Csa7G087710.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa7G087710.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 5432643 .. 5432838 (+)
Sequence length168
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAGCATAATACATTTGAACGCGGAAGAACTTCGCTGTTCGGAAGCGGTTTGTCGTTTGCCGTTTGCCGTGGAAGCCGTTGGCCGTGTGGAAGCCGTTCGTCGGGTGGAAGTCATTCGTCGTTCCCGCTCTGTGTTGTGTGGAACTCGAGTGTGGAGATGAGAGTAGGGTTTCAACAAACGTGGAGACGTGA

mRNA sequence

ATGGGGAGCATAATACATTTGAACGCGGAAGAACTTCGCTGTTCGGAAGCGCCGTTGGCCGTGTGGAAGCCGTTCGTCGGGTGGAAGTCATTCGTCGTTCCCGCTCTGTGTTGTGTGGAACTCGAGTGTGGAGATGAGAGTAGGGTTTCAACAAACGTGGAGACGTGA

Coding sequence (CDS)

ATGGGGAGCATAATACATTTGAACGCGGAAGAACTTCGCTGTTCGGAAGCGCCGTTGGCCGTGTGGAAGCCGTTCGTCGGGTGGAAGTCATTCGTCGTTCCCGCTCTGTGTTGTGTGGAACTCGAGTGTGGAGATGAGAGTAGGGTTTCAACAAACGTGGAGACGTGA

Protein sequence

MGSIIHLNAEELRCSEAPLAVWKPFVGWKSFVVPALCCVELECGDESRVSTNVET*
Homology
[Close]
BLAST of Csa7G087710.1 vs. TrEMBL
Match: A0A0A0K3F6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G087710 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.8e-24
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1  MGSIIHLNAEELRCSEAPLAVWKPFVGWKSFVVPALCCVELECGDESRVSTNVET 56
          MGSIIHLNAEELRCSEAPLAVWKPFVGWKSFVVPALCCVELECGDESRVSTNVET
Sbjct: 1  MGSIIHLNAEELRCSEAPLAVWKPFVGWKSFVVPALCCVELECGDESRVSTNVET 55

[Close]
BLAST of Csa7G087710.1 vs. NCBI nr
Match: gi|700188765|gb|KGN43998.1| (hypothetical protein Csa_7G087710 [Cucumis sativus])

HSP 1 Score: 119.0 bits (297), Expect = 2.6e-24
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1  MGSIIHLNAEELRCSEAPLAVWKPFVGWKSFVVPALCCVELECGDESRVSTNVET 56
          MGSIIHLNAEELRCSEAPLAVWKPFVGWKSFVVPALCCVELECGDESRVSTNVET
Sbjct: 1  MGSIIHLNAEELRCSEAPLAVWKPFVGWKSFVVPALCCVELECGDESRVSTNVET 55

The following BLAST results are available for this feature:
BLAST of Csa7G087710.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3F6_CUCSA1.8e-24100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G087710 PE=4 SV=1[more]
BLAST of Csa7G087710.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188765|gb|KGN43998.1|2.6e-24100.00hypothetical protein Csa_7G087710 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa7G087710Csa7G087710gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa7G087710.1Csa7G087710.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa7G087710.1.cds1Csa7G087710.1.cds1CDS
Csa7G087710.1.cds2Csa7G087710.1.cds2CDS