Csa7G027780.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa7G027780.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 1475092 .. 1475389 (+)
Sequence length174
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGCCTCGATGAGAAACGCCAACGCCAACGCCAACGCCAACTCACAGTCAAAAAGGAGGTTGTAGTGATTAGTGTTCGGAACGAGAGCAATGTAGGTAGGTTGCATAAGCGAGTGATTATTCTTCATCAAACTCTCTTGGACAGTTGCATAAAAAGTTTGATAATTTTATGTGGAACAATAATGGTGCAAAGCATATGATTGTTTGGTTGATATGAAAGATTTGAGAGCTGCAGAAGATGTTGATAATGTTATTAGGGATGTGAGGATCAAGAGGAGAGGAAAGGAAGGATAG

mRNA sequence

ATGGGTGGCCTCGATGAGAAACGCCAACGCCAACGCCAACGCCAACTCACAGTCAAAAAGGAGGTTGTAGTGATTAGTGTTCGGAACGAGAGCAATGTAGATTTGAGAGCTGCAGAAGATGTTGATAATGTTATTAGGGATGTGAGGATCAAGAGGAGAGGAAAGGAAGGATAG

Coding sequence (CDS)

ATGGGTGGCCTCGATGAGAAACGCCAACGCCAACGCCAACGCCAACTCACAGTCAAAAAGGAGGTTGTAGTGATTAGTGTTCGGAACGAGAGCAATGTAGATTTGAGAGCTGCAGAAGATGTTGATAATGTTATTAGGGATGTGAGGATCAAGAGGAGAGGAAAGGAAGGATAG

Protein sequence

MGGLDEKRQRQRQRQLTVKKEVVVISVRNESNVDLRAAEDVDNVIRDVRIKRRGKEG*
Homology
[Close]
BLAST of Csa7G027780.1 vs. TrEMBL
Match: A0A0A0K4Z1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G027780 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 3.0e-22
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1 

Query: 1  MGGLDEKRQRQRQRQLTVKKEVVVISVRNESNVDLRAAEDVDNVIRDVRIKRRGKEG 58
          MGGLDEKRQRQRQRQLTVKKEVVVISVRNESNVDLRAAEDVDNVIRDVRIKRRGKEG
Sbjct: 1  MGGLDEKRQRQRQRQLTVKKEVVVISVRNESNVDLRAAEDVDNVIRDVRIKRRGKEG 57

[Close]
BLAST of Csa7G027780.1 vs. NCBI nr
Match: gi|700188129|gb|KGN43362.1| (hypothetical protein Csa_7G027780 [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 4.3e-22
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1 

Query: 1  MGGLDEKRQRQRQRQLTVKKEVVVISVRNESNVDLRAAEDVDNVIRDVRIKRRGKEG 58
          MGGLDEKRQRQRQRQLTVKKEVVVISVRNESNVDLRAAEDVDNVIRDVRIKRRGKEG
Sbjct: 1  MGGLDEKRQRQRQRQLTVKKEVVVISVRNESNVDLRAAEDVDNVIRDVRIKRRGKEG 57

The following BLAST results are available for this feature:
BLAST of Csa7G027780.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4Z1_CUCSA3.0e-22100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G027780 PE=4 SV=1[more]
BLAST of Csa7G027780.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188129|gb|KGN43362.1|4.3e-22100.00hypothetical protein Csa_7G027780 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa7G027780Csa7G027780gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa7G027780.1Csa7G027780.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa7G027780.1.cds1Csa7G027780.1.cds1CDS
Csa7G027780.1.cds2Csa7G027780.1.cds2CDS