Csa7G033360.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa7G033360.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 1863880 .. 1865315 (-)
Sequence length411
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATTAAGAAGCGGAAGCTTGTGCGTTACCAAACAACGGCCTTAGAATATGCTCTTAGCTGTTATCAACTTTACCGGGAACTTCATCGGAGCCGGAGCACCAATCACTGCTTCTCAACTCTAACCATTTCAATTCCTTCTCTCTCTATCTTCTTCTTCTTCTTCTTCCTCCTCCTCTTCTTCTTCCTCTTCCCGGTATCTTCTCTCTTTTCTTCTTCATCGGAGCTTCAATTTGACTTCAATTTCTTTGTCTCCTTACCCACTTCCCTCGTCTTCTGCACCTCTGATTCGCCTGCTCCAATTCCGAACCCGGACTTGTATTTGACGGCTGTGATTGATTTCTAGCGGAATTCTGTGCTTCCACCTCAAATTACTACACCTTTGTGATTTTCTAGGGCTTCAAACTCCAAGCCTTTGGCACTGAACCGGAGGTAGAGCTTTTTTCCCTTTCTCATGTCTAACTCAATATTATTGTTGTAAATTTTTTTTTTGGGGGGAGGGAGATAACAGATAAGTATGTGGATATTTTTCTCTTGTTTCTGAAATTGAAGGCGGAGTTTTGTGATTTGGATCTTAATTATTTTGATCCGTACTGGAGCCGGAGAATCTAGTTACTCAGCTCAAGCTGAGCCTACTTGGTCCGTATGTTTTGGATGAAATTAGTAGCTAATTCTTTTTCTTCTCTTTATAAGCTTTAGTTGGAGTGAGAGTTTTACTTTGAACACCATTGTTTCTTTGTTCGCCTCGAAGATTTCATCGGATGGTGTGCAAGTGGTGGATTATTGTGCACTGAATTCGATTTCCATGTCTATTCTTTTTTCTATTAAAAAATTTTGGTTATTAATTGAGAATGAAGATTATTTCCATGTATTGAATAATATATATCTTATCCCACTTCCCGAAACTTTTAAATGTTCAATATTTTGATTTTAGTACGGTATATTTTCGAAGTCAATCCTTCTTCTATATTGTAAATTATAGTAGTCTGAATCAACTCTGACACTCTAGTTTCCATTTTTTTTTTTTGGGGAGGGGGGGTTCTTGGGCTAAACTGAAATTTCCACTTTTCATGCGTACAAACACATTTTCATATTAGAAACAGCTTGGGGTTATATAATGCATGAATTTGGGGATGCTGAGTATGCATGAAATCTTCACGTTTTCTTTATGACCATGACTATGAAGTTTGAAGTAAATTGTCTACGCACACAATGACACGATCATTCTCGAATAATATTAATAAATTGTTTGTTTGATATCTGGCCTCTTGAATTTTGATTATATGGAGGTAGTCCAAAATGACTTTTAGCAATTTTCCATTTTGTTGCATTTCTTACCAGGATTCAGTATACAGCTAGACGTGACGTGGGATCCAGTTTCTGTGTCAATCAAATTGTGGAGAATAAGAGTTCTTTAGAGCTCTCTGGTTTATGA

mRNA sequence

ATGGCATTAAGAAGCGGAAGCTTCTGTTATCAACTTTACCGGGAACTTCATCGGAGCCGGAGCACCAATCACTGCTTCTCAACTCTAACCATTTCAATTCCTTCTCTCTCTATCTTCTTCTTCTTCTTCTTCCTCCTCCTCTTCTTCTTCCTCTTCCCGGTATCTTCTCTCTTTTCTTCTTCATCGGAGCTTCAATTTGACTTCAATTTCTTTGTCTCCTTACCCACTTCCCTCGTCTTCTGCACCTCTGATTCGCCTGCTCCAATTCCGAACCCGGACTTGGCTTCAAACTCCAAGCCTTTGGCACTGAACCGGAGGATTCAGTATACAGCTAGACGTGACGTGGGATCCAGTTTCTGTGTCAATCAAATTGTGGAGAATAAGAGTTCTTTAGAGCTCTCTGGTTTATGA

Coding sequence (CDS)

ATGGCATTAAGAAGCGGAAGCTTCTGTTATCAACTTTACCGGGAACTTCATCGGAGCCGGAGCACCAATCACTGCTTCTCAACTCTAACCATTTCAATTCCTTCTCTCTCTATCTTCTTCTTCTTCTTCTTCCTCCTCCTCTTCTTCTTCCTCTTCCCGGTATCTTCTCTCTTTTCTTCTTCATCGGAGCTTCAATTTGACTTCAATTTCTTTGTCTCCTTACCCACTTCCCTCGTCTTCTGCACCTCTGATTCGCCTGCTCCAATTCCGAACCCGGACTTGGCTTCAAACTCCAAGCCTTTGGCACTGAACCGGAGGATTCAGTATACAGCTAGACGTGACGTGGGATCCAGTTTCTGTGTCAATCAAATTGTGGAGAATAAGAGTTCTTTAGAGCTCTCTGGTTTATGA

Protein sequence

MALRSGSFCYQLYRELHRSRSTNHCFSTLTISIPSLSIFFFFFFLLLFFFLFPVSSLFSSSSELQFDFNFFVSLPTSLVFCTSDSPAPIPNPDLASNSKPLALNRRIQYTARRDVGSSFCVNQIVENKSSLELSGL*
Homology
[Close]
BLAST of Csa7G033360.1 vs. TrEMBL
Match: A0A0A0K1U7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G033360 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 2.4e-70
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MALRSGSFCYQLYRELHRSRSTNHCFSTLTISIPSLSIFFFFFFLLLFFFLFPVSSLFSS 60
           MALRSGSFCYQLYRELHRSRSTNHCFSTLTISIPSLSIFFFFFFLLLFFFLFPVSSLFSS
Sbjct: 1   MALRSGSFCYQLYRELHRSRSTNHCFSTLTISIPSLSIFFFFFFLLLFFFLFPVSSLFSS 60

Query: 61  SSELQFDFNFFVSLPTSLVFCTSDSPAPIPNPDLASNSKPLALNRRIQYTARRDVGSSFC 120
           SSELQFDFNFFVSLPTSLVFCTSDSPAPIPNPDLASNSKPLALNRRIQYTARRDVGSSFC
Sbjct: 61  SSELQFDFNFFVSLPTSLVFCTSDSPAPIPNPDLASNSKPLALNRRIQYTARRDVGSSFC 120

Query: 121 VNQIVENKSSLELSGL 137
           VNQIVENKSSLELSGL
Sbjct: 121 VNQIVENKSSLELSGL 136

[Close]
BLAST of Csa7G033360.1 vs. NCBI nr
Match: gi|700188195|gb|KGN43428.1| (hypothetical protein Csa_7G033360 [Cucumis sativus])

HSP 1 Score: 272.7 bits (696), Expect = 3.5e-70
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MALRSGSFCYQLYRELHRSRSTNHCFSTLTISIPSLSIFFFFFFLLLFFFLFPVSSLFSS 60
           MALRSGSFCYQLYRELHRSRSTNHCFSTLTISIPSLSIFFFFFFLLLFFFLFPVSSLFSS
Sbjct: 1   MALRSGSFCYQLYRELHRSRSTNHCFSTLTISIPSLSIFFFFFFLLLFFFLFPVSSLFSS 60

Query: 61  SSELQFDFNFFVSLPTSLVFCTSDSPAPIPNPDLASNSKPLALNRRIQYTARRDVGSSFC 120
           SSELQFDFNFFVSLPTSLVFCTSDSPAPIPNPDLASNSKPLALNRRIQYTARRDVGSSFC
Sbjct: 61  SSELQFDFNFFVSLPTSLVFCTSDSPAPIPNPDLASNSKPLALNRRIQYTARRDVGSSFC 120

Query: 121 VNQIVENKSSLELSGL 137
           VNQIVENKSSLELSGL
Sbjct: 121 VNQIVENKSSLELSGL 136

The following BLAST results are available for this feature:
BLAST of Csa7G033360.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K1U7_CUCSA2.4e-70100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G033360 PE=4 SV=1[more]
BLAST of Csa7G033360.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188195|gb|KGN43428.1|3.5e-70100.00hypothetical protein Csa_7G033360 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa7G033360Csa7G033360gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa7G033360.1Csa7G033360.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa7G033360.1.cds4Csa7G033360.1.cds4CDS
Csa7G033360.1.cds3Csa7G033360.1.cds3CDS
Csa7G033360.1.cds2Csa7G033360.1.cds2CDS
Csa7G033360.1.cds1Csa7G033360.1.cds1CDS