Csa6G421800.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G421800.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Gb\|AAC79135.1
Location	Chr6 : 19538655 .. 19539913 (-)
Sequence length	924

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCTTCTTCTTCTTCTTCTGCACTAGCTTGAACAAAAATACAGAAGTTTGATCCAAACTAATCCAATGGATACGAAGCACAAAGAAATGCAGTTCCTTGGAGCCTTCCGAATCTTCAAAGAAACCTACAAAATTATCAGCAAAAACAAAAAGATATTTGCCATGGCAGCTCTTTGCTTCATCCACCCTCTAAACTTCGTTCTTTCAGGCTTAATGTTGACCTTGAATAACATCCTAAGAAACCTCCACGATTATGGGAATACATCACATCTCTTCTCCAGCCATTATATGTTCATCGCTTGGCCCTACGACATCATATCCATCTTTTTCCTTTTTGGTTGGTCTATCTTATCCACCGCCGGTGTGTCTCAAACCGTCGCCACCTTATACACCGGCCAAGAACCGTCCATTAATGACACAATGAGCGTGGTAGTCACGGTTTGGAAGCGTCTTCTCGTCACGTTTCTTTGTGTTATTCTGGTTTTCTTGATATATCATATGATAGTTGGACTTGCTTTGTTCATCATTATTTTGCCATTAGGGGAAGTTGATAGAACAACTTTGGGTGTGGCTTTTCTTTTTTATTTTATTGGGTTGTTTTATTTGGTAGTGGTGTTACAATTGGCTGGCGTTGTTTCTGTGTTGGAAGAGTCTCGTGGGTTTAAAGCCATGGAGAATAGTAGGTTGCTCTTGAAGGAAAATATGGTATCTGCCACAGTCATCGTGTTGACGATTTATTCTGGTTTTGGGATTTTACTATGGCTAAAGGCTCTTACTAAAAAGATGCTTTTTTCACCATCAACGGTGCCTATTTGGATGTATTTGTTGGGCAGCTTGTCGTTAGACTTTTTGATTTTGGTTTTCCTATTATGGAGGCTTGTGTCAGAGACAATGATCTATTTAGTGTGTAAATCATATAACCATGAGAGTATCGACAAGACGACTCTCTCAGATCCTGATCCAGTTCTCTTAAGAAGCTCAGAGTGTTAATTGTTTATTTCTATTGTGACATAAATATATGTATGTGATATTTAATCGGTAAAACACCAATGTAGTTTCATGAAAAATATAAGTCTGTTGAGATTGGAAACTCTCTATTCTCTTTCAACTATTATGCTCCAGTGTGTATGTCCTTGATGAACTTTATGGTTTTACCCCAATTTCTGTGAGGAAATAAATAAGAATGGTTTGTATGTTTTTTTACGAGGAAGTATTGAATTTGGATTTTATTTAATCATAATGTTAAAATGATTGGCC

mRNA sequence

ATGGATACGAAGCACAAAGAAATGCAGTTCCTTGGAGCCTTCCGAATCTTCAAAGAAACCTACAAAATTATCAGCAAAAACAAAAAGATATTTGCCATGGCAGCTCTTTGCTTCATCCACCCTCTAAACTTCGTTCTTTCAGGCTTAATGTTGACCTTGAATAACATCCTAAGAAACCTCCACGATTATGGGAATACATCACATCTCTTCTCCAGCCATTATATGTTCATCGCTTGGCCCTACGACATCATATCCATCTTTTTCCTTTTTGGTTGGTCTATCTTATCCACCGCCGGTGTGTCTCAAACCGTCGCCACCTTATACACCGGCCAAGAACCGTCCATTAATGACACAATGAGCGTGGTAGTCACGGTTTGGAAGCGTCTTCTCGTCACGTTTCTTTGTGTTATTCTGGTTTTCTTGATATATCATATGATAGTTGGACTTGCTTTGTTCATCATTATTTTGCCATTAGGGGAAGTTGATAGAACAACTTTGGGTGTGGCTTTTCTTTTTTATTTTATTGGGTTGTTTTATTTGGTAGTGGTGTTACAATTGGCTGGCGTTGTTTCTGTGTTGGAAGAGTCTCGTGGGTTTAAAGCCATGGAGAATAGTAGGTTGCTCTTGAAGGAAAATATGGTATCTGCCACAGTCATCGTGTTGACGATTTATTCTGGTTTTGGGATTTTACTATGGCTAAAGGCTCTTACTAAAAAGATGCTTTTTTCACCATCAACGGTGCCTATTTGGATGTATTTGTTGGGCAGCTTGTCGTTAGACTTTTTGATTTTGGTTTTCCTATTATGGAGGCTTGTGTCAGAGACAATGATCTATTTAGTGTGTAAATCATATAACCATGAGAGTATCGACAAGACGACTCTCTCAGATCCTGATCCAGTTCTCTTAAGAAGCTCAGAGTGTTAA

Coding sequence (CDS)

ATGGATACGAAGCACAAAGAAATGCAGTTCCTTGGAGCCTTCCGAATCTTCAAAGAAACCTACAAAATTATCAGCAAAAACAAAAAGATATTTGCCATGGCAGCTCTTTGCTTCATCCACCCTCTAAACTTCGTTCTTTCAGGCTTAATGTTGACCTTGAATAACATCCTAAGAAACCTCCACGATTATGGGAATACATCACATCTCTTCTCCAGCCATTATATGTTCATCGCTTGGCCCTACGACATCATATCCATCTTTTTCCTTTTTGGTTGGTCTATCTTATCCACCGCCGGTGTGTCTCAAACCGTCGCCACCTTATACACCGGCCAAGAACCGTCCATTAATGACACAATGAGCGTGGTAGTCACGGTTTGGAAGCGTCTTCTCGTCACGTTTCTTTGTGTTATTCTGGTTTTCTTGATATATCATATGATAGTTGGACTTGCTTTGTTCATCATTATTTTGCCATTAGGGGAAGTTGATAGAACAACTTTGGGTGTGGCTTTTCTTTTTTATTTTATTGGGTTGTTTTATTTGGTAGTGGTGTTACAATTGGCTGGCGTTGTTTCTGTGTTGGAAGAGTCTCGTGGGTTTAAAGCCATGGAGAATAGTAGGTTGCTCTTGAAGGAAAATATGGTATCTGCCACAGTCATCGTGTTGACGATTTATTCTGGTTTTGGGATTTTACTATGGCTAAAGGCTCTTACTAAAAAGATGCTTTTTTCACCATCAACGGTGCCTATTTGGATGTATTTGTTGGGCAGCTTGTCGTTAGACTTTTTGATTTTGGTTTTCCTATTATGGAGGCTTGTGTCAGAGACAATGATCTATTTAGTGTGTAAATCATATAACCATGAGAGTATCGACAAGACGACTCTCTCAGATCCTGATCCAGTTCTCTTAAGAAGCTCAGAGTGTTAA

Protein sequence

MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNLHDYGNTSHLFSSHYMFIAWPYDIISIFFLFGWSILSTAGVSQTVATLYTGQEPSINDTMSVVVTVWKRLLVTFLCVILVFLIYHMIVGLALFIIILPLGEVDRTTLGVAFLFYFIGLFYLVVVLQLAGVVSVLEESRGFKAMENSRLLLKENMVSATVIVLTIYSGFGILLWLKALTKKMLFSPSTVPIWMYLLGSLSLDFLILVFLLWRLVSETMIYLVCKSYNHESIDKTTLSDPDPVLLRSSEC*

Homology

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BLAST of Csa6G421800.1 vs. TrEMBL
Match: A0A0A0KJQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G421800 PE=4 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 2.1e-170
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 1


Query: 1   MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL 60
           MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL
Sbjct: 1   MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL 60

Query: 61  HDYGNTSHLFSSHYMFIAWPYDIISIFFLFGWSILSTAGVSQTVATLYTGQEPSINDTMS 120
           HDYGNTSHLFSSHYMFIAWPYDIISIFFLFGWSILSTAGVSQTVATLYTGQEPSINDTMS
Sbjct: 61  HDYGNTSHLFSSHYMFIAWPYDIISIFFLFGWSILSTAGVSQTVATLYTGQEPSINDTMS 120

Query: 121 VVVTVWKRLLVTFLCVILVFLIYHMIVGLALFIIILPLGEVDRTTLGVAFLFYFIGLFYL 180
           VVVTVWKRLLVTFLCVILVFLIYHMIVGLALFIIILPLGEVDRTTLGVAFLFYFIGLFYL
Sbjct: 121 VVVTVWKRLLVTFLCVILVFLIYHMIVGLALFIIILPLGEVDRTTLGVAFLFYFIGLFYL 180

Query: 181 VVVLQLAGVVSVLEESRGFKAMENSRLLLKENMVSATVIVLTIYSGFGILLWLKALTKKM 240
           VVVLQLAGVVSVLEESRGFKAMENSRLLLKENMVSATVIVLTIYSGFGILLWLKALTKKM
Sbjct: 181 VVVLQLAGVVSVLEESRGFKAMENSRLLLKENMVSATVIVLTIYSGFGILLWLKALTKKM 240

Query: 241 LFSPSTVPIWMYLLGSLSLDFLILVFLLWRLVSETMIYLVCKSYNHESIDKTTLSDPDPV 300
           LFSPSTVPIWMYLLGSLSLDFLILVFLLWRLVSETMIYLVCKSYNHESIDKTTLSDPDPV
Sbjct: 241 LFSPSTVPIWMYLLGSLSLDFLILVFLLWRLVSETMIYLVCKSYNHESIDKTTLSDPDPV 300

Query: 301 LLRSSEC 308
           LLRSSEC
Sbjct: 301 LLRSSEC 307

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BLAST of Csa6G421800.1 vs. TrEMBL
Match: A0A0A0K819_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020230 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 3.4e-96
Identity = 188/232 (81.03%), Postives = 202/232 (87.07%), Query Frame = 1


Query: 75  MFIAWPYDIISIFFLFGWSILSTAGVSQTVATLYTGQEPSINDTMSVVVTVWKRLLVTFL 134
           M   WP+ IISI FLFG+SI STAGVSQTVA LYTGQ+PSI DTMSVVV VWKRLLVT L
Sbjct: 1   MSTVWPFHIISIIFLFGFSISSTAGVSQTVAALYTGQKPSIKDTMSVVVKVWKRLLVTNL 60

Query: 135 CVILVFLIYHMIVGLALFIIILPLGEVDRTTLGVAFLFYFIGLFYLVVVLQLAGVVSVLE 194
           CVILVFLIYHMIVGLALFIIILPLG VDRTTLGVAF+FYF+GL YLVVVLQLAGVVSVLE
Sbjct: 61  CVILVFLIYHMIVGLALFIIILPLGTVDRTTLGVAFVFYFVGLLYLVVVLQLAGVVSVLE 120

Query: 195 ESRGFKAMENSRLLLKENMVSATVIVLTIYSGFGILLWLKALTKKMLFSPSTVPIWMYLL 254
           ESRGFKAM  SRLLLKENMVSATVIVL I SGFGILLWLK+LT+ MLFSPS V IWM++L
Sbjct: 121 ESRGFKAMAKSRLLLKENMVSATVIVLAISSGFGILLWLKSLTRMMLFSPS-VAIWMHVL 180

Query: 255 GSLSLDFLILVFLLWRLVSETMIYLVCKSYNHESIDKTTLSDPDPVLLRSSE 307
            +LSLD  +LVFLLW LVSETM Y VCKSYNHESID +T+SD DP+LL   E
Sbjct: 181 ATLSLDLWVLVFLLWSLVSETMFYFVCKSYNHESIDMSTVSDHDPILLEIRE 231

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BLAST of Csa6G421800.1 vs. TrEMBL
Match: M5VKD3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008434mg PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.0e-43
Identity = 120/312 (38.46%), Postives = 171/312 (54.81%), Query Frame = 1


Query: 1   MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFV------LSGLML--- 60
           MD +  E+QFLG F I KE YKI+   +KIF+   L  I PL+F+      LS ++L   
Sbjct: 1   MDREQDELQFLGIFGICKEAYKIVFSWRKIFSQITLTLILPLSFIFLAHIELSNILLLKI 60

Query: 61  -----TLNNILRNLHDYGNTSHLFSSHYMFIAWPYDIISIFFLFGWSILSTAGVSQTVAT 120
                 L+    N   Y   S + SS +    W +  +   FL  +S+LST+ V  T+A 
Sbjct: 61  IHNERVLDRTNTNSPRYQRVSDVISSEWATF-WLFKAVYFTFLLIFSLLSTSAVVYTIAC 120

Query: 121 LYTGQEPSINDTMSVVVTVWKRLLVTFLCVILVFLIYHMIVGLALFIIILPLGEVDRTTL 180
           +YTG+E +    MSVV  VWKR++VTF C  + F  Y+++  + L I ++ +   D   +
Sbjct: 121 IYTGREITYRKVMSVVPKVWKRVMVTFFCTFMAFFAYNIVAFIVLIIWLVSVALTDAGGI 180

Query: 181 GVAFL--FYFIGLFYLVVVLQLAGVVSVLEESRGFKAMENSRLLLKENMVSATVIVLTIY 240
              FL  FYFIG  YL ++  LA VVSVLEE+RG KAM  S+ LLK NM  A +I   + 
Sbjct: 181 IGFFLLIFYFIGFVYLSLIWLLASVVSVLEEARGIKAMTKSKALLKGNMWVAAIIFFMLN 240

Query: 241 SGFGILLWLKALTKKMLFSPSTVPIWMYLLGSLSLDFLILVFLLWRLVSETMIYLVCKSY 297
              G+L +  A  K ++   S   +     G + L  L  + L W LV +T++Y VCKSY
Sbjct: 241 VLGGLLQF--AFQKLVVHGYSFGVVGRVAYGFICLLLLFKLILFW-LVIQTVLYFVCKSY 300

[Close]

BLAST of Csa6G421800.1 vs. TrEMBL
Match: A0A151R5Q3_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_040979 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.4e-41
Identity = 119/314 (37.90%), Postives = 173/314 (55.10%), Query Frame = 1


Query: 1   MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNN----I 60
           MD + ++MQ LG F ++KE+YK+I   KKIF+   L  I PL+F+    +   N     I
Sbjct: 1   MDREEEKMQLLGFFGVYKESYKLIFSWKKIFSQITLTLILPLSFIFLIHIQVSNTLFGKI 60

Query: 61  LRNLHDYGNTSHLFSSHYMFIAWPYDIISIFFLFG---------WSILSTAGVSQTVATL 120
             +  D   T      H   +       S FFLF          +S+LST+ V  TVA+ 
Sbjct: 61  AHDTEDLTETPRDTPQHQKLLDLISSDWSTFFLFKLVYFILLLIFSLLSTSAVVYTVASF 120

Query: 121 YTGQEPSINDTMSVVVTVWKRLLVTFLCVILVFLIYHMIVGLALFIIILPLG--EVDRTT 180
           YT +E S N  MSVV  VWKRL+VTFLC +  F++Y+++ G    ++ L +G   V    
Sbjct: 121 YTAKEVSFNKVMSVVPRVWKRLMVTFLCTVAAFIVYNVVAGAVTLMLALTIGVRNVGAAI 180

Query: 181 LGVAFLFYFIGLFYLVVVLQLAGVVSVLEESRGFKAMENSRLLLKENMVSATVIVLTIYS 240
           L V  +FY +GL YL VV  LA VV+VLE+S G++AM  S+ L+K NM  + +IVL +  
Sbjct: 181 LLVIAIFYLVGLVYLTVVWLLASVVTVLEDSYGYEAMMKSKELIKGNMGLSVMIVLKLNV 240

Query: 241 GFGILLWL---KALTKKMLFSPSTVPIWMYLLGSLSLDFLILVFLLWRLVSETMIYLVCK 297
            F ++ +L     +    LFS  ++   +Y  G +    L  +FLL  LV +T++Y VCK
Sbjct: 241 SFFLIQFLFTMVVVNGGELFSLGSMDRTIY--GIVCFLLLSHLFLL-MLVIQTVLYFVCK 300

[Close]

BLAST of Csa6G421800.1 vs. TrEMBL
Match: F6GZU7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15120 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.1e-41
Identity = 112/312 (35.90%), Postives = 172/312 (55.13%), Query Frame = 1


Query: 1   MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL 60
           MD + +EMQFLG F I+KE YKII   KKIF+   +  I PL F+    +   + + + +
Sbjct: 1   MDLEQEEMQFLGIFGIYKEAYKIIFSWKKIFSQITVALILPLCFIFLAYIEVSDYLFQKI 60

Query: 61  --HD------------YGNTSHLFSSHYMFIAWPYDIISIFFLFGWSILSTAGVSQTVAT 120
             H+            Y   S L SS  +   W   +  + F   +S+LST+ V  T+A 
Sbjct: 61  VIHEFELDGTRVDSAKYNKISDLLSSE-LIAFWLLKLAYLVFTLIFSLLSTSAVVYTIAC 120

Query: 121 LYTGQEPSINDTMSVVVTVWKRLLVTFLCVILVFLIYHMIVGLALFIIILPLG--EVDRT 180
           +YTG+E +    MSVV  VWKRL+VTFLC+ +    Y++   L L +  L +G  ++   
Sbjct: 121 IYTGREVTFKKVMSVVPRVWKRLMVTFLCIFVAVFAYNIFALLILILWALCIGPVKIGIL 180

Query: 181 TLGVAFLFYFIGLFYLVVVLQLAGVVSVLEESRGFKAMENSRLLLKENMVSATVIVLTIY 240
            L V F+ Y +GL Y+ ++ QLA VVSVLE+  GF+AM  SR L++  +V A VI L + 
Sbjct: 181 ILWVMFILYLVGLSYMSIIWQLASVVSVLEDLYGFRAMVKSRALIRGKLVVAIVIFLKLN 240

Query: 241 SGFGILLWLKALTKKMLFSPSTVPIWMYLLGSLSLDFLILVFLLWRLVSETMIYLVCKSY 297
                L  +K   ++++   +++ +   +   +    L+    L+ LV +T+IY VCKSY
Sbjct: 241 IS---LFVIKIAFERLVVYGASLGMANRVGYGILCFLLLFKLFLFGLVLQTIIYFVCKSY 300

[Close]

BLAST of Csa6G421800.1 vs. TAIR10
Match: AT4G19950.1 (AT4G19950.1 unknown protein)

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-30
Identity = 98/303 (32.34%), Postives = 149/303 (49.17%), Query Frame = 1


Query: 1   MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL 60
           MD   +E+QFL    I +E+  I   + K F +  L  I PL+F +    L    IL  +
Sbjct: 1   MDLAPEELQFLNKRGILRESTSIPQYSLKTFYLITLTLIFPLSFAILAHSLFTQPILAQI 60

Query: 61  HDYGNTSHLFSSHYMFIAWPYDIISIFFLFGWSILSTAGVSQTVATLYTGQEPSINDTMS 120
             Y         H   +   +    I FLF +S+LSTA V  TVA+LYTG+  S + TMS
Sbjct: 61  DTYPQADQSQLQHEWTVLLVFQFCYIIFLFAFSLLSTAAVVFTVASLYTGKPVSFSSTMS 120

Query: 121 VVVTVWKRLLVTFLCVILVFLIYH--MIVGLALFIIILPLGEVDRT--TLGVAFLFYFIG 180
            +  V KRL +TFL V L+ L Y+   ++ L   I+ + L  V     +L V F+ + + 
Sbjct: 121 AIPLVLKRLFITFLWVSLLMLAYNTVFLIFLVTLIVAVDLQNVVLAVFSLVVIFVLFLVV 180

Query: 181 LFYLVVVLQLAGVVSVLEESRGFKAMENSRLLLKEN--MVSATVIVLTIYSGFGILLWLK 240
             Y+  +  LA VVSVLE   G  AM+ S  LLK    M  + V +  ++ GF   ++  
Sbjct: 181 HVYMTALWHLASVVSVLEPIYGLAAMKKSYELLKGKTLMACSMVFIYLVHCGFIAGVFGA 240

Query: 241 ALTKKMLFSPSTVPIWMYLL-GSLSLDFLILVFLLWRLVSETMIYLVCKSYNHESIDKTT 297
            + +          I+  ++ G   +  L++V L+  LV +++ Y VCKS++H+ IDK+ 
Sbjct: 241 VVVR----GGDDYGIFARIVAGGFLVGVLVIVNLIGLLV-QSVFYYVCKSFHHQEIDKSA 298

[Close]

BLAST of Csa6G421800.1 vs. TAIR10
Match: AT1G31130.1 (AT1G31130.1 unknown protein)

HSP 1 Score: 129.4 bits (324), Expect = 3.8e-30
Identity = 97/306 (31.70%), Postives = 151/306 (49.35%), Query Frame = 1


Query: 1   MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL 60
           MD + +E+QFL   ++ +E+  I  ++ + F +  L FI PL+F +    L    IL  L
Sbjct: 1   MDLQPEELQFLTIPQLLQESISIKKRSPRTFYLITLSFIFPLSFAILAHSLFTQPILAKL 60

Query: 61  HDYGNTSHLFSSHYMFIAWPYDIISIFFLFGWSILSTAGVSQTVATLYTGQEPSINDTMS 120
                 +   S H   +   +    + FLF +S+LSTA V  TVA+LYTG+  S + T+S
Sbjct: 61  DKSDPPNSDRSRHDWTVLLIFQFSYLIFLFAFSLLSTAAVVFTVASLYTGKPVSFSSTLS 120

Query: 121 VVVTVWKRLLVTFLCVILVFLIYHMIVGLALFIIILPLGEVDRTTLGVAF-------LFY 180
            +  V+KRL +TFL V L+   Y+ +  + L ++++ L   D  +LG+A        + Y
Sbjct: 121 AIPKVFKRLFITFLWVALLMFAYNAVFFVFLVMLLVAL---DLNSLGLAIVAGVIISVLY 180

Query: 181 FIGLFYLVVVLQLAGVVSVLEESRGFKAMENSRLLL--KENMVSATVIVLTIYSG-FGIL 240
           F    Y   +  L  V+SVLE   G  AM  +  LL  K  M    + V     G  G++
Sbjct: 181 FGVHVYFTALWHLGSVISVLEPVYGIAAMRKAYELLKGKTKMAMGLIFVYLFLCGLIGVV 240

Query: 241 LWLKALTKKMLFSPSTVPIWMYLLGSLSLDFLILVFLLWRLVSETMIYLVCKSYNHESID 297
                +     +   T      L+G L +  L++V L+  LV +++ Y VCKSY+H++ID
Sbjct: 241 FGAVVVHGGGKYGTFT----RTLVGGLLVGVLVMVNLVGLLV-QSVFYYVCKSYHHQTID 298

[Close]

BLAST of Csa6G421800.1 vs. TAIR10
Match: AT5G44860.1 (AT5G44860.1 unknown protein)

HSP 1 Score: 126.3 bits (316), Expect = 3.2e-29
Identity = 102/307 (33.22%), Postives = 152/307 (49.51%), Query Frame = 1


Query: 1   MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL 60
           MD   +E+QFL    I +E+  I   + K F +  L  I PL+F +    L    IL  L
Sbjct: 1   MDLAAEELQFLNIQGILRESTTIPKFSPKTFYLITLTLIFPLSFAILAHSLFTQPILAQL 60

Query: 61  HDYGNTSHLFSSHYMFIAWPYDIISIFFLFGWSILSTAGVSQTVATLYTGQEPSINDTMS 120
                +    ++H   +   Y  I + FLF +S+LSTA V  TVA+LYTG+  S + TMS
Sbjct: 61  DATPPSDQSKTNHEWTLLLIYQFIYVIFLFAFSLLSTAAVVFTVASLYTGKPVSFSSTMS 120

Query: 121 VVVTVWKRLLVTFLCVILVFLIYH--MIVGLALFIIILPLGEVDRTTLGVAFLF-YFIGL 180
            +  V KRL +TFL V L+ L+Y+   ++ L + I+ + L  V      +  +F  F+G+
Sbjct: 121 AIPLVLKRLFITFLWVSLMMLVYNSVFLLFLVVLIVAIDLQSVILAVFSMVVIFVLFLGV 180

Query: 181 -FYLVVVLQLAGVVSVLEESRGFKAMENSRLLL--KENMVSATVIVLTIYSG-----FGI 240
             Y+     LA VVSVLE   G  AM+ S  LL  + NM  + V +     G     FG 
Sbjct: 181 HVYMTAWWHLASVVSVLEPIYGIAAMKKSYELLNGRTNMACSMVFMYLALCGITAGVFGG 240

Query: 241 LLWLKALTKKMLFSPSTVPIWMYLLGSLSLDFLILVFLLWRLVSETMIYLVCKSYNHESI 297
           ++ +       LF+   V       G   +  L++V L+  LV +++ Y VCKS++H+ I
Sbjct: 241 VV-VHGGDDFGLFTKIVV-------GGFLVGILVIVNLVGLLV-QSVFYYVCKSFHHQPI 298

[Close]

BLAST of Csa6G421800.1 vs. TAIR10
Match: AT2G18690.1 (AT2G18690.1 unknown protein)

HSP 1 Score: 55.5 bits (132), Expect = 6.9e-08
Identity = 67/319 (21.00%), Postives = 134/319 (42.01%), Query Frame = 1


Query: 16  IFKETYKIISKNKK------IFAMAALCFIHPLNFVLSGLMLTLNNILRNLHDYGNTS-- 75
           I  E+ K+  KNKK      +F +   C ++ LN  +  ++  + N++       +T   
Sbjct: 16  ILNESRKLFLKNKKLMFSVLVFPLLLNCLVYFLNIFV--IVPEITNLILEASLLPSTDPT 75

Query: 76  ---------HLFSSHYMFIAWPYDIISIFFLFGWSILSTAGVSQTVATLYTGQEPSINDT 135
                     +F+    F+   Y   ++  +   ++ S   +    A     +  +I D 
Sbjct: 76  SPEYAARLMRVFTDFRQFVGSSYIFAAVSSII--NLFSVLVIVHASAITLKDENFNIKDF 135

Query: 136 MSVVVTVWKRLLVTFLCVILVFLIYHMIVGLALFIIILPL-------GEVDR-----TTL 195
             + +  WK  LVT+  + L  L +    G   FII+ P+       G V+         
Sbjct: 136 PVLSLKSWKGPLVTYFYIALFSLGF----GFLFFIILCPILLFSIKSGSVENIGFLAVEA 195

Query: 196 GVAFLFYFIGLFYLVVVLQLAGVVSVLEESRGFKAMENSRLLLKENMVSATVIVLTIYSG 255
           GV  + + +   Y  +   L+ V+S+LEES GF+A+  +  ++K   +   + +L ++  
Sbjct: 196 GVLLIIFTVSQSYFAIYWNLSMVISILEESYGFQALGKAAKIVKG--MKTKLFLLNLF-- 255

Query: 256 FGILLWLKALTKKMLFSPSTVPIWMYLLGSLSLDFLILVFLLWRLVSETMIYLVCKSYNH 306
           FG+L    A   +++    ++ +   L     L  L+    +++LV+ T+ Y  CKS   
Sbjct: 256 FGLLASGLAQILQLINMGRSLAV--TLTTGFVLVCLVFAVRMFQLVTYTVAYFQCKSLQG 315

[Close]

BLAST of Csa6G421800.1 vs. NCBI nr
Match: gi|700192782|gb|KGN47986.1| (hypothetical protein Csa_6G421800 [Cucumis sativus])

HSP 1 Score: 606.3 bits (1562), Expect = 3.0e-170
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 1


Query: 1   MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL 60
           MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL
Sbjct: 1   MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL 60

Query: 61  HDYGNTSHLFSSHYMFIAWPYDIISIFFLFGWSILSTAGVSQTVATLYTGQEPSINDTMS 120
           HDYGNTSHLFSSHYMFIAWPYDIISIFFLFGWSILSTAGVSQTVATLYTGQEPSINDTMS
Sbjct: 61  HDYGNTSHLFSSHYMFIAWPYDIISIFFLFGWSILSTAGVSQTVATLYTGQEPSINDTMS 120

Query: 121 VVVTVWKRLLVTFLCVILVFLIYHMIVGLALFIIILPLGEVDRTTLGVAFLFYFIGLFYL 180
           VVVTVWKRLLVTFLCVILVFLIYHMIVGLALFIIILPLGEVDRTTLGVAFLFYFIGLFYL
Sbjct: 121 VVVTVWKRLLVTFLCVILVFLIYHMIVGLALFIIILPLGEVDRTTLGVAFLFYFIGLFYL 180

Query: 181 VVVLQLAGVVSVLEESRGFKAMENSRLLLKENMVSATVIVLTIYSGFGILLWLKALTKKM 240
           VVVLQLAGVVSVLEESRGFKAMENSRLLLKENMVSATVIVLTIYSGFGILLWLKALTKKM
Sbjct: 181 VVVLQLAGVVSVLEESRGFKAMENSRLLLKENMVSATVIVLTIYSGFGILLWLKALTKKM 240

Query: 241 LFSPSTVPIWMYLLGSLSLDFLILVFLLWRLVSETMIYLVCKSYNHESIDKTTLSDPDPV 300
           LFSPSTVPIWMYLLGSLSLDFLILVFLLWRLVSETMIYLVCKSYNHESIDKTTLSDPDPV
Sbjct: 241 LFSPSTVPIWMYLLGSLSLDFLILVFLLWRLVSETMIYLVCKSYNHESIDKTTLSDPDPV 300

Query: 301 LLRSSEC 308
           LLRSSEC
Sbjct: 301 LLRSSEC 307

[Close]

BLAST of Csa6G421800.1 vs. NCBI nr
Match: gi|659128751|ref|XP_008464353.1| (PREDICTED: uncharacterized protein LOC103502262 [Cucumis melo])

HSP 1 Score: 511.5 bits (1316), Expect = 1.0e-141
Identity = 261/308 (84.74%), Postives = 279/308 (90.58%), Query Frame = 1


Query: 1   MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL 60
           MDTKHKEMQFLGAF+IF+ETYKIISKNKKIFAM+ALCFIHPLNF+LSG M TLN ILRNL
Sbjct: 1   MDTKHKEMQFLGAFQIFEETYKIISKNKKIFAMSALCFIHPLNFILSGFMFTLNYILRNL 60

Query: 61  HDYGNTSHLFSSHYMFIAWPYDIISIFFLFGWSILSTAGVSQTVATLYTGQEPSINDTMS 120
           HDYGNTSHLFSS+YM + +PYDII IFFLF WSILSTAGVSQTVA LY GQEPSI D MS
Sbjct: 61  HDYGNTSHLFSSNYMTVVFPYDIIYIFFLFVWSILSTAGVSQTVAALYNGQEPSIKDIMS 120

Query: 121 VVVTVWKRLLVTFLCVILVFLIYHMIVGLALFIIILPLGEVDRTTLGVAFLFYFIGLFYL 180
           VVV VWKRLLVTFLCVILVF IYHMIVGLALFIIILPLG+VDRTTLGVAF+FYF+GL YL
Sbjct: 121 VVVKVWKRLLVTFLCVILVFFIYHMIVGLALFIIILPLGKVDRTTLGVAFVFYFVGLLYL 180

Query: 181 VVVLQLAGVVSVLEESRGFKAMENSRLLLKENMVSATVIVLTIYSGFGILLWLKALTKKM 240
           VVVLQL+GVVSVLEES GFKAM  SRLLLKENMVSATVIVL IYSGFGILLWL+ALT+KM
Sbjct: 181 VVVLQLSGVVSVLEESSGFKAMAKSRLLLKENMVSATVIVLAIYSGFGILLWLEALTRKM 240

Query: 241 LFS-PSTVPIWMYLLGSLSLDFLILVFLLWRLVSETMIYLVCKSYNHESIDKTTLSDPDP 300
           LFS  STV IWM+LLGSLSLD LILVFLLWRLVSETMIY VCKSY HE ID +++SD DP
Sbjct: 241 LFSTSSTVAIWMHLLGSLSLDLLILVFLLWRLVSETMIYFVCKSYKHERIDMSSVSDHDP 300

Query: 301 VLLRSSEC 308
           +LL S EC
Sbjct: 301 ILLGSLEC 308

[Close]

BLAST of Csa6G421800.1 vs. NCBI nr
Match: gi|700190705|gb|KGN45909.1| (hypothetical protein Csa_6G020230 [Cucumis sativus])

HSP 1 Score: 359.8 bits (922), Expect = 4.9e-96
Identity = 188/232 (81.03%), Postives = 202/232 (87.07%), Query Frame = 1


Query: 75  MFIAWPYDIISIFFLFGWSILSTAGVSQTVATLYTGQEPSINDTMSVVVTVWKRLLVTFL 134
           M   WP+ IISI FLFG+SI STAGVSQTVA LYTGQ+PSI DTMSVVV VWKRLLVT L
Sbjct: 1   MSTVWPFHIISIIFLFGFSISSTAGVSQTVAALYTGQKPSIKDTMSVVVKVWKRLLVTNL 60

Query: 135 CVILVFLIYHMIVGLALFIIILPLGEVDRTTLGVAFLFYFIGLFYLVVVLQLAGVVSVLE 194
           CVILVFLIYHMIVGLALFIIILPLG VDRTTLGVAF+FYF+GL YLVVVLQLAGVVSVLE
Sbjct: 61  CVILVFLIYHMIVGLALFIIILPLGTVDRTTLGVAFVFYFVGLLYLVVVLQLAGVVSVLE 120

Query: 195 ESRGFKAMENSRLLLKENMVSATVIVLTIYSGFGILLWLKALTKKMLFSPSTVPIWMYLL 254
           ESRGFKAM  SRLLLKENMVSATVIVL I SGFGILLWLK+LT+ MLFSPS V IWM++L
Sbjct: 121 ESRGFKAMAKSRLLLKENMVSATVIVLAISSGFGILLWLKSLTRMMLFSPS-VAIWMHVL 180

Query: 255 GSLSLDFLILVFLLWRLVSETMIYLVCKSYNHESIDKTTLSDPDPVLLRSSE 307
            +LSLD  +LVFLLW LVSETM Y VCKSYNHESID +T+SD DP+LL   E
Sbjct: 181 ATLSLDLWVLVFLLWSLVSETMFYFVCKSYNHESIDMSTVSDHDPILLEIRE 231

[Close]

BLAST of Csa6G421800.1 vs. NCBI nr
Match: gi|778721983|ref|XP_011658385.1| (PREDICTED: uncharacterized protein LOC105435982 [Cucumis sativus])

HSP 1 Score: 295.8 bits (756), Expect = 8.6e-77
Identity = 155/188 (82.45%), Postives = 166/188 (88.30%), Query Frame = 1


Query: 119 MSVVVTVWKRLLVTFLCVILVFLIYHMIVGLALFIIILPLGEVDRTTLGVAFLFYFIGLF 178
           MSVVV VWKRLLVT LCVILVFLIYHMIVGLALFIIILPLG VDRTTLGVAF+FYF+GL 
Sbjct: 1   MSVVVKVWKRLLVTNLCVILVFLIYHMIVGLALFIIILPLGTVDRTTLGVAFVFYFVGLL 60

Query: 179 YLVVVLQLAGVVSVLEESRGFKAMENSRLLLKENMVSATVIVLTIYSGFGILLWLKALTK 238
           YLVVVLQLAGVVSVLEESRGFKAM  SRLLLKENMVSATVIVL I SGFGILLWLK+LT+
Sbjct: 61  YLVVVLQLAGVVSVLEESRGFKAMAKSRLLLKENMVSATVIVLAISSGFGILLWLKSLTR 120

Query: 239 KMLFSPSTVPIWMYLLGSLSLDFLILVFLLWRLVSETMIYLVCKSYNHESIDKTTLSDPD 298
            MLFSPS V IWM++L +LSLD  +LVFLLW LVSETM Y VCKSYNHESID +T+SD D
Sbjct: 121 MMLFSPS-VAIWMHVLATLSLDLWVLVFLLWSLVSETMFYFVCKSYNHESIDMSTVSDHD 180

Query: 299 PVLLRSSE 307
           P+LL   E
Sbjct: 181 PILLEIRE 187

[Close]

BLAST of Csa6G421800.1 vs. NCBI nr
Match: gi|778721979|ref|XP_011658384.1| (PREDICTED: uncharacterized protein LOC105435981 [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 7.9e-46
Identity = 126/316 (39.87%), Postives = 180/316 (56.96%), Query Frame = 1


Query: 8   MQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL------- 67
           M  L    IF+ETY+II   +KIF+  AL  I PL F+    M   N +  N        
Sbjct: 1   MVLLEIVDIFQETYEIILTWRKIFSQIALSLILPLTFIFLAHMEISNLLFGNFFYQVSFL 60

Query: 68  ------HD---YGNTSHLFSSHYMFIAWPYDIISIFFLFGWSILSTAGVSQTVATLYTGQ 127
                 HD   Y   S L +    F  W ++I  I FLF +S+LST+ V  TVA ++TG+
Sbjct: 61  HKNNQDHDARKYNELSDLITPKLTFF-WLFNISYIVFLFVFSLLSTSAVVYTVACIHTGR 120

Query: 128 EPSINDTMSVVVTVWKRLLVTFLCVILVFLIYHMIVGLA----LFIIIL---PLGEVDRT 187
           E S    +S+V  VWKRL+VTF CV   F +Y+++   A    LFI+++   P G+V+ +
Sbjct: 121 EISFKQIISIVPKVWKRLVVTFFCVFASFFVYNLLAVFAFILLLFILLVQYGPFGDVNGS 180

Query: 188 TLGVAFLFYFIGLFYLVVVLQLAGVVSVLEESRGFKAMENSRLLLKENMVSATVIVLTIY 247
              V F+ YFIGL YL V++QL+ VV+VLEES GFKAM  S+ LLK NM+ AT+++L I 
Sbjct: 181 IFVVFFILYFIGLLYLSVIVQLSSVVTVLEESYGFKAMVKSKALLKGNMLVATLMLLLI- 240

Query: 248 SGFGILLWLKALTKKMLFSPSTVPIWMYLLGSLSLD----FLILVFLLWRLVSETMIYLV 297
               +++  +A  K ++       +W  +LG   L     FL+L F LW+LV ET++Y V
Sbjct: 241 -NISLVIIQQAFVKLVVHG-----VWFGILGRGILGIVCLFLLLNFFLWQLVLETVLYFV 300

The following BLAST results are available for this feature:

BLAST of Csa6G421800.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJQ4_CUCSA	2.1e-170	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G421800 PE=4 SV=1	[more]
A0A0A0K819_CUCSA	3.4e-96	81.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020230 PE=4 SV=1	[more]
M5VKD3_PRUPE	2.0e-43	38.46	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008434mg PE=4 SV=1	[more]
A0A151R5Q3_CAJCA	1.4e-41	37.90	Uncharacterized protein OS=Cajanus cajan GN=KK1_040979 PE=4 SV=1	[more]
F6GZU7_VITVI	3.1e-41	35.90	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15120 PE=4 SV=...	[more]

BLAST of Csa6G421800.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19950.1	1.7e-30	32.34	unknown protein	[more]
AT1G31130.1	3.8e-30	31.70	unknown protein	[more]
AT5G44860.1	3.2e-29	33.22	unknown protein	[more]
AT2G18690.1	6.9e-08	21.00	unknown protein	[more]

BLAST of Csa6G421800.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700192782\|gb\|KGN47986.1\|	3.0e-170	100.00	hypothetical protein Csa_6G421800 [Cucumis sativus]	[more]
gi\|659128751\|ref\|XP_008464353.1\|	1.0e-141	84.74	PREDICTED: uncharacterized protein LOC103502262 [Cucumis melo]	[more]
gi\|700190705\|gb\|KGN45909.1\|	4.9e-96	81.03	hypothetical protein Csa_6G020230 [Cucumis sativus]	[more]
gi\|778721983\|ref\|XP_011658385.1\|	8.6e-77	82.45	PREDICTED: uncharacterized protein LOC105435982 [Cucumis sativus]	[more]
gi\|778721979\|ref\|XP_011658384.1\|	7.9e-46	39.87	PREDICTED: uncharacterized protein LOC105435981 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa6G421800	Csa6G421800	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa6G421800.1	Csa6G421800.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G421800.1.utr3p1	Csa6G421800.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G421800.1.cds1	Csa6G421800.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G421800.1.utr5p1	Csa6G421800.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33133	FAMILY NOT NAMED	coord: 1..296 score: 8.1
None	No IPR available	PANTHER	PTHR33133:SF5	EXPRESSED PROTEIN	coord: 1..296 score: 8.1