Csa7G088710.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa7G088710.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 5441370 .. 5441619 (+)
Sequence length165
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGGAATGTCTATCTGATACATTTTCTAAAGTTATCTGGATACTGCATGTTTGAAACTCAAGGATACAGTAATACAATCTATAGAATAGTTCTTATCTATCGTCAGTACACTAGGACATATATACTAAAGATAGACTTGAACGTTATTAACAGCCAAAGAATCAAATACTTTACAAGCAGACACTTCATCCATAAAATATTACAACCCTCCTGGGCATGGTGTTAGTGCAGAGTTATCCGTGTAG

mRNA sequence

ATGTTTGGGAATGTCTATCTGATACATTTTCTAAAGTTATCTGGATACTGCATGTTTGAAACTCAAGGATACACCAAAGAATCAAATACTTTACAAGCAGACACTTCATCCATAAAATATTACAACCCTCCTGGGCATGGTGTTAGTGCAGAGTTATCCGTGTAG

Coding sequence (CDS)

ATGTTTGGGAATGTCTATCTGATACATTTTCTAAAGTTATCTGGATACTGCATGTTTGAAACTCAAGGATACACCAAAGAATCAAATACTTTACAAGCAGACACTTCATCCATAAAATATTACAACCCTCCTGGGCATGGTGTTAGTGCAGAGTTATCCGTGTAG

Protein sequence

MFGNVYLIHFLKLSGYCMFETQGYTKESNTLQADTSSIKYYNPPGHGVSAELSV*
Homology
[Close]
BLAST of Csa7G088710.1 vs. TrEMBL
Match: A0A0A0K517_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G088710 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.0e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 1 

Query: 1  MFGNVYLIHFLKLSGYCMFETQGYTKESNTLQADTSSIKYYNPPGHGVSAELSV 55
          MFGNVYLIHFLKLSGYCMFETQGYTKESNTLQADTSSIKYYNPPGHGVSAELSV
Sbjct: 1  MFGNVYLIHFLKLSGYCMFETQGYTKESNTLQADTSSIKYYNPPGHGVSAELSV 54

[Close]
BLAST of Csa7G088710.1 vs. NCBI nr
Match: gi|700188766|gb|KGN43999.1| (hypothetical protein Csa_7G088710 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 2.9e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 1 

Query: 1  MFGNVYLIHFLKLSGYCMFETQGYTKESNTLQADTSSIKYYNPPGHGVSAELSV 55
          MFGNVYLIHFLKLSGYCMFETQGYTKESNTLQADTSSIKYYNPPGHGVSAELSV
Sbjct: 1  MFGNVYLIHFLKLSGYCMFETQGYTKESNTLQADTSSIKYYNPPGHGVSAELSV 54

The following BLAST results are available for this feature:
BLAST of Csa7G088710.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K517_CUCSA2.0e-23100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G088710 PE=4 SV=1[more]
BLAST of Csa7G088710.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188766|gb|KGN43999.1|2.9e-23100.00hypothetical protein Csa_7G088710 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa7G088710Csa7G088710gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa7G088710.1Csa7G088710.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa7G088710.1.cds1Csa7G088710.1.cds1CDS
Csa7G088710.1.cds2Csa7G088710.1.cds2CDS