Csa7G072790.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G072790.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative NtPRp27-like protein; contains IPR007541 (Uncharacterised protein family, basic secretory protein)
Location	Chr7 : 4771681 .. 4772001 (+)
Sequence length	321

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACATATCTGGCAATGGAACGGAAAGGGGGCGGCGCCGGGGTGGTTGATCGAAGGTTTTGCAGATTACATACGACTGCAATCAGGGTACATTCCGAGCCACTGGGTGCCGCCTGGAGGTGGGTCAAATTATACAGATAGTTACGACAAGACAGCAAGATTTATGGACTATTTGGAGAAGAGGACGAGTGGGTTCGTGTCAAAGCTGAATCAAAAGCTCAGAGACGGCTTCTCTCTAGATTACTTTGTGGAGCTGCAGGGAAAGACAGTGGATGAACTGTGGGCGGAGTACAAGGCAGCGTTTGGGAATCGTGATTGA

mRNA sequence

ATGACACATATCTGGCAATGGAACGGAAAGGGGGCGGCGCCGGGGTGGTTGATCGAAGGTTTTGCAGATTACATACGACTGCAATCAGGGTACATTCCGAGCCACTGGGTGCCGCCTGGAGGTGGGTCAAATTATACAGATAGTTACGACAAGACAGCAAGATTTATGGACTATTTGGAGAAGAGGACGAGTGGGTTCGTGTCAAAGCTGAATCAAAAGCTCAGAGACGGCTTCTCTCTAGATTACTTTGTGGAGCTGCAGGGAAAGACAGTGGATGAACTGTGGGCGGAGTACAAGGCAGCGTTTGGGAATCGTGATTGA

Coding sequence (CDS)

ATGACACATATCTGGCAATGGAACGGAAAGGGGGCGGCGCCGGGGTGGTTGATCGAAGGTTTTGCAGATTACATACGACTGCAATCAGGGTACATTCCGAGCCACTGGGTGCCGCCTGGAGGTGGGTCAAATTATACAGATAGTTACGACAAGACAGCAAGATTTATGGACTATTTGGAGAAGAGGACGAGTGGGTTCGTGTCAAAGCTGAATCAAAAGCTCAGAGACGGCTTCTCTCTAGATTACTTTGTGGAGCTGCAGGGAAAGACAGTGGATGAACTGTGGGCGGAGTACAAGGCAGCGTTTGGGAATCGTGATTGA

Protein sequence

MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNRD*

Homology

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BLAST of Csa7G072790.1 vs. TrEMBL
Match: A0A0A0K6G6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G072790 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 6.3e-58
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE
Sbjct: 1   MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60

Query: 61  KRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNRD 107
           KRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNRD
Sbjct: 61  KRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNRD 106

[Close]

BLAST of Csa7G072790.1 vs. TrEMBL
Match: A0A0A0K7U8_CUCSA (NtPRp27-like protein OS=Cucumis sativus GN=Csa_7G072780 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.4e-43
Identity = 80/105 (76.19%), Postives = 92/105 (87.62%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           M H+WQWNG GAAPGWLIEG+ADY+RL++GYIP HWV PGGGS++ + YDKTARFMDYLE
Sbjct: 155 MVHVWQWNGNGAAPGWLIEGYADYVRLKAGYIPGHWVAPGGGSSWMEGYDKTARFMDYLE 214

Query: 61  KRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNR 106
            R SGFVS LN+ LR G+S +YFV+LQGKTV ELWAEYKAAFGNR
Sbjct: 215 GRRSGFVSALNRMLRVGYSPEYFVQLQGKTVAELWAEYKAAFGNR 259

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BLAST of Csa7G072790.1 vs. TrEMBL
Match: A0A0A0K4M0_CUCSA (NtPRp27-like protein OS=Cucumis sativus GN=Csa_7G072810 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.0e-36
Identity = 71/104 (68.27%), Postives = 87/104 (83.65%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           MTHIWQWNG   APG LIEG ADY+RL+SGYIP HWV PGGGS++   YD TARF+DYLE
Sbjct: 124 MTHIWQWNGIPNAPGGLIEGIADYVRLKSGYIPGHWVGPGGGSSWDQGYDVTARFLDYLE 183

Query: 61  KRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGN 105
              SGFV++LN++LR+G+S +YFV+L GK VD+LWA+YKAA+GN
Sbjct: 184 GLRSGFVAELNRRLRNGYSANYFVQLLGKPVDQLWADYKAAYGN 227

[Close]

BLAST of Csa7G072790.1 vs. TrEMBL
Match: A0A061E078_THECC (Plant basic secretory protein (BSP) family protein OS=Theobroma cacao GN=TCM_007156 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.2e-34
Identity = 65/104 (62.50%), Postives = 81/104 (77.88%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           MTHIWQWNG G  PG LIEG AD++RL++ YIPSHWV PG G  +   YD TARF+DY  
Sbjct: 123 MTHIWQWNGNGQTPGGLIEGIADFVRLKANYIPSHWVQPGQGDRWDQGYDVTARFLDYCN 182

Query: 61  KRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGN 105
              +GFV+KLN+K+R G+S +YFVEL GKTVD+LW++YKA +GN
Sbjct: 183 SLRNGFVAKLNKKMRTGYSANYFVELLGKTVDQLWSDYKAKYGN 226

[Close]

BLAST of Csa7G072790.1 vs. TrEMBL
Match: A0A061E155_THECC (Plant basic secretory protein (BSP) family protein OS=Theobroma cacao GN=TCM_007153 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.7e-34
Identity = 65/104 (62.50%), Postives = 81/104 (77.88%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           MTHIWQWNG   APG LIEG AD++RL++ YIPSHWV PG G+ +   YD TARF+DY  
Sbjct: 123 MTHIWQWNGNSQAPGGLIEGIADFVRLKANYIPSHWVQPGQGNRWDQGYDVTARFLDYCN 182

Query: 61  KRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGN 105
              +GFV++LN K+R G+S DYFVEL GKTVD+LW++YKA +GN
Sbjct: 183 SLRNGFVAELNTKMRTGYSADYFVELLGKTVDQLWSDYKAKYGN 226

[Close]

BLAST of Csa7G072790.1 vs. TAIR10
Match: AT2G15220.1 (AT2G15220.1 Plant basic secretory protein (BSP) family protein)

HSP 1 Score: 137.5 bits (345), Expect = 4.8e-33
Identity = 59/103 (57.28%), Postives = 75/103 (72.82%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           + H WQWNG G APG LIEG ADY+RL++GY PSHWV PG G  +   YD TARF+DY  
Sbjct: 122 VVHSWQWNGAGRAPGGLIEGIADYVRLKAGYAPSHWVGPGRGDRWDQGYDVTARFLDYCN 181

Query: 61  KRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFG 104
              +GFV++LN+K+R+G+S  +FV+L GK V++LW EYKA +G
Sbjct: 182 GLRNGFVAELNKKMRNGYSDGFFVDLLGKDVNQLWREYKAKYG 224

[Close]

BLAST of Csa7G072790.1 vs. TAIR10
Match: AT2G15130.1 (AT2G15130.1 Plant basic secretory protein (BSP) family protein)

HSP 1 Score: 133.3 bits (334), Expect = 9.1e-32
Identity = 56/103 (54.37%), Postives = 74/103 (71.84%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           + H WQWNG G APG LIEG ADY+RL++GY+ SHWV PGGG  +   YD TARF++Y  
Sbjct: 122 VVHSWQWNGAGRAPGGLIEGIADYVRLKAGYVASHWVRPGGGDRWDQGYDVTARFLEYCN 181

Query: 61  KRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFG 104
              +GFV++LN+K+R  ++  +FV+L GK V++LW EYKA +G
Sbjct: 182 DLRNGFVAELNKKMRSDYNDGFFVDLLGKDVNQLWREYKANYG 224

[Close]

BLAST of Csa7G072790.1 vs. NCBI nr
Match: gi|778730197|ref|XP_004137102.2| (PREDICTED: uncharacterized protein LOC101216547 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 9.1e-58
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE
Sbjct: 1   MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60

Query: 61  KRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNRD 107
           KRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNRD
Sbjct: 61  KRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNRD 106

[Close]

BLAST of Csa7G072790.1 vs. NCBI nr
Match: gi|449438651|ref|XP_004137101.1| (PREDICTED: uncharacterized protein LOC101216297 [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 4.8e-43
Identity = 80/105 (76.19%), Postives = 92/105 (87.62%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           M H+WQWNG GAAPGWLIEG+ADY+RL++GYIP HWV PGGGS++ + YDKTARFMDYLE
Sbjct: 124 MVHVWQWNGNGAAPGWLIEGYADYVRLKAGYIPGHWVAPGGGSSWMEGYDKTARFMDYLE 183

Query: 61  KRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNR 106
            R SGFVS LN+ LR G+S +YFV+LQGKTV ELWAEYKAAFGNR
Sbjct: 184 GRRSGFVSALNRMLRVGYSPEYFVQLQGKTVAELWAEYKAAFGNR 228

[Close]

BLAST of Csa7G072790.1 vs. NCBI nr
Match: gi|700188658|gb|KGN43891.1| (NtPRp27-like protein [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 4.8e-43
Identity = 80/105 (76.19%), Postives = 92/105 (87.62%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           M H+WQWNG GAAPGWLIEG+ADY+RL++GYIP HWV PGGGS++ + YDKTARFMDYLE
Sbjct: 155 MVHVWQWNGNGAAPGWLIEGYADYVRLKAGYIPGHWVAPGGGSSWMEGYDKTARFMDYLE 214

Query: 61  KRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNR 106
            R SGFVS LN+ LR G+S +YFV+LQGKTV ELWAEYKAAFGNR
Sbjct: 215 GRRSGFVSALNRMLRVGYSPEYFVQLQGKTVAELWAEYKAAFGNR 259

[Close]

BLAST of Csa7G072790.1 vs. NCBI nr
Match: gi|449438369|ref|XP_004136961.1| (PREDICTED: uncharacterized protein LOC101221124 [Cucumis sativus])

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-36
Identity = 71/104 (68.27%), Postives = 87/104 (83.65%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           MTHIWQWNG   APG LIEG ADY+RL+SGYIP HWV PGGGS++   YD TARF+DYLE
Sbjct: 124 MTHIWQWNGIPNAPGGLIEGIADYVRLKSGYIPGHWVGPGGGSSWDQGYDVTARFLDYLE 183

Query: 61  KRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGN 105
              SGFV++LN++LR+G+S +YFV+L GK VD+LWA+YKAA+GN
Sbjct: 184 GLRSGFVAELNRRLRNGYSANYFVQLLGKPVDQLWADYKAAYGN 227

[Close]

BLAST of Csa7G072790.1 vs. NCBI nr
Match: gi|659109990|ref|XP_008454989.1| (PREDICTED: uncharacterized protein LOC103495269 [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-34
Identity = 69/104 (66.35%), Postives = 87/104 (83.65%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           MTHIWQWNG   APG LIEG ADYIRL+SGYIP+HWV PGGGS++   YD TARF+DYLE
Sbjct: 124 MTHIWQWNGIPNAPGGLIEGIADYIRLKSGYIPNHWVGPGGGSSWDQGYDVTARFLDYLE 183

Query: 61  KRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGN 105
             +SGFV++LN++L+ G+S +YFV+L  K VD+LWA+YKAA+G+
Sbjct: 184 GLSSGFVAELNRRLKYGYSANYFVQLLEKPVDQLWADYKAAYGH 227

The following BLAST results are available for this feature:

BLAST of Csa7G072790.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6G6_CUCSA	6.3e-58	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G072790 PE=4 SV=1	[more]
A0A0A0K7U8_CUCSA	3.4e-43	76.19	NtPRp27-like protein OS=Cucumis sativus GN=Csa_7G072780 PE=4 SV=1	[more]
A0A0A0K4M0_CUCSA	1.0e-36	68.27	NtPRp27-like protein OS=Cucumis sativus GN=Csa_7G072810 PE=4 SV=1	[more]
A0A061E078_THECC	2.2e-34	62.50	Plant basic secretory protein (BSP) family protein OS=Theobroma cacao GN=TCM_007...	[more]
A0A061E155_THECC	3.7e-34	62.50	Plant basic secretory protein (BSP) family protein OS=Theobroma cacao GN=TCM_007...	[more]

BLAST of Csa7G072790.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G15220.1	4.8e-33	57.28	Plant basic secretory protein (BSP) family protein	[more]
AT2G15130.1	9.1e-32	54.37	Plant basic secretory protein (BSP) family protein	[more]

BLAST of Csa7G072790.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778730197\|ref\|XP_004137102.2\|	9.1e-58	100.00	PREDICTED: uncharacterized protein LOC101216547 [Cucumis sativus]	[more]
gi\|449438651\|ref\|XP_004137101.1\|	4.8e-43	76.19	PREDICTED: uncharacterized protein LOC101216297 [Cucumis sativus]	[more]
gi\|700188658\|gb\|KGN43891.1\|	4.8e-43	76.19	NtPRp27-like protein [Cucumis sativus]	[more]
gi\|449438369\|ref\|XP_004136961.1\|	1.5e-36	68.27	PREDICTED: uncharacterized protein LOC101221124 [Cucumis sativus]	[more]
gi\|659109990\|ref\|XP_008454989.1\|	1.1e-34	66.35	PREDICTED: uncharacterized protein LOC103495269 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007541	Uncharacterised_BSP

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa7G072790	Csa7G072790	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa7G072790.1	Csa7G072790.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa7G072790.1.cds1	Csa7G072790.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007541	Uncharacterised protein family, basic secretory protein	PFAM	PF04450	BSP	coord: 1..98 score: 2.6
None	No IPR available	PANTHER	PTHR33321	FAMILY NOT NAMED	coord: 1..106 score: 1.1