Csa7G085710.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa7G085710.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 5423106 .. 5423346 (-)
Sequence length213
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAGCATAAAACCTTTGAACGCGGAAGCACTTCGTCGTGCGAAAGAGGTTCACAGTGGAAGTCGTTTGTCGTGTAAGTCGTTCACTATGGAAGTCGTTCGTCGTTCGCCGTCCGTCACTCTGTGTTGTGTGGAAGTCGTCCGTCGATTCGAAGAAGTAACCGTCCGCCTATGTTGTGTGAAAGCCGAGCGTGGAGATGAGAGTAGGGTTTCAACGTGGAGACGTGAGAGATTACTAA

mRNA sequence

ATGAGGAGCATAAAACCTTTGAACGCGGAAGCACTTCGTCGTGCGAAAGAGGTTCACAGTGGAAGTCGTTTGTCGTGTAAGTCGTTCACTATGGAAGTCGTTCGTCGTTCGCCGTCCGTCACTCTGTGTTGTGTGGAAGTCGTCCGTCGATTCGAAGAACCGAGCGTGGAGATGAGAGTAGGGTTTCAACGTGGAGACGTGAGAGATTACTAA

Coding sequence (CDS)

ATGAGGAGCATAAAACCTTTGAACGCGGAAGCACTTCGTCGTGCGAAAGAGGTTCACAGTGGAAGTCGTTTGTCGTGTAAGTCGTTCACTATGGAAGTCGTTCGTCGTTCGCCGTCCGTCACTCTGTGTTGTGTGGAAGTCGTCCGTCGATTCGAAGAACCGAGCGTGGAGATGAGAGTAGGGTTTCAACGTGGAGACGTGAGAGATTACTAA

Protein sequence

MRSIKPLNAEALRRAKEVHSGSRLSCKSFTMEVVRRSPSVTLCCVEVVRRFEEPSVEMRVGFQRGDVRDY*
Homology
[Close]
BLAST of Csa7G085710.1 vs. TrEMBL
Match: A0A0A0K6V8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G085710 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 3.3e-31
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1 

Query: 1  MRSIKPLNAEALRRAKEVHSGSRLSCKSFTMEVVRRSPSVTLCCVEVVRRFEEPSVEMRV 60
          MRSIKPLNAEALRRAKEVHSGSRLSCKSFTMEVVRRSPSVTLCCVEVVRRFEEPSVEMRV
Sbjct: 1  MRSIKPLNAEALRRAKEVHSGSRLSCKSFTMEVVRRSPSVTLCCVEVVRRFEEPSVEMRV 60

Query: 61 GFQRGDVRDY 71
          GFQRGDVRDY
Sbjct: 61 GFQRGDVRDY 70

[Close]
BLAST of Csa7G085710.1 vs. NCBI nr
Match: gi|700188764|gb|KGN43997.1| (hypothetical protein Csa_7G085710 [Cucumis sativus])

HSP 1 Score: 141.7 bits (356), Expect = 4.8e-31
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1 

Query: 1  MRSIKPLNAEALRRAKEVHSGSRLSCKSFTMEVVRRSPSVTLCCVEVVRRFEEPSVEMRV 60
          MRSIKPLNAEALRRAKEVHSGSRLSCKSFTMEVVRRSPSVTLCCVEVVRRFEEPSVEMRV
Sbjct: 1  MRSIKPLNAEALRRAKEVHSGSRLSCKSFTMEVVRRSPSVTLCCVEVVRRFEEPSVEMRV 60

Query: 61 GFQRGDVRDY 71
          GFQRGDVRDY
Sbjct: 61 GFQRGDVRDY 70

The following BLAST results are available for this feature:
BLAST of Csa7G085710.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6V8_CUCSA3.3e-31100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G085710 PE=4 SV=1[more]
BLAST of Csa7G085710.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188764|gb|KGN43997.1|4.8e-31100.00hypothetical protein Csa_7G085710 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa7G085710Csa7G085710gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa7G085710.1Csa7G085710.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa7G085710.1.cds2Csa7G085710.1.cds2CDS
Csa7G085710.1.cds1Csa7G085710.1.cds1CDS