Csa6G411290.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G411290.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Chloroplast lumen common protein family-like protein; contains IPR021825 (Protein of unknown function DUF3411)
Location	Chr6 : 19097146 .. 19105364 (+)
Sequence length	1605

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCTCTTTCTTTTTCTCTCTCTCTGATTTCCCTATTTCTTAGAGAGATTGAGAACCAGAGAATTCGGAATCCGTAATCCGTAATCTTCTTCTTTCTTTCTTCCCCGTTTCAATCTCGATGACCATATAGACAACACACGGGATTCAATTCAACCTCATCCATAGCCGAATATGTCTCATGCGGTGTTTCAAACGGCTCAAATCATGCCCATTAACACCCAGCTTACCACCAACAACCTATGGCTGCCCGCGGTTGTTAAACTCGGTCCCTCCTATCGAAACAGAGCAGTTTTGGTGGTCAAGGCTTTCACAGCTTCTCCTCCTTCTTCCTCTTCTTCGGGTGTTTCTTATGGGGATTCCATTTCTTTTCTGGAGCGTTGCTTTGAAACCTCATTTCCGCCTGCTGGGGTTGACCCTTCTCTTGCCGTATCTTCTTCCTCTTTTGGCCCTGTTATGAAGGGCAAATATGGTGCCTTTGGTGCTGTAACTTTGGAGAAATCCAAGCTTGATTTGTCTCAGAAGCAGTCCAAGTCCAGCCCTGAGGTAAGTTACTTCAGTTTTGCTTTCCTTCACTTGGATTGTGCCTATGCTTTGGTATTGCATGGATTCTTCTAGTCGTGAAATGTTCCATAGTTGGAAAAGCAGATTTATTTATTTATTATTATTATTATTTTTGGCAATATGAACTTTGGTTTTAGCTCCCTTTCTATGAGAAATAGCATTTTCACTTGGAAGTTTTTGTTCCTTGTATTTCTGGCAATTGATTCGGGACGTTTTCCTATCTCAGCCAACTGTTAAACATTTCATTTCAATTGAAATACAGGTCTTCCAAACTTGGTTTTCTATTTCGGTCTGAGAGGCAGTGCTTCTTGTTAAATTTTTTAATCCTATCTTAATTCTTATGGATAGTTGAACAGTAAGTGTCCTAAGTTAGATGTGTAGAACCACTGCCAATCCATTTCCTTTCTTTTTTGAACGAGGGTCTATTAGATCACCGTTAATAAAAATGAGTCCACTTCTCAATAGGTCAGAAATGGATTTGCTAAATACTGATTACTGAATCATATTTCTTGGAGAGAGTTGCAGGACTATCACGAGTAAGCCCAATGGTTATTGGAGGTGTGAAAAGAAAGAAAAAGAAGAGGTAAAGAGCTTAAGAGAGAATGAGTTTGAACTAGTTACCTGCTTAATTCGATGACAAACACATAAAAAGGTTAAACTATTGCCTTATGAGATTAATCGGGTGAGTGTATCTTGGGCACTCACGTATATTATTAAAAAAGATTACAGTCCACTTCTCATGCTTATTTGGTGGACTTAATGAAAACAAGCAAATTTGAAATTGTTTCAAGTTGATGACTTGTACTCTTGTCCAGTTGCCCCCCCTCCCCCCAACCCAGCCCCTTCATGGCAACCATCCTCTTCCCTTTGCTTCACCTTGATGGAGCAGAATTGCTCACAATGCTCCATCACAATTGGTGTTGGATCCTTCTCAATCTTGGTGGTGACGGTTAATAAAGGTAGTCATGCTACTGTACAAAGTTCGAAGAAAATTCTTTTTGCTTCGTCCCTGTGAGCTGAATCTTTCTTGACTGGCTTCTGAAATTCAGCGTTAAAATGTCTGTTAGATTTGCCTCCCACCACCCTTGAACTTTCCAAGGAACATAAAGGTGAAGACTTGTTATTTAGGAAGTAAAGTTTTCAAATGAAGGAGGTTTTTTTATGGAGATGACAAAGTTTTGATGACAATGGTGGAAAAAGAAAAATCATTGAGATTTTTGGAGATGGCACGATAGGTTGGTCATCCTTATTGTCTCTGACTCTAAATTTTCTAGAAAAAAAGTAAGTGCACCATACTCAAGGATACAGTTGTAGCAAGGCCAATCCTTTCATCCTTCTCATAAAGATCAATTGTTGAAAGGTACTATTGGCCTCCTTTTCTCGTCTATGATATCCTTATTCTTTTCTTTTTTTAAAAATGGTATTAATGTTTAATGGCCTAGAGATCTTTGTAGAACACATAATTCCTTCCCATCTGCATATACAGTCCTACGATGGACTGTGCATGTGTCTAAGTGAGACGATGAGGCACTGTTGAGTGTGCCATTGAACTAAATGAACATTTCTCCTCTTCCAAATCCCCCACATTGAAAGCATGGGAAGAGCAATCCGTTTCCATTTAAAGAGAACACATCCATGATTTTGAGGAAAGTCCTTCCAACAAAAAGATCCCTGCTAATAATTTTATTTTACTGGTAGTGGTAACTTATTTTTGTTTAGATTTTTGTGGGGACGGAGAGTTAGGGAGGGACACTCAATGAAACAGATTCGGGCCAATTTATAGTCTGGAAATAAAAATATTCAACCATTTGTCCAGCTTGGATATGGAATTTTCAACTGATGGGTTCCAAAAGGATGGGTCTCAAGGTCTTCTTCAAGAGAGAAACCAAGATACTTGAAGAGAAAAGATTCTGCCTTTCATTCAAACCTCTCTGCTTGCTTTCAACAGATACAAATAGGAGACCGAAAATTCTCTTTTGACCCATATATCTTTATGACCATTGAATACATCTCAAAACAATTTCCTATTATTTCTTTCTAACCAAAGTTGCCAAGAAAATCCCCAAATATTTTCACATCTCTTTATGACCCTGACAAACTTCCAGAACAATCTGTTATTCCTTCTGACTGAAGTTGTCAATAAAAAATCCTAATGGAGCCACATCTCTATATGACGCCTAAAAGCACCTTGAAACATCTTTATTTTTTTTAAACCATAGTTATCAAGAAAAAACCACAACTGACTTATACCTCTTTATGACACCTACAGGCATCCTGATACATGTATCCTTTGTATGCTAAGAAGTTTATTCCGAATATGAAGATGAAGGATCACCGCATACTGTGACAGTATAAAATGTGTTCACCTGAACTACATATAGGAACAATTCAGAAACATCTGATTGACATTGCCAGAGAATTCTCTATGAACCAACTCCCCAATCTCAACCTGAAGAACACAAGGGTCCTAGCTTGTATTTATCACGTGTATCCATTTACAACAAAAAAGGTTCTATGGGAAGAGGGAAACACAGCCTAAAAGCCTAGAAATGAAGGTTCCCTTTCCTTAAATAGGAATCAGAAAAAGCCCACCCAAAGAGGGACACATTTTATATTTTTAGGATACAGTGATCCTTCCCTCTTCATATTGGGTGAAAACAACTTTTCAGGTTGCAAATGGCCTTCTGTCCTTTGGTAAGCCTCATTTTGAATCTCAGAGGCTTCTAGCTTGAAAGAACTCTTAGGTAGACTCACTTTTCTCCAAGCAACCCTTGCCGAATAAGGTGTGCAATCTTTGGAAAAGCTTTTTTCTAAATTTTACTATGGGAAGGAAACGATGACAGCATTAGCTTCCACCCTTTCAAATGGGACAATGTCATGCTTCCAATCAAAGCTAGAAGTGTTGGGATTTGTAACTGATTAACAAGAACAAGCCTCCTCTTGCAAAATGGAATTAACACTTCCTGAATGAGAATAGAATCTTATAAAAGAAAGTCATCAAGGCTTAGTATGGCCGTACTTGCTTATCTTCATCTCTGGGCTCATCATCCTATAGATCCTTTTAGGGGTCTGTGGATTTCTATTATGAGGCATAAGAAGCTGATATTTCATTGACTTCCCTGTAATGTTAGGGATGGGGCACATACCTCTTTTTGTAGTTTTGTTTGGTCAAAGGGCTCCTCCAGCATAAAGCTTCTGTTGGCTTTTTTATTTGACATTAAAAAGGTTTGCACTTGTTAAATACTTTTGGGTGGTGGATTCTAACATTTTGAATTTGCATCTTAGAAGGAATCTCAATGATATTAAATAAAAAAGAATGGACCTCTCTTATACATCTTTTATCCTTCTTGCAACAAACACAAGGCAGTGACAGAATCTTGTGGAAGCTGTGCAATCAAATGGAGATTTTTATCACAGAGCACCAATTATTGAACATTCAAATGGCTATGTTGTGTTTGAAAGATTAAGTTTTTTATTTTTTCCTAAGGTGGTAAGCTTCTATTATATAAGCTCCAACACAAGATGCCTTACATGTGTAGAAACAGCTCAGAGTCTCAAATTCACCTCACCTCTTTGTATCATGCAATTATGCATACAAGTTCTTAAGTGCGGCTCTTATCTAGTTTTGGTTGACCTGTAAAAGGTCAGATGCATTGGATTAGAGCCCTTTTCTGTTTTGAGTTGGCTCCTTTTTGGGTTTTGGTTGCGTATCCCTCTAGTATTTGTTCCCTTTGTCTGATTGGAACTTGGAATTATGGTTTCTCATTACACACAAACAAAGGAAAAATGATTCTAGCCAAGAATTGTCGACTGAAATGTTTTGAGAGTCTTTGTAGTTAAATATACTGATGTTGCTATTTTTATTTCTATTTTTGCACCTCACCCTCCACTTTAGAGCACTATTGCTCTCTATTATGTTTTGTCCTTTTGTTTTCTGCTTACCAAAAGAAAAAAAAATATGTCCTTTGTTTTTTGTTGTCTAGTTATGTTTTTGGTTAGTGGAATTAAGCATGTCTTCTATGTTGTTGGTTGTGTTATTTCATTTTCCCAATTCCAAGTGTTTCAAGCTGAAACAATATCATAACAAATTGCAGCTTGCAATTGGGGGAGGTGGTGGAGATATTGGCAAGAAAATCAATCATGGTGGTGGCGACGGTGGAGACGATGATGGTGATGATGATGATTACTATGATGAGTTTGATGATGGAGACGAGGGAGATGAGGGTGGCTTGTTCCGGAGAAGGAAATTTCTTGAAGAGGTATACAATCTATTACTGACAGATCCGTGTTGCTATTGTTTTTTATGGGCTCATTTTTAGCACTAACTTCGTATTTGCTCTAGCTTTTTGATCGTAAATTTGTAGATGCAGTATTAAACGAGTGGCAGAAGACAATGATGGATTTGCCTGCTGGATTTCGTCAGGCTTATGAAATGGTAGTGTTTTGATTTTCTTATTACTGTGATTATGGGTGGCCATTCAAACTGCAAAACGGAACCGTTTCTTAAAACCAAACCGAACCGAATACTCAATGAAACTGAAAATTTTTGTTCGGCTCGGTTTAAAGAAATTTGAAACCGAATTGAAACTAAACTGATTTGTTTTTAACTAATATATATTTATCTTTATATTTTTATATTTATATATTTAAAAAAAGTAGAATTGAATTAAAACCGAACCACTTTTAATTTAAAGAACAAAACCTAATTTAAAACCGTACCAAACCAAATTATTTTTTAAAATGTTTTAAAATTACCAAAACCAAATTTGAATCGAACCGAACTGCATAAATACGGTTCAGTTTGGTTTGAACCAATAAATCGGTTCGGTTCTGTTTTGTGCCAAACCGATTCGTTTCCACCTCTAAGTGTGATATTTTCTTGTAGGAGTCAGGAAATATTTTATCATTTTTCTTTTGTGCTAAATATTTAGCCTTGAACTTTGGTTAGATGCTGACAAATTATTTATCCCAGGGTTTAGTTAGCTCGGCTCAAATGGTAAGATTCTTAGCAGTGAATGCCAGGCCAACTACAACTCGGTTCATTTCACGATCACTTCCTCAAGGAATCTCACGGGCTTTTATTGGCAGGTGAATTTTTAAAAAATTCTCTGGTAGAGTTTACGAGGCCTTTAATTCTTAAGTAATTCACTTCAATTCTTTTACCAATTCACCATTCTTAGAGAGGTGACATGGGAACTCGCTTACTAGAAGATATTAATTCTCCATTAAGCATCAACATCTTAATATTAGATCCTAAACCTGAATTTAAGCAATTAGATATTGTAATGTCTAATTCTAAATTACCATGAATTCTACTGGATTCTTAAGCTTTCTGACATTACATTTTAGGGATGGTTGCATATATGACAAAATGAGCCAAATTAATAGCCAAAATAGCTTAACTTAAAACTATTTGCAAATATTACAAAATCTAAGTGAAAATTCTCAATACACAATTTCAATCCAAATCACTCATACACAAATTTAGCCCAGATCGATTCATTTCGAACTATTTGCACGTTTTATTTTTTTTCTTAAGTTTTCCTTAATGTTTTTGTCCTTATAGTGTCATTTTTGGTCCATTTAAATAACTTGAACCGTTTTTATTAGTTTCATTTTTTTCTTTAAGTCATTTTTCTTCTATGCATGTTTTATATCACTGACTTGGACCATGAAGGAAGTCTATAAAGTGATTGACAAACTCTTATCACCAATTGAAATCCATTGTTGATAGGAGTCTATTGTTTATTGAATCCTATCATGAAACTTGTGTCACTGTCTAGAATTATGATCACATAGAATTGCCATCTCAAACCCCTTTTCACCTTCCAATTCTCAGTCCTGGGGTCATCTCCTTTGGAAACTTACGGTTTCTTTTCTGCCAAATTTTCTGAAGTAGACATGCGTATGCGTATTTTATATTATAGCAACATATGTATGATAATATTTCTCTATCGATATCTTGCATGTGGAGTGGACCAACAGCTTCATTATACCAACATATGTATGATAATATTTCTCTATCGATATCTTGCATGTGGAAGTGGACCAACGGCTTCACTAGCTTCCTCCTCCCCGTCCTTTTTTTGAGGAAGTAAATTTCAAAACGATAAAATGAACAGTTCAATTTCTTTCATGGTTCCGTACTTGAATTTTTCTTGTACTGATCAGTAGTTTGTTTGAGCGAAAAACTGCATGCACACTTCGAAAAAGAAATATATATTTTCGAACTTTAACATATTGTATAATTGCACAGGATGTTAGCAGATCCTTCCTTTCTCTATAAACTTCTTTTAGAGCAAGCTGCTACAATTGGTTGCGCGGCTTGGTGGGAAATAAAGAATCGCAAGGACAGGTTTGTTATTTAGGCATATGGTTAAACTTTATTTCATTTTCTTAATTTATCTTTTATTTGATTGGCTTACAAATTTGTTGTTTTGTTGTGGTTCCAGGATAAAACAGGAATGGGATCTGGCGCTCATTAATGTTCTCACTGTTACCGCTTGCAATGCTATAGTTGTTTGGTCACTTGCTCCTTGTCGTTCATATGGAAATACATTCCGATTTGATTTGCAAAATACATTACAGAAGCTTCCCAATAATATATTTGAAAAAAGTTATCCTATGAGGGAATTTGACCTACAAAAGAGAATCCATTCCTTCTTCTACAAAGCTGCAGAGTTGTGCATGGTCGGTATAACTGCAGGAGCAGCTCAAGGTGTTTTGTCCAATTTTCTCTCTAGTAAAAAGCAGGAAAGGTAATAGACCACTCCCATTTGGCAAATAGAAGTGCTAATTAAGTTCCCATTTTTTCTTCACTCGGAGTTGCGTATGTGTTTGACAGGTTATCTGTATCAGTTCCAACTGTGAGTACCAATGCTCTCGGGTATGGTGCTTTTCTTGGTCTATATGCAAATCTCCGGTATCAGTTATTATGCGGTTTTGACAGAGCAATGATCAATCATTTTGATGTTATTGGAGTCGCTCTGTTTTTAAGCTCTGCAATGAGGTTCGAACTGATTTTTCCCTTATGAAATATTTTTGGCATTTATTTGTAAAGTCTTAAACATGCCATTTTTTTCCCTTTAAAGTCTCTGGTTTAAACACAATCTTATCCAAAAAGACATTGTTGGGCAAATAATATTTCATAAAACCATATTGGAATTGTATGTAGGGTTTTGAATGTGCAACTAGGAGAAAGATCAAGATTGGCTTGGCTTGGAATAGAGGCAGATCCATTGGTTCAGTCAAGGGAACTCTTGGAGAAGGTTTACAACCGACCTTCTCAAGGCGTTAGTCAATCTTCCTCGAAATGGTTTATTTCAAAGAATGCCATCATTTCTGGCCTTGGACTCCTCGGTCTCAAACAGTCCGGTGTTGATTCCGTCTCTGAAGGTGAATCAGTACCCAAAGCACGGAGGAAGCGAATTGTTCGGAGAAAGGTAACGGCAGGTTCGTCATGATCTTTTATCCAGTTAGTGCATTCTTCAGTACCCCCAGTTTTGCAGTATGACTATAGATTTGGTGCAAAGTTGCCGTATAAATCTTTGATAAAAGTTAGTTGATAGGTGGATAATATTCTGTCCTTTGATGTAATCTTGTGATCCAACTGGAGAAATTCATTTAAAGCTGAATTCATGCAATTATTATTAAATTTCC

mRNA sequence

ATGTCTCATGCGGTGTTTCAAACGGCTCAAATCATGCCCATTAACACCCAGCTTACCACCAACAACCTATGGCTGCCCGCGGTTGTTAAACTCGGTCCCTCCTATCGAAACAGAGCAGTTTTGGTGGTCAAGGCTTTCACAGCTTCTCCTCCTTCTTCCTCTTCTTCGGGTGTTTCTTATGGGGATTCCATTTCTTTTCTGGAGCGTTGCTTTGAAACCTCATTTCCGCCTGCTGGGGTTGACCCTTCTCTTGCCGTATCTTCTTCCTCTTTTGGCCCTGTTATGAAGGGCAAATATGGTGCCTTTGGTGCTGTAACTTTGGAGAAATCCAAGCTTGATTTGTCTCAGAAGCAGTCCAAGTCCAGCCCTGAGCTTGCAATTGGGGGAGGTGGTGGAGATATTGGCAAGAAAATCAATCATGGTGGTGGCGACGGTGGAGACGATGATGGTGATGATGATGATTACTATGATGAGTTTGATGATGGAGACGAGGGAGATGAGGGTGGCTTGTTCCGGAGAAGGAAATTTCTTGAAGAGCTTTTTGATCGTAAATTTGTAGATGCAGTATTAAACGAGTGGCAGAAGACAATGATGGATTTGCCTGCTGGATTTCGTCAGGCTTATGAAATGGGTTTAGTTAGCTCGGCTCAAATGGTAAGATTCTTAGCAGTGAATGCCAGGCCAACTACAACTCGGTTCATTTCACGATCACTTCCTCAAGGAATCTCACGGGCTTTTATTGGCAGGATGTTAGCAGATCCTTCCTTTCTCTATAAACTTCTTTTAGAGCAAGCTGCTACAATTGGTTGCGCGGCTTGGTGGGAAATAAAGAATCGCAAGGACAGGATAAAACAGGAATGGGATCTGGCGCTCATTAATGTTCTCACTGTTACCGCTTGCAATGCTATAGTTGTTTGGTCACTTGCTCCTTGTCGTTCATATGGAAATACATTCCGATTTGATTTGCAAAATACATTACAGAAGCTTCCCAATAATATATTTGAAAAAAGTTATCCTATGAGGGAATTTGACCTACAAAAGAGAATCCATTCCTTCTTCTACAAAGCTGCAGAGTTGTGCATGGTCGGTATAACTGCAGGAGCAGCTCAAGGTGTTTTGTCCAATTTTCTCTCTAGTAAAAAGCAGGAAAGGTTATCTGTATCAGTTCCAACTGTGAGTACCAATGCTCTCGGGTATGGTGCTTTTCTTGGTCTATATGCAAATCTCCGGTATCAGTTATTATGCGGTTTTGACAGAGCAATGATCAATCATTTTGATGTTATTGGAGTCGCTCTGTTTTTAAGCTCTGCAATGAGGGTTTTGAATGTGCAACTAGGAGAAAGATCAAGATTGGCTTGGCTTGGAATAGAGGCAGATCCATTGGTTCAGTCAAGGGAACTCTTGGAGAAGGTTTACAACCGACCTTCTCAAGGCGTTAGTCAATCTTCCTCGAAATGGTTTATTTCAAAGAATGCCATCATTTCTGGCCTTGGACTCCTCGGTCTCAAACAGTCCGGTGTTGATTCCGTCTCTGAAGGTGAATCAGTACCCAAAGCACGGAGGAAGCGAATTGTTCGGAGAAAGGTAACGGCAGGTTCGTCATGA

Coding sequence (CDS)

ATGTCTCATGCGGTGTTTCAAACGGCTCAAATCATGCCCATTAACACCCAGCTTACCACCAACAACCTATGGCTGCCCGCGGTTGTTAAACTCGGTCCCTCCTATCGAAACAGAGCAGTTTTGGTGGTCAAGGCTTTCACAGCTTCTCCTCCTTCTTCCTCTTCTTCGGGTGTTTCTTATGGGGATTCCATTTCTTTTCTGGAGCGTTGCTTTGAAACCTCATTTCCGCCTGCTGGGGTTGACCCTTCTCTTGCCGTATCTTCTTCCTCTTTTGGCCCTGTTATGAAGGGCAAATATGGTGCCTTTGGTGCTGTAACTTTGGAGAAATCCAAGCTTGATTTGTCTCAGAAGCAGTCCAAGTCCAGCCCTGAGCTTGCAATTGGGGGAGGTGGTGGAGATATTGGCAAGAAAATCAATCATGGTGGTGGCGACGGTGGAGACGATGATGGTGATGATGATGATTACTATGATGAGTTTGATGATGGAGACGAGGGAGATGAGGGTGGCTTGTTCCGGAGAAGGAAATTTCTTGAAGAGCTTTTTGATCGTAAATTTGTAGATGCAGTATTAAACGAGTGGCAGAAGACAATGATGGATTTGCCTGCTGGATTTCGTCAGGCTTATGAAATGGGTTTAGTTAGCTCGGCTCAAATGGTAAGATTCTTAGCAGTGAATGCCAGGCCAACTACAACTCGGTTCATTTCACGATCACTTCCTCAAGGAATCTCACGGGCTTTTATTGGCAGGATGTTAGCAGATCCTTCCTTTCTCTATAAACTTCTTTTAGAGCAAGCTGCTACAATTGGTTGCGCGGCTTGGTGGGAAATAAAGAATCGCAAGGACAGGATAAAACAGGAATGGGATCTGGCGCTCATTAATGTTCTCACTGTTACCGCTTGCAATGCTATAGTTGTTTGGTCACTTGCTCCTTGTCGTTCATATGGAAATACATTCCGATTTGATTTGCAAAATACATTACAGAAGCTTCCCAATAATATATTTGAAAAAAGTTATCCTATGAGGGAATTTGACCTACAAAAGAGAATCCATTCCTTCTTCTACAAAGCTGCAGAGTTGTGCATGGTCGGTATAACTGCAGGAGCAGCTCAAGGTGTTTTGTCCAATTTTCTCTCTAGTAAAAAGCAGGAAAGGTTATCTGTATCAGTTCCAACTGTGAGTACCAATGCTCTCGGGTATGGTGCTTTTCTTGGTCTATATGCAAATCTCCGGTATCAGTTATTATGCGGTTTTGACAGAGCAATGATCAATCATTTTGATGTTATTGGAGTCGCTCTGTTTTTAAGCTCTGCAATGAGGGTTTTGAATGTGCAACTAGGAGAAAGATCAAGATTGGCTTGGCTTGGAATAGAGGCAGATCCATTGGTTCAGTCAAGGGAACTCTTGGAGAAGGTTTACAACCGACCTTCTCAAGGCGTTAGTCAATCTTCCTCGAAATGGTTTATTTCAAAGAATGCCATCATTTCTGGCCTTGGACTCCTCGGTCTCAAACAGTCCGGTGTTGATTCCGTCTCTGAAGGTGAATCAGTACCCAAAGCACGGAGGAAGCGAATTGTTCGGAGAAAGGTAACGGCAGGTTCGTCATGA

Protein sequence

MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS*

Homology

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BLAST of Csa6G411290.1 vs. Swiss-Prot
Match: RER1_ARATH (Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana GN=RER1 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 9.2e-26
Identity = 97/313 (30.99%), Postives = 151/313 (48.24%), Query Frame = 1


Query: 119 SKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLE 178
           S   PEL  G GG + G   N GGG+GG+ DG       E DDG+  DE      ++F  
Sbjct: 92  SDLEPELDDGDGGDENGN--NDGGGNGGNGDGGGGGGDGEGDDGE--DEADKAEEKEFGP 151

Query: 179 ELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSL 238
            L   KF + V+ E ++  + LP    +A +   +    ++R+L +        F+ RS 
Sbjct: 152 IL---KF-EEVMKETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSC 211

Query: 239 PQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVT 298
                     RMLADPSFL+K+  E A    CA + E++ R +    E++L   ++L   
Sbjct: 212 AM-----LRNRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGL 271

Query: 299 ACNAIVVWSLAPCRSYG-----NTFRF-DLQNTLQKLPNNIFEKSYPMREFDLQKRIHSF 358
             +  +V  LAP    G     +T  F DL+     LP+++FE   P  +F + +RI +F
Sbjct: 272 VVDVALVGLLAPYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATF 331

Query: 359 FYKAAELCMVGITAG-AAQGVLSNFLSSKKQERLS---VSVPTVSTNALGYGAFLGLYAN 418
           FYK      VG   G   QG+ +  +++K+  + S   V +P +  +A  +G FLGL +N
Sbjct: 332 FYKGLLYGSVGFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSN 391

Query: 419 LRYQLLCGFDRAM 422
            RYQ++ G +R +
Sbjct: 392 ARYQIINGLERVV 391

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BLAST of Csa6G411290.1 vs. Swiss-Prot
Match: RER6_ARATH (Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana GN=RER6 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.7e-16
Identity = 72/251 (28.69%), Postives = 109/251 (43.43%), Query Frame = 1


Query: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240
           FDR  +  V+N   +    LP   +   ++GLVS   +     +   P  +    R    
Sbjct: 418 FDRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQRF--- 477

Query: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC 300
              + F  R+LADP FL +L +E+A +I      + + RK+   +E D  + + +  +  
Sbjct: 478 ---QGFRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVV 537

Query: 301 NAIVVWSLAPCRSY--------GNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSF 360
           +   VW  AP  S+        G      L+  L  +P+N F+KS   RE++L  RI S 
Sbjct: 538 DFFTVWLPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASV 597

Query: 361 FYKAAELCMVGITAGAAQGVLSNFLSSK----KQERLSVSVPTVS---TNALGYGAFLGL 417
                +L  VG+ +  A    SN L+      K E +    P  S     A+ YG FLG 
Sbjct: 598 IVGGLKLAGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGT 657

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BLAST of Csa6G411290.1 vs. TrEMBL
Match: A0A0A0KDZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G411290 PE=4 SV=1)

HSP 1 Score: 1058.5 bits (2736), Expect = 2.7e-306
Identity = 534/534 (100.00%), Postives = 534/534 (100.00%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY 60
           MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY 60

Query: 61  GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK 120
           GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK
Sbjct: 61  GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK 120

Query: 121 SSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEEL 180
           SSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEEL
Sbjct: 121 SSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEEL 180

Query: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240
           FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ
Sbjct: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240

Query: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC 300
           GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC
Sbjct: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC 300

Query: 301 NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC 360
           NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC
Sbjct: 301 NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC 360

Query: 361 MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA 420
           MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA
Sbjct: 361 MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA 420

Query: 421 MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS 480
           MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS
Sbjct: 421 MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS 480

Query: 481 QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 535
           QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS
Sbjct: 481 QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 534

[Close]

BLAST of Csa6G411290.1 vs. TrEMBL
Match: M5XLU6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004314mg PE=4 SV=1)

HSP 1 Score: 819.7 bits (2116), Expect = 2.1e-234
Identity = 417/536 (77.80%), Postives = 466/536 (86.94%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLTTN-NLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVS 60
           MSHAVFQTAQIMPINTQL T   L  P  +++      R  L++KA  A+P   S+SG  
Sbjct: 1   MSHAVFQTAQIMPINTQLPTKPKLMGPIQLRMS----ERRGLLLKANCAAP---STSGFV 60

Query: 61  YGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQS 120
            GDS++ LERCF        V PS+A     FGPVMKG+YGA GAVTLEK KLD+SQKQS
Sbjct: 61  DGDSMALLERCF--------VGPSVA---GGFGPVMKGQYGALGAVTLEKGKLDMSQKQS 120

Query: 121 KSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEE 180
           KSSPE AIGGGGGDIGK+IN+GGGDGGDDDGDDDDY+D+FDDGDEGDEGGLFRRR FLEE
Sbjct: 121 KSSPETAIGGGGGDIGKRINNGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRMFLEE 180

Query: 181 LFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLP 240
           LFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGL+SSAQMV+FLA NARPTTTRFISR+LP
Sbjct: 181 LFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLISSAQMVKFLATNARPTTTRFISRALP 240

Query: 241 QGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTA 300
            GISRAFIGRMLADP+FLY+ LLEQAATIG + WWE+KNRK RIKQEWDLALINVLTVTA
Sbjct: 241 DGISRAFIGRMLADPAFLYRFLLEQAATIGSSVWWELKNRKGRIKQEWDLALINVLTVTA 300

Query: 301 CNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAEL 360
           CNAIVVWSLAPCRSYGNTF+FDLQNTLQKLPNNIFEKSYP+REFDLQKR+HSFFYKAAEL
Sbjct: 301 CNAIVVWSLAPCRSYGNTFKFDLQNTLQKLPNNIFEKSYPLREFDLQKRVHSFFYKAAEL 360

Query: 361 CMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDR 420
           CMVG+TAGA QG LSNFL+ KK+ RLSV++P+V  NALGYGAFLGLYANLRYQLLCGFDR
Sbjct: 361 CMVGLTAGAVQGSLSNFLAHKKEGRLSVTIPSVKANALGYGAFLGLYANLRYQLLCGFDR 420

Query: 421 AMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGV 480
           A++NHFDVIGVALFLS+ +R+LNVQ+GERSRLAWLG+EADPLV S +LL KVY+RPS  +
Sbjct: 421 AVMNHFDVIGVALFLSTTLRLLNVQVGERSRLAWLGVEADPLVDSDDLL-KVYSRPSDNL 480

Query: 481 SQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGE-SVPKARRKRIVRRKVTAGSS 535
            + SSKWFISKNAI+SGLGLLG+KQ   DSV++GE S PK RRKRIVR+KVTA S+
Sbjct: 481 ERPSSKWFISKNAIVSGLGLLGIKQGNADSVADGESSTPKTRRKRIVRKKVTASSA 517

[Close]

BLAST of Csa6G411290.1 vs. TrEMBL
Match: A0A067L459_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05041 PE=4 SV=1)

HSP 1 Score: 791.6 bits (2043), Expect = 6.1e-226
Identity = 404/549 (73.59%), Postives = 453/549 (82.51%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLTTNNLW--LPAVVKLGPSYRNRAV----------LVVKAFTA 60
           MSH VF TAQI    T   T  L   LP + +L P  +  A+          L++K    
Sbjct: 1   MSHLVFHTAQIPTATTAAKTLPLKPSLPPIPQLCPRQQLPAIQPVTCKLRRNLIIKC--- 60

Query: 61  SPPSSSSSGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSS---FGPVMKGKYGAFGAV 120
               SS S +   D++S LERCF     P      L  +SSS   FGPVMKGK+GAFGAV
Sbjct: 61  ----SSPSIIDGADAVSALERCF---LAPDAAPVDLGSASSSRGEFGPVMKGKFGAFGAV 120

Query: 121 TLEKSKLDLSQKQSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEG 180
           TLEK KLDL+QK+SK SPE+A+GGGGGDIGKKINHGGGDGGDDDGDDDDY+D+FDDGDEG
Sbjct: 121 TLEKGKLDLTQKESKVSPEVALGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEG 180

Query: 181 DEGGLFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVN 240
           DEGGLFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMV+FLA+N
Sbjct: 181 DEGGLFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVKFLAIN 240

Query: 241 ARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQ 300
           ARPTTTRFISR+LP+ ISRAFIGRMLADP+FLY+LLLEQAATIGC+ WWE+KNRKDRIK 
Sbjct: 241 ARPTTTRFISRTLPEAISRAFIGRMLADPAFLYRLLLEQAATIGCSVWWELKNRKDRIKH 300

Query: 301 EWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDL 360
           EWDLAL+NVLT T CNAIVVW+LAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYP+REFDL
Sbjct: 301 EWDLALVNVLTATVCNAIVVWTLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPLREFDL 360

Query: 361 QKRIHSFFYKAAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGL 420
           QKR+HSFFYKAAELC+VG++AGA QG LSN L+SKK++RLSV+VP VS  A GYGAFLGL
Sbjct: 361 QKRVHSFFYKAAELCVVGLSAGAIQGQLSNVLASKKKDRLSVTVPPVSNYARGYGAFLGL 420

Query: 421 YANLRYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSR 480
           YANLRYQLLCGFDRAM++HFDVIGVALF S+AMR+LNVQ+GE SRLAW+G EADPL QS 
Sbjct: 421 YANLRYQLLCGFDRAMVSHFDVIGVALFFSTAMRILNVQVGETSRLAWIGAEADPLAQSD 480

Query: 481 ELLEKVYNRPSQGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIV 535
            LL K YNRP + V+ SSSKWFISK   +SGLGLLG+KQ  VDSV  G S PK RRKR+V
Sbjct: 481 TLL-KAYNRPVEDVATSSSKWFISKKTFVSGLGLLGIKQGSVDSVDGGASAPKTRRKRVV 538

[Close]

BLAST of Csa6G411290.1 vs. TrEMBL
Match: A0A068TQ95_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014913001 PE=4 SV=1)

HSP 1 Score: 783.5 bits (2022), Expect = 1.7e-223
Identity = 401/531 (75.52%), Postives = 454/531 (85.50%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY 60
           MSH+ FQTAQIMPI T  +T  L   + + L P       L++KA + S  SSS      
Sbjct: 1   MSHSNFQTAQIMPIKTIPSTQTL--SSKISLLPPSTLCKPLLIKASSTSSSSSSGLVDRV 60

Query: 61  GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK 120
           GD++  LERCF+    PA VD + A  SSS  PVMK  YGAFGAVTLEKSKLD++QKQ+K
Sbjct: 61  GDTVPHLERCFQAL--PA-VDSAAASLSSS--PVMKKDYGAFGAVTLEKSKLDMTQKQAK 120

Query: 121 SSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEEL 180
           SSPELA GGGGGDIGKKINHGGGDGGDDDGDDD Y+D+FDDGDEGDEGGLFRRR   +EL
Sbjct: 121 SSPELATGGGGGDIGKKINHGGGDGGDDDGDDDSYFDDFDDGDEGDEGGLFRRRIVFQEL 180

Query: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240
           FDRKFVDAVL+EWQ+TMMDLPAGFRQAYEMGLVSSAQMV+FLA+NARPTTTRFISRSLPQ
Sbjct: 181 FDRKFVDAVLSEWQRTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQ 240

Query: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC 300
           G+SRAFIGRM+ADP+FLYKLLLEQA TIGC+ WWE+KNRK+RIK+EWDLALINVLTVTAC
Sbjct: 241 GLSRAFIGRMIADPAFLYKLLLEQATTIGCSVWWEVKNRKERIKKEWDLALINVLTVTAC 300

Query: 301 NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC 360
           NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFE SYPMREFDLQKR+HSFFYKAA LC
Sbjct: 301 NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEMSYPMREFDLQKRVHSFFYKAAGLC 360

Query: 361 MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA 420
           MVG+TAGA QG +SN  +SKK+ RLSV++P+VSTNALGYGAFLGLYANLRYQLLCGFDRA
Sbjct: 361 MVGLTAGAVQGAVSNLAASKKEGRLSVTIPSVSTNALGYGAFLGLYANLRYQLLCGFDRA 420

Query: 421 MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS 480
           ++N+FDVIGV LF S+A+RVLNVQLGE SRLAWLG+E DPL +S   L K YNRPS+ V+
Sbjct: 421 VVNYFDVIGVGLFFSTALRVLNVQLGETSRLAWLGVEVDPLAESD--LLKAYNRPSESVN 480

Query: 481 QSS-SKWFISKNAIISGLGLLGLKQSGVDSVSEGES-VPKARRKRIVRRKV 530
           ++S SKWFISKNAI+SGLGLLG+KQ   DS +EGE+  PK RRKR+VR+KV
Sbjct: 481 RTSPSKWFISKNAIVSGLGLLGIKQLEGDSTTEGEAPTPKVRRKRVVRKKV 522

[Close]

BLAST of Csa6G411290.1 vs. TrEMBL
Match: W9RMD6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024194 PE=4 SV=1)

HSP 1 Score: 783.5 bits (2022), Expect = 1.7e-223
Identity = 411/551 (74.59%), Postives = 462/551 (83.85%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPA-----VVKLGPS-------YRNRAV---LVVKA 60
           MSHA FQTAQIM INTQ       LP+     V  +GP+       +R  AV   L V A
Sbjct: 1   MSHAAFQTAQIMLINTQHPVKPKGLPSLPTPKVKPVGPTQLVVRKIWRGVAVPAPLKVSA 60

Query: 61  FTASPPSSSSSGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKG-KYGAFGA 120
            ++S  SSSSS V+  DS++ LERCF    PPA           + GPVMKG KYGA GA
Sbjct: 61  -SSSSSSSSSSAVAGEDSMTLLERCFVA--PPA---------PGTTGPVMKGGKYGALGA 120

Query: 121 VTLEKSKLDLSQKQSKSSPELAIGGGGGDIGKKINHGGGDGGDDDG-DDDDYYDEFDDGD 180
           VTLEKSKL+LSQKQSKSSPE A+GGGGGDIGK +NHGGGDGGDD+G DDD+Y+D+FD+GD
Sbjct: 121 VTLEKSKLNLSQKQSKSSPETAVGGGGGDIGKNLNHGGGDGGDDNGGDDDEYFDDFDEGD 180

Query: 181 EGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLA 240
           EGDEGGLFRRR  LEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMV+FLA
Sbjct: 181 EGDEGGLFRRRMVLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVKFLA 240

Query: 241 VNARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRI 300
           +NARPTT R I RSLP+GISRAFIGRM+ADP+FLY+LLLEQAATIG A  WE+KNR++RI
Sbjct: 241 INARPTTNRLIYRSLPEGISRAFIGRMIADPAFLYRLLLEQAATIGFAVRWELKNRRERI 300

Query: 301 KQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREF 360
           KQEWDLAL+NVLTV ACNAIVVWSLAPCRSYGNTF+FDLQNTLQKLPNNIFEKSYP+REF
Sbjct: 301 KQEWDLALVNVLTVAACNAIVVWSLAPCRSYGNTFQFDLQNTLQKLPNNIFEKSYPLREF 360

Query: 361 DLQKRIHSFFYKAAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFL 420
           DLQKR+HSFFYKAA+LCMVG+TAGA QG LSNFL+SKK+ RLSV++P+  TNALGYGAFL
Sbjct: 361 DLQKRVHSFFYKAAQLCMVGLTAGALQGSLSNFLASKKEGRLSVTIPSARTNALGYGAFL 420

Query: 421 GLYANLRYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQ 480
           GLYANLRYQLLCGFD+ MIN+FDVIGV LF S+A+R+LNVQLGE SRLAWLG+EADPL Q
Sbjct: 421 GLYANLRYQLLCGFDKTMINYFDVIGVGLFFSTALRILNVQLGESSRLAWLGVEADPLAQ 480

Query: 481 SRELLEKVYNRPSQGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGE-SVPKARRK 534
           S  LL K YNRPS+ V QSSSKWFISKNAIISGLGLLG+KQS VDS ++GE S P+ARRK
Sbjct: 481 SENLL-KAYNRPSENVDQSSSKWFISKNAIISGLGLLGIKQSNVDSAADGESSAPRARRK 538

[Close]

BLAST of Csa6G411290.1 vs. TAIR10
Match: AT5G24690.1 (AT5G24690.1 Protein of unknown function (DUF3411))

HSP 1 Score: 710.7 bits (1833), Expect = 6.9e-205
Identity = 355/489 (72.60%), Postives = 414/489 (84.66%), Query Frame = 1


Query: 53  SSSSGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFG------PVMKGKYGAFGAVT 112
           +SSS     DS+S LERC +    P+GV+   + SS SF       PVMKGK+G+ GAVT
Sbjct: 42  ASSSSFLVDDSVSGLERCLQL---PSGVELGTS-SSGSFSASTQMCPVMKGKFGSVGAVT 101

Query: 113 LEKSKLDLSQKQSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGD 172
           LEK KLD++QK S++SPE+A GGGGG+IGK IN+GGGDGGDD+GDDDDY+DEFDDGDEGD
Sbjct: 102 LEKGKLDMTQKISETSPEIATGGGGGNIGKSINNGGGDGGDDNGDDDDYFDEFDDGDEGD 161

Query: 173 EGGLFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNA 232
           + GLFRRR FL E+FDRKFVDAVLNEWQKTMMDLPAG RQAYEMGLVSSAQMV+FLA+NA
Sbjct: 162 DDGLFRRRMFLAEIFDRKFVDAVLNEWQKTMMDLPAGLRQAYEMGLVSSAQMVKFLAINA 221

Query: 233 RPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQE 292
           RPTTTR ISR+LPQG+SRAF+GRMLADP+FLYKLLLEQAAT+GC+ WWE+KNRK+R+K+E
Sbjct: 222 RPTTTRMISRALPQGLSRAFVGRMLADPAFLYKLLLEQAATVGCSVWWEVKNRKNRLKEE 281

Query: 293 WDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQ 352
           WDLALINVLTV+ACNA  VW LAPCRSYGNTFRFDLQNTLQKLPNN+FE SYP+REFDLQ
Sbjct: 282 WDLALINVLTVSACNAAAVWLLAPCRSYGNTFRFDLQNTLQKLPNNLFEMSYPLREFDLQ 341

Query: 353 KRIHSFFYKAAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLY 412
           KR HS FYKAAEL ++G+ AG  QG LSN L+ KK+ R+SV+VP++STNALGYGAFLG+Y
Sbjct: 342 KRFHSLFYKAAELSILGLAAGTLQGSLSNVLAGKKKNRVSVTVPSISTNALGYGAFLGIY 401

Query: 413 ANLRYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRE 472
           ANLRYQLLCGF+R + +HFDVIGVALF  +A+R++NVQLGE+SR  WLG+EADPL QS +
Sbjct: 402 ANLRYQLLCGFERGVSSHFDVIGVALFFGTALRIMNVQLGEKSRQVWLGVEADPLAQSDD 461

Query: 473 LLEKVYNRPS-QGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIV 532
           LL K YNRPS + V++ SSKWFISKNAI+S  GLLG KQ   DSVS+    PKARRKRIV
Sbjct: 462 LLAKAYNRPSEEAVAKPSSKWFISKNAIVS--GLLGKKQE--DSVSDSPP-PKARRKRIV 521

Query: 533 RRKVTAGSS 535
           R+KV A +S
Sbjct: 522 RKKVAASAS 521

[Close]

BLAST of Csa6G411290.1 vs. TAIR10
Match: AT5G22790.1 (AT5G22790.1 reticulata-related 1)

HSP 1 Score: 119.8 bits (299), Expect = 5.2e-27
Identity = 97/313 (30.99%), Postives = 151/313 (48.24%), Query Frame = 1


Query: 119 SKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLE 178
           S   PEL  G GG + G   N GGG+GG+ DG       E DDG+  DE      ++F  
Sbjct: 92  SDLEPELDDGDGGDENGN--NDGGGNGGNGDGGGGGGDGEGDDGE--DEADKAEEKEFGP 151

Query: 179 ELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSL 238
            L   KF + V+ E ++  + LP    +A +   +    ++R+L +        F+ RS 
Sbjct: 152 IL---KF-EEVMKETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSC 211

Query: 239 PQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVT 298
                     RMLADPSFL+K+  E A    CA + E++ R +    E++L   ++L   
Sbjct: 212 AM-----LRNRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGL 271

Query: 299 ACNAIVVWSLAPCRSYG-----NTFRF-DLQNTLQKLPNNIFEKSYPMREFDLQKRIHSF 358
             +  +V  LAP    G     +T  F DL+     LP+++FE   P  +F + +RI +F
Sbjct: 272 VVDVALVGLLAPYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATF 331

Query: 359 FYKAAELCMVGITAG-AAQGVLSNFLSSKKQERLS---VSVPTVSTNALGYGAFLGLYAN 418
           FYK      VG   G   QG+ +  +++K+  + S   V +P +  +A  +G FLGL +N
Sbjct: 332 FYKGLLYGSVGFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSN 391

Query: 419 LRYQLLCGFDRAM 422
            RYQ++ G +R +
Sbjct: 392 ARYQIINGLERVV 391

[Close]

BLAST of Csa6G411290.1 vs. TAIR10
Match: AT2G37860.3 (AT2G37860.3 Protein of unknown function (DUF3411))

HSP 1 Score: 99.0 bits (245), Expect = 9.5e-21
Identity = 80/302 (26.49%), Postives = 135/302 (44.70%), Query Frame = 1


Query: 129 GGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDA 188
           GGGG        GGG+GG+ DG+ +DY       +E + G + +              + 
Sbjct: 122 GGGG--------GGGNGGEGDGEGEDY-------EEKEFGPILK-------------FEE 181

Query: 189 VLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQGISRAFIG 248
           V+ E +     LP+   +A +   +    ++R+L + +      F  RS           
Sbjct: 182 VMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAM-----LRN 241

Query: 249 RMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSL 308
           RMLADPSFL+K+  E      CA   E++ R      E++L + ++L  T  N  +V  L
Sbjct: 242 RMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGML 301

Query: 309 APCRSYGNT-----FRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCMVG 368
           AP   +G       F   +      LP+++FE   P   F  Q+R+ ++FYK      VG
Sbjct: 302 APYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVG 361

Query: 369 ITAG-AAQGVLSNFLSSKK---QERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDR 422
              G   QG+ +  +++K+   +   ++ VP +  +A  +G FL + +N RYQ++ G +R
Sbjct: 362 FGCGIVGQGIANLIMTAKRNINKSEENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLER 390

[Close]

BLAST of Csa6G411290.1 vs. TAIR10
Match: AT3G56140.1 (AT3G56140.1 Protein of unknown function (DUF399 and DUF3411))

HSP 1 Score: 89.0 bits (219), Expect = 9.8e-18
Identity = 72/251 (28.69%), Postives = 109/251 (43.43%), Query Frame = 1


Query: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240
           FDR  +  V+N   +    LP   +   ++GLVS   +     +   P  +    R    
Sbjct: 418 FDRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQRF--- 477

Query: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC 300
              + F  R+LADP FL +L +E+A +I      + + RK+   +E D  + + +  +  
Sbjct: 478 ---QGFRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVV 537

Query: 301 NAIVVWSLAPCRSY--------GNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSF 360
           +   VW  AP  S+        G      L+  L  +P+N F+KS   RE++L  RI S 
Sbjct: 538 DFFTVWLPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASV 597

Query: 361 FYKAAELCMVGITAGAAQGVLSNFLSSK----KQERLSVSVPTVS---TNALGYGAFLGL 417
                +L  VG+ +  A    SN L+      K E +    P  S     A+ YG FLG 
Sbjct: 598 IVGGLKLAGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGT 657

[Close]

BLAST of Csa6G411290.1 vs. TAIR10
Match: AT2G40400.1 (AT2G40400.1 Protein of unknown function (DUF399 and DUF3411))

HSP 1 Score: 87.4 bits (215), Expect = 2.9e-17
Identity = 84/337 (24.93%), Postives = 149/337 (44.21%), Query Frame = 1


Query: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240
           FDR  +  V+N   +    LP   ++  ++GLVS   +  F  +   P  +    R    
Sbjct: 409 FDRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRF--- 468

Query: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC 300
              + F  R+LADP FL +L +E+A +I      + + RK+   +E D  + + +  +  
Sbjct: 469 ---QGFRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVV 528

Query: 301 NAIVVWSLAPCRSY--------GNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSF 360
           +   VW  AP  S+        G      L+  L  +P+N F+KS   +E+ L  RI S 
Sbjct: 529 DFFTVWLPAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASV 588

Query: 361 FYKAAELCMVGITAG-AAQGVLSNFLSSKKQERLSVSV-------PTVSTNALGYGAFLG 420
                +L  VG+ +  AA G  +   + +K  +  + V       P + T AL YG +LG
Sbjct: 589 IIGGLKLAGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKT-ALVYGGYLG 648

Query: 421 LYANLRYQLLCGFDRAMINHFDVIG----VALFLSSAMRVLNVQLGERSRLAWLGIEADP 480
             +N+RYQ++ G     I+  D +     +   +S  +RV N   G +    W+ +    
Sbjct: 649 TSSNIRYQIIAGLIEHRIS--DELSSQPLLVNMISFVVRVANSYFGTQQ---WIDLARST 708

Query: 481 LVQSRELLEKVYNRPSQGVSQSSSKWFISKNAIISGL 498
            +Q+++ +    N+  +  SQS+ ++  ++ A +  L
Sbjct: 709 GLQTQKSV-TTSNQIPEVASQSTVEYSTTEEASMDDL 732

[Close]

BLAST of Csa6G411290.1 vs. NCBI nr
Match: gi|449444691|ref|XP_004140107.1| (PREDICTED: uncharacterized protein LOC101205574 [Cucumis sativus])

HSP 1 Score: 1058.5 bits (2736), Expect = 3.8e-306
Identity = 534/534 (100.00%), Postives = 534/534 (100.00%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY 60
           MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY 60

Query: 61  GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK 120
           GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK
Sbjct: 61  GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK 120

Query: 121 SSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEEL 180
           SSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEEL
Sbjct: 121 SSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEEL 180

Query: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240
           FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ
Sbjct: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240

Query: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC 300
           GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC
Sbjct: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC 300

Query: 301 NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC 360
           NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC
Sbjct: 301 NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC 360

Query: 361 MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA 420
           MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA
Sbjct: 361 MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA 420

Query: 421 MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS 480
           MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS
Sbjct: 421 MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS 480

Query: 481 QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 535
           QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS
Sbjct: 481 QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 534

[Close]

BLAST of Csa6G411290.1 vs. NCBI nr
Match: gi|659097051|ref|XP_008449416.1| (PREDICTED: uncharacterized protein LOC103491309 [Cucumis melo])

HSP 1 Score: 1006.5 bits (2601), Expect = 1.7e-290
Identity = 506/537 (94.23%), Postives = 521/537 (97.02%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSS---SSSG 60
           MSHAVFQTAQIMPINTQLTTN LWLP+VVKLGPSYRNRAVLVVKAFT S PSS   SSSG
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNKLWLPSVVKLGPSYRNRAVLVVKAFTTSSPSSPSSSSSG 60

Query: 61  VSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQK 120
           V YGDSI+FLERCFET   PAG DP LA+SSSSFGPVMKG++GA G+VTLEKSKLDLSQK
Sbjct: 61  VPYGDSIAFLERCFETPSAPAGSDPFLAISSSSFGPVMKGQFGALGSVTLEKSKLDLSQK 120

Query: 121 QSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFL 180
           QSKSSPE AIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFL
Sbjct: 121 QSKSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFL 180

Query: 181 EELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRS 240
           EELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISR+
Sbjct: 181 EELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRA 240

Query: 241 LPQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTV 300
           LPQGISRAFIGRMLADP+FLY+LLLEQAATIGC+AWWEIKNRKDRIKQEWDLALINVLTV
Sbjct: 241 LPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTV 300

Query: 301 TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA 360
           TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA
Sbjct: 301 TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA 360

Query: 361 ELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF 420
           ELC+VGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF
Sbjct: 361 ELCLVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF 420

Query: 421 DRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQ 480
           DRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELL+KVYNRPS+
Sbjct: 421 DRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLQKVYNRPSE 480

Query: 481 GVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 535
            ++QSSSKWFISKNAIISGLGLLGLKQSG DSVSEGESVPKARRKRIVRRKVTAGSS
Sbjct: 481 DINQSSSKWFISKNAIISGLGLLGLKQSGADSVSEGESVPKARRKRIVRRKVTAGSS 537

[Close]

BLAST of Csa6G411290.1 vs. NCBI nr
Match: gi|1009151665|ref|XP_015893670.1| (PREDICTED: protein RETICULATA-RELATED 1, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 836.6 bits (2160), Expect = 2.4e-239
Identity = 429/553 (77.58%), Postives = 468/553 (84.63%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSY---------------RNRAVLVVKA 60
           MSHAVFQTAQIMPINTQL   +  L +V    P                   R   VVKA
Sbjct: 1   MSHAVFQTAQIMPINTQLPVKHNSLSSVSLSSPKLVCPNQLVTAQPAGGKHRRGGPVVKA 60

Query: 61  FTASPPSSSSS----GVSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGA 120
           F A PPSSSSS    G+  GDS++ LERCF       G     A +SSS GPVMKG+YGA
Sbjct: 61  FVAPPPSSSSSSSSGGLVDGDSMTLLERCFAAPSVSGG-----APASSSLGPVMKGQYGA 120

Query: 121 FGAVTLEKSKLDLSQKQSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDD 180
           FGAVTLEK KLD+SQKQSKSSPE A+GGGGGDIGKKINHGGGDGGDDDGDDDDY+D+FDD
Sbjct: 121 FGAVTLEKGKLDMSQKQSKSSPETAVGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDD 180

Query: 181 GDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRF 240
           GDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKT MDLPAGFRQAYEMGLVSSAQMV+F
Sbjct: 181 GDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTFMDLPAGFRQAYEMGLVSSAQMVKF 240

Query: 241 LAVNARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKD 300
           LA+NARPTTTRFISRSLPQ +SRAFIGRMLADP+FLYKLLLEQAATIG + W E+KNRKD
Sbjct: 241 LAINARPTTTRFISRSLPQAVSRAFIGRMLADPAFLYKLLLEQAATIGFSVWSELKNRKD 300

Query: 301 RIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMR 360
           RIKQEWDLAL+NVLTV ACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFE+SYP+R
Sbjct: 301 RIKQEWDLALVNVLTVAACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPLR 360

Query: 361 EFDLQKRIHSFFYKAAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGA 420
           EFDLQKRIHSFFYKAAELCMVG+TAGA QG LSN+L+SKK+ RLSVS+P+ STNALGYGA
Sbjct: 361 EFDLQKRIHSFFYKAAELCMVGLTAGAVQGSLSNYLASKKEGRLSVSIPSTSTNALGYGA 420

Query: 421 FLGLYANLRYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPL 480
           FLGLYAN+RYQLLCG+DRAM NHFDVIGVALF S+A+RVLNVQLGE SRLAWLG+E DPL
Sbjct: 421 FLGLYANMRYQLLCGYDRAMFNHFDVIGVALFFSTALRVLNVQLGEASRLAWLGVEPDPL 480

Query: 481 VQSRELLEKVYNRPSQGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGES-VPKAR 534
             S +LL KVYNRPSQ   Q SSKWFISK+AI+SGLGLLG+KQ  VDSV++GES  P+AR
Sbjct: 481 AHSDDLL-KVYNRPSQDADQLSSKWFISKSAIVSGLGLLGIKQGNVDSVADGESPAPRAR 540

[Close]

BLAST of Csa6G411290.1 vs. NCBI nr
Match: gi|596287086|ref|XP_007225720.1| (hypothetical protein PRUPE_ppa004314mg [Prunus persica])

HSP 1 Score: 819.7 bits (2116), Expect = 3.0e-234
Identity = 417/536 (77.80%), Postives = 466/536 (86.94%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLTTN-NLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVS 60
           MSHAVFQTAQIMPINTQL T   L  P  +++      R  L++KA  A+P   S+SG  
Sbjct: 1   MSHAVFQTAQIMPINTQLPTKPKLMGPIQLRMS----ERRGLLLKANCAAP---STSGFV 60

Query: 61  YGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQS 120
            GDS++ LERCF        V PS+A     FGPVMKG+YGA GAVTLEK KLD+SQKQS
Sbjct: 61  DGDSMALLERCF--------VGPSVA---GGFGPVMKGQYGALGAVTLEKGKLDMSQKQS 120

Query: 121 KSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEE 180
           KSSPE AIGGGGGDIGK+IN+GGGDGGDDDGDDDDY+D+FDDGDEGDEGGLFRRR FLEE
Sbjct: 121 KSSPETAIGGGGGDIGKRINNGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRMFLEE 180

Query: 181 LFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLP 240
           LFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGL+SSAQMV+FLA NARPTTTRFISR+LP
Sbjct: 181 LFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLISSAQMVKFLATNARPTTTRFISRALP 240

Query: 241 QGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTA 300
            GISRAFIGRMLADP+FLY+ LLEQAATIG + WWE+KNRK RIKQEWDLALINVLTVTA
Sbjct: 241 DGISRAFIGRMLADPAFLYRFLLEQAATIGSSVWWELKNRKGRIKQEWDLALINVLTVTA 300

Query: 301 CNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAEL 360
           CNAIVVWSLAPCRSYGNTF+FDLQNTLQKLPNNIFEKSYP+REFDLQKR+HSFFYKAAEL
Sbjct: 301 CNAIVVWSLAPCRSYGNTFKFDLQNTLQKLPNNIFEKSYPLREFDLQKRVHSFFYKAAEL 360

Query: 361 CMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDR 420
           CMVG+TAGA QG LSNFL+ KK+ RLSV++P+V  NALGYGAFLGLYANLRYQLLCGFDR
Sbjct: 361 CMVGLTAGAVQGSLSNFLAHKKEGRLSVTIPSVKANALGYGAFLGLYANLRYQLLCGFDR 420

Query: 421 AMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGV 480
           A++NHFDVIGVALFLS+ +R+LNVQ+GERSRLAWLG+EADPLV S +LL KVY+RPS  +
Sbjct: 421 AVMNHFDVIGVALFLSTTLRLLNVQVGERSRLAWLGVEADPLVDSDDLL-KVYSRPSDNL 480

Query: 481 SQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGE-SVPKARRKRIVRRKVTAGSS 535
            + SSKWFISKNAI+SGLGLLG+KQ   DSV++GE S PK RRKRIVR+KVTA S+
Sbjct: 481 ERPSSKWFISKNAIVSGLGLLGIKQGNADSVADGESSTPKTRRKRIVRKKVTASSA 517

[Close]

BLAST of Csa6G411290.1 vs. NCBI nr
Match: gi|645223799|ref|XP_008218806.1| (PREDICTED: uncharacterized protein LOC103319089 [Prunus mume])

HSP 1 Score: 817.8 bits (2111), Expect = 1.1e-233
Identity = 416/536 (77.61%), Postives = 465/536 (86.75%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLTTN-NLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVS 60
           MSHAVFQTAQIMPINTQL T   L  P  +++      R  LV+KA  A+P   S+SG  
Sbjct: 1   MSHAVFQTAQIMPINTQLPTKPKLMGPIQLRMS----ERRGLVLKANCAAP---STSGFV 60

Query: 61  YGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQS 120
            GDS++ LERCF        V PS+   +  FGPVMKG+YGA GAVTLEK KLD+SQKQS
Sbjct: 61  DGDSMALLERCF--------VGPSV---TGGFGPVMKGQYGALGAVTLEKGKLDMSQKQS 120

Query: 121 KSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEE 180
           KSSPE AIGGGGGDIGK+IN+GGGDGGDDDGDDDDY+D+FDDGDEGDEGGLFRRR FLEE
Sbjct: 121 KSSPETAIGGGGGDIGKRINNGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRMFLEE 180

Query: 181 LFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLP 240
           LFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGL+SSAQMV+FLA NARPTTTRFISR+LP
Sbjct: 181 LFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLISSAQMVKFLATNARPTTTRFISRALP 240

Query: 241 QGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTA 300
            GISRAFIGRMLADP+FLY+ LLEQAATIG + WWE+KNRK RIKQEWDLALINVLTVTA
Sbjct: 241 DGISRAFIGRMLADPAFLYRFLLEQAATIGSSVWWELKNRKGRIKQEWDLALINVLTVTA 300

Query: 301 CNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAEL 360
           CNAIVVWSLAPCRSYGNTF+FDLQNTLQKLPNNIFEKSYP+REFDLQKR+HSFFYKAAEL
Sbjct: 301 CNAIVVWSLAPCRSYGNTFKFDLQNTLQKLPNNIFEKSYPLREFDLQKRVHSFFYKAAEL 360

Query: 361 CMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDR 420
           CMVG+TAGA QG LSNFL+ KK+ RLSV++P+V  NALGYGAFLGLYANLRYQLLCGFDR
Sbjct: 361 CMVGLTAGAVQGSLSNFLAHKKEGRLSVTIPSVKANALGYGAFLGLYANLRYQLLCGFDR 420

Query: 421 AMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGV 480
           A++NHFDVIGV LFLS+ +R+LNVQ+GERSRLAWLG+EADPLV S +LL KVY+RPS  +
Sbjct: 421 AVMNHFDVIGVPLFLSTTLRLLNVQVGERSRLAWLGVEADPLVDSDDLL-KVYSRPSDNL 480

Query: 481 SQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGE-SVPKARRKRIVRRKVTAGSS 535
            + SSKWFISKNAI+SGLGLLG+KQ   DSV++GE S PK RRKRIVR+KVTA S+
Sbjct: 481 ERPSSKWFISKNAIVSGLGLLGIKQGNADSVADGESSTPKTRRKRIVRKKVTASSA 517

The following BLAST results are available for this feature:

BLAST of Csa6G411290.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RER1_ARATH	9.2e-26	30.99	Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana GN=RER1 PE=1...	[more]
RER6_ARATH	1.7e-16	28.69	Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana GN=RER6 PE=2...	[more]

BLAST of Csa6G411290.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDZ4_CUCSA	2.7e-306	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G411290 PE=4 SV=1	[more]
M5XLU6_PRUPE	2.1e-234	77.80	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004314mg PE=4 SV=1	[more]
A0A067L459_JATCU	6.1e-226	73.59	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05041 PE=4 SV=1	[more]
A0A068TQ95_COFCA	1.7e-223	75.52	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014913001 PE=4 SV=1	[more]
W9RMD6_9ROSA	1.7e-223	74.59	Uncharacterized protein OS=Morus notabilis GN=L484_024194 PE=4 SV=1	[more]

BLAST of Csa6G411290.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24690.1	6.9e-205	72.60	Protein of unknown function (DUF3411)	[more]
AT5G22790.1	5.2e-27	30.99	reticulata-related 1	[more]
AT2G37860.3	9.5e-21	26.49	Protein of unknown function (DUF3411)	[more]
AT3G56140.1	9.8e-18	28.69	Protein of unknown function (DUF399 and DUF3411)	[more]
AT2G40400.1	2.9e-17	24.93	Protein of unknown function (DUF399 and DUF3411)	[more]

BLAST of Csa6G411290.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444691\|ref\|XP_004140107.1\|	3.8e-306	100.00	PREDICTED: uncharacterized protein LOC101205574 [Cucumis sativus]	[more]
gi\|659097051\|ref\|XP_008449416.1\|	1.7e-290	94.23	PREDICTED: uncharacterized protein LOC103491309 [Cucumis melo]	[more]
gi\|1009151665\|ref\|XP_015893670.1\|	2.4e-239	77.58	PREDICTED: protein RETICULATA-RELATED 1, chloroplastic [Ziziphus jujuba]	[more]
gi\|596287086\|ref\|XP_007225720.1\|	3.0e-234	77.80	hypothetical protein PRUPE_ppa004314mg [Prunus persica]	[more]
gi\|645223799\|ref\|XP_008218806.1\|	1.1e-233	77.61	PREDICTED: uncharacterized protein LOC103319089 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR021825	RETICULATA-related

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa6G411290	Csa6G411290	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa6G411290.1	Csa6G411290.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G411290.1.utr5p1	Csa6G411290.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G411290.1.cds1	Csa6G411290.1.cds1	CDS
Csa6G411290.1.cds2	Csa6G411290.1.cds2	CDS
Csa6G411290.1.cds3	Csa6G411290.1.cds3	CDS
Csa6G411290.1.cds4	Csa6G411290.1.cds4	CDS
Csa6G411290.1.cds5	Csa6G411290.1.cds5	CDS
Csa6G411290.1.cds6	Csa6G411290.1.cds6	CDS
Csa6G411290.1.cds7	Csa6G411290.1.cds7	CDS
Csa6G411290.1.cds8	Csa6G411290.1.cds8	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G411290.1.utr3p1	Csa6G411290.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021825	Protein RETICULATA-related	PFAM	PF11891	DUF3411	coord: 248..416 score: 3.6
None	No IPR available	PANTHER	PTHR31038	FAMILY NOT NAMED	coord: 1..532 score:
None	No IPR available	PANTHER	PTHR31038:SF2	SUBFAMILY NOT NAMED	coord: 1..532 score: