Csa6G445220.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCTATCCATGGCTGCTTTCCCTTTCACGGAGCTTTACTCGCCTTCTTACCAGAAGTGCGCGACAATGGAGAAGATGACGGCTTCATGGACTTAGGATCTTCCCTTCGCTCATCGATTGCAAAGCGTCTTTGGCCTTTACAACTCATAAGCTAAACTTCACCATCTTCCTCCCTCTGTTGCCTTGGCTCGCCTGCGACCGATTAGGGTTCTGAATTGTGGAGTGAATGTAAAACTACTTTTTGTTTAATCCTACTGATTGAGCTCTTGGATCGCTGTACAACGCGATGAACGTGAGCCGGCCTTCGGTGCATCCGGTGGAGGCGCCACCACTTACGGAAGGAGCGGTACACAATGGGCCGAGAGTGAGGATGAAGGATGTACAGGGCATGCCTGGAACACTAGGTGGACTTGCTCTTCGTCTTCTTCAGTTCGTTTTTGCTACGGTTTCTCTCTGTGTTATGTCTACCACCAGTGATTTCCCTTCCGTCACGGCGTTTCGGTACGTAGTTCTTTAATTTTGGTTTTCTAGTATCCGACTTGGAGGAGCTTTTCGATGTTTTGATTGTTATAATCTCTAAACGTTACGTTACAGAGTCAATGAACTGAAATTAGGATGCTGATTAAATAAAGATATGTTTAGCGTGATTTGGACGTCTTTTGGAATATTTTATCGTAAAGAATGCGTGTTTTTTCGTATTTTGTTGCTAATTATTCTGCTAAAGTACAATTGTTTGGTAATTGTGTCTGTATTCTTAGAAATGAAATTTAGCCTCTGTTCATGGTGACAGGGATAGCTAATAGCAATAACTTGTAATCACACTATCGCTGAGGTCTTGTAATTTATATGTGTTGCGAGTCGTAATGGAGCCCCCGGGCATCGACGGAAATCCATATAGCCATGTCAAAACGTTATCGCGTTAACTTTCGAGTGTGTTCTAGAAGAAGAAAACCACGAAATGTGTCATTCAGTATGTTCGTTTAGGATTCGAGTGATTTTATTACGATTTGTGTTGTATTATTTTCCCAACCGAGTGGTTAAGAAGTGCATTCGTAATTCACTCGTAATTGCTATTTTGTTTAAGAAAATAGAGCATTTGTTGTTGCTCGATTATTCATCCCGTAATCAAGTTCATATTTCATATGGAATAAATTGTTTTCCATATGTTTCATATCAGTTCCGTTTTGTGAACAAGATTTGTATTGATTTATAGTTTACCTTTACCATATTTCATCACTCTGTTAATACCAACAGGAGTTTTTCCCATCCTTGGTTGGTTTTTTTAAGTTGGGAGGATATCTTATTTTCTTCTCTCGTACATACGTTTATGATTCCAAAAACTGAAATGTAGCCACTCTTTTGAAAGAAGTTTGTGCTGTTGGCTAATGTTACTCATGGTCAAAACTTATGATTTTAGGGTATTCTGTATGTTTTTTTTACGTGAGATATTCTGTATGTTTGATCCTTCAAATTTGTGTTCAATTGTTCATATGGAATTATTTTGCCTATGATTTCTCTCAGATATCTTGTTGCTGCTGTTGGCTTGCAATGCTTGTGGAGTTTTTCATTAGCAGTAGTTGATGCATATGCCTTGTTAGTCAGACGAAGCTTGCGGAACTGCTCAATAGTTGGTTTGTTCACCCTTGGTGATGCTGTAAGAATATTTTGCTTGCTACACTTTGGAATTCACATAATACATCTGTATGCATCTTAGATTTGTAGCCTGATATATCATGTGCAATGCAGAATCTTGTTAAAGTCTGCACAATGCTCATAGAATAGGTCAAAAAAATCTTTGATTGAAATTTAATATTTAACTATTTTTTGGGTACTAAGATTATACTTGGTTTGCAAGAATCGTGGTGAGAAATGAGAACCGAAGGGAGACTTCTTGTCTAATAATTGGGTGTGCCCATCTGTGATTTGCAATAGAATAAGGGTCGCTGGGTCTTTCATTATGAAGGAACGAACCTAATACTCTAAATTATATCAATGCTTTATTTTTATTATTAATATTAATTTATATGTTATTCTTATCATGATAATGTAATATGATATTTATTCTTATCGATTCAATTATGATAATTTCAATCTATGTTCTTATAATTAAATAAATTTGTTGAACCAATAAAACTTTATTGAAATTAATTTCTTGAGTTCAATTAGTATTTATAATTGTTGATATAAATAAGGAGTCGTGTTGTCCTGCAGGTTACGTCCACCCTTACATTTTCTGCTGCGTGTTCCTCAGCAGGGATTACCGTTCTTATAGGCAATGACCTTAACAAGTGTGGCGTGAACCACTGTGCACAGTTTGAGTCCGCCACTGCAATGGCTTTCATTAGCTGGTTTGCTGTTTCTCCTTCGTTTCTCTTGAACTTTTGGTCATTAGCTTCTCGGTGAGATTCCACTGCCAGAAAATTAGCCTCTTTTTAGTTTTTGTCTCACCAACTACCCTTTGCTTCTAAATTAGTACAAAATTGGAAATTTGATGTACACATGTAGGTTTTTTGCTGGGTTTGATTGAGAATTGAGAGATAATAATATAAGTGAATAAAATCACCTTCGTTTTGATTAGAAATATGTATAT ATGAACGTGAGCCGGCCTTCGGTGCATCCGGTGGAGGCGCCACCACTTACGGAAGGAGCGGTACACAATGGGCCGAGAGTGAGGATGAAGGATGTACAGGGCATGCCTGGAACACTAGGTGGACTTGCTCTTCGTCTTCTTCAGTTCGTTTTTGCTACGGTTTCTCTCTGTGTTATGTCTACCACCAGTGATTTCCCTTCCGTCACGGCGTTTCGATATCTTGTTGCTGCTGTTGGCTTGCAATGCTTGTGGAGTTTTTCATTAGCAGTAGTTGATGCATATGCCTTGTTAGTCAGACGAAGCTTGCGGAACTGCTCAATAGTTGGTTTGTTCACCCTTGGTGATGCTGTTACGTCCACCCTTACATTTTCTGCTGCGTGTTCCTCAGCAGGGATTACCGTTCTTATAGGCAATGACCTTAACAAGTGTGGCGTGAACCACTGTGCACAGTTTGAGTCCGCCACTGCAATGGCTTTCATTAGCTGGTTTGCTGTTTCTCCTTCGTTTCTCTTGAACTTTTGGTCATTAGCTTCTCGGTGA ATGAACGTGAGCCGGCCTTCGGTGCATCCGGTGGAGGCGCCACCACTTACGGAAGGAGCGGTACACAATGGGCCGAGAGTGAGGATGAAGGATGTACAGGGCATGCCTGGAACACTAGGTGGACTTGCTCTTCGTCTTCTTCAGTTCGTTTTTGCTACGGTTTCTCTCTGTGTTATGTCTACCACCAGTGATTTCCCTTCCGTCACGGCGTTTCGATATCTTGTTGCTGCTGTTGGCTTGCAATGCTTGTGGAGTTTTTCATTAGCAGTAGTTGATGCATATGCCTTGTTAGTCAGACGAAGCTTGCGGAACTGCTCAATAGTTGGTTTGTTCACCCTTGGTGATGCTGTTACGTCCACCCTTACATTTTCTGCTGCGTGTTCCTCAGCAGGGATTACCGTTCTTATAGGCAATGACCTTAACAAGTGTGGCGTGAACCACTGTGCACAGTTTGAGTCCGCCACTGCAATGGCTTTCATTAGCTGGTTTGCTGTTTCTCCTTCGTTTCTCTTGAACTTTTGGTCATTAGCTTCTCGGTGA MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMSTTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTSTLTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR*
BLAST of Csa6G445220.1 vs. Swiss-Prot
Match: CSPL6_ARATH (CASP-like protein 5A2 OS=Arabidopsis thaliana GN=At2g28370 PE=2 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 7.3e-68 Identity = 126/179 (70.39%), Postives = 143/179 (79.89%), Query Frame = 1
BLAST of Csa6G445220.1 vs. Swiss-Prot
Match: CSPL2_GINBI (CASP-like protein 5A1 OS=Ginkgo biloba GN=gba_locus_10451 PE=3 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 1.4e-66 Identity = 126/179 (70.39%), Postives = 143/179 (79.89%), Query Frame = 1
BLAST of Csa6G445220.1 vs. Swiss-Prot
Match: CSPL1_BRADI (CASP-like protein 5A1 OS=Brachypodium distachyon PE=2 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 3.2e-63 Identity = 122/179 (68.16%), Postives = 141/179 (78.77%), Query Frame = 1
BLAST of Csa6G445220.1 vs. Swiss-Prot
Match: CSPLV_ORYSJ (CASP-like protein 5A1 OS=Oryza sativa subsp. japonica GN=Os03g0206600 PE=2 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 5.4e-63 Identity = 124/179 (69.27%), Postives = 142/179 (79.33%), Query Frame = 1
BLAST of Csa6G445220.1 vs. Swiss-Prot
Match: CSPL9_ARATH (CASP-like protein 5A1 OS=Arabidopsis thaliana GN=At2g37200 PE=2 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 5.4e-63 Identity = 129/180 (71.67%), Postives = 145/180 (80.56%), Query Frame = 1
BLAST of Csa6G445220.1 vs. TrEMBL
Match: A0A0A0KF35_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_6G445220 PE=3 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 9.8e-96 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1
BLAST of Csa6G445220.1 vs. TrEMBL
Match: M5VZW4_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa010839mg PE=3 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 6.6e-76 Identity = 143/179 (79.89%), Postives = 156/179 (87.15%), Query Frame = 1
BLAST of Csa6G445220.1 vs. TrEMBL
Match: M5WCK6_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa010839mg PE=3 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 6.6e-76 Identity = 143/179 (79.89%), Postives = 156/179 (87.15%), Query Frame = 1
BLAST of Csa6G445220.1 vs. TrEMBL
Match: F6HNG2_VITVI (CASP-like protein OS=Vitis vinifera GN=VIT_13s0019g04330 PE=3 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 1.1e-73 Identity = 139/179 (77.65%), Postives = 155/179 (86.59%), Query Frame = 1
BLAST of Csa6G445220.1 vs. TrEMBL
Match: A0A0D2V9Q3_GOSRA (CASP-like protein OS=Gossypium raimondii GN=B456_013G027400 PE=3 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 4.4e-72 Identity = 139/178 (78.09%), Postives = 155/178 (87.08%), Query Frame = 1
BLAST of Csa6G445220.1 vs. TAIR10
Match: AT2G28370.1 (AT2G28370.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 258.1 bits (658), Expect = 4.1e-69 Identity = 126/179 (70.39%), Postives = 143/179 (79.89%), Query Frame = 1
BLAST of Csa6G445220.1 vs. TAIR10
Match: AT2G37200.1 (AT2G37200.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 241.9 bits (616), Expect = 3.1e-64 Identity = 129/180 (71.67%), Postives = 145/180 (80.56%), Query Frame = 1
BLAST of Csa6G445220.1 vs. TAIR10
Match: AT3G23200.1 (AT3G23200.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 137.1 bits (344), Expect = 1.1e-32 Identity = 72/151 (47.68%), Postives = 97/151 (64.24%), Query Frame = 1
BLAST of Csa6G445220.1 vs. TAIR10
Match: AT3G53850.1 (AT3G53850.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 129.8 bits (325), Expect = 1.7e-30 Identity = 68/153 (44.44%), Postives = 95/153 (62.09%), Query Frame = 1
BLAST of Csa6G445220.1 vs. TAIR10
Match: AT5G02060.1 (AT5G02060.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 122.9 bits (307), Expect = 2.1e-28 Identity = 66/151 (43.71%), Postives = 91/151 (60.26%), Query Frame = 1
BLAST of Csa6G445220.1 vs. NCBI nr
Match: gi|449451006|ref|XP_004143253.1| (PREDICTED: CASP-like protein 5A2 [Cucumis sativus]) HSP 1 Score: 357.5 bits (916), Expect = 1.4e-95 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1
BLAST of Csa6G445220.1 vs. NCBI nr
Match: gi|645277787|ref|XP_008243939.1| (PREDICTED: CASP-like protein 2 [Prunus mume]) HSP 1 Score: 293.9 bits (751), Expect = 1.9e-76 Identity = 144/179 (80.45%), Postives = 157/179 (87.71%), Query Frame = 1
BLAST of Csa6G445220.1 vs. NCBI nr
Match: gi|595829163|ref|XP_007205818.1| (hypothetical protein PRUPE_ppa010839mg [Prunus persica]) HSP 1 Score: 291.6 bits (745), Expect = 9.5e-76 Identity = 143/179 (79.89%), Postives = 156/179 (87.15%), Query Frame = 1
BLAST of Csa6G445220.1 vs. NCBI nr
Match: gi|595829168|ref|XP_007205819.1| (hypothetical protein PRUPE_ppa010839mg [Prunus persica]) HSP 1 Score: 291.6 bits (745), Expect = 9.5e-76 Identity = 143/179 (79.89%), Postives = 156/179 (87.15%), Query Frame = 1
BLAST of Csa6G445220.1 vs. NCBI nr
Match: gi|702499433|ref|XP_010037966.1| (PREDICTED: CASP-like protein 5A2 isoform X1 [Eucalyptus grandis]) HSP 1 Score: 290.4 bits (742), Expect = 2.1e-75 Identity = 141/178 (79.21%), Postives = 155/178 (87.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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