCATGTCCGTCTCCTCACTCCGGCGAGAAGCGGATCAAGTATTACTCCTCTTACCATGAAATACTCTTAGTCGGCGAGGGAGATTTCTCTTTCTCTCTCTCTTTGGCCATGTCTTTTGGCTCTGCTTCCAATATCCTCGCCACTTCTCTCGACTCCTATCCTACGTATGCCTACCTCCTTCATTTTTAACTTTTTTCTTTTTTTTTTTATTCGGTTCATCGTCTGTGTTTTCTGTTTTCTGACGGATGCGAACCGTAATGAAACGACTGAAACCCTCTCCTTTCGTTTACTGTTTATGTTTTTGCTTTCTTCATCTTCTTCATCTTCTTCTTCTTCTTTCTCTTAGCTGTGATCAGTGGTTATATCTGAGTAAATGTTGCTTTTTTTCATCTGATTTCTAATTCGATTCGTGCATTTTTTAATGTGTAGTTTAATTTGATCATTTGATTGCTGTTCTTACCTTCGTTTTGTGTCTTTTCTTTCTACATTTGGTTTAATAATTAGATGATGTGATCAGCGTTTCATTTTCTTTGATTCGATTCATGCAATCGCTTTTTTCGTTTCAGACGACGTGGTGACGAGGTACAAGAATGCGAGGTTAAATTTGACGATTCTGAATGGTTTGGGTGCGTCTGTTTTGCATGGAGTCGATGCGACTAAAATGAAGTATCATACCGACTTACATATGCGGAAATTTGATCGGATCATCTTCAATTTCCCCCACGCTGGTTTCTTTGGAAGAGGGGACAGTCATTTAATGATTCGGTATATCCTCTTCATCCTCTTCATTGAATCCACGTTTTGAATTTCTAAGATCGAGAAAGTGGTAATTGTAAGCTGGATATGGAACTGAGTTTTGCAGGATGCACAATAGACTTGTACGTCATTTCGTCAAGAATGCAAGCCGAATGCTTCGAGTTAATGGCGAAATCCATGTGGATCACAAAACAAAACCCCCATTTTCGGATTGGAATATTGTTCAACTCGCCTATCAAAACTCACTGACATTGATTGGTTGTGCTGATTTCAATATACAGGATTACCCTGGATATCACAACAAGAGAGGGCAGGGCAATAGATGTGATTGCCCTTTCTTTTTGGGTGAGTGCTCTACTTTCAATTTTAGTATCAACCATTCAGCTAAAAGGACACCAAGATTATTGCACATCAATAATACCTTAGATATCCAAAGAAACCTACCATATCCAGAGATCCCAATCTCAAGTCACTCCCATCTTCCATATCCTACTTCATTTGAATCAAGTTATTGA ATGGCGTTGGATAAAACACTACAGGAATCCCATATAAACTTCACCACGCCTACTACCTCTTACCTATGCGTTTCTATTTCCCACCAAAAACCGACGTCCTTTCATTTCTTCTCCAAAACACTTTCTCAAGCTCTTCTATGTTTATCAACCCCCGGAAACCCTTCCCATGTCCGTCTCCTCACTCCGGCGAGAAGCGGATCAAACGACGTGGTGACGAGGTACAAGAATGCGAGGTTAAATTTGACGATTCTGAATGGTTTGGGTGCGTCTGTTTTGCATGGAGTCGATGCGACTAAAATGAAGTATCATACCGACTTACATATGCGGAAATTTGATCGGATCATCTTCAATTTCCCCCACGCTGGTTTCTTTGGAAGAGGGGACAGTCATTTAATGATTCGGATGCACAATAGACTTGTACGTCATTTCGTCAAGAATGCAAGCCGAATGCTTCGAGTTAATGGCGAAATCCATGTGGATCACAAAACAAAACCCCCATTTTCGGATTGGAATATTGTTCAACTCGCCTATCAAAACTCACTGACATTGATTGGTTGTGCTGATTTCAATATACAGGATTACCCTGGATATCACAACAAGAGAGGGCAGGGCAATAGATGTGATTGCCCTTTCTTTTTGGGTGAGTGCTCTACTTTCAATTTTAGTATCAACCATTCAGCTAAAAGGACACCAAGATTATTGCACATCAATAATACCTTAGATATCCAAAGAAACCTACCATATCCAGAGATCCCAATCTCAAGTCACTCCCATCTTCCATATCCTACTTCATTTGAATCAAGTTATTGA ATGGCGTTGGATAAAACACTACAGGAATCCCATATAAACTTCACCACGCCTACTACCTCTTACCTATGCGTTTCTATTTCCCACCAAAAACCGACGTCCTTTCATTTCTTCTCCAAAACACTTTCTCAAGCTCTTCTATGTTTATCAACCCCCGGAAACCCTTCCCATGTCCGTCTCCTCACTCCGGCGAGAAGCGGATCAAACGACGTGGTGACGAGGTACAAGAATGCGAGGTTAAATTTGACGATTCTGAATGGTTTGGGTGCGTCTGTTTTGCATGGAGTCGATGCGACTAAAATGAAGTATCATACCGACTTACATATGCGGAAATTTGATCGGATCATCTTCAATTTCCCCCACGCTGGTTTCTTTGGAAGAGGGGACAGTCATTTAATGATTCGGATGCACAATAGACTTGTACGTCATTTCGTCAAGAATGCAAGCCGAATGCTTCGAGTTAATGGCGAAATCCATGTGGATCACAAAACAAAACCCCCATTTTCGGATTGGAATATTGTTCAACTCGCCTATCAAAACTCACTGACATTGATTGGTTGTGCTGATTTCAATATACAGGATTACCCTGGATATCACAACAAGAGAGGGCAGGGCAATAGATGTGATTGCCCTTTCTTTTTGGGTGAGTGCTCTACTTTCAATTTTAGTATCAACCATTCAGCTAAAAGGACACCAAGATTATTGCACATCAATAATACCTTAGATATCCAAAGAAACCTACCATATCCAGAGATCCCAATCTCAAGTCACTCCCATCTTCCATATCCTACTTCATTTGAATCAAGTTATTGA MALDKTLQESHINFTTPTTSYLCVSISHQKPTSFHFFSKTLSQALLCLSTPGNPSHVRLLTPARSGSNDVVTRYKNARLNLTILNGLGASVLHGVDATKMKYHTDLHMRKFDRIIFNFPHAGFFGRGDSHLMIRMHNRLVRHFVKNASRMLRVNGEIHVDHKTKPPFSDWNIVQLAYQNSLTLIGCADFNIQDYPGYHNKRGQGNRCDCPFFLGECSTFNFSINHSAKRTPRLLHINNTLDIQRNLPYPEIPISSHSHLPYPTSFESSY*
BLAST of Csa7G193730.1 vs. Swiss-Prot
Match: Y4648_ARATH (Uncharacterized protein At4g26485 OS=Arabidopsis thaliana GN=At4g26485 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 4.8e-31 Identity = 73/180 (40.56%), Postives = 102/180 (56.67%), Query Frame = 1
BLAST of Csa7G193730.1 vs. Swiss-Prot
Match: BMT5_SCHPO (25S rRNA (uridine-N(3))-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bmt5 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.1e-10 Identity = 42/146 (28.77%), Postives = 68/146 (46.58%), Query Frame = 1
BLAST of Csa7G193730.1 vs. Swiss-Prot
Match: FDXA1_MOUSE (Ferredoxin-fold anticodon-binding domain-containing protein 1 homolog OS=Mus musculus GN=Fdxacb1 PE=2 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 1.8e-06 Identity = 43/155 (27.74%), Postives = 62/155 (40.00%), Query Frame = 1
BLAST of Csa7G193730.1 vs. TrEMBL
Match: A0A0A0K3N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G193730 PE=4 SV=1) HSP 1 Score: 564.3 bits (1453), Expect = 8.0e-158 Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 1
BLAST of Csa7G193730.1 vs. TrEMBL
Match: A0A0K9QBE4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_205200 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 4.5e-52 Identity = 109/194 (56.19%), Postives = 133/194 (68.56%), Query Frame = 1
BLAST of Csa7G193730.1 vs. TrEMBL
Match: F6I4W3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g01660 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 7.7e-52 Identity = 102/161 (63.35%), Postives = 119/161 (73.91%), Query Frame = 1
BLAST of Csa7G193730.1 vs. TrEMBL
Match: I1N071_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G073100 PE=4 SV=2) HSP 1 Score: 210.7 bits (535), Expect = 2.2e-51 Identity = 110/203 (54.19%), Postives = 135/203 (66.50%), Query Frame = 1
BLAST of Csa7G193730.1 vs. TrEMBL
Match: G7IY67_MEDTR (DUF2431 domain protein OS=Medicago truncatula GN=MTR_3g061070 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.9e-51 Identity = 112/196 (57.14%), Postives = 134/196 (68.37%), Query Frame = 1
BLAST of Csa7G193730.1 vs. TAIR10
Match: AT1G55790.1 (AT1G55790.1 Domain of unknown function (DUF2431)) HSP 1 Score: 189.5 bits (480), Expect = 2.7e-48 Identity = 99/200 (49.50%), Postives = 118/200 (59.00%), Query Frame = 1
BLAST of Csa7G193730.1 vs. TAIR10
Match: AT4G26485.1 (AT4G26485.1 Domain of unknown function (DUF2431)) HSP 1 Score: 134.4 bits (337), Expect = 1.0e-31 Identity = 69/158 (43.67%), Postives = 93/158 (58.86%), Query Frame = 1
BLAST of Csa7G193730.1 vs. TAIR10
Match: AT1G55800.1 (AT1G55800.1 Domain of unknown function (DUF2431)) HSP 1 Score: 129.8 bits (325), Expect = 2.5e-30 Identity = 71/165 (43.03%), Postives = 86/165 (52.12%), Query Frame = 1
BLAST of Csa7G193730.1 vs. TAIR10
Match: AT5G56060.1 (AT5G56060.1 Domain of unknown function (DUF2431)) HSP 1 Score: 112.8 bits (281), Expect = 3.2e-25 Identity = 60/143 (41.96%), Postives = 85/143 (59.44%), Query Frame = 1
BLAST of Csa7G193730.1 vs. TAIR10
Match: AT5G56075.1 (AT5G56075.1 Domain of unknown function (DUF2431)) HSP 1 Score: 94.4 bits (233), Expect = 1.2e-19 Identity = 56/151 (37.09%), Postives = 79/151 (52.32%), Query Frame = 1
BLAST of Csa7G193730.1 vs. NCBI nr
Match: gi|700188880|gb|KGN44113.1| (hypothetical protein Csa_7G193730 [Cucumis sativus]) HSP 1 Score: 564.3 bits (1453), Expect = 1.1e-157 Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 1
BLAST of Csa7G193730.1 vs. NCBI nr
Match: gi|778730251|ref|XP_011659738.1| (PREDICTED: uncharacterized protein At4g26485 [Cucumis sativus]) HSP 1 Score: 429.1 bits (1102), Expect = 5.7e-117 Identity = 209/233 (89.70%), Postives = 217/233 (93.13%), Query Frame = 1
BLAST of Csa7G193730.1 vs. NCBI nr
Match: gi|659094509|ref|XP_008448099.1| (PREDICTED: uncharacterized protein At4g26485-like [Cucumis melo]) HSP 1 Score: 380.6 bits (976), Expect = 2.3e-102 Identity = 191/242 (78.93%), Postives = 204/242 (84.30%), Query Frame = 1
BLAST of Csa7G193730.1 vs. NCBI nr
Match: gi|902114436|gb|KNA03846.1| (hypothetical protein SOVF_205200 [Spinacia oleracea]) HSP 1 Score: 213.0 bits (541), Expect = 6.5e-52 Identity = 109/194 (56.19%), Postives = 133/194 (68.56%), Query Frame = 1
BLAST of Csa7G193730.1 vs. NCBI nr
Match: gi|731433510|ref|XP_002263396.3| (PREDICTED: uncharacterized protein At4g26485 [Vitis vinifera]) HSP 1 Score: 213.0 bits (541), Expect = 6.5e-52 Identity = 102/165 (61.82%), Postives = 121/165 (73.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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