Csa7G073580.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa7G073580.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 4914920 .. 4915189 (-)
Sequence length270
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAACAGCAATTTCAAACCGGGTACTGATACTTGGATGCTTGAAAAGACATGCTTCAATTTGATAGAGGAAATGGTTAGGCAAACTATAAACAACCATTTTGATGATACAGAGGTCAAAGATCCAAGCAAACAACCATTAGAATACAGAAGGATCATTTATACAACATATAGCTCAACTCTGCTTTCTGTAAGCTATCTACATACCGGTACTCGAACTTCGTTATCTACAGCTACCAATCTATCTCTAAACTTGAAATCAGATTAG

mRNA sequence

ATGCCAAACAGCAATTTCAAACCGGGTACTGATACTTGGATGCTTGAAAAGACATGCTTCAATTTGATAGAGGAAATGGTTAGGCAAACTATAAACAACCATTTTGATGATACAGAGGTCAAAGATCCAAGCAAACAACCATTAGAATACAGAAGGATCATTTATACAACATATAGCTCAACTCTGCTTTCTGTAAGCTATCTACATACCGGTACTCGAACTTCGTTATCTACAGCTACCAATCTATCTCTAAACTTGAAATCAGATTAG

Coding sequence (CDS)

ATGCCAAACAGCAATTTCAAACCGGGTACTGATACTTGGATGCTTGAAAAGACATGCTTCAATTTGATAGAGGAAATGGTTAGGCAAACTATAAACAACCATTTTGATGATACAGAGGTCAAAGATCCAAGCAAACAACCATTAGAATACAGAAGGATCATTTATACAACATATAGCTCAACTCTGCTTTCTGTAAGCTATCTACATACCGGTACTCGAACTTCGTTATCTACAGCTACCAATCTATCTCTAAACTTGAAATCAGATTAG

Protein sequence

MPNSNFKPGTDTWMLEKTCFNLIEEMVRQTINNHFDDTEVKDPSKQPLEYRRIIYTTYSSTLLSVSYLHTGTRTSLSTATNLSLNLKSD*
Homology
[Close]
BLAST of Csa7G073580.1 vs. TrEMBL
Match: A0A0A0K6J4_CUCSA (Homoserine kinase OS=Cucumis sativus GN=Csa_7G073580 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 7.5e-44
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 1 

Query: 1  MPNSNFKPGTDTWMLEKTCFNLIEEMVRQTINNHFDDTEVKDPSKQPLEYRRIIYTTYSS 60
          MPNSNFKPGTDTWMLEKTCFNLIEEMVRQTINNHFDDTEVKDPSKQPLEYRRIIYTTYSS
Sbjct: 1  MPNSNFKPGTDTWMLEKTCFNLIEEMVRQTINNHFDDTEVKDPSKQPLEYRRIIYTTYSS 60

Query: 61 TLLSVSYLHTGTRTSLSTATNLSLNLKSD 90
          TLLSVSYLHTGTRTSLSTATNLSLNLKSD
Sbjct: 61 TLLSVSYLHTGTRTSLSTATNLSLNLKSD 89

[Close]
BLAST of Csa7G073580.1 vs. NCBI nr
Match: gi|700188689|gb|KGN43922.1| (Homoserine kinase [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 1.1e-43
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 1 

Query: 1  MPNSNFKPGTDTWMLEKTCFNLIEEMVRQTINNHFDDTEVKDPSKQPLEYRRIIYTTYSS 60
          MPNSNFKPGTDTWMLEKTCFNLIEEMVRQTINNHFDDTEVKDPSKQPLEYRRIIYTTYSS
Sbjct: 1  MPNSNFKPGTDTWMLEKTCFNLIEEMVRQTINNHFDDTEVKDPSKQPLEYRRIIYTTYSS 60

Query: 61 TLLSVSYLHTGTRTSLSTATNLSLNLKSD 90
          TLLSVSYLHTGTRTSLSTATNLSLNLKSD
Sbjct: 61 TLLSVSYLHTGTRTSLSTATNLSLNLKSD 89

The following BLAST results are available for this feature:
BLAST of Csa7G073580.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6J4_CUCSA7.5e-44100.00Homoserine kinase OS=Cucumis sativus GN=Csa_7G073580 PE=4 SV=1[more]
BLAST of Csa7G073580.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188689|gb|KGN43922.1|1.1e-43100.00Homoserine kinase [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0016301 kinase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa7G073580Csa7G073580gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa7G073580.1Csa7G073580.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa7G073580.1.cds1Csa7G073580.1.cds1CDS