Csa7G186190.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATAAAAATACAAAAACATATTCTAAGTGGAACAAATTCAATTCCACAGCCTGTCTTTGCCCTCTCGTCGGAGATCAAACAACCAACTCCTCCCTCTCTCTCTCTCTCTCTCGCCGGAATTATGCTCTCCCACCGTTCCTTCTTCAACTTAACAATGCTTCTTCTCTTCTTCCTCTCACTGCTTTTCACTTTTTCTTCCTCTGCTTTCATTTCAGGTAACTTCACCAGATTCAAAATCACCGCCACTTTCTCTATTTTCCCTCTTCTTCTCTATTTCTCTCCTTGACCCTCCTTTTTATGTTTTCCAGGACATGCCTTTGAATCCAACCCTTCAATCGGTCGGAACCTCCTACAGGCTAAAAAAGGTTCCACCCCTTCCTCTCTTTAACATCTTTTTCTCTTTTCTTTTTTCTGACTTCTTTGTCTAGCTTAGTTTAGTTGTACGCATGTTTCAGCTGTTAGGTTTTGAAAGCTCTATTTTATTTATGCTTCTTTTCTTTCTATAAGATCTTCCCGATCTGTGTTTCTTCTCTCTCGTGGTTGTGTGGAATTGGGGGTTACTAGATATCGCTTCTGTTGGTTTCAGTTTGACCATTTGATTCTCTTGTTTTCTCTTCCTGTTCCACTACTCACGACCGTTCTGTAAAAAGGAAATTCAGCCGAAATAGTGACTGAATTTTAATTTTCATTATTATCGTATTGGGTTGATCTGTCCGTGATTTACGCTCTGATTCAATAACATTAAAACGGAGGAAAAAAAGTATGTTGCATAAAGTTGCAAAAATTGTGGGTATTAACTGTTTGATTTCTTCCTAAAGATTAGTTGATGTTCATTCTGTTTTAATACTGTTGGATTCTCATCATATGGTAAGCCAGCTGAAGATGAAGATTCTAAATCTGGCGTCTCATTACTTTCTTATGAGAAAACAACTGAATCGTTAGTTGAATGATCTGGGATTATGGCTTTAACATTTTCGTATCTGGTCAGTTGAGCTAGTTGTATGTTGTAAAAGTTCTATCTATACATTGGATTATAAAGTACAGTTATAACTTATATTATAAGGTAATGTAAGTCCAATATAGTAATTTTGTTACATTCATTTGGTTAACTAAATTGATTAAGAAATTAATATTCTTTGTTTTTTATCACTTAATACGTATGTGAAGATAAAAAAAAGTAGCCTCTTAAAAAGTTATATTCTATGGTCTCTGTTGTCTATACCTCCTGCCGGCCTTGTTTGTTTAGATTTTGGCTTTTAATTTAATTTTGTATTAGTGATGTGTTACATAGCATAGGTTTGTAGAAGAACTATTTTGAGATTTGAATAATTTTTTTCTTTTCTTCCCAGAAATCTTCATATTATGTGCATGTGCATTTAGAAAATGAAATAATTAGTTTATGTGCAGTTTTTATCCAAGTGTATAGATGTTTTTCTCTTGGACACAAATTAAAGAACTAACGATAATTTATTTAGCTTTTGATTAGAGATCTGCCACGTTTCCCTTTATGTTCCATTTCTTTTGTCCATATATTAAGCATATGACAATTGATAATCTTTTAGATGAGTGTATTCAAGAGGAATGAGCAGTTTTTGGTGCATACCTCTGTCTTTCATGGAGGAGAAAAGGATCTCTTGATGTTGTTTTGAAATTGCTAGAATTTGATGACTACATATTTTGTGTGGAAAGTCATTAGATTGCTAAATGCCCACTTGTTATTAGTGGTCATAATCATATTAGCTTATTACTCATCACGCTTAACCTTTCCAGATTTCAAATAGAAGTTTGAAAACTTTGTAGTGGTATTTTTGCTTACATTATCTGTGCCCTACCAGTGATTTCTACTTTCTGAAGCTACTCTAAAACTAACTTGATCTAATCATGTAACGTTGCACAATTTATGCAGCTTGTCCAGTGAACTTTGAATTCTTGAACTACACAATCATCACAAGCAAGTGCAAGGGGCCTCGATACCCTCCCAAGTTCTGTTGTTCAGCTTTGAAAGAATTTGCTTGCCCTTATGTCGAAGATCTCAATGATTTAACAAATGATTGTGCTTCGACCATGTTCAGTTACATTAACTTGTATGGAAAATACCCTCCTGGTCTCTTCTCTAGCGAGTGCAAGGAGGGGAAGGAAGGTCTAGAGTGCCCTGCACTCCCACCCTCCACTTCAGCTGATCTAAGTTGGGGCTCGAAAACAAGCTTACCATCGTATTCACTGATTCTCTTGACTGGATTCGTACTGCTTGTACGGCTATTATGATAAGGTCCAAATTCCTTCCATTTTTTCCTTTTCTTATTTGTTACTGTACGTTAAACATACTTGAAAAATTGCAATTCTTTATTACCATGTATTTATTATAATAGTTTCATAGGCTAAACTTGTTTTATCTGTCTACCACTTTGATAGCTGTGGAAAGCGAGTTCTTATTCATGAGATTGAACTGCAAAAGTTCTTATTTGAGGTCCTTTCTATGTTTTTATTTGGTCAAGGTGTATCGTCATCATCATATATAGAGTTGTTTGCGACATGTTTCATTTTATCATGTGATGTAATATAGAACCATTACTAAACTTTCATTTATGGTTGATTT ATGCTCTCCCACCGTTCCTTCTTCAACTTAACAATGCTTCTTCTCTTCTTCCTCTCACTGCTTTTCACTTTTTCTTCCTCTGCTTTCATTTCAGGACATGCCTTTGAATCCAACCCTTCAATCGGTCGGAACCTCCTACAGGCTAAAAAAGCTTGTCCAGTGAACTTTGAATTCTTGAACTACACAATCATCACAAGCAAGTGCAAGGGGCCTCGATACCCTCCCAAGTTCTGTTGTTCAGCTTTGAAAGAATTTGCTTGCCCTTATGTCGAAGATCTCAATGATTTAACAAATGATTGTGCTTCGACCATGTTCAGTTACATTAACTTGTATGGAAAATACCCTCCTGGTCTCTTCTCTAGCGAGTGCAAGGAGGGGAAGGAAGGTCTAGAGTGCCCTGCACTCCCACCCTCCACTTCAGCTGATCTAAGTTGGGGCTCGAAAACAAGCTTACCATCGTATTCACTGATTCTCTTGACTGGATTCGTACTGCTTGTACGGCTATTATGA ATGCTCTCCCACCGTTCCTTCTTCAACTTAACAATGCTTCTTCTCTTCTTCCTCTCACTGCTTTTCACTTTTTCTTCCTCTGCTTTCATTTCAGGACATGCCTTTGAATCCAACCCTTCAATCGGTCGGAACCTCCTACAGGCTAAAAAAGCTTGTCCAGTGAACTTTGAATTCTTGAACTACACAATCATCACAAGCAAGTGCAAGGGGCCTCGATACCCTCCCAAGTTCTGTTGTTCAGCTTTGAAAGAATTTGCTTGCCCTTATGTCGAAGATCTCAATGATTTAACAAATGATTGTGCTTCGACCATGTTCAGTTACATTAACTTGTATGGAAAATACCCTCCTGGTCTCTTCTCTAGCGAGTGCAAGGAGGGGAAGGAAGGTCTAGAGTGCCCTGCACTCCCACCCTCCACTTCAGCTGATCTAAGTTGGGGCTCGAAAACAAGCTTACCATCGTATTCACTGATTCTCTTGACTGGATTCGTACTGCTTGTACGGCTATTATGA MLSHRSFFNLTMLLLFFLSLLFTFSSSAFISGHAFESNPSIGRNLLQAKKACPVNFEFLNYTIITSKCKGPRYPPKFCCSALKEFACPYVEDLNDLTNDCASTMFSYINLYGKYPPGLFSSECKEGKEGLECPALPPSTSADLSWGSKTSLPSYSLILLTGFVLLVRLL*
BLAST of Csa7G186190.1 vs. Swiss-Prot
Match: LRE_ARATH (GPI-anchored protein LORELEI OS=Arabidopsis thaliana GN=LRE PE=2 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 1.7e-42 Identity = 82/161 (50.93%), Postives = 110/161 (68.32%), Query Frame = 1
BLAST of Csa7G186190.1 vs. TrEMBL
Match: A0A0A0K362_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G186190 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 2.5e-93 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1
BLAST of Csa7G186190.1 vs. TrEMBL
Match: V4NAG5_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10014845mg PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.1e-53 Identity = 101/162 (62.35%), Postives = 127/162 (78.40%), Query Frame = 1
BLAST of Csa7G186190.1 vs. TrEMBL
Match: Q9ZWN0_VIGRA (GPI-anchored protein OS=Vigna radiata GN=ARG8 PE=2 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 3.3e-53 Identity = 103/163 (63.19%), Postives = 121/163 (74.23%), Query Frame = 1
BLAST of Csa7G186190.1 vs. TrEMBL
Match: E0CTD1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g03800 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 5.7e-53 Identity = 107/162 (66.05%), Postives = 128/162 (79.01%), Query Frame = 1
BLAST of Csa7G186190.1 vs. TrEMBL
Match: I3SAU8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 7.5e-53 Identity = 104/155 (67.10%), Postives = 117/155 (75.48%), Query Frame = 1
BLAST of Csa7G186190.1 vs. TAIR10
Match: AT5G56170.1 (AT5G56170.1 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1) HSP 1 Score: 208.0 bits (528), Expect = 4.6e-54 Identity = 104/165 (63.03%), Postives = 125/165 (75.76%), Query Frame = 1
BLAST of Csa7G186190.1 vs. TAIR10
Match: AT4G26466.1 (AT4G26466.1 lorelei) HSP 1 Score: 173.7 bits (439), Expect = 9.6e-44 Identity = 82/161 (50.93%), Postives = 110/161 (68.32%), Query Frame = 1
BLAST of Csa7G186190.1 vs. TAIR10
Match: AT4G28280.2 (AT4G28280.2 LORELEI-LIKE-GPI ANCHORED PROTEIN 3) HSP 1 Score: 165.6 bits (418), Expect = 2.6e-41 Identity = 84/153 (54.90%), Postives = 103/153 (67.32%), Query Frame = 1
BLAST of Csa7G186190.1 vs. TAIR10
Match: AT2G20700.1 (AT2G20700.1 LORELEI-LIKE-GPI ANCHORED PROTEIN 2) HSP 1 Score: 153.3 bits (386), Expect = 1.3e-37 Identity = 80/152 (52.63%), Postives = 99/152 (65.13%), Query Frame = 1
BLAST of Csa7G186190.1 vs. NCBI nr
Match: gi|449443998|ref|XP_004139762.1| (PREDICTED: GPI-anchored protein LORELEI [Cucumis sativus]) HSP 1 Score: 349.4 bits (895), Expect = 3.6e-93 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1
BLAST of Csa7G186190.1 vs. NCBI nr
Match: gi|659093945|ref|XP_008447799.1| (PREDICTED: GPI-anchored protein LORELEI-like [Cucumis melo]) HSP 1 Score: 327.0 bits (837), Expect = 1.9e-86 Identity = 159/169 (94.08%), Postives = 162/169 (95.86%), Query Frame = 1
BLAST of Csa7G186190.1 vs. NCBI nr
Match: gi|950969491|ref|XP_014499837.1| (PREDICTED: GPI-anchored protein LORELEI-like [Vigna radiata var. radiata]) HSP 1 Score: 218.4 bits (555), Expect = 9.7e-54 Identity = 104/163 (63.80%), Postives = 122/163 (74.85%), Query Frame = 1
BLAST of Csa7G186190.1 vs. NCBI nr
Match: gi|567178657|ref|XP_006401368.1| (hypothetical protein EUTSA_v10014845mg [Eutrema salsugineum]) HSP 1 Score: 217.6 bits (553), Expect = 1.6e-53 Identity = 101/162 (62.35%), Postives = 127/162 (78.40%), Query Frame = 1
BLAST of Csa7G186190.1 vs. NCBI nr
Match: gi|3868853|dbj|BAA34247.1| (GPI-anchored protein [Vigna radiata]) HSP 1 Score: 216.1 bits (549), Expect = 4.8e-53 Identity = 103/163 (63.19%), Postives = 121/163 (74.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
|